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| author | brd <brd@FreeBSD.org> | 2015-04-10 23:39:01 +0800 |
|---|---|---|
| committer | brd <brd@FreeBSD.org> | 2015-04-10 23:39:01 +0800 |
| commit | cf639b6682dea07aa3e5f2057ff7e340c2436791 (patch) | |
| tree | 4577926b1945dfab86ca9ea306f94316557a2a07 /biology | |
| parent | 175577905046f7864d988f35e1fa155814a4ca31 (diff) | |
| download | freebsd-ports-gnome-cf639b6682dea07aa3e5f2057ff7e340c2436791.tar.gz freebsd-ports-gnome-cf639b6682dea07aa3e5f2057ff7e340c2436791.tar.zst freebsd-ports-gnome-cf639b6682dea07aa3e5f2057ff7e340c2436791.zip | |
Update biology/paml to 4.8a and unbreak.
PR: 199264
Submitted by: Joseph Mingrone <jrm@ftfl.ca>
Approved by: bdrewery (mentor)
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/paml/Makefile | 8 | ||||
| -rw-r--r-- | biology/paml/distinfo | 4 |
2 files changed, 5 insertions, 7 deletions
diff --git a/biology/paml/Makefile b/biology/paml/Makefile index cde5e4507ef9..03a7616be267 100644 --- a/biology/paml/Makefile +++ b/biology/paml/Makefile @@ -2,7 +2,7 @@ # $FreeBSD$ PORTNAME= paml -PORTVERSION= 4.8 +PORTVERSION= 4.8a CATEGORIES= biology MASTER_SITES= http://abacus.gene.ucl.ac.uk/software/ DISTNAME= ${PORTNAME}${PORTVERSION} @@ -10,10 +10,8 @@ DISTNAME= ${PORTNAME}${PORTVERSION} MAINTAINER= jrm@ftfl.ca COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML) -BROKEN= Unfetchable - USES= gmake tar:tgz -WRKSRC= ${WRKDIR}/${PORTNAME}${PORTVERSION}/src +WRKSRC= ${WRKDIR}/${PORTNAME}4.8/src MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}" BINARIES= baseml basemlg chi2 codeml evolver pamp yn00 @@ -27,7 +25,7 @@ do-install: .endfor @${MKDIR} ${STAGEDIR}${DOCSDIR} .for f in ${DOC_FILES} - ${INSTALL_DATA} ${WRKDIR}/${PORTNAME}${PORTVERSION}/doc/${f} ${STAGEDIR}${DOCSDIR} + ${INSTALL_DATA} ${WRKSRC}/../doc/${f} ${STAGEDIR}${DOCSDIR} .endfor .include <bsd.port.mk> diff --git a/biology/paml/distinfo b/biology/paml/distinfo index 585099df9353..da4a5bbf3895 100644 --- a/biology/paml/distinfo +++ b/biology/paml/distinfo @@ -1,2 +1,2 @@ -SHA256 (paml4.8.tgz) = 67498283308824cd5a3986db382bec275432e817f6719b8faf99fa2509f32781 -SIZE (paml4.8.tgz) = 4835110 +SHA256 (paml4.8a.tgz) = e45f37e1cfc1c24de276266a7bc2926fc12eac9602c56c1c025bc8f6dfb737f3 +SIZE (paml4.8a.tgz) = 5879158 |