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authortota <tota@FreeBSD.org>2016-07-14 17:26:42 +0800
committertota <tota@FreeBSD.org>2016-07-14 17:26:42 +0800
commite9230b862218c9eaf5ac8852bddbc90a4795d9e3 (patch)
tree7ef163279eee2de153f74338c96901280617ee57
parent4ecff730676e9cc78b42b6f26cb03055d2e03998 (diff)
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- Add new port: math/R-cran-mcmc
Simulates continuous distributions of random vectors using Markov chain Monte Carlo (MCMC). Users specify the distribution by an R function that evaluates the log unnormalized density. Algorithms are random walk Metropolis algorithm (function metrop), simulated tempering (function temper), and morphometric random walk Metropolis (Johnson and Geyer, Annals of Statistics, 2012, function morph.metrop), which achieves geometric ergodicity by change of variable. WWW: https://cran.r-project.org/web/packages/mcmc/
-rw-r--r--math/Makefile1
-rw-r--r--math/R-cran-mcmc/Makefile16
-rw-r--r--math/R-cran-mcmc/distinfo3
-rw-r--r--math/R-cran-mcmc/pkg-descr9
4 files changed, 29 insertions, 0 deletions
diff --git a/math/Makefile b/math/Makefile
index 7ff03313cfb5..21285bb5a4fd 100644
--- a/math/Makefile
+++ b/math/Makefile
@@ -46,6 +46,7 @@
SUBDIR += R-cran-lazyeval
SUBDIR += R-cran-lme4
SUBDIR += R-cran-maxLik
+ SUBDIR += R-cran-mcmc
SUBDIR += R-cran-memisc
SUBDIR += R-cran-minqa
SUBDIR += R-cran-miscTools
diff --git a/math/R-cran-mcmc/Makefile b/math/R-cran-mcmc/Makefile
new file mode 100644
index 000000000000..b09964d87192
--- /dev/null
+++ b/math/R-cran-mcmc/Makefile
@@ -0,0 +1,16 @@
+# Created by: TAKATSU Tomonari <tota@FreeBSD.org>
+# $FreeBSD$
+
+PORTNAME= mcmc
+DISTVERSION= 0.9-4
+CATEGORIES= math
+DISTNAME= ${PORTNAME}_${DISTVERSION}
+
+MAINTAINER= tota@FreeBSD.org
+COMMENT= Markov Chain Monte Carlo
+
+LICENSE= MIT
+
+USES= cran:compiles,auto-plist
+
+.include <bsd.port.mk>
diff --git a/math/R-cran-mcmc/distinfo b/math/R-cran-mcmc/distinfo
new file mode 100644
index 000000000000..b2da7e6c9723
--- /dev/null
+++ b/math/R-cran-mcmc/distinfo
@@ -0,0 +1,3 @@
+TIMESTAMP = 1468312445
+SHA256 (mcmc_0.9-4.tar.gz) = ca4e234d5c5240c5fb0da9dc7dade49f10c743c9681a05feb711b9468c0448f3
+SIZE (mcmc_0.9-4.tar.gz) = 1921404
diff --git a/math/R-cran-mcmc/pkg-descr b/math/R-cran-mcmc/pkg-descr
new file mode 100644
index 000000000000..e5c8c248c688
--- /dev/null
+++ b/math/R-cran-mcmc/pkg-descr
@@ -0,0 +1,9 @@
+Simulates continuous distributions of random vectors using Markov
+chain Monte Carlo (MCMC). Users specify the distribution by an R
+function that evaluates the log unnormalized density. Algorithms
+are random walk Metropolis algorithm (function metrop), simulated
+tempering (function temper), and morphometric random walk Metropolis
+(Johnson and Geyer, Annals of Statistics, 2012, function morph.metrop),
+which achieves geometric ergodicity by change of variable.
+
+WWW: https://cran.r-project.org/web/packages/mcmc/