diff options
author | danilo <danilo@FreeBSD.org> | 2014-04-13 08:17:45 +0800 |
---|---|---|
committer | danilo <danilo@FreeBSD.org> | 2014-04-13 08:17:45 +0800 |
commit | 9a3ee8babdfba026d27046c680fe4a22d144aea0 (patch) | |
tree | fd19deb2f65455d7e3f2789d17cd9aec2e92aa4e | |
parent | 5e018b3010cc37d2fc6f3548ab1cd3c8f5f76b98 (diff) | |
download | freebsd-ports-gnome-9a3ee8babdfba026d27046c680fe4a22d144aea0.tar.gz freebsd-ports-gnome-9a3ee8babdfba026d27046c680fe4a22d144aea0.tar.zst freebsd-ports-gnome-9a3ee8babdfba026d27046c680fe4a22d144aea0.zip |
- Update openmpi from 1.6.5 to 1.8 (new stable version)
- Convert USE_BZIP2 to USES
-rw-r--r-- | math/parmgridgen/Makefile | 2 | ||||
-rw-r--r-- | net/openmpi/Makefile | 10 | ||||
-rw-r--r-- | net/openmpi/distinfo | 4 | ||||
-rw-r--r-- | net/openmpi/pkg-plist | 735 | ||||
-rw-r--r-- | science/dlpoly-classic/Makefile | 2 | ||||
-rw-r--r-- | science/fvcom-mpi/Makefile | 1 | ||||
-rw-r--r-- | science/meep/Makefile | 2 | ||||
-rw-r--r-- | science/pnetcdf/Makefile | 2 |
8 files changed, 439 insertions, 319 deletions
diff --git a/math/parmgridgen/Makefile b/math/parmgridgen/Makefile index 20b71dfca184..10be4688f878 100644 --- a/math/parmgridgen/Makefile +++ b/math/parmgridgen/Makefile @@ -3,7 +3,7 @@ PORTNAME= parmgridgen PORTVERSION= 1.0 -PORTREVISION= 3 +PORTREVISION= 4 CATEGORIES= math science MASTER_SITES= http://www.mgnet.org/mgnet/Codes/parmgridgen/ \ http://www-users.cs.umn.edu/~moulitsa/download/ \ diff --git a/net/openmpi/Makefile b/net/openmpi/Makefile index bac8abf6ec45..78a3e77d5463 100644 --- a/net/openmpi/Makefile +++ b/net/openmpi/Makefile @@ -4,10 +4,9 @@ # - etc/*.sample support PORTNAME= openmpi -DISTVERSION= 1.6.5 -PORTREVISION= 3 +DISTVERSION= 1.8 CATEGORIES= net parallel -MASTER_SITES= http://www.open-mpi.org/software/ompi/v1.6/downloads/ +MASTER_SITES= http://www.open-mpi.org/software/ompi/v1.8/downloads/ MAINTAINER= danilo@FreeBSD.org COMMENT= High Performance Message Passing Library @@ -18,9 +17,8 @@ LIB_DEPENDS= libexecinfo.so:${PORTSDIR}/devel/libexecinfo \ CONFLICTS= openmpi-devel-1.7.* -USE_BZIP2= yes HAS_CONFIGURE= yes -USES= fortran gmake pkgconfig +USES= fortran gmake pkgconfig tar:bzip2 MPIBASE?= mpi MPIDIR?= ${MPIBASE}/${UNIQUENAME} @@ -64,8 +62,6 @@ SLURM_CONFIGURE_WITH= slurm SLURM_LIB_DEPENDS= libslurm.so:${PORTSDIR}/sysutils/slurm-hpc SLURM_PLIST_FILES= ${MPIDIR}/lib/openmpi/mca_ess_slurm.la \ ${MPIDIR}/lib/openmpi/mca_ess_slurm.so \ - ${MPIDIR}/lib/openmpi/mca_ess_slurmd.la \ - ${MPIDIR}/lib/openmpi/mca_ess_slurmd.so \ ${MPIDIR}/lib/openmpi/mca_plm_slurm.la \ ${MPIDIR}/lib/openmpi/mca_plm_slurm.so \ ${MPIDIR}/lib/openmpi/mca_ras_slurm.la \ diff --git a/net/openmpi/distinfo b/net/openmpi/distinfo index 665fe0d895b7..c58113ba43c9 100644 --- a/net/openmpi/distinfo +++ b/net/openmpi/distinfo @@ -1,2 +1,2 @@ -SHA256 (openmpi-1.6.5.tar.bz2) = fe37bab89b5ef234e0ac82dc798282c2ab08900bf564a1ec27239d3f1ad1fc85 -SIZE (openmpi-1.6.5.tar.bz2) = 10943881 +SHA256 (openmpi-1.8.tar.bz2) = 35d5db86f49c0c64573b2eaf6d51c94ed8a06a9bb23dda475e602288f05e4ecf +SIZE (openmpi-1.8.tar.bz2) = 13291595 diff --git a/net/openmpi/pkg-plist b/net/openmpi/pkg-plist index 84eb9095ccdc..acc5c1df0bec 100644 --- a/net/openmpi/pkg-plist +++ b/net/openmpi/pkg-plist @@ -5,37 +5,179 @@ %%MPIDIR%%/bin/mpiexec %%MPIDIR%%/bin/mpif77 %%MPIDIR%%/bin/mpif90 +%%MPIDIR%%/bin/mpifort %%MPIDIR%%/bin/mpirun %%MPIDIR%%/bin/ompi-clean -%%MPIDIR%%/bin/ompi-iof -%%MPIDIR%%/bin/ompi-probe -%%MPIDIR%%/bin/ompi-profiler %%MPIDIR%%/bin/ompi-ps %%MPIDIR%%/bin/ompi-server %%MPIDIR%%/bin/ompi-top %%MPIDIR%%/bin/ompi_info %%MPIDIR%%/bin/opal_wrapper -%%MPIDIR%%/bin/orte-bootproxy.sh %%MPIDIR%%/bin/orte-clean -%%MPIDIR%%/bin/orte-iof +%%MPIDIR%%/bin/orte-info %%MPIDIR%%/bin/orte-ps +%%MPIDIR%%/bin/orte-server %%MPIDIR%%/bin/orte-top -%%MPIDIR%%/bin/orteCC -%%MPIDIR%%/bin/orte_wrapper_script -%%MPIDIR%%/bin/ortec++ %%MPIDIR%%/bin/ortecc -%%MPIDIR%%/bin/orted %%MPIDIR%%/bin/orterun -%%MPIDIR%%/etc/openmpi-default-hostfile -%%MPIDIR%%/etc/openmpi-mca-params.conf -%%MPIDIR%%/etc/openmpi-totalview.tcl +%%MPIDIR%%/bin/orted +%%VT%%%%MPIDIR%%/bin/mpiCC-vt +%%VT%%%%MPIDIR%%/bin/mpic++-vt +%%VT%%%%MPIDIR%%/bin/mpicc-vt +%%VT%%%%MPIDIR%%/bin/mpicxx-vt +%%VT%%%%MPIDIR%%/bin/mpif77-vt +%%VT%%%%MPIDIR%%/bin/mpif90-vt +%%VT%%%%MPIDIR%%/bin/mpifort-vt +%%VT%%%%MPIDIR%%/bin/otfaux +%%VT%%%%MPIDIR%%/bin/otfcompress +%%VT%%%%MPIDIR%%/bin/otfconfig +%%VT%%%%MPIDIR%%/bin/otfdecompress +%%VT%%%%MPIDIR%%/bin/otfinfo +%%VT%%%%MPIDIR%%/bin/otfmerge +%%VT%%%%MPIDIR%%/bin/otfmerge-mpi +%%VT%%%%MPIDIR%%/bin/otfprint +%%VT%%%%MPIDIR%%/bin/otfprofile +%%VT%%%%MPIDIR%%/bin/otfprofile-mpi +%%VT%%%%MPIDIR%%/bin/otfshrink +%%VT%%%%MPIDIR%%/bin/vtCC +%%VT%%%%MPIDIR%%/bin/vtc++ +%%VT%%%%MPIDIR%%/bin/vtcc +%%VT%%%%MPIDIR%%/bin/vtcxx +%%VT%%%%MPIDIR%%/bin/vtf77 +%%VT%%%%MPIDIR%%/bin/vtf90 +%%VT%%%%MPIDIR%%/bin/vtfilter +%%VT%%%%MPIDIR%%/bin/vtfilter-mpi +%%VT%%%%MPIDIR%%/bin/vtfiltergen +%%VT%%%%MPIDIR%%/bin/vtfiltergen-mpi +%%VT%%%%MPIDIR%%/bin/vtfort +%%VT%%%%MPIDIR%%/bin/vtrun +%%VT%%%%MPIDIR%%/bin/vtsetup +%%VT%%%%MPIDIR%%/bin/vtsetup.jar +%%VT%%%%MPIDIR%%/bin/vtunify +%%VT%%%%MPIDIR%%/bin/vtunify-mpi +%%VT%%%%MPIDIR%%/bin/vtwrapper +%%VT%%%%MPIDIR%%/etc/vtsetup-config.dtd +%%VT%%%%MPIDIR%%/etc/vtsetup-config.xml +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTFAUX_MsgMatching.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTFAUX_State.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTFAUX_Thumbnail.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_CopyHandler.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_CopyHandler_stream.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Definitions.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Errno.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_File.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_FileManager.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_File_iofsl.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Filenames.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_HandlerArray.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_KeyValue.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_MasterControl.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_RBuffer.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_RStream.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Reader.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Version.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_WBuffer.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_WStream.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_Writer.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_inttypes.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/OTF_inttypes_unix.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/otf.h +%%VT%%%%MPIDIR%%/include/vampirtrace/open-trace-format/otfaux.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_inttypes.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user.inc +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_comment.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_comment.inc +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_control.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_control.inc +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_count.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_count.inc +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_marker.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_marker.inc +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_message.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_message.inc +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_region.h +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_user_region.inc +%%VT%%%%MPIDIR%%/include/vampirtrace/vt_wrap_pthread.h +%%VT%%%%MPIDIR%%/lib/libopen-trace-format.a +%%VT%%%%MPIDIR%%/lib/libopen-trace-format.la +%%VT%%%%MPIDIR%%/lib/libopen-trace-format.so +%%VT%%%%MPIDIR%%/lib/libopen-trace-format.so.1 +%%VT%%%%MPIDIR%%/lib/libotfaux.a +%%VT%%%%MPIDIR%%/lib/libotfaux.la +%%VT%%%%MPIDIR%%/lib/libotfaux.so +%%VT%%%%MPIDIR%%/lib/libotfaux.so.0 +%%VT%%%%MPIDIR%%/lib/libvt-hyb.a +%%VT%%%%MPIDIR%%/lib/libvt-hyb.la +%%VT%%%%MPIDIR%%/lib/libvt-hyb.so +%%VT%%%%MPIDIR%%/lib/libvt-hyb.so.0 +%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.a +%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.la +%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.so +%%VT%%%%MPIDIR%%/lib/libvt-mpi-unify.so.0 +%%VT%%%%MPIDIR%%/lib/libvt-mpi.a +%%VT%%%%MPIDIR%%/lib/libvt-mpi.la +%%VT%%%%MPIDIR%%/lib/libvt-mpi.so +%%VT%%%%MPIDIR%%/lib/libvt-mpi.so.0 +%%VT%%%%MPIDIR%%/lib/libvt-mt.a +%%VT%%%%MPIDIR%%/lib/libvt-mt.la +%%VT%%%%MPIDIR%%/lib/libvt-mt.so +%%VT%%%%MPIDIR%%/lib/libvt-mt.so.0 +%%VT%%%%MPIDIR%%/lib/libvt.a +%%VT%%%%MPIDIR%%/lib/libvt.la +%%VT%%%%MPIDIR%%/lib/libvt.so +%%VT%%%%MPIDIR%%/lib/libvt.so.0 +%%VT%%%%MPIDIR%%/%%DATADIR%%/mpiCC-vt-wrapper-data.txt +%%VT%%%%MPIDIR%%/%%DATADIR%%/mpic++-vt-wrapper-data.txt +%%VT%%%%MPIDIR%%/%%DATADIR%%/mpicc-vt-wrapper-data.txt +%%VT%%%%MPIDIR%%/%%DATADIR%%/mpicxx-vt-wrapper-data.txt +%%VT%%%%MPIDIR%%/%%DATADIR%%/mpif77-vt-wrapper-data.txt +%%VT%%%%MPIDIR%%/%%DATADIR%%/mpif90-vt-wrapper-data.txt +%%VT%%%%MPIDIR%%/%%DATADIR%%/mpifort-vt-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/FILTER.SPEC +%%VT%%%%MPIDIR%%/share/vampirtrace/GROUPS.SPEC +%%VT%%%%MPIDIR%%/share/vampirtrace/METRICS.SPEC +%%VT%%%%MPIDIR%%/share/vampirtrace/config.log +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/ChangeLog +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/LICENSE +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/UserManual.html +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/UserManual.pdf +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/ChangeLog +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/LICENSE +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/otfprofile.pdf +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/otfprofile_clustering.pdf +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/otftools.pdf +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/otf/specification.pdf +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/vtsetup/ChangeLog +%%VT%%%%MPIDIR%%/share/vampirtrace/doc/vtsetup/LICENSE +%%VT%%%%MPIDIR%%/share/vampirtrace/libtool +%%VT%%%%MPIDIR%%/share/vampirtrace/omp.h +%%VT%%%%MPIDIR%%/share/vampirtrace/vtCC-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/vtc++-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/vtcc-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/vtcxx-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/vtf77-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/vtf90-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/vtfort-wrapper-data.txt +%%VT%%%%MPIDIR%%/share/vampirtrace/vtsetup-data.dtd +%%VT%%%%MPIDIR%%/share/vampirtrace/vtsetup-data.xml +%%MPIDIR%%/%%ETCDIR%%-default-hostfile +%%MPIDIR%%/%%ETCDIR%%-mca-params.conf +%%MPIDIR%%/%%ETCDIR%%-totalview.tcl %%MPIDIR%%/include/mpi-ext.h %%MPIDIR%%/include/mpi.h %%MPIDIR%%/include/mpi_portable_platform.h -%%MPIDIR%%/include/mpif-common.h %%MPIDIR%%/include/mpif-config.h -%%MPIDIR%%/include/mpif-mpi-io.h +%%MPIDIR%%/include/mpif-constants.h +%%MPIDIR%%/include/mpif-ext.h +%%MPIDIR%%/include/mpif-externals.h +%%MPIDIR%%/include/mpif-handles.h +%%MPIDIR%%/include/mpif-io-constants.h +%%MPIDIR%%/include/mpif-io-handles.h +%%MPIDIR%%/include/mpif-sentinels.h %%MPIDIR%%/include/mpif.h +%%MPIDIR%%/include/mpp/shmem.fh +%%MPIDIR%%/include/mpp/shmem.h %%MPIDIR%%/include/openmpi/ompi/mpi/cxx/comm.h %%MPIDIR%%/include/openmpi/ompi/mpi/cxx/comm_inln.h %%MPIDIR%%/include/openmpi/ompi/mpi/cxx/constants.h @@ -67,30 +209,32 @@ %%MPIDIR%%/include/openmpi/ompi/mpi/cxx/topology_inln.h %%MPIDIR%%/include/openmpi/ompi/mpi/cxx/win.h %%MPIDIR%%/include/openmpi/ompi/mpi/cxx/win_inln.h +%%MPIDIR%%/include/shmem.fh +%%MPIDIR%%/include/shmem.h %%MPIDIR%%/lib/libmca_common_sm.la %%MPIDIR%%/lib/libmca_common_sm.so -%%MPIDIR%%/lib/libmca_common_sm.so.3 +%%MPIDIR%%/lib/libmca_common_sm.so.4 %%MPIDIR%%/lib/libmpi.la %%MPIDIR%%/lib/libmpi.so -%%MPIDIR%%/lib/libmpi.so.1 +%%MPIDIR%%/lib/libmpi.so.6 %%MPIDIR%%/lib/libmpi_cxx.la %%MPIDIR%%/lib/libmpi_cxx.so -%%MPIDIR%%/lib/libmpi_cxx.so.1 -%%MPIDIR%%/lib/libmpi_f77.la -%%MPIDIR%%/lib/libmpi_f77.so -%%MPIDIR%%/lib/libmpi_f77.so.1 -%%MPIDIR%%/lib/libmpi_f90.la -%%MPIDIR%%/lib/libmpi_f90.so -%%MPIDIR%%/lib/libmpi_f90.so.4 +%%MPIDIR%%/lib/libmpi_cxx.so.2 +%%MPIDIR%%/lib/libmpi_mpifh.la +%%MPIDIR%%/lib/libmpi_mpifh.so +%%MPIDIR%%/lib/libmpi_mpifh.so.5 +%%MPIDIR%%/lib/libmpi_usempi.la +%%MPIDIR%%/lib/libmpi_usempi.so +%%MPIDIR%%/lib/libmpi_usempi.so.4 %%MPIDIR%%/lib/libompitrace.la %%MPIDIR%%/lib/libompitrace.so %%MPIDIR%%/lib/libompitrace.so.0 %%MPIDIR%%/lib/libopen-pal.la %%MPIDIR%%/lib/libopen-pal.so -%%MPIDIR%%/lib/libopen-pal.so.4 +%%MPIDIR%%/lib/libopen-pal.so.7 %%MPIDIR%%/lib/libopen-rte.la %%MPIDIR%%/lib/libopen-rte.so -%%MPIDIR%%/lib/libopen-rte.so.4 +%%MPIDIR%%/lib/libopen-rte.so.7 %%MPIDIR%%/lib/mpi.mod %%MPIDIR%%/lib/openmpi/libompi_dbg_msgq.la %%MPIDIR%%/lib/openmpi/libompi_dbg_msgq.so @@ -98,6 +242,10 @@ %%MPIDIR%%/lib/openmpi/mca_allocator_basic.so %%MPIDIR%%/lib/openmpi/mca_allocator_bucket.la %%MPIDIR%%/lib/openmpi/mca_allocator_bucket.so +%%MPIDIR%%/lib/openmpi/mca_bcol_basesmuma.la +%%MPIDIR%%/lib/openmpi/mca_bcol_basesmuma.so +%%MPIDIR%%/lib/openmpi/mca_bcol_ptpcoll.la +%%MPIDIR%%/lib/openmpi/mca_bcol_ptpcoll.so %%MPIDIR%%/lib/openmpi/mca_bml_r2.la %%MPIDIR%%/lib/openmpi/mca_bml_r2.so %%MPIDIR%%/lib/openmpi/mca_btl_self.la @@ -106,100 +254,126 @@ %%MPIDIR%%/lib/openmpi/mca_btl_sm.so %%MPIDIR%%/lib/openmpi/mca_btl_tcp.la %%MPIDIR%%/lib/openmpi/mca_btl_tcp.so -%%MPIDIR%%/lib/openmpi/mca_carto_auto_detect.la -%%MPIDIR%%/lib/openmpi/mca_carto_auto_detect.so -%%MPIDIR%%/lib/openmpi/mca_carto_file.la -%%MPIDIR%%/lib/openmpi/mca_carto_file.so +%%MPIDIR%%/lib/openmpi/mca_btl_vader.la +%%MPIDIR%%/lib/openmpi/mca_btl_vader.so %%MPIDIR%%/lib/openmpi/mca_coll_basic.la %%MPIDIR%%/lib/openmpi/mca_coll_basic.so %%MPIDIR%%/lib/openmpi/mca_coll_hierarch.la %%MPIDIR%%/lib/openmpi/mca_coll_hierarch.so %%MPIDIR%%/lib/openmpi/mca_coll_inter.la %%MPIDIR%%/lib/openmpi/mca_coll_inter.so +%%MPIDIR%%/lib/openmpi/mca_coll_libnbc.la +%%MPIDIR%%/lib/openmpi/mca_coll_libnbc.so +%%MPIDIR%%/lib/openmpi/mca_coll_ml.la +%%MPIDIR%%/lib/openmpi/mca_coll_ml.so %%MPIDIR%%/lib/openmpi/mca_coll_self.la %%MPIDIR%%/lib/openmpi/mca_coll_self.so %%MPIDIR%%/lib/openmpi/mca_coll_sm.la %%MPIDIR%%/lib/openmpi/mca_coll_sm.so -%%MPIDIR%%/lib/openmpi/mca_coll_sync.la -%%MPIDIR%%/lib/openmpi/mca_coll_sync.so %%MPIDIR%%/lib/openmpi/mca_coll_tuned.la %%MPIDIR%%/lib/openmpi/mca_coll_tuned.so +%%MPIDIR%%/lib/openmpi/mca_compress_bzip.la +%%MPIDIR%%/lib/openmpi/mca_compress_bzip.so +%%MPIDIR%%/lib/openmpi/mca_compress_gzip.la +%%MPIDIR%%/lib/openmpi/mca_compress_gzip.so %%MPIDIR%%/lib/openmpi/mca_crs_none.la %%MPIDIR%%/lib/openmpi/mca_crs_none.so +%%MPIDIR%%/lib/openmpi/mca_db_hash.la +%%MPIDIR%%/lib/openmpi/mca_db_hash.so +%%MPIDIR%%/lib/openmpi/mca_db_print.la +%%MPIDIR%%/lib/openmpi/mca_db_print.so +%%MPIDIR%%/lib/openmpi/mca_dfs_app.la +%%MPIDIR%%/lib/openmpi/mca_dfs_app.so +%%MPIDIR%%/lib/openmpi/mca_dfs_orted.la +%%MPIDIR%%/lib/openmpi/mca_dfs_orted.so +%%MPIDIR%%/lib/openmpi/mca_dfs_test.la +%%MPIDIR%%/lib/openmpi/mca_dfs_test.so %%MPIDIR%%/lib/openmpi/mca_dpm_orte.la %%MPIDIR%%/lib/openmpi/mca_dpm_orte.so -%%MPIDIR%%/lib/openmpi/mca_errmgr_default.la -%%MPIDIR%%/lib/openmpi/mca_errmgr_default.so +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_app.la +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_app.so +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_hnp.la +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_hnp.so +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_orted.la +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_orted.so +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_tool.la +%%MPIDIR%%/lib/openmpi/mca_errmgr_default_tool.so %%MPIDIR%%/lib/openmpi/mca_ess_env.la %%MPIDIR%%/lib/openmpi/mca_ess_env.so %%MPIDIR%%/lib/openmpi/mca_ess_hnp.la %%MPIDIR%%/lib/openmpi/mca_ess_hnp.so %%MPIDIR%%/lib/openmpi/mca_ess_singleton.la %%MPIDIR%%/lib/openmpi/mca_ess_singleton.so -%%MPIDIR%%/lib/openmpi/mca_ess_slave.la -%%MPIDIR%%/lib/openmpi/mca_ess_slave.so %%MPIDIR%%/lib/openmpi/mca_ess_tool.la %%MPIDIR%%/lib/openmpi/mca_ess_tool.so -%%MPIDIR%%/lib/openmpi/mca_filem_rsh.la -%%MPIDIR%%/lib/openmpi/mca_filem_rsh.so +%%MPIDIR%%/lib/openmpi/mca_fbtl_posix.la +%%MPIDIR%%/lib/openmpi/mca_fbtl_posix.so +%%MPIDIR%%/lib/openmpi/mca_fcoll_dynamic.la +%%MPIDIR%%/lib/openmpi/mca_fcoll_dynamic.so +%%MPIDIR%%/lib/openmpi/mca_fcoll_individual.la +%%MPIDIR%%/lib/openmpi/mca_fcoll_individual.so +%%MPIDIR%%/lib/openmpi/mca_fcoll_static.la +%%MPIDIR%%/lib/openmpi/mca_fcoll_static.so +%%MPIDIR%%/lib/openmpi/mca_fcoll_two_phase.la +%%MPIDIR%%/lib/openmpi/mca_fcoll_two_phase.so +%%MPIDIR%%/lib/openmpi/mca_fcoll_ylib.la +%%MPIDIR%%/lib/openmpi/mca_fcoll_ylib.so +%%MPIDIR%%/lib/openmpi/mca_filem_raw.la +%%MPIDIR%%/lib/openmpi/mca_filem_raw.so +%%MPIDIR%%/lib/openmpi/mca_fs_ufs.la +%%MPIDIR%%/lib/openmpi/mca_fs_ufs.so %%MPIDIR%%/lib/openmpi/mca_grpcomm_bad.la %%MPIDIR%%/lib/openmpi/mca_grpcomm_bad.so -%%MPIDIR%%/lib/openmpi/mca_grpcomm_basic.la -%%MPIDIR%%/lib/openmpi/mca_grpcomm_basic.so -%%MPIDIR%%/lib/openmpi/mca_grpcomm_hier.la -%%MPIDIR%%/lib/openmpi/mca_grpcomm_hier.so +%%MPIDIR%%/lib/openmpi/mca_io_ompio.la +%%MPIDIR%%/lib/openmpi/mca_io_ompio.so %%MPIDIR%%/lib/openmpi/mca_io_romio.la %%MPIDIR%%/lib/openmpi/mca_io_romio.so %%MPIDIR%%/lib/openmpi/mca_iof_hnp.la %%MPIDIR%%/lib/openmpi/mca_iof_hnp.so +%%MPIDIR%%/lib/openmpi/mca_iof_mr_hnp.la +%%MPIDIR%%/lib/openmpi/mca_iof_mr_hnp.so +%%MPIDIR%%/lib/openmpi/mca_iof_mr_orted.la +%%MPIDIR%%/lib/openmpi/mca_iof_mr_orted.so %%MPIDIR%%/lib/openmpi/mca_iof_orted.la %%MPIDIR%%/lib/openmpi/mca_iof_orted.so %%MPIDIR%%/lib/openmpi/mca_iof_tool.la %%MPIDIR%%/lib/openmpi/mca_iof_tool.so -%%MPIDIR%%/lib/openmpi/mca_maffinity_first_use.la -%%MPIDIR%%/lib/openmpi/mca_maffinity_first_use.so -%%MPIDIR%%/lib/openmpi/mca_maffinity_hwloc.la -%%MPIDIR%%/lib/openmpi/mca_maffinity_hwloc.so -%%MPIDIR%%/lib/openmpi/mca_mpool_fake.la -%%MPIDIR%%/lib/openmpi/mca_mpool_fake.so -%%MPIDIR%%/lib/openmpi/mca_mpool_rdma.la -%%MPIDIR%%/lib/openmpi/mca_mpool_rdma.so +%%MPIDIR%%/lib/openmpi/mca_mpool_grdma.la +%%MPIDIR%%/lib/openmpi/mca_mpool_grdma.so %%MPIDIR%%/lib/openmpi/mca_mpool_sm.la %%MPIDIR%%/lib/openmpi/mca_mpool_sm.so -%%MPIDIR%%/lib/openmpi/mca_notifier_command.la -%%MPIDIR%%/lib/openmpi/mca_notifier_command.so -%%MPIDIR%%/lib/openmpi/mca_notifier_syslog.la -%%MPIDIR%%/lib/openmpi/mca_notifier_syslog.so %%MPIDIR%%/lib/openmpi/mca_odls_default.la %%MPIDIR%%/lib/openmpi/mca_odls_default.so %%MPIDIR%%/lib/openmpi/mca_oob_tcp.la %%MPIDIR%%/lib/openmpi/mca_oob_tcp.so -%%MPIDIR%%/lib/openmpi/mca_osc_pt2pt.la -%%MPIDIR%%/lib/openmpi/mca_osc_pt2pt.so %%MPIDIR%%/lib/openmpi/mca_osc_rdma.la %%MPIDIR%%/lib/openmpi/mca_osc_rdma.so -%%MPIDIR%%/lib/openmpi/mca_paffinity_hwloc.la -%%MPIDIR%%/lib/openmpi/mca_paffinity_hwloc.so +%%MPIDIR%%/lib/openmpi/mca_osc_sm.la +%%MPIDIR%%/lib/openmpi/mca_osc_sm.so +%%MPIDIR%%/lib/openmpi/mca_plm_isolated.la +%%MPIDIR%%/lib/openmpi/mca_plm_isolated.so %%MPIDIR%%/lib/openmpi/mca_plm_rsh.la %%MPIDIR%%/lib/openmpi/mca_plm_rsh.so %%MPIDIR%%/lib/openmpi/mca_pml_bfo.la %%MPIDIR%%/lib/openmpi/mca_pml_bfo.so %%MPIDIR%%/lib/openmpi/mca_pml_cm.la %%MPIDIR%%/lib/openmpi/mca_pml_cm.so -%%MPIDIR%%/lib/openmpi/mca_pml_csum.la -%%MPIDIR%%/lib/openmpi/mca_pml_csum.so %%MPIDIR%%/lib/openmpi/mca_pml_ob1.la %%MPIDIR%%/lib/openmpi/mca_pml_ob1.so -%%MPIDIR%%/lib/openmpi/mca_pml_v.la -%%MPIDIR%%/lib/openmpi/mca_pml_v.so +%%MPIDIR%%/lib/openmpi/mca_pstat_test.la +%%MPIDIR%%/lib/openmpi/mca_pstat_test.so %%MPIDIR%%/lib/openmpi/mca_pubsub_orte.la %%MPIDIR%%/lib/openmpi/mca_pubsub_orte.so -%%MPIDIR%%/lib/openmpi/mca_ras_cm.la -%%MPIDIR%%/lib/openmpi/mca_ras_cm.so +%%MPIDIR%%/lib/openmpi/mca_ras_simulator.la +%%MPIDIR%%/lib/openmpi/mca_ras_simulator.so %%MPIDIR%%/lib/openmpi/mca_rcache_vma.la %%MPIDIR%%/lib/openmpi/mca_rcache_vma.so -%%MPIDIR%%/lib/openmpi/mca_rmaps_load_balance.la -%%MPIDIR%%/lib/openmpi/mca_rmaps_load_balance.so +%%MPIDIR%%/lib/openmpi/mca_rmaps_lama.la +%%MPIDIR%%/lib/openmpi/mca_rmaps_lama.so +%%MPIDIR%%/lib/openmpi/mca_rmaps_mindist.la +%%MPIDIR%%/lib/openmpi/mca_rmaps_mindist.so +%%MPIDIR%%/lib/openmpi/mca_rmaps_ppr.la +%%MPIDIR%%/lib/openmpi/mca_rmaps_ppr.so %%MPIDIR%%/lib/openmpi/mca_rmaps_rank_file.la %%MPIDIR%%/lib/openmpi/mca_rmaps_rank_file.so %%MPIDIR%%/lib/openmpi/mca_rmaps_resilient.la @@ -208,36 +382,61 @@ %%MPIDIR%%/lib/openmpi/mca_rmaps_round_robin.so %%MPIDIR%%/lib/openmpi/mca_rmaps_seq.la %%MPIDIR%%/lib/openmpi/mca_rmaps_seq.so -%%MPIDIR%%/lib/openmpi/mca_rmaps_topo.la -%%MPIDIR%%/lib/openmpi/mca_rmaps_topo.so +%%MPIDIR%%/lib/openmpi/mca_rmaps_staged.la +%%MPIDIR%%/lib/openmpi/mca_rmaps_staged.so %%MPIDIR%%/lib/openmpi/mca_rml_oob.la %%MPIDIR%%/lib/openmpi/mca_rml_oob.so %%MPIDIR%%/lib/openmpi/mca_routed_binomial.la %%MPIDIR%%/lib/openmpi/mca_routed_binomial.so -%%MPIDIR%%/lib/openmpi/mca_routed_cm.la -%%MPIDIR%%/lib/openmpi/mca_routed_cm.so +%%MPIDIR%%/lib/openmpi/mca_routed_debruijn.la +%%MPIDIR%%/lib/openmpi/mca_routed_debruijn.so %%MPIDIR%%/lib/openmpi/mca_routed_direct.la %%MPIDIR%%/lib/openmpi/mca_routed_direct.so -%%MPIDIR%%/lib/openmpi/mca_routed_linear.la -%%MPIDIR%%/lib/openmpi/mca_routed_linear.so %%MPIDIR%%/lib/openmpi/mca_routed_radix.la %%MPIDIR%%/lib/openmpi/mca_routed_radix.so -%%MPIDIR%%/lib/openmpi/mca_routed_slave.la -%%MPIDIR%%/lib/openmpi/mca_routed_slave.so +%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmsocket.la +%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmsocket.so +%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmuma.la +%%MPIDIR%%/lib/openmpi/mca_sbgp_basesmuma.so +%%MPIDIR%%/lib/openmpi/mca_sbgp_p2p.la +%%MPIDIR%%/lib/openmpi/mca_sbgp_p2p.so +%%MPIDIR%%/lib/openmpi/mca_sec_basic.la +%%MPIDIR%%/lib/openmpi/mca_sec_basic.so +%%MPIDIR%%/lib/openmpi/mca_sharedfp_individual.la +%%MPIDIR%%/lib/openmpi/mca_sharedfp_individual.so +%%MPIDIR%%/lib/openmpi/mca_sharedfp_lockedfile.la +%%MPIDIR%%/lib/openmpi/mca_sharedfp_lockedfile.so +%%MPIDIR%%/lib/openmpi/mca_sharedfp_sm.la +%%MPIDIR%%/lib/openmpi/mca_sharedfp_sm.so %%MPIDIR%%/lib/openmpi/mca_shmem_mmap.la %%MPIDIR%%/lib/openmpi/mca_shmem_mmap.so %%MPIDIR%%/lib/openmpi/mca_shmem_posix.la %%MPIDIR%%/lib/openmpi/mca_shmem_posix.so %%MPIDIR%%/lib/openmpi/mca_shmem_sysv.la %%MPIDIR%%/lib/openmpi/mca_shmem_sysv.so -%%MPIDIR%%/lib/openmpi/mca_topo_unity.la -%%MPIDIR%%/lib/openmpi/mca_topo_unity.so +%%MPIDIR%%/lib/openmpi/mca_state_app.la +%%MPIDIR%%/lib/openmpi/mca_state_app.so +%%MPIDIR%%/lib/openmpi/mca_state_hnp.la +%%MPIDIR%%/lib/openmpi/mca_state_hnp.so +%%MPIDIR%%/lib/openmpi/mca_state_novm.la +%%MPIDIR%%/lib/openmpi/mca_state_novm.so +%%MPIDIR%%/lib/openmpi/mca_state_orted.la +%%MPIDIR%%/lib/openmpi/mca_state_orted.so +%%MPIDIR%%/lib/openmpi/mca_state_staged_hnp.la +%%MPIDIR%%/lib/openmpi/mca_state_staged_hnp.so +%%MPIDIR%%/lib/openmpi/mca_state_staged_orted.la +%%MPIDIR%%/lib/openmpi/mca_state_staged_orted.so +%%MPIDIR%%/lib/openmpi/mca_state_tool.la +%%MPIDIR%%/lib/openmpi/mca_state_tool.so +%%MPIDIR%%/lib/openmpi/mca_topo_basic.la +%%MPIDIR%%/lib/openmpi/mca_topo_basic.so %%MPIDIR%%/lib/openmpi/mca_vprotocol_pessimist.la %%MPIDIR%%/lib/openmpi/mca_vprotocol_pessimist.so %%MPIDIR%%/lib/pkgconfig/ompi-c.pc %%MPIDIR%%/lib/pkgconfig/ompi-cxx.pc %%MPIDIR%%/lib/pkgconfig/ompi-f77.pc %%MPIDIR%%/lib/pkgconfig/ompi-f90.pc +%%MPIDIR%%/lib/pkgconfig/ompi-fort.pc %%MPIDIR%%/lib/pkgconfig/ompi.pc %%MPIDIR%%/lib/pkgconfig/orte.pc %%MPIDIR%%/man/man1/mpiCC.1.gz @@ -247,21 +446,19 @@ %%MPIDIR%%/man/man1/mpiexec.1.gz %%MPIDIR%%/man/man1/mpif77.1.gz %%MPIDIR%%/man/man1/mpif90.1.gz +%%MPIDIR%%/man/man1/mpifort.1.gz %%MPIDIR%%/man/man1/mpirun.1.gz %%MPIDIR%%/man/man1/ompi-clean.1.gz -%%MPIDIR%%/man/man1/ompi-iof.1.gz -%%MPIDIR%%/man/man1/ompi-probe.1.gz -%%MPIDIR%%/man/man1/ompi-profiler.1.gz %%MPIDIR%%/man/man1/ompi-ps.1.gz %%MPIDIR%%/man/man1/ompi-server.1.gz %%MPIDIR%%/man/man1/ompi-top.1.gz %%MPIDIR%%/man/man1/ompi_info.1.gz %%MPIDIR%%/man/man1/opal_wrapper.1.gz %%MPIDIR%%/man/man1/orte-clean.1.gz -%%MPIDIR%%/man/man1/orte-iof.1.gz +%%MPIDIR%%/man/man1/orte-info.1.gz %%MPIDIR%%/man/man1/orte-ps.1.gz +%%MPIDIR%%/man/man1/orte-server.1.gz %%MPIDIR%%/man/man1/orte-top.1.gz -%%MPIDIR%%/man/man1/orteCC.1.gz %%MPIDIR%%/man/man1/orted.1.gz %%MPIDIR%%/man/man1/orterun.1.gz %%MPIDIR%%/man/man3/MPI.3.gz @@ -304,31 +501,42 @@ %%MPIDIR%%/man/man3/MPI_Comm_connect.3.gz %%MPIDIR%%/man/man3/MPI_Comm_create.3.gz %%MPIDIR%%/man/man3/MPI_Comm_create_errhandler.3.gz +%%MPIDIR%%/man/man3/MPI_Comm_create_group.3.gz %%MPIDIR%%/man/man3/MPI_Comm_create_keyval.3.gz %%MPIDIR%%/man/man3/MPI_Comm_delete_attr.3.gz %%MPIDIR%%/man/man3/MPI_Comm_disconnect.3.gz %%MPIDIR%%/man/man3/MPI_Comm_dup.3.gz +%%MPIDIR%%/man/man3/MPI_Comm_dup_with_info.3.gz %%MPIDIR%%/man/man3/MPI_Comm_f2c.3.gz %%MPIDIR%%/man/man3/MPI_Comm_free.3.gz %%MPIDIR%%/man/man3/MPI_Comm_free_keyval.3.gz %%MPIDIR%%/man/man3/MPI_Comm_get_attr.3.gz %%MPIDIR%%/man/man3/MPI_Comm_get_errhandler.3.gz +%%MPIDIR%%/man/man3/MPI_Comm_get_info.3.gz %%MPIDIR%%/man/man3/MPI_Comm_get_name.3.gz %%MPIDIR%%/man/man3/MPI_Comm_get_parent.3.gz %%MPIDIR%%/man/man3/MPI_Comm_group.3.gz +%%MPIDIR%%/man/man3/MPI_Comm_idup.3.gz %%MPIDIR%%/man/man3/MPI_Comm_join.3.gz %%MPIDIR%%/man/man3/MPI_Comm_rank.3.gz %%MPIDIR%%/man/man3/MPI_Comm_remote_group.3.gz %%MPIDIR%%/man/man3/MPI_Comm_remote_size.3.gz %%MPIDIR%%/man/man3/MPI_Comm_set_attr.3.gz %%MPIDIR%%/man/man3/MPI_Comm_set_errhandler.3.gz +%%MPIDIR%%/man/man3/MPI_Comm_set_info.3.gz %%MPIDIR%%/man/man3/MPI_Comm_set_name.3.gz %%MPIDIR%%/man/man3/MPI_Comm_size.3.gz %%MPIDIR%%/man/man3/MPI_Comm_spawn.3.gz %%MPIDIR%%/man/man3/MPI_Comm_spawn_multiple.3.gz %%MPIDIR%%/man/man3/MPI_Comm_split.3.gz +%%MPIDIR%%/man/man3/MPI_Comm_split_type.3.gz %%MPIDIR%%/man/man3/MPI_Comm_test_inter.3.gz +%%MPIDIR%%/man/man3/MPI_Compare_and_swap.3.gz %%MPIDIR%%/man/man3/MPI_Dims_create.3.gz +%%MPIDIR%%/man/man3/MPI_Dist_graph_create.3.gz +%%MPIDIR%%/man/man3/MPI_Dist_graph_create_adjacent.3.gz +%%MPIDIR%%/man/man3/MPI_Dist_graph_neighbors.3.gz +%%MPIDIR%%/man/man3/MPI_Dist_graph_neighbors_count.3.gz %%MPIDIR%%/man/man3/MPI_Errhandler_create.3.gz %%MPIDIR%%/man/man3/MPI_Errhandler_free.3.gz %%MPIDIR%%/man/man3/MPI_Errhandler_get.3.gz @@ -336,6 +544,7 @@ %%MPIDIR%%/man/man3/MPI_Error_class.3.gz %%MPIDIR%%/man/man3/MPI_Error_string.3.gz %%MPIDIR%%/man/man3/MPI_Exscan.3.gz +%%MPIDIR%%/man/man3/MPI_Fetch_and_op.3.gz %%MPIDIR%%/man/man3/MPI_File_c2f.3.gz %%MPIDIR%%/man/man3/MPI_File_call_errhandler.3.gz %%MPIDIR%%/man/man3/MPI_File_close.3.gz @@ -399,9 +608,12 @@ %%MPIDIR%%/man/man3/MPI_Gather.3.gz %%MPIDIR%%/man/man3/MPI_Gatherv.3.gz %%MPIDIR%%/man/man3/MPI_Get.3.gz +%%MPIDIR%%/man/man3/MPI_Get_accumulate.3.gz %%MPIDIR%%/man/man3/MPI_Get_address.3.gz %%MPIDIR%%/man/man3/MPI_Get_count.3.gz %%MPIDIR%%/man/man3/MPI_Get_elements.3.gz +%%MPIDIR%%/man/man3/MPI_Get_elements_x.3.gz +%%MPIDIR%%/man/man3/MPI_Get_library_version.3.gz %%MPIDIR%%/man/man3/MPI_Get_processor_name.3.gz %%MPIDIR%%/man/man3/MPI_Get_version.3.gz %%MPIDIR%%/man/man3/MPI_Graph_create.3.gz @@ -426,11 +638,29 @@ %%MPIDIR%%/man/man3/MPI_Group_size.3.gz %%MPIDIR%%/man/man3/MPI_Group_translate_ranks.3.gz %%MPIDIR%%/man/man3/MPI_Group_union.3.gz +%%MPIDIR%%/man/man3/MPI_Iallgather.3.gz +%%MPIDIR%%/man/man3/MPI_Iallgatherv.3.gz +%%MPIDIR%%/man/man3/MPI_Iallreduce.3.gz +%%MPIDIR%%/man/man3/MPI_Ialltoall.3.gz +%%MPIDIR%%/man/man3/MPI_Ialltoallv.3.gz +%%MPIDIR%%/man/man3/MPI_Ialltoallw.3.gz +%%MPIDIR%%/man/man3/MPI_Ibcast.3.gz %%MPIDIR%%/man/man3/MPI_Ibsend.3.gz +%%MPIDIR%%/man/man3/MPI_Iexscan.3.gz +%%MPIDIR%%/man/man3/MPI_Igather.3.gz +%%MPIDIR%%/man/man3/MPI_Igatherv.3.gz +%%MPIDIR%%/man/man3/MPI_Improbe.3.gz +%%MPIDIR%%/man/man3/MPI_Imrecv.3.gz +%%MPIDIR%%/man/man3/MPI_Ineighbor_allgather.3.gz +%%MPIDIR%%/man/man3/MPI_Ineighbor_allgatherv.3.gz +%%MPIDIR%%/man/man3/MPI_Ineighbor_alltoall.3.gz +%%MPIDIR%%/man/man3/MPI_Ineighbor_alltoallv.3.gz +%%MPIDIR%%/man/man3/MPI_Ineighbor_alltoallw.3.gz %%MPIDIR%%/man/man3/MPI_Info_c2f.3.gz %%MPIDIR%%/man/man3/MPI_Info_create.3.gz %%MPIDIR%%/man/man3/MPI_Info_delete.3.gz %%MPIDIR%%/man/man3/MPI_Info_dup.3.gz +%%MPIDIR%%/man/man3/MPI_Info_env.3.gz %%MPIDIR%%/man/man3/MPI_Info_f2c.3.gz %%MPIDIR%%/man/man3/MPI_Info_free.3.gz %%MPIDIR%%/man/man3/MPI_Info_get.3.gz @@ -445,13 +675,26 @@ %%MPIDIR%%/man/man3/MPI_Intercomm_merge.3.gz %%MPIDIR%%/man/man3/MPI_Iprobe.3.gz %%MPIDIR%%/man/man3/MPI_Irecv.3.gz +%%MPIDIR%%/man/man3/MPI_Ireduce.3.gz +%%MPIDIR%%/man/man3/MPI_Ireduce_scatter.3.gz +%%MPIDIR%%/man/man3/MPI_Ireduce_scatter_block.3.gz %%MPIDIR%%/man/man3/MPI_Irsend.3.gz %%MPIDIR%%/man/man3/MPI_Is_thread_main.3.gz +%%MPIDIR%%/man/man3/MPI_Iscan.3.gz +%%MPIDIR%%/man/man3/MPI_Iscatter.3.gz +%%MPIDIR%%/man/man3/MPI_Iscatterv.3.gz %%MPIDIR%%/man/man3/MPI_Isend.3.gz %%MPIDIR%%/man/man3/MPI_Issend.3.gz %%MPIDIR%%/man/man3/MPI_Keyval_create.3.gz %%MPIDIR%%/man/man3/MPI_Keyval_free.3.gz %%MPIDIR%%/man/man3/MPI_Lookup_name.3.gz +%%MPIDIR%%/man/man3/MPI_Mprobe.3.gz +%%MPIDIR%%/man/man3/MPI_Mrecv.3.gz +%%MPIDIR%%/man/man3/MPI_Neighbor_allgather.3.gz +%%MPIDIR%%/man/man3/MPI_Neighbor_allgatherv.3.gz +%%MPIDIR%%/man/man3/MPI_Neighbor_alltoall.3.gz +%%MPIDIR%%/man/man3/MPI_Neighbor_alltoallv.3.gz +%%MPIDIR%%/man/man3/MPI_Neighbor_alltoallw.3.gz %%MPIDIR%%/man/man3/MPI_Op_c2f.3.gz %%MPIDIR%%/man/man3/MPI_Op_create.3.gz %%MPIDIR%%/man/man3/MPI_Op_f2c.3.gz @@ -466,16 +709,21 @@ %%MPIDIR%%/man/man3/MPI_Publish_name.3.gz %%MPIDIR%%/man/man3/MPI_Put.3.gz %%MPIDIR%%/man/man3/MPI_Query_thread.3.gz +%%MPIDIR%%/man/man3/MPI_Raccumulate.3.gz %%MPIDIR%%/man/man3/MPI_Recv.3.gz %%MPIDIR%%/man/man3/MPI_Recv_init.3.gz %%MPIDIR%%/man/man3/MPI_Reduce.3.gz %%MPIDIR%%/man/man3/MPI_Reduce_local.3.gz %%MPIDIR%%/man/man3/MPI_Reduce_scatter.3.gz +%%MPIDIR%%/man/man3/MPI_Reduce_scatter_block.3.gz %%MPIDIR%%/man/man3/MPI_Register_datarep.3.gz %%MPIDIR%%/man/man3/MPI_Request_c2f.3.gz %%MPIDIR%%/man/man3/MPI_Request_f2c.3.gz %%MPIDIR%%/man/man3/MPI_Request_free.3.gz %%MPIDIR%%/man/man3/MPI_Request_get_status.3.gz +%%MPIDIR%%/man/man3/MPI_Rget.3.gz +%%MPIDIR%%/man/man3/MPI_Rget_accumulate.3.gz +%%MPIDIR%%/man/man3/MPI_Rput.3.gz %%MPIDIR%%/man/man3/MPI_Rsend.3.gz %%MPIDIR%%/man/man3/MPI_Rsend_init.3.gz %%MPIDIR%%/man/man3/MPI_Scan.3.gz @@ -494,6 +742,7 @@ %%MPIDIR%%/man/man3/MPI_Status_f2c.3.gz %%MPIDIR%%/man/man3/MPI_Status_set_cancelled.3.gz %%MPIDIR%%/man/man3/MPI_Status_set_elements.3.gz +%%MPIDIR%%/man/man3/MPI_Status_set_elements_x.3.gz %%MPIDIR%%/man/man3/MPI_Test.3.gz %%MPIDIR%%/man/man3/MPI_Test_cancelled.3.gz %%MPIDIR%%/man/man3/MPI_Testall.3.gz @@ -508,6 +757,7 @@ %%MPIDIR%%/man/man3/MPI_Type_create_f90_integer.3.gz %%MPIDIR%%/man/man3/MPI_Type_create_f90_real.3.gz %%MPIDIR%%/man/man3/MPI_Type_create_hindexed.3.gz +%%MPIDIR%%/man/man3/MPI_Type_create_hindexed_block.3.gz %%MPIDIR%%/man/man3/MPI_Type_create_hvector.3.gz %%MPIDIR%%/man/man3/MPI_Type_create_indexed_block.3.gz %%MPIDIR%%/man/man3/MPI_Type_create_keyval.3.gz @@ -524,8 +774,10 @@ %%MPIDIR%%/man/man3/MPI_Type_get_contents.3.gz %%MPIDIR%%/man/man3/MPI_Type_get_envelope.3.gz %%MPIDIR%%/man/man3/MPI_Type_get_extent.3.gz +%%MPIDIR%%/man/man3/MPI_Type_get_extent_x.3.gz %%MPIDIR%%/man/man3/MPI_Type_get_name.3.gz %%MPIDIR%%/man/man3/MPI_Type_get_true_extent.3.gz +%%MPIDIR%%/man/man3/MPI_Type_get_true_extent_x.3.gz %%MPIDIR%%/man/man3/MPI_Type_hindexed.3.gz %%MPIDIR%%/man/man3/MPI_Type_hvector.3.gz %%MPIDIR%%/man/man3/MPI_Type_indexed.3.gz @@ -534,6 +786,7 @@ %%MPIDIR%%/man/man3/MPI_Type_set_attr.3.gz %%MPIDIR%%/man/man3/MPI_Type_set_name.3.gz %%MPIDIR%%/man/man3/MPI_Type_size.3.gz +%%MPIDIR%%/man/man3/MPI_Type_size_x.3.gz %%MPIDIR%%/man/man3/MPI_Type_struct.3.gz %%MPIDIR%%/man/man3/MPI_Type_ub.3.gz %%MPIDIR%%/man/man3/MPI_Type_vector.3.gz @@ -553,6 +806,10 @@ %%MPIDIR%%/man/man3/MPI_Win_delete_attr.3.gz %%MPIDIR%%/man/man3/MPI_Win_f2c.3.gz %%MPIDIR%%/man/man3/MPI_Win_fence.3.gz +%%MPIDIR%%/man/man3/MPI_Win_flush.3.gz +%%MPIDIR%%/man/man3/MPI_Win_flush_all.3.gz +%%MPIDIR%%/man/man3/MPI_Win_flush_local.3.gz +%%MPIDIR%%/man/man3/MPI_Win_flush_local_all.3.gz %%MPIDIR%%/man/man3/MPI_Win_free.3.gz %%MPIDIR%%/man/man3/MPI_Win_free_keyval.3.gz %%MPIDIR%%/man/man3/MPI_Win_get_attr.3.gz @@ -560,13 +817,16 @@ %%MPIDIR%%/man/man3/MPI_Win_get_group.3.gz %%MPIDIR%%/man/man3/MPI_Win_get_name.3.gz %%MPIDIR%%/man/man3/MPI_Win_lock.3.gz +%%MPIDIR%%/man/man3/MPI_Win_lock_all.3.gz %%MPIDIR%%/man/man3/MPI_Win_post.3.gz %%MPIDIR%%/man/man3/MPI_Win_set_attr.3.gz %%MPIDIR%%/man/man3/MPI_Win_set_errhandler.3.gz %%MPIDIR%%/man/man3/MPI_Win_set_name.3.gz %%MPIDIR%%/man/man3/MPI_Win_start.3.gz +%%MPIDIR%%/man/man3/MPI_Win_sync.3.gz %%MPIDIR%%/man/man3/MPI_Win_test.3.gz %%MPIDIR%%/man/man3/MPI_Win_unlock.3.gz +%%MPIDIR%%/man/man3/MPI_Win_unlock_all.3.gz %%MPIDIR%%/man/man3/MPI_Win_wait.3.gz %%MPIDIR%%/man/man3/MPI_Wtick.3.gz %%MPIDIR%%/man/man3/MPI_Wtime.3.gz @@ -576,238 +836,100 @@ %%MPIDIR%%/man/man7/orte_filem.7.gz %%MPIDIR%%/man/man7/orte_hosts.7.gz %%MPIDIR%%/man/man7/orte_snapc.7.gz -%%MPIDIR%%/share/openmpi/amca-param-sets/example.conf -%%MPIDIR%%/share/openmpi/help-coll-sync.txt 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+%%MPIDIR%%/%%DATADIR%%/help-mpi-runtime.txt +%%MPIDIR%%/%%DATADIR%%/help-mpool-base.txt +%%MPIDIR%%/%%DATADIR%%/help-ompi-crcp-base.txt +%%MPIDIR%%/%%DATADIR%%/help-ompi-dpm-base.txt +%%MPIDIR%%/%%DATADIR%%/help-ompi-dpm-orte.txt +%%MPIDIR%%/%%DATADIR%%/help-ompi-pubsub-orte.txt +%%MPIDIR%%/%%DATADIR%%/help-oob-base.txt +%%MPIDIR%%/%%DATADIR%%/help-oob-tcp.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-compress-base.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-compress-bzip.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-compress-gzip.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-crs-base.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-crs-none.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-hwloc-base.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-runtime.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-shmem-mmap.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-shmem-posix.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-shmem-sysv.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-util.txt +%%MPIDIR%%/%%DATADIR%%/help-opal-wrapper.txt +%%MPIDIR%%/%%DATADIR%%/help-opal_info.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-clean.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-filem-base.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-filem-raw.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-info.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-odls-base.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-odls-default.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-ps.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-rmaps-base.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-rmaps-lama.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-rmaps-md.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-rmaps-ppr.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-rmaps-resilient.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-rmaps-rr.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-rmaps-seq.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-runtime.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-server.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-snapc-base.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-sstore-base.txt +%%MPIDIR%%/%%DATADIR%%/help-orte-top.txt +%%MPIDIR%%/%%DATADIR%%/help-orted.txt +%%MPIDIR%%/%%DATADIR%%/help-orterun.txt +%%MPIDIR%%/%%DATADIR%%/help-plm-base.txt +%%MPIDIR%%/%%DATADIR%%/help-plm-rsh.txt +%%MPIDIR%%/%%DATADIR%%/help-ras-base.txt +%%MPIDIR%%/%%DATADIR%%/help-ras-simulator.txt +%%MPIDIR%%/%%DATADIR%%/help-regex.txt +%%MPIDIR%%/%%DATADIR%%/help-rmaps_rank_file.txt +%%MPIDIR%%/%%DATADIR%%/help-sec-base.txt +%%MPIDIR%%/%%DATADIR%%/help-shmem-api.txt +%%MPIDIR%%/%%DATADIR%%/help-shmem-runtime.txt +%%MPIDIR%%/%%DATADIR%%/help-state-staged-hnp.txt +%%MPIDIR%%/%%DATADIR%%/mca-coll-ml.config +%%MPIDIR%%/%%DATADIR%%/mpiCC-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/mpic++-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/mpicc-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/mpicxx-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/mpif77-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/mpif90-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/mpifort-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/openmpi-valgrind.supp +%%MPIDIR%%/%%DATADIR%%/ortecc-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/shmemcc-wrapper-data.txt +%%MPIDIR%%/%%DATADIR%%/shmemfort-wrapper-data.txt %%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc/vtsetup %%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc/otf -%%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc/opari %%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace/doc %%VT%%@dirrmtry %%MPIDIR%%/share/vampirtrace %%VT%%@dirrmtry %%MPIDIR%%/include/vampirtrace/open-trace-format %%VT%%@dirrmtry %%MPIDIR%%/include/vampirtrace -@dirrmtry %%MPIDIR%%/share/openmpi/amca-param-sets -@dirrmtry %%MPIDIR%%/share/openmpi +@dirrmtry %%MPIDIR%%/%%DATADIR%%/amca-param-sets +@dirrmtry %%MPIDIR%%/%%DATADIR%% @dirrmtry %%MPIDIR%%/share @dirrmtry %%MPIDIR%%/man/man7 @dirrmtry %%MPIDIR%%/man/man3 @@ -820,6 +942,7 @@ @dirrmtry %%MPIDIR%%/include/openmpi/ompi/mpi @dirrmtry %%MPIDIR%%/include/openmpi/ompi @dirrmtry %%MPIDIR%%/include/openmpi +@dirrmtry %%MPIDIR%%/include/mpp @dirrmtry %%MPIDIR%%/include @dirrmtry %%MPIDIR%%/etc @dirrmtry %%MPIDIR%%/bin diff --git a/science/dlpoly-classic/Makefile b/science/dlpoly-classic/Makefile index 88476f453d10..722ee1734ab5 100644 --- a/science/dlpoly-classic/Makefile +++ b/science/dlpoly-classic/Makefile @@ -3,7 +3,7 @@ PORTNAME= dlpoly PORTVERSION= 1.8 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= science java MASTER_SITES= http://ccpforge.cse.rl.ac.uk/gf/download/frsrelease/238/2028/ PKGNAMESUFFIX= classic diff --git a/science/fvcom-mpi/Makefile b/science/fvcom-mpi/Makefile index 1ff483e939a0..035a4839ce7b 100644 --- a/science/fvcom-mpi/Makefile +++ b/science/fvcom-mpi/Makefile @@ -1,6 +1,7 @@ # Created by: Jason Bacon <jwbacon@tds.net> # $FreeBSD$ +PORTREVISION= 2 PKGNAMESUFFIX= -mpi MAINTAINER= jwbacon@tds.net diff --git a/science/meep/Makefile b/science/meep/Makefile index 51054e9eda2b..6f483dcbd417 100644 --- a/science/meep/Makefile +++ b/science/meep/Makefile @@ -3,7 +3,7 @@ PORTNAME= meep PORTVERSION= 1.2 -PORTREVISION= 2 +PORTREVISION= 3 CATEGORIES= science MASTER_SITES= http://ab-initio.mit.edu/meep/ diff --git a/science/pnetcdf/Makefile b/science/pnetcdf/Makefile index a62162150117..aa1673e27db0 100644 --- a/science/pnetcdf/Makefile +++ b/science/pnetcdf/Makefile @@ -3,7 +3,7 @@ PORTNAME= pnetcdf PORTVERSION= 1.4.1 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= science parallel MASTER_SITES= http://cucis.ece.northwestern.edu/projects/PnetCDF/Release/ \ LOCAL/sunpoet |