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authorijliao <ijliao@FreeBSD.org>2002-01-19 23:15:16 +0800
committerijliao <ijliao@FreeBSD.org>2002-01-19 23:15:16 +0800
commit91ad0c8fc9fafe39dfde31bd2d9846220645bf90 (patch)
tree9c968d39f677fd3f14dc33d9f0e40226c9e6eec8 /biology/tinker
parent34fdeb504c8e9f32b6053f034710fc522f3a0477 (diff)
downloadfreebsd-ports-gnome-91ad0c8fc9fafe39dfde31bd2d9846220645bf90.tar.gz
freebsd-ports-gnome-91ad0c8fc9fafe39dfde31bd2d9846220645bf90.tar.zst
freebsd-ports-gnome-91ad0c8fc9fafe39dfde31bd2d9846220645bf90.zip
Upgrade tinker to the latest revision
PR: 33425 Submitted by: maintainer
Diffstat (limited to 'biology/tinker')
-rw-r--r--biology/tinker/Makefile7
-rw-r--r--biology/tinker/distinfo2
-rw-r--r--biology/tinker/files/patch-aa20
-rw-r--r--biology/tinker/pkg-plist66
-rw-r--r--biology/tinker/pkg-plist.viewer70
5 files changed, 101 insertions, 64 deletions
diff --git a/biology/tinker/Makefile b/biology/tinker/Makefile
index 815e3342fda5..1c2a97a6a110 100644
--- a/biology/tinker/Makefile
+++ b/biology/tinker/Makefile
@@ -7,6 +7,7 @@
PORTNAME= tinker
PORTVERSION= 3.9
+PORTREVISION= 1
CATEGORIES= biology
MASTER_SITES= ftp://dasher.wustl.edu/pub/
DISTNAME= ${PORTNAME}
@@ -28,7 +29,7 @@ pre-fetch:
@${ECHO_MSG} If you get a CHECKSUM mismatch, try doing a \'make distclean\' first.
@${ECHO_MSG} ""
-.if defined(WANT_VIEWER)
+.if defined(WITH_VIEWER)
.if ${XFREE86_VERSION} == 3
BUILD_DEPENDS+= imake:${PORTSDIR}/devel/imake
.elif ${XFREE86_VERSION} == 4
@@ -42,7 +43,7 @@ post-build:
pre-extract:
@${ECHO} ""
@${ECHO} If you would like to also build
- @${ECHO} the molecular viewer, define WANT_VIEWER.
+ @${ECHO} the molecular viewer, define WITH_VIEWER.
@${ECHO} ""
.endif
@@ -114,7 +115,7 @@ ${PREFIX}/share/tinker/bench
@${INSTALL_DATA} ${WRKDIR}/tinker/test/* ${PREFIX}/share/tinker/test
.endif
-.if defined(WANT_VIEWER)
+.if defined(WITH_VIEWER)
@${MKDIR} ${PREFIX}/share/tinker/rasmol
@${INSTALL_PROGRAM} ${WRKDIR}/tinker/rasmol/tview-* ${PREFIX}/bin
@${INSTALL_SCRIPT} ${FILESDIR}/tview ${PREFIX}/bin
diff --git a/biology/tinker/distinfo b/biology/tinker/distinfo
index 3d11520fdd4f..e0a0bfe8ec0a 100644
--- a/biology/tinker/distinfo
+++ b/biology/tinker/distinfo
@@ -1 +1 @@
-MD5 (tinker.tar.gz) = a48fc15fe668f8e41d0cc3316a582928
+MD5 (tinker.tar.gz) = e6f34c61cc40f107fbbcf4b0c7dae5a5
diff --git a/biology/tinker/files/patch-aa b/biology/tinker/files/patch-aa
index e9cf0c948aaf..0fc53910ba6b 100644
--- a/biology/tinker/files/patch-aa
+++ b/biology/tinker/files/patch-aa
@@ -1,5 +1,5 @@
---- ../make/Makefile.orig Sat Jul 21 10:04:48 2001
-+++ ../make/Makefile Wed Sep 5 13:51:19 2001
+--- ../make/Makefile.orig Tue Nov 13 10:16:27 2001
++++ ../make/Makefile Mon Dec 31 15:33:40 2001
@@ -9,8 +9,8 @@
##
## 1. make all Build all the TINKER executables
@@ -68,7 +68,7 @@
#################################################################
## Should not be Necessary to Change Things Below this Point ##
#################################################################
-@@ -494,11 +512,13 @@
+@@ -497,11 +515,13 @@
xyzpdb.x \
xyzsybyl.x
@@ -84,7 +84,7 @@
all: ${EXEFILES}
-@@ -509,57 +529,57 @@
+@@ -512,58 +532,58 @@
cat *.i *.f > tinker.txt
rename:
@@ -104,6 +104,7 @@
- mv minimize.x $(BINDIR)/minimize
- mv minirot.x $(BINDIR)/minirot
- mv minrigid.x $(BINDIR)/minrigid
+- mv monte.x $(BINDIR)/monte
- mv newton.x $(BINDIR)/newton
- mv newtrot.x $(BINDIR)/newtrot
- mv nucleic.x $(BINDIR)/nucleic
@@ -155,6 +156,7 @@
+ ${INSTALL_PROGRAM} minimize.x $(BINDIR)/minimize
+ ${INSTALL_PROGRAM} minirot.x $(BINDIR)/minirot
+ ${INSTALL_PROGRAM} minrigid.x $(BINDIR)/minrigid
++ ${INSTALL_PROGRAM} monte.x $(BINDIR)/monte
+ ${INSTALL_PROGRAM} newton.x $(BINDIR)/newton
+ ${INSTALL_PROGRAM} newtrot.x $(BINDIR)/newtrot
+ ${INSTALL_PROGRAM} nucleic.x $(BINDIR)/nucleic
@@ -193,13 +195,3 @@
remove_links:
rm -f $(LINKDIR)/alchemy
-@@ -682,8 +702,8 @@
- bspline.o \
- calendar.o \
- center.o \
-- chkxyz.o \
- cholesky.o \
-+ chkxyz.o \
- clock.o \
- cluster.o \
- column.o \
diff --git a/biology/tinker/pkg-plist b/biology/tinker/pkg-plist
index fab9edbff2ef..d84db098a538 100644
--- a/biology/tinker/pkg-plist
+++ b/biology/tinker/pkg-plist
@@ -14,6 +14,7 @@ bin/intxyz
bin/minimize
bin/minirot
bin/minrigid
+bin/monte
bin/newton
bin/newtrot
bin/nucleic
@@ -139,19 +140,18 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/bench/results-3.7
%%PORTDOCS%%share/tinker/bench/results-3.8
%%PORTDOCS%%share/tinker/bench/results-3.9
-%%PORTDOCS%%share/tinker/params/README
-%%PORTDOCS%%share/tinker/params/amber.prm
-%%PORTDOCS%%share/tinker/params/charmm.prm
-%%PORTDOCS%%share/tinker/params/dudek.prm
-%%PORTDOCS%%share/tinker/params/hoch.prm
-%%PORTDOCS%%share/tinker/params/mm2.prm
-%%PORTDOCS%%share/tinker/params/mm3.prm
-%%PORTDOCS%%share/tinker/params/mm3pro.prm
-%%PORTDOCS%%share/tinker/params/opls.prm
-%%PORTDOCS%%share/tinker/params/oplsaa.prm
-%%PORTDOCS%%share/tinker/params/smooth.prm
-%%PORTDOCS%%share/tinker/params/smoothaa.prm
-%%PORTDOCS%%share/tinker/params/water.prm
+share/tinker/params/README
+share/tinker/params/amber.prm
+share/tinker/params/charmm.prm
+share/tinker/params/hoch.prm
+share/tinker/params/mm2.prm
+share/tinker/params/mm3.prm
+share/tinker/params/mm3pro.prm
+share/tinker/params/opls.prm
+share/tinker/params/oplsaa.prm
+share/tinker/params/smooth.prm
+share/tinker/params/smoothaa.prm
+share/tinker/params/water.prm
%%PORTDOCS%%share/tinker/test/README
%%PORTDOCS%%share/tinker/test/ala20.key
%%PORTDOCS%%share/tinker/test/ala20.xyz
@@ -182,6 +182,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/bowl2.xyz
%%PORTDOCS%%share/tinker/test/bowl3.key
%%PORTDOCS%%share/tinker/test/bowl3.xyz
+%%PORTDOCS%%share/tinker/test/bucky.int
+%%PORTDOCS%%share/tinker/test/bucky.key
+%%PORTDOCS%%share/tinker/test/bucky.xyz
%%PORTDOCS%%share/tinker/test/butane.int
%%PORTDOCS%%share/tinker/test/butane.key
%%PORTDOCS%%share/tinker/test/butane.xyz
@@ -202,12 +205,12 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/c5.key
%%PORTDOCS%%share/tinker/test/c5.seq
%%PORTDOCS%%share/tinker/test/c5.xyz
-%%PORTDOCS%%share/tinker/test/c7ax.key
-%%PORTDOCS%%share/tinker/test/c7ax.seq
-%%PORTDOCS%%share/tinker/test/c7ax.xyz
-%%PORTDOCS%%share/tinker/test/c7eq.key
-%%PORTDOCS%%share/tinker/test/c7eq.seq
-%%PORTDOCS%%share/tinker/test/c7eq.xyz
+%%PORTDOCS%%share/tinker/test/c7a.key
+%%PORTDOCS%%share/tinker/test/c7a.seq
+%%PORTDOCS%%share/tinker/test/c7a.xyz
+%%PORTDOCS%%share/tinker/test/c7e.key
+%%PORTDOCS%%share/tinker/test/c7e.seq
+%%PORTDOCS%%share/tinker/test/c7e.xyz
%%PORTDOCS%%share/tinker/test/calmodulin.key
%%PORTDOCS%%share/tinker/test/calmodulin.pdb
%%PORTDOCS%%share/tinker/test/calmodulin.seq
@@ -245,6 +248,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/diene.xyz
%%PORTDOCS%%share/tinker/test/dimethane.key
%%PORTDOCS%%share/tinker/test/dimethane.xyz
+%%PORTDOCS%%share/tinker/test/diwater.key
+%%PORTDOCS%%share/tinker/test/diwater.lin
+%%PORTDOCS%%share/tinker/test/diwater.xyz
%%PORTDOCS%%share/tinker/test/enkephalin.int
%%PORTDOCS%%share/tinker/test/enkephalin.key
%%PORTDOCS%%share/tinker/test/enkephalin.make
@@ -271,6 +277,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/form.xyz
%%PORTDOCS%%share/tinker/test/formbig.key
%%PORTDOCS%%share/tinker/test/formbig.xyz
+%%PORTDOCS%%share/tinker/test/formbox.dyn
%%PORTDOCS%%share/tinker/test/formbox.key
%%PORTDOCS%%share/tinker/test/formbox.xyz
%%PORTDOCS%%share/tinker/test/furan.int
@@ -292,6 +299,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/hexanes.key
%%PORTDOCS%%share/tinker/test/hexanes.run
%%PORTDOCS%%share/tinker/test/hexanes.xyz
+%%PORTDOCS%%share/tinker/test/hexanex.xyz
%%PORTDOCS%%share/tinker/test/imidazole.int
%%PORTDOCS%%share/tinker/test/imidazole.key
%%PORTDOCS%%share/tinker/test/imidazole.xyz
@@ -300,10 +308,14 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/imine.xyz
%%PORTDOCS%%share/tinker/test/lactam.key
%%PORTDOCS%%share/tinker/test/lactam.xyz
+%%PORTDOCS%%share/tinker/test/lipid.key
+%%PORTDOCS%%share/tinker/test/lipid.xyz
%%PORTDOCS%%share/tinker/test/melittin.key
%%PORTDOCS%%share/tinker/test/melittin.pdb
%%PORTDOCS%%share/tinker/test/melittin.seq
%%PORTDOCS%%share/tinker/test/melittin.xyz
+%%PORTDOCS%%share/tinker/test/membrane.key
+%%PORTDOCS%%share/tinker/test/membrane.xyz
%%PORTDOCS%%share/tinker/test/methane.int
%%PORTDOCS%%share/tinker/test/methane.key
%%PORTDOCS%%share/tinker/test/methane.xyz
@@ -314,6 +326,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/naphthalene.int
%%PORTDOCS%%share/tinker/test/naphthalene.key
%%PORTDOCS%%share/tinker/test/naphthalene.xyz
+%%PORTDOCS%%share/tinker/test/nitrogen.dyn
+%%PORTDOCS%%share/tinker/test/nitrogen.key
+%%PORTDOCS%%share/tinker/test/nitrogen.xyz
%%PORTDOCS%%share/tinker/test/nma.int
%%PORTDOCS%%share/tinker/test/nma.key
%%PORTDOCS%%share/tinker/test/nma.xyz
@@ -342,6 +357,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/peptide.xyz
%%PORTDOCS%%share/tinker/test/phenanth.key
%%PORTDOCS%%share/tinker/test/phenanth.xyz
+%%PORTDOCS%%share/tinker/test/pol3.key
+%%PORTDOCS%%share/tinker/test/pol3.xyz
%%PORTDOCS%%share/tinker/test/propane.key
%%PORTDOCS%%share/tinker/test/propane.ray
%%PORTDOCS%%share/tinker/test/propane.xyz
@@ -358,6 +375,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/pyrrole.xyz
%%PORTDOCS%%share/tinker/test/retinoic.key
%%PORTDOCS%%share/tinker/test/retinoic.xyz
+%%PORTDOCS%%share/tinker/test/skunk.key
+%%PORTDOCS%%share/tinker/test/skunk.xyz
%%PORTDOCS%%share/tinker/test/sterol.key
%%PORTDOCS%%share/tinker/test/sterol.xyz
%%PORTDOCS%%share/tinker/test/styrene.int
@@ -394,13 +413,16 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/watersmall.dyn
%%PORTDOCS%%share/tinker/test/watersmall.key
%%PORTDOCS%%share/tinker/test/watersmall.xyz
+%%PORTDOCS%%share/tinker/test/watertiny.dyn
+%%PORTDOCS%%share/tinker/test/watertiny.key
+%%PORTDOCS%%share/tinker/test/watertiny.xyz
%%PORTDOCS%%share/tinker/test/white.int
%%PORTDOCS%%share/tinker/test/white.key
%%PORTDOCS%%share/tinker/test/white.xyz
-%%PORTDOCS%%share/tinker/tinker.txt
+share/tinker/tinker.txt
%%PORTDOCS%%@dirrm share/doc/tinker
%%PORTDOCS%%@dirrm share/examples/tinker
%%PORTDOCS%%@dirrm share/tinker/bench
-%%PORTDOCS%%@dirrm share/tinker/params
+@dirrm share/tinker/params
%%PORTDOCS%%@dirrm share/tinker/test
-%%PORTDOCS%%@dirrm share/tinker
+@dirrm share/tinker
diff --git a/biology/tinker/pkg-plist.viewer b/biology/tinker/pkg-plist.viewer
index 851a2eccc975..98ee34b042da 100644
--- a/biology/tinker/pkg-plist.viewer
+++ b/biology/tinker/pkg-plist.viewer
@@ -14,6 +14,7 @@ bin/intxyz
bin/minimize
bin/minirot
bin/minrigid
+bin/monte
bin/newton
bin/newtrot
bin/nucleic
@@ -143,20 +144,19 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/bench/results-3.7
%%PORTDOCS%%share/tinker/bench/results-3.8
%%PORTDOCS%%share/tinker/bench/results-3.9
-%%PORTDOCS%%share/tinker/params/README
-%%PORTDOCS%%share/tinker/params/amber.prm
-%%PORTDOCS%%share/tinker/params/charmm.prm
-%%PORTDOCS%%share/tinker/params/dudek.prm
-%%PORTDOCS%%share/tinker/params/hoch.prm
-%%PORTDOCS%%share/tinker/params/mm2.prm
-%%PORTDOCS%%share/tinker/params/mm3.prm
-%%PORTDOCS%%share/tinker/params/mm3pro.prm
-%%PORTDOCS%%share/tinker/params/opls.prm
-%%PORTDOCS%%share/tinker/params/oplsaa.prm
-%%PORTDOCS%%share/tinker/params/smooth.prm
-%%PORTDOCS%%share/tinker/params/smoothaa.prm
-%%PORTDOCS%%share/tinker/params/water.prm
-%%PORTDOCS%%share/tinker/rasmol/rasmol.hlp
+share/tinker/params/README
+share/tinker/params/amber.prm
+share/tinker/params/charmm.prm
+share/tinker/params/hoch.prm
+share/tinker/params/mm2.prm
+share/tinker/params/mm3.prm
+share/tinker/params/mm3pro.prm
+share/tinker/params/opls.prm
+share/tinker/params/oplsaa.prm
+share/tinker/params/smooth.prm
+share/tinker/params/smoothaa.prm
+share/tinker/params/water.prm
+share/tinker/rasmol/rasmol.hlp
%%PORTDOCS%%share/tinker/test/README
%%PORTDOCS%%share/tinker/test/ala20.key
%%PORTDOCS%%share/tinker/test/ala20.xyz
@@ -187,6 +187,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/bowl2.xyz
%%PORTDOCS%%share/tinker/test/bowl3.key
%%PORTDOCS%%share/tinker/test/bowl3.xyz
+%%PORTDOCS%%share/tinker/test/bucky.int
+%%PORTDOCS%%share/tinker/test/bucky.key
+%%PORTDOCS%%share/tinker/test/bucky.xyz
%%PORTDOCS%%share/tinker/test/butane.int
%%PORTDOCS%%share/tinker/test/butane.key
%%PORTDOCS%%share/tinker/test/butane.xyz
@@ -207,12 +210,12 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/c5.key
%%PORTDOCS%%share/tinker/test/c5.seq
%%PORTDOCS%%share/tinker/test/c5.xyz
-%%PORTDOCS%%share/tinker/test/c7ax.key
-%%PORTDOCS%%share/tinker/test/c7ax.seq
-%%PORTDOCS%%share/tinker/test/c7ax.xyz
-%%PORTDOCS%%share/tinker/test/c7eq.key
-%%PORTDOCS%%share/tinker/test/c7eq.seq
-%%PORTDOCS%%share/tinker/test/c7eq.xyz
+%%PORTDOCS%%share/tinker/test/c7a.key
+%%PORTDOCS%%share/tinker/test/c7a.seq
+%%PORTDOCS%%share/tinker/test/c7a.xyz
+%%PORTDOCS%%share/tinker/test/c7e.key
+%%PORTDOCS%%share/tinker/test/c7e.seq
+%%PORTDOCS%%share/tinker/test/c7e.xyz
%%PORTDOCS%%share/tinker/test/calmodulin.key
%%PORTDOCS%%share/tinker/test/calmodulin.pdb
%%PORTDOCS%%share/tinker/test/calmodulin.seq
@@ -250,6 +253,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/diene.xyz
%%PORTDOCS%%share/tinker/test/dimethane.key
%%PORTDOCS%%share/tinker/test/dimethane.xyz
+%%PORTDOCS%%share/tinker/test/diwater.key
+%%PORTDOCS%%share/tinker/test/diwater.lin
+%%PORTDOCS%%share/tinker/test/diwater.xyz
%%PORTDOCS%%share/tinker/test/enkephalin.int
%%PORTDOCS%%share/tinker/test/enkephalin.key
%%PORTDOCS%%share/tinker/test/enkephalin.make
@@ -276,6 +282,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/form.xyz
%%PORTDOCS%%share/tinker/test/formbig.key
%%PORTDOCS%%share/tinker/test/formbig.xyz
+%%PORTDOCS%%share/tinker/test/formbox.dyn
%%PORTDOCS%%share/tinker/test/formbox.key
%%PORTDOCS%%share/tinker/test/formbox.xyz
%%PORTDOCS%%share/tinker/test/furan.int
@@ -297,6 +304,7 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/hexanes.key
%%PORTDOCS%%share/tinker/test/hexanes.run
%%PORTDOCS%%share/tinker/test/hexanes.xyz
+%%PORTDOCS%%share/tinker/test/hexanex.xyz
%%PORTDOCS%%share/tinker/test/imidazole.int
%%PORTDOCS%%share/tinker/test/imidazole.key
%%PORTDOCS%%share/tinker/test/imidazole.xyz
@@ -305,10 +313,14 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/imine.xyz
%%PORTDOCS%%share/tinker/test/lactam.key
%%PORTDOCS%%share/tinker/test/lactam.xyz
+%%PORTDOCS%%share/tinker/test/lipid.key
+%%PORTDOCS%%share/tinker/test/lipid.xyz
%%PORTDOCS%%share/tinker/test/melittin.key
%%PORTDOCS%%share/tinker/test/melittin.pdb
%%PORTDOCS%%share/tinker/test/melittin.seq
%%PORTDOCS%%share/tinker/test/melittin.xyz
+%%PORTDOCS%%share/tinker/test/membrane.key
+%%PORTDOCS%%share/tinker/test/membrane.xyz
%%PORTDOCS%%share/tinker/test/methane.int
%%PORTDOCS%%share/tinker/test/methane.key
%%PORTDOCS%%share/tinker/test/methane.xyz
@@ -319,6 +331,9 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/naphthalene.int
%%PORTDOCS%%share/tinker/test/naphthalene.key
%%PORTDOCS%%share/tinker/test/naphthalene.xyz
+%%PORTDOCS%%share/tinker/test/nitrogen.dyn
+%%PORTDOCS%%share/tinker/test/nitrogen.key
+%%PORTDOCS%%share/tinker/test/nitrogen.xyz
%%PORTDOCS%%share/tinker/test/nma.int
%%PORTDOCS%%share/tinker/test/nma.key
%%PORTDOCS%%share/tinker/test/nma.xyz
@@ -347,6 +362,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/peptide.xyz
%%PORTDOCS%%share/tinker/test/phenanth.key
%%PORTDOCS%%share/tinker/test/phenanth.xyz
+%%PORTDOCS%%share/tinker/test/pol3.key
+%%PORTDOCS%%share/tinker/test/pol3.xyz
%%PORTDOCS%%share/tinker/test/propane.key
%%PORTDOCS%%share/tinker/test/propane.ray
%%PORTDOCS%%share/tinker/test/propane.xyz
@@ -363,6 +380,8 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/pyrrole.xyz
%%PORTDOCS%%share/tinker/test/retinoic.key
%%PORTDOCS%%share/tinker/test/retinoic.xyz
+%%PORTDOCS%%share/tinker/test/skunk.key
+%%PORTDOCS%%share/tinker/test/skunk.xyz
%%PORTDOCS%%share/tinker/test/sterol.key
%%PORTDOCS%%share/tinker/test/sterol.xyz
%%PORTDOCS%%share/tinker/test/styrene.int
@@ -399,14 +418,17 @@ bin/xyzsybyl
%%PORTDOCS%%share/tinker/test/watersmall.dyn
%%PORTDOCS%%share/tinker/test/watersmall.key
%%PORTDOCS%%share/tinker/test/watersmall.xyz
+%%PORTDOCS%%share/tinker/test/watertiny.dyn
+%%PORTDOCS%%share/tinker/test/watertiny.key
+%%PORTDOCS%%share/tinker/test/watertiny.xyz
%%PORTDOCS%%share/tinker/test/white.int
%%PORTDOCS%%share/tinker/test/white.key
%%PORTDOCS%%share/tinker/test/white.xyz
-%%PORTDOCS%%share/tinker/tinker.txt
+share/tinker/tinker.txt
%%PORTDOCS%%@dirrm share/doc/tinker
%%PORTDOCS%%@dirrm share/examples/tinker
%%PORTDOCS%%@dirrm share/tinker/bench
-%%PORTDOCS%%@dirrm share/tinker/params
-%%PORTDOCS%%@dirrm share/tinker/rasmol
+@dirrm share/tinker/params
+@dirrm share/tinker/rasmol
%%PORTDOCS%%@dirrm share/tinker/test
-%%PORTDOCS%%@dirrm share/tinker
+@dirrm share/tinker