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authornbm <nbm@FreeBSD.org>2000-08-13 00:15:48 +0800
committernbm <nbm@FreeBSD.org>2000-08-13 00:15:48 +0800
commit854656a18e5b8c10b040fd278aabe87b2367e9de (patch)
tree5b015dbda855ee879a90e4f0cd1ee158a6ad7178 /biology/emboss/files
parent7bb720ac3f315679bba10dcf4b67641f2c18a6a1 (diff)
downloadfreebsd-ports-gnome-854656a18e5b8c10b040fd278aabe87b2367e9de.tar.gz
freebsd-ports-gnome-854656a18e5b8c10b040fd278aabe87b2367e9de.tar.zst
freebsd-ports-gnome-854656a18e5b8c10b040fd278aabe87b2367e9de.zip
Update to emboss 1.1.0, fixing some style bugs too.
PR: ports/20519 Submitted by: Johann Visagie <johann@egenetics.com> (maintainer)
Diffstat (limited to 'biology/emboss/files')
-rw-r--r--biology/emboss/files/patch-aa24
1 files changed, 24 insertions, 0 deletions
diff --git a/biology/emboss/files/patch-aa b/biology/emboss/files/patch-aa
new file mode 100644
index 000000000000..4289821e32b0
--- /dev/null
+++ b/biology/emboss/files/patch-aa
@@ -0,0 +1,24 @@
+Add ${PREFIX}/etc as an acceptable location for emboss.default. (This should
+be incorporated into the next version of EMBOSS.)
+
+The port installs ${PREFIX}/etc/emboss.default.sample
+
+-- Johann <johann@egenetics.com>
+
+
+--- ajax/ajnam.c.orig Wed Aug 2 10:18:59 2000
++++ ajax/ajnam.c Thu Aug 10 10:06:20 2000
+@@ -982,6 +982,13 @@
+ prefixRootFile = fopen (ajStrStr(namRootStr), "r");
+ }
+
++ /* look for $(PREFIX)_ROOT/../emboss.default */
++
++ if (!prefixRootFile) {
++ ajFmtPrintS (&namRootStr, "%s/etc/%s.default", prefixRoot, prefix);
++ prefixRootFile = fopen (ajStrStr(namRootStr), "r");
++ }
++
+ if (namFileOrig)
+ (void) ajStrAppC (&namFileOrig, ", ");
+ (void) ajStrApp (&namFileOrig, namRootStr);