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authoredwin <edwin@FreeBSD.org>2002-11-07 21:45:17 +0800
committeredwin <edwin@FreeBSD.org>2002-11-07 21:45:17 +0800
commit1736281db22810d03ef7c31ec9144a74e12c2de8 (patch)
tree2452925128942691d21d0f2ef82bfa42a31f1e85 /biology
parent4771f38f3869be2c346a8c798b9753ff8f9e5898 (diff)
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Updated to fix problems as stated in PR ports/42915
PR: ports/42915 Submitted by: Tony Maher <tonym@biolateral.com.au>
Diffstat (limited to 'biology')
-rw-r--r--biology/primer3/Makefile1
-rw-r--r--biology/primer3/pkg-message41
-rw-r--r--biology/primer3/pkg-plist2
3 files changed, 42 insertions, 2 deletions
diff --git a/biology/primer3/Makefile b/biology/primer3/Makefile
index 077940ab8964..462fe8a50067 100644
--- a/biology/primer3/Makefile
+++ b/biology/primer3/Makefile
@@ -40,6 +40,7 @@ do-install:
.for file in ${DOCUMENTS}
@${INSTALL_DATA} ${WRKDIR}/${DISTNAME}/${file} ${DOCSDIR}
.endfor
+ @${RMDIR} ${WRKDIR}/${DISTNAME}/test/primer*_list_tmp
@${MKDIR} ${EXAMPLESDIR}
@cd ${WRKDIR}/${DISTNAME}/test && ${FIND} * | \
${CPIO} ${SHAREOWN}:${SHAREGRP} ${EXAMPLESDIR}
diff --git a/biology/primer3/pkg-message b/biology/primer3/pkg-message
new file mode 100644
index 000000000000..e0265f7c7892
--- /dev/null
+++ b/biology/primer3/pkg-message
@@ -0,0 +1,41 @@
+ Copyright (c) 1996,1997,1998
+ Whitehead Institute for Biomedical Research. All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+1. Redistributions must reproduce the above copyright notice, this
+list of conditions and the following disclaimer in the documentation
+and/or other materials provided with the distribution. Redistributions of
+source code must also reproduce this information in the source code itself.
+
+2. If the program is modified, redistributions must include a notice
+(in the same places as above) indicating that the redistributed program is
+not identical to the version distributed by Whitehead Institute.
+
+3. All advertising materials mentioning features or use of this
+software must display the following acknowledgment:
+ This product includes software developed by the
+ Whitehead Institute for Biomedical Research.
+
+4. The name of the Whitehead Institute may not be used to endorse or
+promote products derived from this software without specific prior written
+permission.
+
+We also request that use of this software be cited in publications as
+
+Steve Rozen, Helen J. Skaletsky (1996,1997,1998)
+ Primer3. Code available at
+ http://www-genome.wi.mit.edu/genome_software/other/primer3.html
+
+THIS SOFTWARE IS PROVIDED BY THE WHITEHEAD INSTITUTE ``AS IS'' AND ANY
+EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
+WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE WHITEHEAD INSTITUTE BE LIABLE FOR ANY
+DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
+(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT
+LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
+OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF
+SUCH DAMAGE.
diff --git a/biology/primer3/pkg-plist b/biology/primer3/pkg-plist
index 5a1733ccc9c0..874dec84c976 100644
--- a/biology/primer3/pkg-plist
+++ b/biology/primer3/pkg-plist
@@ -353,8 +353,6 @@ share/primer3/primer3_www_results_help.html
@dirrm share/primer3
%%PORTDOCS%%@dirrm share/doc/primer3/
%%PORTDOCS%%@dirrm share/examples/primer3/primer1_list_last
-%%PORTDOCS%%@dirrm share/examples/primer3/primer1_list_tmp
%%PORTDOCS%%@dirrm share/examples/primer3/primer_global_err
%%PORTDOCS%%@dirrm share/examples/primer3/primer_list_last
-%%PORTDOCS%%@dirrm share/examples/primer3/primer_list_tmp
%%PORTDOCS%%@dirrm share/examples/primer3/