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authordanilo <danilo@FreeBSD.org>2014-04-13 08:17:45 +0800
committerdanilo <danilo@FreeBSD.org>2014-04-13 08:17:45 +0800
commit9a3ee8babdfba026d27046c680fe4a22d144aea0 (patch)
treefd19deb2f65455d7e3f2789d17cd9aec2e92aa4e
parent5e018b3010cc37d2fc6f3548ab1cd3c8f5f76b98 (diff)
downloadfreebsd-ports-gnome-9a3ee8babdfba026d27046c680fe4a22d144aea0.tar.gz
freebsd-ports-gnome-9a3ee8babdfba026d27046c680fe4a22d144aea0.tar.zst
freebsd-ports-gnome-9a3ee8babdfba026d27046c680fe4a22d144aea0.zip
- Update openmpi from 1.6.5 to 1.8 (new stable version)
- Convert USE_BZIP2 to USES
-rw-r--r--math/parmgridgen/Makefile2
-rw-r--r--net/openmpi/Makefile10
-rw-r--r--net/openmpi/distinfo4
-rw-r--r--net/openmpi/pkg-plist735
-rw-r--r--science/dlpoly-classic/Makefile2
-rw-r--r--science/fvcom-mpi/Makefile1
-rw-r--r--science/meep/Makefile2
-rw-r--r--science/pnetcdf/Makefile2
8 files changed, 439 insertions, 319 deletions
diff --git a/math/parmgridgen/Makefile b/math/parmgridgen/Makefile
index 20b71dfca184..10be4688f878 100644
--- a/math/parmgridgen/Makefile
+++ b/math/parmgridgen/Makefile
@@ -3,7 +3,7 @@
PORTNAME= parmgridgen
PORTVERSION= 1.0
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math science
MASTER_SITES= http://www.mgnet.org/mgnet/Codes/parmgridgen/ \
http://www-users.cs.umn.edu/~moulitsa/download/ \
diff --git a/net/openmpi/Makefile b/net/openmpi/Makefile
index bac8abf6ec45..78a3e77d5463 100644
--- a/net/openmpi/Makefile
+++ b/net/openmpi/Makefile
@@ -4,10 +4,9 @@
# - etc/*.sample support
PORTNAME= openmpi
-DISTVERSION= 1.6.5
-PORTREVISION= 3
+DISTVERSION= 1.8
CATEGORIES= net parallel
-MASTER_SITES= http://www.open-mpi.org/software/ompi/v1.6/downloads/
+MASTER_SITES= http://www.open-mpi.org/software/ompi/v1.8/downloads/
MAINTAINER= danilo@FreeBSD.org
COMMENT= High Performance Message Passing Library
@@ -18,9 +17,8 @@ LIB_DEPENDS= libexecinfo.so:${PORTSDIR}/devel/libexecinfo \
CONFLICTS= openmpi-devel-1.7.*
-USE_BZIP2= yes
HAS_CONFIGURE= yes
-USES= fortran gmake pkgconfig
+USES= fortran gmake pkgconfig tar:bzip2
MPIBASE?= mpi
MPIDIR?= ${MPIBASE}/${UNIQUENAME}
@@ -64,8 +62,6 @@ SLURM_CONFIGURE_WITH= slurm
SLURM_LIB_DEPENDS= libslurm.so:${PORTSDIR}/sysutils/slurm-hpc
SLURM_PLIST_FILES= ${MPIDIR}/lib/openmpi/mca_ess_slurm.la \
${MPIDIR}/lib/openmpi/mca_ess_slurm.so \
- ${MPIDIR}/lib/openmpi/mca_ess_slurmd.la \
- ${MPIDIR}/lib/openmpi/mca_ess_slurmd.so \
${MPIDIR}/lib/openmpi/mca_plm_slurm.la \
${MPIDIR}/lib/openmpi/mca_plm_slurm.so \
${MPIDIR}/lib/openmpi/mca_ras_slurm.la \
diff --git a/net/openmpi/distinfo b/net/openmpi/distinfo
index 665fe0d895b7..c58113ba43c9 100644
--- a/net/openmpi/distinfo
+++ b/net/openmpi/distinfo
@@ -1,2 +1,2 @@
-SHA256 (openmpi-1.6.5.tar.bz2) = fe37bab89b5ef234e0ac82dc798282c2ab08900bf564a1ec27239d3f1ad1fc85
-SIZE (openmpi-1.6.5.tar.bz2) = 10943881
+SHA256 (openmpi-1.8.tar.bz2) = 35d5db86f49c0c64573b2eaf6d51c94ed8a06a9bb23dda475e602288f05e4ecf
+SIZE (openmpi-1.8.tar.bz2) = 13291595
diff --git a/net/openmpi/pkg-plist b/net/openmpi/pkg-plist
index 84eb9095ccdc..acc5c1df0bec 100644
--- a/net/openmpi/pkg-plist
+++ b/net/openmpi/pkg-plist
@@ -5,37 +5,179 @@
%%MPIDIR%%/bin/mpiexec
%%MPIDIR%%/bin/mpif77
%%MPIDIR%%/bin/mpif90
+%%MPIDIR%%/bin/mpifort
%%MPIDIR%%/bin/mpirun
%%MPIDIR%%/bin/ompi-clean
-%%MPIDIR%%/bin/ompi-iof
-%%MPIDIR%%/bin/ompi-probe
-%%MPIDIR%%/bin/ompi-profiler
%%MPIDIR%%/bin/ompi-ps
%%MPIDIR%%/bin/ompi-server
%%MPIDIR%%/bin/ompi-top
%%MPIDIR%%/bin/ompi_info
%%MPIDIR%%/bin/opal_wrapper
-%%MPIDIR%%/bin/orte-bootproxy.sh
%%MPIDIR%%/bin/orte-clean
-%%MPIDIR%%/bin/orte-iof
+%%MPIDIR%%/bin/orte-info
%%MPIDIR%%/bin/orte-ps
+%%MPIDIR%%/bin/orte-server
%%MPIDIR%%/bin/orte-top
-%%MPIDIR%%/bin/orteCC
-%%MPIDIR%%/bin/orte_wrapper_script
-%%MPIDIR%%/bin/ortec++
%%MPIDIR%%/bin/ortecc
-%%MPIDIR%%/bin/orted
%%MPIDIR%%/bin/orterun
-%%MPIDIR%%/etc/openmpi-default-hostfile
-%%MPIDIR%%/etc/openmpi-mca-params.conf
-%%MPIDIR%%/etc/openmpi-totalview.tcl
+%%MPIDIR%%/bin/orted
+%%VT%%%%MPIDIR%%/bin/mpiCC-vt
+%%VT%%%%MPIDIR%%/bin/mpic++-vt
+%%VT%%%%MPIDIR%%/bin/mpicc-vt
+%%VT%%%%MPIDIR%%/bin/mpicxx-vt
+%%VT%%%%MPIDIR%%/bin/mpif77-vt
+%%VT%%%%MPIDIR%%/bin/mpif90-vt
+%%VT%%%%MPIDIR%%/bin/mpifort-vt
+%%VT%%%%MPIDIR%%/bin/otfaux
+%%VT%%%%MPIDIR%%/bin/otfcompress
+%%VT%%%%MPIDIR%%/bin/otfconfig
+%%VT%%%%MPIDIR%%/bin/otfdecompress
+%%VT%%%%MPIDIR%%/bin/otfinfo
+%%VT%%%%MPIDIR%%/bin/otfmerge
+%%VT%%%%MPIDIR%%/bin/otfmerge-mpi
+%%VT%%%%MPIDIR%%/bin/otfprint
+%%VT%%%%MPIDIR%%/bin/otfprofile
+%%VT%%%%MPIDIR%%/bin/otfprofile-mpi
+%%VT%%%%MPIDIR%%/bin/otfshrink
+%%VT%%%%MPIDIR%%/bin/vtCC
+%%VT%%%%MPIDIR%%/bin/vtc++
+%%VT%%%%MPIDIR%%/bin/vtcc
+%%VT%%%%MPIDIR%%/bin/vtcxx
+%%VT%%%%MPIDIR%%/bin/vtf77
+%%VT%%%%MPIDIR%%/bin/vtf90
+%%VT%%%%MPIDIR%%/bin/vtfilter
+%%VT%%%%MPIDIR%%/bin/vtfilter-mpi
+%%VT%%%%MPIDIR%%/bin/vtfiltergen
+%%VT%%%%MPIDIR%%/bin/vtfiltergen-mpi
+%%VT%%%%MPIDIR%%/bin/vtfort
+%%VT%%%%MPIDIR%%/bin/vtrun
+%%VT%%%%MPIDIR%%/bin/vtsetup
+%%VT%%%%MPIDIR%%/bin/vtsetup.jar
+%%VT%%%%MPIDIR%%/bin/vtunify
+%%VT%%%%MPIDIR%%/bin/vtunify-mpi
+%%VT%%%%MPIDIR%%/bin/vtwrapper
+%%VT%%%%MPIDIR%%/etc/vtsetup-config.dtd
+%%VT%%%%MPIDIR%%/etc/vtsetup-config.xml
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTFAUX_MsgMatching.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTFAUX_State.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTFAUX_Thumbnail.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_CopyHandler.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_CopyHandler_stream.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Definitions.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Errno.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_File.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_FileManager.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_File_iofsl.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Filenames.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_HandlerArray.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_KeyValue.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_MasterControl.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_RBuffer.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_RStream.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Reader.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Version.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_WBuffer.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_WStream.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Writer.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_inttypes.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_inttypes_unix.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/otf.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/otfaux.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_inttypes.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user.inc
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_comment.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_comment.inc
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_control.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_control.inc
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_count.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_count.inc
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_marker.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_marker.inc
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_message.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_message.inc
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_region.h
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_region.inc
+%%VT%%%%MPIDIR%%/include/vampirtrace/vt_wrap_pthread.h
+%%VT%%%%MPIDIR%%/lib/libopen-trace-format.a
+%%VT%%%%MPIDIR%%/lib/libopen-trace-format.la
+%%VT%%%%MPIDIR%%/lib/libopen-trace-format.so
+%%VT%%%%MPIDIR%%/lib/libopen-trace-format.so.1
+%%VT%%%%MPIDIR%%/lib/libotfaux.a
+%%VT%%%%MPIDIR%%/lib/libotfaux.la
+%%VT%%%%MPIDIR%%/lib/libotfaux.so
+%%VT%%%%MPIDIR%%/lib/libotfaux.so.0
+%%VT%%%%MPIDIR%%/lib/libvt-hyb.a
+%%VT%%%%MPIDIR%%/lib/libvt-hyb.la
+%%VT%%%%MPIDIR%%/lib/libvt-hyb.so
+%%VT%%%%MPIDIR%%/lib/libvt-hyb.so.0
+%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.a
+%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.la
+%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.so
+%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.so.0
+%%VT%%%%MPIDIR%%/lib/libvt-mpi.a
+%%VT%%%%MPIDIR%%/lib/libvt-mpi.la
+%%VT%%%%MPIDIR%%/lib/libvt-mpi.so
+%%VT%%%%MPIDIR%%/lib/libvt-mpi.so.0
+%%VT%%%%MPIDIR%%/lib/libvt-mt.a
+%%VT%%%%MPIDIR%%/lib/libvt-mt.la
+%%VT%%%%MPIDIR%%/lib/libvt-mt.so
+%%VT%%%%MPIDIR%%/lib/libvt-mt.so.0
+%%VT%%%%MPIDIR%%/lib/libvt.a
+%%VT%%%%MPIDIR%%/lib/libvt.la
+%%VT%%%%MPIDIR%%/lib/libvt.so
+%%VT%%%%MPIDIR%%/lib/libvt.so.0
+%%VT%%%%MPIDIR%%/%%DATADIR%%/mpiCC-vt-wrapper-data.txt
+%%VT%%%%MPIDIR%%/%%DATADIR%%/mpic++-vt-wrapper-data.txt
+%%VT%%%%MPIDIR%%/%%DATADIR%%/mpicc-vt-wrapper-data.txt
+%%VT%%%%MPIDIR%%/%%DATADIR%%/mpicxx-vt-wrapper-data.txt
+%%VT%%%%MPIDIR%%/%%DATADIR%%/mpif77-vt-wrapper-data.txt
+%%VT%%%%MPIDIR%%/%%DATADIR%%/mpif90-vt-wrapper-data.txt
+%%VT%%%%MPIDIR%%/%%DATADIR%%/mpifort-vt-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/FILTER.SPEC
+%%VT%%%%MPIDIR%%/share/vampirtrace/GROUPS.SPEC
+%%VT%%%%MPIDIR%%/share/vampirtrace/METRICS.SPEC
+%%VT%%%%MPIDIR%%/share/vampirtrace/config.log
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/ChangeLog
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/LICENSE
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/UserManual.html
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/UserManual.pdf
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/ChangeLog
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/LICENSE
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/otfprofile.pdf
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/otfprofile_clustering.pdf
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/otftools.pdf
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/specification.pdf
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/vtsetup/ChangeLog
+%%VT%%%%MPIDIR%%/share/vampirtrace/doc/vtsetup/LICENSE
+%%VT%%%%MPIDIR%%/share/vampirtrace/libtool
+%%VT%%%%MPIDIR%%/share/vampirtrace/omp.h
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtCC-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtc++-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtcc-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtcxx-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtf77-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtf90-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtfort-wrapper-data.txt
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtsetup-data.dtd
+%%VT%%%%MPIDIR%%/share/vampirtrace/vtsetup-data.xml
+%%MPIDIR%%/%%ETCDIR%%-default-hostfile
+%%MPIDIR%%/%%ETCDIR%%-mca-params.conf
+%%MPIDIR%%/%%ETCDIR%%-totalview.tcl
%%MPIDIR%%/include/mpi-ext.h
%%MPIDIR%%/include/mpi.h
%%MPIDIR%%/include/mpi_portable_platform.h
-%%MPIDIR%%/include/mpif-common.h
%%MPIDIR%%/include/mpif-config.h
-%%MPIDIR%%/include/mpif-mpi-io.h
+%%MPIDIR%%/include/mpif-constants.h
+%%MPIDIR%%/include/mpif-ext.h
+%%MPIDIR%%/include/mpif-externals.h
+%%MPIDIR%%/include/mpif-handles.h
+%%MPIDIR%%/include/mpif-io-constants.h
+%%MPIDIR%%/include/mpif-io-handles.h
+%%MPIDIR%%/include/mpif-sentinels.h
%%MPIDIR%%/include/mpif.h
+%%MPIDIR%%/include/mpp/shmem.fh
+%%MPIDIR%%/include/mpp/shmem.h
%%MPIDIR%%/include/openmpi/ompi/mpi/cxx/comm.h
%%MPIDIR%%/include/openmpi/ompi/mpi/cxx/comm_inln.h
%%MPIDIR%%/include/openmpi/ompi/mpi/cxx/constants.h
@@ -67,30 +209,32 @@
%%MPIDIR%%/include/openmpi/ompi/mpi/cxx/topology_inln.h
%%MPIDIR%%/include/openmpi/ompi/mpi/cxx/win.h
%%MPIDIR%%/include/openmpi/ompi/mpi/cxx/win_inln.h
+%%MPIDIR%%/include/shmem.fh
+%%MPIDIR%%/include/shmem.h
%%MPIDIR%%/lib/libmca_common_sm.la
%%MPIDIR%%/lib/libmca_common_sm.so
-%%MPIDIR%%/lib/libmca_common_sm.so.3
+%%MPIDIR%%/lib/libmca_common_sm.so.4
%%MPIDIR%%/lib/libmpi.la
%%MPIDIR%%/lib/libmpi.so
-%%MPIDIR%%/lib/libmpi.so.1
+%%MPIDIR%%/lib/libmpi.so.6
%%MPIDIR%%/lib/libmpi_cxx.la
%%MPIDIR%%/lib/libmpi_cxx.so
-%%MPIDIR%%/lib/libmpi_cxx.so.1
-%%MPIDIR%%/lib/libmpi_f77.la
-%%MPIDIR%%/lib/libmpi_f77.so
-%%MPIDIR%%/lib/libmpi_f77.so.1
-%%MPIDIR%%/lib/libmpi_f90.la
-%%MPIDIR%%/lib/libmpi_f90.so
-%%MPIDIR%%/lib/libmpi_f90.so.4
+%%MPIDIR%%/lib/libmpi_cxx.so.2
+%%MPIDIR%%/lib/libmpi_mpifh.la
+%%MPIDIR%%/lib/libmpi_mpifh.so
+%%MPIDIR%%/lib/libmpi_mpifh.so.5
+%%MPIDIR%%/lib/libmpi_usempi.la
+%%MPIDIR%%/lib/libmpi_usempi.so
+%%MPIDIR%%/lib/libmpi_usempi.so.4
%%MPIDIR%%/lib/libompitrace.la
%%MPIDIR%%/lib/libompitrace.so
%%MPIDIR%%/lib/libompitrace.so.0
%%MPIDIR%%/lib/libopen-pal.la
%%MPIDIR%%/lib/libopen-pal.so
-%%MPIDIR%%/lib/libopen-pal.so.4
+%%MPIDIR%%/lib/libopen-pal.so.7
%%MPIDIR%%/lib/libopen-rte.la
%%MPIDIR%%/lib/libopen-rte.so
-%%MPIDIR%%/lib/libopen-rte.so.4
+%%MPIDIR%%/lib/libopen-rte.so.7
%%MPIDIR%%/lib/mpi.mod
%%MPIDIR%%/lib/openmpi/libompi_dbg_msgq.la
%%MPIDIR%%/lib/openmpi/libompi_dbg_msgq.so
@@ -98,6 +242,10 @@
%%MPIDIR%%/lib/openmpi/mca_allocator_basic.so
%%MPIDIR%%/lib/openmpi/mca_allocator_bucket.la
%%MPIDIR%%/lib/openmpi/mca_allocator_bucket.so
+%%MPIDIR%%/lib/openmpi/mca_bcol_basesmuma.la
+%%MPIDIR%%/lib/openmpi/mca_bcol_basesmuma.so
+%%MPIDIR%%/lib/openmpi/mca_bcol_ptpcoll.la
+%%MPIDIR%%/lib/openmpi/mca_bcol_ptpcoll.so
%%MPIDIR%%/lib/openmpi/mca_bml_r2.la
%%MPIDIR%%/lib/openmpi/mca_bml_r2.so
%%MPIDIR%%/lib/openmpi/mca_btl_self.la
@@ -106,100 +254,126 @@
%%MPIDIR%%/lib/openmpi/mca_btl_sm.so
%%MPIDIR%%/lib/openmpi/mca_btl_tcp.la
%%MPIDIR%%/lib/openmpi/mca_btl_tcp.so
-%%MPIDIR%%/lib/openmpi/mca_carto_auto_detect.la
-%%MPIDIR%%/lib/openmpi/mca_carto_auto_detect.so
-%%MPIDIR%%/lib/openmpi/mca_carto_file.la
-%%MPIDIR%%/lib/openmpi/mca_carto_file.so
+%%MPIDIR%%/lib/openmpi/mca_btl_vader.la
+%%MPIDIR%%/lib/openmpi/mca_btl_vader.so
%%MPIDIR%%/lib/openmpi/mca_coll_basic.la
%%MPIDIR%%/lib/openmpi/mca_coll_basic.so
%%MPIDIR%%/lib/openmpi/mca_coll_hierarch.la
%%MPIDIR%%/lib/openmpi/mca_coll_hierarch.so
%%MPIDIR%%/lib/openmpi/mca_coll_inter.la
%%MPIDIR%%/lib/openmpi/mca_coll_inter.so
+%%MPIDIR%%/lib/openmpi/mca_coll_libnbc.la
+%%MPIDIR%%/lib/openmpi/mca_coll_libnbc.so
+%%MPIDIR%%/lib/openmpi/mca_coll_ml.la
+%%MPIDIR%%/lib/openmpi/mca_coll_ml.so
%%MPIDIR%%/lib/openmpi/mca_coll_self.la
%%MPIDIR%%/lib/openmpi/mca_coll_self.so
%%MPIDIR%%/lib/openmpi/mca_coll_sm.la
%%MPIDIR%%/lib/openmpi/mca_coll_sm.so
-%%MPIDIR%%/lib/openmpi/mca_coll_sync.la
-%%MPIDIR%%/lib/openmpi/mca_coll_sync.so
%%MPIDIR%%/lib/openmpi/mca_coll_tuned.la
%%MPIDIR%%/lib/openmpi/mca_coll_tuned.so
+%%MPIDIR%%/lib/openmpi/mca_compress_bzip.la
+%%MPIDIR%%/lib/openmpi/mca_compress_bzip.so
+%%MPIDIR%%/lib/openmpi/mca_compress_gzip.la
+%%MPIDIR%%/lib/openmpi/mca_compress_gzip.so
%%MPIDIR%%/lib/openmpi/mca_crs_none.la
%%MPIDIR%%/lib/openmpi/mca_crs_none.so
+%%MPIDIR%%/lib/openmpi/mca_db_hash.la
+%%MPIDIR%%/lib/openmpi/mca_db_hash.so
+%%MPIDIR%%/lib/openmpi/mca_db_print.la
+%%MPIDIR%%/lib/openmpi/mca_db_print.so
+%%MPIDIR%%/lib/openmpi/mca_dfs_app.la
+%%MPIDIR%%/lib/openmpi/mca_dfs_app.so
+%%MPIDIR%%/lib/openmpi/mca_dfs_orted.la
+%%MPIDIR%%/lib/openmpi/mca_dfs_orted.so
+%%MPIDIR%%/lib/openmpi/mca_dfs_test.la
+%%MPIDIR%%/lib/openmpi/mca_dfs_test.so
%%MPIDIR%%/lib/openmpi/mca_dpm_orte.la
%%MPIDIR%%/lib/openmpi/mca_dpm_orte.so
-%%MPIDIR%%/lib/openmpi/mca_errmgr_default.la
-%%MPIDIR%%/lib/openmpi/mca_errmgr_default.so
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_app.la
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_app.so
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_hnp.la
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_hnp.so
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_orted.la
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_orted.so
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_tool.la
+%%MPIDIR%%/lib/openmpi/mca_errmgr_default_tool.so
%%MPIDIR%%/lib/openmpi/mca_ess_env.la
%%MPIDIR%%/lib/openmpi/mca_ess_env.so
%%MPIDIR%%/lib/openmpi/mca_ess_hnp.la
%%MPIDIR%%/lib/openmpi/mca_ess_hnp.so
%%MPIDIR%%/lib/openmpi/mca_ess_singleton.la
%%MPIDIR%%/lib/openmpi/mca_ess_singleton.so
-%%MPIDIR%%/lib/openmpi/mca_ess_slave.la
-%%MPIDIR%%/lib/openmpi/mca_ess_slave.so
%%MPIDIR%%/lib/openmpi/mca_ess_tool.la
%%MPIDIR%%/lib/openmpi/mca_ess_tool.so
-%%MPIDIR%%/lib/openmpi/mca_filem_rsh.la
-%%MPIDIR%%/lib/openmpi/mca_filem_rsh.so
+%%MPIDIR%%/lib/openmpi/mca_fbtl_posix.la
+%%MPIDIR%%/lib/openmpi/mca_fbtl_posix.so
+%%MPIDIR%%/lib/openmpi/mca_fcoll_dynamic.la
+%%MPIDIR%%/lib/openmpi/mca_fcoll_dynamic.so
+%%MPIDIR%%/lib/openmpi/mca_fcoll_individual.la
+%%MPIDIR%%/lib/openmpi/mca_fcoll_individual.so
+%%MPIDIR%%/lib/openmpi/mca_fcoll_static.la
+%%MPIDIR%%/lib/openmpi/mca_fcoll_static.so
+%%MPIDIR%%/lib/openmpi/mca_fcoll_two_phase.la
+%%MPIDIR%%/lib/openmpi/mca_fcoll_two_phase.so
+%%MPIDIR%%/lib/openmpi/mca_fcoll_ylib.la
+%%MPIDIR%%/lib/openmpi/mca_fcoll_ylib.so
+%%MPIDIR%%/lib/openmpi/mca_filem_raw.la
+%%MPIDIR%%/lib/openmpi/mca_filem_raw.so
+%%MPIDIR%%/lib/openmpi/mca_fs_ufs.la
+%%MPIDIR%%/lib/openmpi/mca_fs_ufs.so
%%MPIDIR%%/lib/openmpi/mca_grpcomm_bad.la
%%MPIDIR%%/lib/openmpi/mca_grpcomm_bad.so
-%%MPIDIR%%/lib/openmpi/mca_grpcomm_basic.la
-%%MPIDIR%%/lib/openmpi/mca_grpcomm_basic.so
-%%MPIDIR%%/lib/openmpi/mca_grpcomm_hier.la
-%%MPIDIR%%/lib/openmpi/mca_grpcomm_hier.so
+%%MPIDIR%%/lib/openmpi/mca_io_ompio.la
+%%MPIDIR%%/lib/openmpi/mca_io_ompio.so
%%MPIDIR%%/lib/openmpi/mca_io_romio.la
%%MPIDIR%%/lib/openmpi/mca_io_romio.so
%%MPIDIR%%/lib/openmpi/mca_iof_hnp.la
%%MPIDIR%%/lib/openmpi/mca_iof_hnp.so
+%%MPIDIR%%/lib/openmpi/mca_iof_mr_hnp.la
+%%MPIDIR%%/lib/openmpi/mca_iof_mr_hnp.so
+%%MPIDIR%%/lib/openmpi/mca_iof_mr_orted.la
+%%MPIDIR%%/lib/openmpi/mca_iof_mr_orted.so
%%MPIDIR%%/lib/openmpi/mca_iof_orted.la
%%MPIDIR%%/lib/openmpi/mca_iof_orted.so
%%MPIDIR%%/lib/openmpi/mca_iof_tool.la
%%MPIDIR%%/lib/openmpi/mca_iof_tool.so
-%%MPIDIR%%/lib/openmpi/mca_maffinity_first_use.la
-%%MPIDIR%%/lib/openmpi/mca_maffinity_first_use.so
-%%MPIDIR%%/lib/openmpi/mca_maffinity_hwloc.la
-%%MPIDIR%%/lib/openmpi/mca_maffinity_hwloc.so
-%%MPIDIR%%/lib/openmpi/mca_mpool_fake.la
-%%MPIDIR%%/lib/openmpi/mca_mpool_fake.so
-%%MPIDIR%%/lib/openmpi/mca_mpool_rdma.la
-%%MPIDIR%%/lib/openmpi/mca_mpool_rdma.so
+%%MPIDIR%%/lib/openmpi/mca_mpool_grdma.la
+%%MPIDIR%%/lib/openmpi/mca_mpool_grdma.so
%%MPIDIR%%/lib/openmpi/mca_mpool_sm.la
%%MPIDIR%%/lib/openmpi/mca_mpool_sm.so
-%%MPIDIR%%/lib/openmpi/mca_notifier_command.la
-%%MPIDIR%%/lib/openmpi/mca_notifier_command.so
-%%MPIDIR%%/lib/openmpi/mca_notifier_syslog.la
-%%MPIDIR%%/lib/openmpi/mca_notifier_syslog.so
%%MPIDIR%%/lib/openmpi/mca_odls_default.la
%%MPIDIR%%/lib/openmpi/mca_odls_default.so
%%MPIDIR%%/lib/openmpi/mca_oob_tcp.la
%%MPIDIR%%/lib/openmpi/mca_oob_tcp.so
-%%MPIDIR%%/lib/openmpi/mca_osc_pt2pt.la
-%%MPIDIR%%/lib/openmpi/mca_osc_pt2pt.so
%%MPIDIR%%/lib/openmpi/mca_osc_rdma.la
%%MPIDIR%%/lib/openmpi/mca_osc_rdma.so
-%%MPIDIR%%/lib/openmpi/mca_paffinity_hwloc.la
-%%MPIDIR%%/lib/openmpi/mca_paffinity_hwloc.so
+%%MPIDIR%%/lib/openmpi/mca_osc_sm.la
+%%MPIDIR%%/lib/openmpi/mca_osc_sm.so
+%%MPIDIR%%/lib/openmpi/mca_plm_isolated.la
+%%MPIDIR%%/lib/openmpi/mca_plm_isolated.so
%%MPIDIR%%/lib/openmpi/mca_plm_rsh.la
%%MPIDIR%%/lib/openmpi/mca_plm_rsh.so
%%MPIDIR%%/lib/openmpi/mca_pml_bfo.la
%%MPIDIR%%/lib/openmpi/mca_pml_bfo.so
%%MPIDIR%%/lib/openmpi/mca_pml_cm.la
%%MPIDIR%%/lib/openmpi/mca_pml_cm.so
-%%MPIDIR%%/lib/openmpi/mca_pml_csum.la
-%%MPIDIR%%/lib/openmpi/mca_pml_csum.so
%%MPIDIR%%/lib/openmpi/mca_pml_ob1.la
%%MPIDIR%%/lib/openmpi/mca_pml_ob1.so
-%%MPIDIR%%/lib/openmpi/mca_pml_v.la
-%%MPIDIR%%/lib/openmpi/mca_pml_v.so
+%%MPIDIR%%/lib/openmpi/mca_pstat_test.la
+%%MPIDIR%%/lib/openmpi/mca_pstat_test.so
%%MPIDIR%%/lib/openmpi/mca_pubsub_orte.la
%%MPIDIR%%/lib/openmpi/mca_pubsub_orte.so
-%%MPIDIR%%/lib/openmpi/mca_ras_cm.la
-%%MPIDIR%%/lib/openmpi/mca_ras_cm.so
+%%MPIDIR%%/lib/openmpi/mca_ras_simulator.la
+%%MPIDIR%%/lib/openmpi/mca_ras_simulator.so
%%MPIDIR%%/lib/openmpi/mca_rcache_vma.la
%%MPIDIR%%/lib/openmpi/mca_rcache_vma.so
-%%MPIDIR%%/lib/openmpi/mca_rmaps_load_balance.la
-%%MPIDIR%%/lib/openmpi/mca_rmaps_load_balance.so
+%%MPIDIR%%/lib/openmpi/mca_rmaps_lama.la
+%%MPIDIR%%/lib/openmpi/mca_rmaps_lama.so
+%%MPIDIR%%/lib/openmpi/mca_rmaps_mindist.la
+%%MPIDIR%%/lib/openmpi/mca_rmaps_mindist.so
+%%MPIDIR%%/lib/openmpi/mca_rmaps_ppr.la
+%%MPIDIR%%/lib/openmpi/mca_rmaps_ppr.so
%%MPIDIR%%/lib/openmpi/mca_rmaps_rank_file.la
%%MPIDIR%%/lib/openmpi/mca_rmaps_rank_file.so
%%MPIDIR%%/lib/openmpi/mca_rmaps_resilient.la
@@ -208,36 +382,61 @@
%%MPIDIR%%/lib/openmpi/mca_rmaps_round_robin.so
%%MPIDIR%%/lib/openmpi/mca_rmaps_seq.la
%%MPIDIR%%/lib/openmpi/mca_rmaps_seq.so
-%%MPIDIR%%/lib/openmpi/mca_rmaps_topo.la
-%%MPIDIR%%/lib/openmpi/mca_rmaps_topo.so
+%%MPIDIR%%/lib/openmpi/mca_rmaps_staged.la
+%%MPIDIR%%/lib/openmpi/mca_rmaps_staged.so
%%MPIDIR%%/lib/openmpi/mca_rml_oob.la
%%MPIDIR%%/lib/openmpi/mca_rml_oob.so
%%MPIDIR%%/lib/openmpi/mca_routed_binomial.la
%%MPIDIR%%/lib/openmpi/mca_routed_binomial.so
-%%MPIDIR%%/lib/openmpi/mca_routed_cm.la
-%%MPIDIR%%/lib/openmpi/mca_routed_cm.so
+%%MPIDIR%%/lib/openmpi/mca_routed_debruijn.la
+%%MPIDIR%%/lib/openmpi/mca_routed_debruijn.so
%%MPIDIR%%/lib/openmpi/mca_routed_direct.la
%%MPIDIR%%/lib/openmpi/mca_routed_direct.so
-%%MPIDIR%%/lib/openmpi/mca_routed_linear.la
-%%MPIDIR%%/lib/openmpi/mca_routed_linear.so
%%MPIDIR%%/lib/openmpi/mca_routed_radix.la
%%MPIDIR%%/lib/openmpi/mca_routed_radix.so
-%%MPIDIR%%/lib/openmpi/mca_routed_slave.la
-%%MPIDIR%%/lib/openmpi/mca_routed_slave.so
+%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmsocket.la
+%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmsocket.so
+%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmuma.la
+%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmuma.so
+%%MPIDIR%%/lib/openmpi/mca_sbgp_p2p.la
+%%MPIDIR%%/lib/openmpi/mca_sbgp_p2p.so
+%%MPIDIR%%/lib/openmpi/mca_sec_basic.la
+%%MPIDIR%%/lib/openmpi/mca_sec_basic.so
+%%MPIDIR%%/lib/openmpi/mca_sharedfp_individual.la
+%%MPIDIR%%/lib/openmpi/mca_sharedfp_individual.so
+%%MPIDIR%%/lib/openmpi/mca_sharedfp_lockedfile.la
+%%MPIDIR%%/lib/openmpi/mca_sharedfp_lockedfile.so
+%%MPIDIR%%/lib/openmpi/mca_sharedfp_sm.la
+%%MPIDIR%%/lib/openmpi/mca_sharedfp_sm.so
%%MPIDIR%%/lib/openmpi/mca_shmem_mmap.la
%%MPIDIR%%/lib/openmpi/mca_shmem_mmap.so
%%MPIDIR%%/lib/openmpi/mca_shmem_posix.la
%%MPIDIR%%/lib/openmpi/mca_shmem_posix.so
%%MPIDIR%%/lib/openmpi/mca_shmem_sysv.la
%%MPIDIR%%/lib/openmpi/mca_shmem_sysv.so
-%%MPIDIR%%/lib/openmpi/mca_topo_unity.la
-%%MPIDIR%%/lib/openmpi/mca_topo_unity.so
+%%MPIDIR%%/lib/openmpi/mca_state_app.la
+%%MPIDIR%%/lib/openmpi/mca_state_app.so
+%%MPIDIR%%/lib/openmpi/mca_state_hnp.la
+%%MPIDIR%%/lib/openmpi/mca_state_hnp.so
+%%MPIDIR%%/lib/openmpi/mca_state_novm.la
+%%MPIDIR%%/lib/openmpi/mca_state_novm.so
+%%MPIDIR%%/lib/openmpi/mca_state_orted.la
+%%MPIDIR%%/lib/openmpi/mca_state_orted.so
+%%MPIDIR%%/lib/openmpi/mca_state_staged_hnp.la
+%%MPIDIR%%/lib/openmpi/mca_state_staged_hnp.so
+%%MPIDIR%%/lib/openmpi/mca_state_staged_orted.la
+%%MPIDIR%%/lib/openmpi/mca_state_staged_orted.so
+%%MPIDIR%%/lib/openmpi/mca_state_tool.la
+%%MPIDIR%%/lib/openmpi/mca_state_tool.so
+%%MPIDIR%%/lib/openmpi/mca_topo_basic.la
+%%MPIDIR%%/lib/openmpi/mca_topo_basic.so
%%MPIDIR%%/lib/openmpi/mca_vprotocol_pessimist.la
%%MPIDIR%%/lib/openmpi/mca_vprotocol_pessimist.so
%%MPIDIR%%/lib/pkgconfig/ompi-c.pc
%%MPIDIR%%/lib/pkgconfig/ompi-cxx.pc
%%MPIDIR%%/lib/pkgconfig/ompi-f77.pc
%%MPIDIR%%/lib/pkgconfig/ompi-f90.pc
+%%MPIDIR%%/lib/pkgconfig/ompi-fort.pc
%%MPIDIR%%/lib/pkgconfig/ompi.pc
%%MPIDIR%%/lib/pkgconfig/orte.pc
%%MPIDIR%%/man/man1/mpiCC.1.gz
@@ -247,21 +446,19 @@
%%MPIDIR%%/man/man1/mpiexec.1.gz
%%MPIDIR%%/man/man1/mpif77.1.gz
%%MPIDIR%%/man/man1/mpif90.1.gz
+%%MPIDIR%%/man/man1/mpifort.1.gz
%%MPIDIR%%/man/man1/mpirun.1.gz
%%MPIDIR%%/man/man1/ompi-clean.1.gz
-%%MPIDIR%%/man/man1/ompi-iof.1.gz
-%%MPIDIR%%/man/man1/ompi-probe.1.gz
-%%MPIDIR%%/man/man1/ompi-profiler.1.gz
%%MPIDIR%%/man/man1/ompi-ps.1.gz
%%MPIDIR%%/man/man1/ompi-server.1.gz
%%MPIDIR%%/man/man1/ompi-top.1.gz
%%MPIDIR%%/man/man1/ompi_info.1.gz
%%MPIDIR%%/man/man1/opal_wrapper.1.gz
%%MPIDIR%%/man/man1/orte-clean.1.gz
-%%MPIDIR%%/man/man1/orte-iof.1.gz
+%%MPIDIR%%/man/man1/orte-info.1.gz
%%MPIDIR%%/man/man1/orte-ps.1.gz
+%%MPIDIR%%/man/man1/orte-server.1.gz
%%MPIDIR%%/man/man1/orte-top.1.gz
-%%MPIDIR%%/man/man1/orteCC.1.gz
%%MPIDIR%%/man/man1/orted.1.gz
%%MPIDIR%%/man/man1/orterun.1.gz
%%MPIDIR%%/man/man3/MPI.3.gz
@@ -304,31 +501,42 @@
%%MPIDIR%%/man/man3/MPI_Comm_connect.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_create.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_create_errhandler.3.gz
+%%MPIDIR%%/man/man3/MPI_Comm_create_group.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_create_keyval.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_delete_attr.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_disconnect.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_dup.3.gz
+%%MPIDIR%%/man/man3/MPI_Comm_dup_with_info.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_f2c.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_free.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_free_keyval.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_get_attr.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_get_errhandler.3.gz
+%%MPIDIR%%/man/man3/MPI_Comm_get_info.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_get_name.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_get_parent.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_group.3.gz
+%%MPIDIR%%/man/man3/MPI_Comm_idup.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_join.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_rank.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_remote_group.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_remote_size.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_set_attr.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_set_errhandler.3.gz
+%%MPIDIR%%/man/man3/MPI_Comm_set_info.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_set_name.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_size.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_spawn.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_spawn_multiple.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_split.3.gz
+%%MPIDIR%%/man/man3/MPI_Comm_split_type.3.gz
%%MPIDIR%%/man/man3/MPI_Comm_test_inter.3.gz
+%%MPIDIR%%/man/man3/MPI_Compare_and_swap.3.gz
%%MPIDIR%%/man/man3/MPI_Dims_create.3.gz
+%%MPIDIR%%/man/man3/MPI_Dist_graph_create.3.gz
+%%MPIDIR%%/man/man3/MPI_Dist_graph_create_adjacent.3.gz
+%%MPIDIR%%/man/man3/MPI_Dist_graph_neighbors.3.gz
+%%MPIDIR%%/man/man3/MPI_Dist_graph_neighbors_count.3.gz
%%MPIDIR%%/man/man3/MPI_Errhandler_create.3.gz
%%MPIDIR%%/man/man3/MPI_Errhandler_free.3.gz
%%MPIDIR%%/man/man3/MPI_Errhandler_get.3.gz
@@ -336,6 +544,7 @@
%%MPIDIR%%/man/man3/MPI_Error_class.3.gz
%%MPIDIR%%/man/man3/MPI_Error_string.3.gz
%%MPIDIR%%/man/man3/MPI_Exscan.3.gz
+%%MPIDIR%%/man/man3/MPI_Fetch_and_op.3.gz
%%MPIDIR%%/man/man3/MPI_File_c2f.3.gz
%%MPIDIR%%/man/man3/MPI_File_call_errhandler.3.gz
%%MPIDIR%%/man/man3/MPI_File_close.3.gz
@@ -399,9 +608,12 @@
%%MPIDIR%%/man/man3/MPI_Gather.3.gz
%%MPIDIR%%/man/man3/MPI_Gatherv.3.gz
%%MPIDIR%%/man/man3/MPI_Get.3.gz
+%%MPIDIR%%/man/man3/MPI_Get_accumulate.3.gz
%%MPIDIR%%/man/man3/MPI_Get_address.3.gz
%%MPIDIR%%/man/man3/MPI_Get_count.3.gz
%%MPIDIR%%/man/man3/MPI_Get_elements.3.gz
+%%MPIDIR%%/man/man3/MPI_Get_elements_x.3.gz
+%%MPIDIR%%/man/man3/MPI_Get_library_version.3.gz
%%MPIDIR%%/man/man3/MPI_Get_processor_name.3.gz
%%MPIDIR%%/man/man3/MPI_Get_version.3.gz
%%MPIDIR%%/man/man3/MPI_Graph_create.3.gz
@@ -426,11 +638,29 @@
%%MPIDIR%%/man/man3/MPI_Group_size.3.gz
%%MPIDIR%%/man/man3/MPI_Group_translate_ranks.3.gz
%%MPIDIR%%/man/man3/MPI_Group_union.3.gz
+%%MPIDIR%%/man/man3/MPI_Iallgather.3.gz
+%%MPIDIR%%/man/man3/MPI_Iallgatherv.3.gz
+%%MPIDIR%%/man/man3/MPI_Iallreduce.3.gz
+%%MPIDIR%%/man/man3/MPI_Ialltoall.3.gz
+%%MPIDIR%%/man/man3/MPI_Ialltoallv.3.gz
+%%MPIDIR%%/man/man3/MPI_Ialltoallw.3.gz
+%%MPIDIR%%/man/man3/MPI_Ibcast.3.gz
%%MPIDIR%%/man/man3/MPI_Ibsend.3.gz
+%%MPIDIR%%/man/man3/MPI_Iexscan.3.gz
+%%MPIDIR%%/man/man3/MPI_Igather.3.gz
+%%MPIDIR%%/man/man3/MPI_Igatherv.3.gz
+%%MPIDIR%%/man/man3/MPI_Improbe.3.gz
+%%MPIDIR%%/man/man3/MPI_Imrecv.3.gz
+%%MPIDIR%%/man/man3/MPI_Ineighbor_allgather.3.gz
+%%MPIDIR%%/man/man3/MPI_Ineighbor_allgatherv.3.gz
+%%MPIDIR%%/man/man3/MPI_Ineighbor_alltoall.3.gz
+%%MPIDIR%%/man/man3/MPI_Ineighbor_alltoallv.3.gz
+%%MPIDIR%%/man/man3/MPI_Ineighbor_alltoallw.3.gz
%%MPIDIR%%/man/man3/MPI_Info_c2f.3.gz
%%MPIDIR%%/man/man3/MPI_Info_create.3.gz
%%MPIDIR%%/man/man3/MPI_Info_delete.3.gz
%%MPIDIR%%/man/man3/MPI_Info_dup.3.gz
+%%MPIDIR%%/man/man3/MPI_Info_env.3.gz
%%MPIDIR%%/man/man3/MPI_Info_f2c.3.gz
%%MPIDIR%%/man/man3/MPI_Info_free.3.gz
%%MPIDIR%%/man/man3/MPI_Info_get.3.gz
@@ -445,13 +675,26 @@
%%MPIDIR%%/man/man3/MPI_Intercomm_merge.3.gz
%%MPIDIR%%/man/man3/MPI_Iprobe.3.gz
%%MPIDIR%%/man/man3/MPI_Irecv.3.gz
+%%MPIDIR%%/man/man3/MPI_Ireduce.3.gz
+%%MPIDIR%%/man/man3/MPI_Ireduce_scatter.3.gz
+%%MPIDIR%%/man/man3/MPI_Ireduce_scatter_block.3.gz
%%MPIDIR%%/man/man3/MPI_Irsend.3.gz
%%MPIDIR%%/man/man3/MPI_Is_thread_main.3.gz
+%%MPIDIR%%/man/man3/MPI_Iscan.3.gz
+%%MPIDIR%%/man/man3/MPI_Iscatter.3.gz
+%%MPIDIR%%/man/man3/MPI_Iscatterv.3.gz
%%MPIDIR%%/man/man3/MPI_Isend.3.gz
%%MPIDIR%%/man/man3/MPI_Issend.3.gz
%%MPIDIR%%/man/man3/MPI_Keyval_create.3.gz
%%MPIDIR%%/man/man3/MPI_Keyval_free.3.gz
%%MPIDIR%%/man/man3/MPI_Lookup_name.3.gz
+%%MPIDIR%%/man/man3/MPI_Mprobe.3.gz
+%%MPIDIR%%/man/man3/MPI_Mrecv.3.gz
+%%MPIDIR%%/man/man3/MPI_Neighbor_allgather.3.gz
+%%MPIDIR%%/man/man3/MPI_Neighbor_allgatherv.3.gz
+%%MPIDIR%%/man/man3/MPI_Neighbor_alltoall.3.gz
+%%MPIDIR%%/man/man3/MPI_Neighbor_alltoallv.3.gz
+%%MPIDIR%%/man/man3/MPI_Neighbor_alltoallw.3.gz
%%MPIDIR%%/man/man3/MPI_Op_c2f.3.gz
%%MPIDIR%%/man/man3/MPI_Op_create.3.gz
%%MPIDIR%%/man/man3/MPI_Op_f2c.3.gz
@@ -466,16 +709,21 @@
%%MPIDIR%%/man/man3/MPI_Publish_name.3.gz
%%MPIDIR%%/man/man3/MPI_Put.3.gz
%%MPIDIR%%/man/man3/MPI_Query_thread.3.gz
+%%MPIDIR%%/man/man3/MPI_Raccumulate.3.gz
%%MPIDIR%%/man/man3/MPI_Recv.3.gz
%%MPIDIR%%/man/man3/MPI_Recv_init.3.gz
%%MPIDIR%%/man/man3/MPI_Reduce.3.gz
%%MPIDIR%%/man/man3/MPI_Reduce_local.3.gz
%%MPIDIR%%/man/man3/MPI_Reduce_scatter.3.gz
+%%MPIDIR%%/man/man3/MPI_Reduce_scatter_block.3.gz
%%MPIDIR%%/man/man3/MPI_Register_datarep.3.gz
%%MPIDIR%%/man/man3/MPI_Request_c2f.3.gz
%%MPIDIR%%/man/man3/MPI_Request_f2c.3.gz
%%MPIDIR%%/man/man3/MPI_Request_free.3.gz
%%MPIDIR%%/man/man3/MPI_Request_get_status.3.gz
+%%MPIDIR%%/man/man3/MPI_Rget.3.gz
+%%MPIDIR%%/man/man3/MPI_Rget_accumulate.3.gz
+%%MPIDIR%%/man/man3/MPI_Rput.3.gz
%%MPIDIR%%/man/man3/MPI_Rsend.3.gz
%%MPIDIR%%/man/man3/MPI_Rsend_init.3.gz
%%MPIDIR%%/man/man3/MPI_Scan.3.gz
@@ -494,6 +742,7 @@
%%MPIDIR%%/man/man3/MPI_Status_f2c.3.gz
%%MPIDIR%%/man/man3/MPI_Status_set_cancelled.3.gz
%%MPIDIR%%/man/man3/MPI_Status_set_elements.3.gz
+%%MPIDIR%%/man/man3/MPI_Status_set_elements_x.3.gz
%%MPIDIR%%/man/man3/MPI_Test.3.gz
%%MPIDIR%%/man/man3/MPI_Test_cancelled.3.gz
%%MPIDIR%%/man/man3/MPI_Testall.3.gz
@@ -508,6 +757,7 @@
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%%MPIDIR%%/man/man3/MPI_Type_create_f90_real.3.gz
%%MPIDIR%%/man/man3/MPI_Type_create_hindexed.3.gz
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%%MPIDIR%%/man/man3/MPI_Type_create_hvector.3.gz
%%MPIDIR%%/man/man3/MPI_Type_create_indexed_block.3.gz
%%MPIDIR%%/man/man3/MPI_Type_create_keyval.3.gz
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%%MPIDIR%%/man/man3/MPI_Type_get_contents.3.gz
%%MPIDIR%%/man/man3/MPI_Type_get_envelope.3.gz
%%MPIDIR%%/man/man3/MPI_Type_get_extent.3.gz
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%%MPIDIR%%/man/man3/MPI_Type_get_name.3.gz
%%MPIDIR%%/man/man3/MPI_Type_get_true_extent.3.gz
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%%MPIDIR%%/man/man3/MPI_Type_hindexed.3.gz
%%MPIDIR%%/man/man3/MPI_Type_hvector.3.gz
%%MPIDIR%%/man/man3/MPI_Type_indexed.3.gz
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%%MPIDIR%%/man/man3/MPI_Type_set_name.3.gz
%%MPIDIR%%/man/man3/MPI_Type_size.3.gz
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%%MPIDIR%%/man/man3/MPI_Type_struct.3.gz
%%MPIDIR%%/man/man3/MPI_Type_ub.3.gz
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%%MPIDIR%%/man/man3/MPI_Win_f2c.3.gz
%%MPIDIR%%/man/man3/MPI_Win_fence.3.gz
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+%%MPIDIR%%/man/man3/MPI_Win_flush_all.3.gz
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%%MPIDIR%%/man/man3/MPI_Win_free.3.gz
%%MPIDIR%%/man/man3/MPI_Win_free_keyval.3.gz
%%MPIDIR%%/man/man3/MPI_Win_get_attr.3.gz
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%%MPIDIR%%/man/man3/MPI_Win_get_name.3.gz
%%MPIDIR%%/man/man3/MPI_Win_lock.3.gz
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%%MPIDIR%%/man/man3/MPI_Win_post.3.gz
%%MPIDIR%%/man/man3/MPI_Win_set_attr.3.gz
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%%MPIDIR%%/man/man3/MPI_Win_set_name.3.gz
%%MPIDIR%%/man/man3/MPI_Win_start.3.gz
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%%MPIDIR%%/man/man3/MPI_Win_test.3.gz
%%MPIDIR%%/man/man3/MPI_Win_unlock.3.gz
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%%MPIDIR%%/man/man3/MPI_Win_wait.3.gz
%%MPIDIR%%/man/man3/MPI_Wtick.3.gz
%%MPIDIR%%/man/man3/MPI_Wtime.3.gz
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+%%MPIDIR%%/%%DATADIR%%/help-plm-base.txt
+%%MPIDIR%%/%%DATADIR%%/help-plm-rsh.txt
+%%MPIDIR%%/%%DATADIR%%/help-ras-base.txt
+%%MPIDIR%%/%%DATADIR%%/help-ras-simulator.txt
+%%MPIDIR%%/%%DATADIR%%/help-regex.txt
+%%MPIDIR%%/%%DATADIR%%/help-rmaps_rank_file.txt
+%%MPIDIR%%/%%DATADIR%%/help-sec-base.txt
+%%MPIDIR%%/%%DATADIR%%/help-shmem-api.txt
+%%MPIDIR%%/%%DATADIR%%/help-shmem-runtime.txt
+%%MPIDIR%%/%%DATADIR%%/help-state-staged-hnp.txt
+%%MPIDIR%%/%%DATADIR%%/mca-coll-ml.config
+%%MPIDIR%%/%%DATADIR%%/mpiCC-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/mpic++-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/mpicc-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/mpicxx-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/mpif77-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/mpif90-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/mpifort-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/openmpi-valgrind.supp
+%%MPIDIR%%/%%DATADIR%%/ortecc-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/shmemcc-wrapper-data.txt
+%%MPIDIR%%/%%DATADIR%%/shmemfort-wrapper-data.txt
%%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc/vtsetup
%%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc/otf
-%%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc/opari
%%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc
%%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace
%%VT%%@dirrmtry %%MPIDIR%%/include/vampirtrace/open-trace-format
%%VT%%@dirrmtry %%MPIDIR%%/include/vampirtrace
-@dirrmtry %%MPIDIR%%/share/openmpi/amca-param-sets
-@dirrmtry %%MPIDIR%%/share/openmpi
+@dirrmtry %%MPIDIR%%/%%DATADIR%%/amca-param-sets
+@dirrmtry %%MPIDIR%%/%%DATADIR%%
@dirrmtry %%MPIDIR%%/share
@dirrmtry %%MPIDIR%%/man/man7
@dirrmtry %%MPIDIR%%/man/man3
@@ -820,6 +942,7 @@
@dirrmtry %%MPIDIR%%/include/openmpi/ompi/mpi
@dirrmtry %%MPIDIR%%/include/openmpi/ompi
@dirrmtry %%MPIDIR%%/include/openmpi
+@dirrmtry %%MPIDIR%%/include/mpp
@dirrmtry %%MPIDIR%%/include
@dirrmtry %%MPIDIR%%/etc
@dirrmtry %%MPIDIR%%/bin
diff --git a/science/dlpoly-classic/Makefile b/science/dlpoly-classic/Makefile
index 88476f453d10..722ee1734ab5 100644
--- a/science/dlpoly-classic/Makefile
+++ b/science/dlpoly-classic/Makefile
@@ -3,7 +3,7 @@
PORTNAME= dlpoly
PORTVERSION= 1.8
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science java
MASTER_SITES= http://ccpforge.cse.rl.ac.uk/gf/download/frsrelease/238/2028/
PKGNAMESUFFIX= classic
diff --git a/science/fvcom-mpi/Makefile b/science/fvcom-mpi/Makefile
index 1ff483e939a0..035a4839ce7b 100644
--- a/science/fvcom-mpi/Makefile
+++ b/science/fvcom-mpi/Makefile
@@ -1,6 +1,7 @@
# Created by: Jason Bacon <jwbacon@tds.net>
# $FreeBSD$
+PORTREVISION= 2
PKGNAMESUFFIX= -mpi
MAINTAINER= jwbacon@tds.net
diff --git a/science/meep/Makefile b/science/meep/Makefile
index 51054e9eda2b..6f483dcbd417 100644
--- a/science/meep/Makefile
+++ b/science/meep/Makefile
@@ -3,7 +3,7 @@
PORTNAME= meep
PORTVERSION= 1.2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= science
MASTER_SITES= http://ab-initio.mit.edu/meep/
diff --git a/science/pnetcdf/Makefile b/science/pnetcdf/Makefile
index a62162150117..aa1673e27db0 100644
--- a/science/pnetcdf/Makefile
+++ b/science/pnetcdf/Makefile
@@ -3,7 +3,7 @@
PORTNAME= pnetcdf
PORTVERSION= 1.4.1
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= science parallel
MASTER_SITES= http://cucis.ece.northwestern.edu/projects/PnetCDF/Release/ \
LOCAL/sunpoet