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| author | tdb <tdb@FreeBSD.org> | 2005-12-10 22:04:33 +0800 |
|---|---|---|
| committer | tdb <tdb@FreeBSD.org> | 2005-12-10 22:04:33 +0800 |
| commit | 6414324d7293f89dd98835090d7691ecbdcfd1c5 (patch) | |
| tree | 1ea710ef8b30251665c6654075775025d780b56b /biology/seaview/files | |
| parent | 68d44a1e0854f0b3cdaa9e8bd44a44940c013bbe (diff) | |
| download | freebsd-ports-gnome-6414324d7293f89dd98835090d7691ecbdcfd1c5.tar.gz freebsd-ports-gnome-6414324d7293f89dd98835090d7691ecbdcfd1c5.tar.zst freebsd-ports-gnome-6414324d7293f89dd98835090d7691ecbdcfd1c5.zip | |
- New upstream version; two patches incorporated.
PR: 90140
Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
Approved by: clement (mentor)
Diffstat (limited to 'biology/seaview/files')
| -rw-r--r-- | biology/seaview/files/patch-Makefile | 4 | ||||
| -rw-r--r-- | biology/seaview/files/patch-align.cxx | 19 | ||||
| -rw-r--r-- | biology/seaview/files/patch-seaview.cxx | 11 |
3 files changed, 2 insertions, 32 deletions
diff --git a/biology/seaview/files/patch-Makefile b/biology/seaview/files/patch-Makefile index 192839897672..bd9c939916c2 100644 --- a/biology/seaview/files/patch-Makefile +++ b/biology/seaview/files/patch-Makefile @@ -1,5 +1,5 @@ --- Makefile.orig Wed Apr 6 05:54:30 2005 -+++ Makefile Mon Dec 5 08:31:05 2005 ++++ Makefile Fri Dec 9 07:41:26 2005 @@ -1,18 +1,15 @@ -FLTK = ../fltk -PDF = ../PDFlib-Lite-6.0.1/libs/pdflib @@ -7,7 +7,7 @@ CXX = g++ -CFLAGS = -Dunix -U__APPLE__ -c $(OPT) -I$(FLTK) -I$(PDF) -I$(X11)/include -+CFLAGS = -Dunix -c $(OPT) -I$(X11BASE)/include -I$(LOCALBASE)/include ++CFLAGS+= -Dunix -c $(OPT) -I$(X11BASE)/include -I$(LOCALBASE)/include OBJECTS = seaview.o pdf.o custom.o use_mase_files.o regions.o load_seq.o align.o xfmatpt.o comlines.o chooser_plus.o resource.o nexus.o old_file_chooser.o diff --git a/biology/seaview/files/patch-align.cxx b/biology/seaview/files/patch-align.cxx deleted file mode 100644 index 0db64c232eda..000000000000 --- a/biology/seaview/files/patch-align.cxx +++ /dev/null @@ -1,19 +0,0 @@ ---- align.cxx.orig Mon Nov 17 14:15:01 2003 -+++ align.cxx Mon Nov 17 14:15:26 2003 -@@ -1,6 +1,7 @@ - #include "seaview.h" - #include <stdlib.h> - #include <ctype.h> -+#include <unistd.h> - #ifndef WIN32 - #include <FL/x.H> - #endif -@@ -155,7 +156,7 @@ - #endif - debut = view->active_region->list->debut; - fin = view->active_region->list->fin; --tmpnam(base_fname); -+mkstemp(base_fname); - /* - convertir en minuscules car clustalw n'accepte pas les majuscules ds filenames - */ diff --git a/biology/seaview/files/patch-seaview.cxx b/biology/seaview/files/patch-seaview.cxx deleted file mode 100644 index e437fa511b20..000000000000 --- a/biology/seaview/files/patch-seaview.cxx +++ /dev/null @@ -1,11 +0,0 @@ ---- seaview.cxx.orig Mon Nov 17 14:16:39 2003 -+++ seaview.cxx Mon Nov 17 14:17:13 2003 -@@ -164,6 +164,8 @@ - "seaview.hlp", - #elif defined(__APPLE__) - NULL, -+#elif defined(DEFAULT_HELPFILE) -+ __XSTRING(DEFAULT_HELPFILE), - #else - "seaview.help", - #endif |