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authordinoex <dinoex@FreeBSD.org>2009-07-31 21:57:52 +0800
committerdinoex <dinoex@FreeBSD.org>2009-07-31 21:57:52 +0800
commitffdf8b50b5fa0b45b4be6b17b68ced12a00bda87 (patch)
treedc822e3069a917f5b3a88de03796fcc0faf19e38 /biology
parent7ec01f0965b653c3825a249aefb8a9af64518880 (diff)
downloadfreebsd-ports-gnome-ffdf8b50b5fa0b45b4be6b17b68ced12a00bda87.tar.gz
freebsd-ports-gnome-ffdf8b50b5fa0b45b4be6b17b68ced12a00bda87.tar.zst
freebsd-ports-gnome-ffdf8b50b5fa0b45b4be6b17b68ced12a00bda87.zip
- bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
Requested by: edwin
Diffstat (limited to 'biology')
-rw-r--r--biology/L-Breeder/Makefile2
-rw-r--r--biology/embassy/Makefile1
-rw-r--r--biology/emboss/Makefile1
-rw-r--r--biology/genpak/Makefile2
-rw-r--r--biology/gperiodic/Makefile2
-rw-r--r--biology/lsysexp/Makefile2
-rw-r--r--biology/p5-Bio-Das/Makefile1
-rw-r--r--biology/p5-Bio-Graphics/Makefile1
-rw-r--r--biology/p5-Bio-Phylo/Makefile1
-rw-r--r--biology/p5-bioperl-run/Makefile1
-rw-r--r--biology/p5-bioperl/Makefile1
-rw-r--r--biology/seaview/Makefile2
-rw-r--r--biology/treeviewx/Makefile2
-rw-r--r--biology/xdrawchem/Makefile2
14 files changed, 14 insertions, 7 deletions
diff --git a/biology/L-Breeder/Makefile b/biology/L-Breeder/Makefile
index 07cbcf8f7393..78686deda56f 100644
--- a/biology/L-Breeder/Makefile
+++ b/biology/L-Breeder/Makefile
@@ -8,7 +8,7 @@
PORTNAME= LBreeder
PORTVERSION= 1.0
-PORTREVISION= 12
+PORTREVISION= 13
CATEGORIES= biology
MASTER_SITES= http://www.simonyi.ox.ac.uk/dawkins/software/yan/L-Breeder/
DISTNAME= ${PORTNAME}-source
diff --git a/biology/embassy/Makefile b/biology/embassy/Makefile
index 9a7dd461fbf3..f733887786ed 100644
--- a/biology/embassy/Makefile
+++ b/biology/embassy/Makefile
@@ -8,6 +8,7 @@
PORTNAME= embassy
PORTVERSION= 6.0.0
+PORTREVISION= 1
CATEGORIES= biology
MASTER_SITES= ftp://emboss.open-bio.org/pub/EMBOSS/ \
ftp://ftp.ebi.ac.uk/pub/software/unix/EMBOSS/
diff --git a/biology/emboss/Makefile b/biology/emboss/Makefile
index 3ee0b3f99814..6abea60a03f6 100644
--- a/biology/emboss/Makefile
+++ b/biology/emboss/Makefile
@@ -7,6 +7,7 @@
PORTNAME= emboss
PORTVERSION= 6.0.1
+PORTREVISION= 1
RELEASE= ${PORTNAME:U}-${PORTVERSION}
CATEGORIES= biology
MASTER_SITES= ftp://emboss.open-bio.org/pub/EMBOSS/ \
diff --git a/biology/genpak/Makefile b/biology/genpak/Makefile
index 980d303ab270..5b1ff0976afe 100644
--- a/biology/genpak/Makefile
+++ b/biology/genpak/Makefile
@@ -8,7 +8,7 @@
PORTNAME= genpak
PORTVERSION= 0.26
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= biology
MASTER_SITES= http://www.bioinformatics.org/genpak/download/
DISTNAME= gp-${PORTVERSION}
diff --git a/biology/gperiodic/Makefile b/biology/gperiodic/Makefile
index 2b68ba4a769a..a09c02eb9d33 100644
--- a/biology/gperiodic/Makefile
+++ b/biology/gperiodic/Makefile
@@ -7,7 +7,7 @@
PORTNAME= gperiodic
PORTVERSION= 2.0.10
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= biology
MASTER_SITES= http://www.frantz.fi/software/
diff --git a/biology/lsysexp/Makefile b/biology/lsysexp/Makefile
index 432b2e9d9883..9df827de0ea4 100644
--- a/biology/lsysexp/Makefile
+++ b/biology/lsysexp/Makefile
@@ -7,7 +7,7 @@
PORTNAME= lsysexp
PORTVERSION= 0.67
-PORTREVISION= 8
+PORTREVISION= 9
CATEGORIES= biology
MASTER_SITES= http://coscorrosa.com/programs/${PORTNAME}/download/ \
http://freebsd.unixfreunde.de/sources/
diff --git a/biology/p5-Bio-Das/Makefile b/biology/p5-Bio-Das/Makefile
index 51ff577439ad..2ba319e1b0c8 100644
--- a/biology/p5-Bio-Das/Makefile
+++ b/biology/p5-Bio-Das/Makefile
@@ -7,6 +7,7 @@
PORTNAME= Bio-Das
PORTVERSION= 1.11
+PORTREVISION= 1
CATEGORIES= biology perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
diff --git a/biology/p5-Bio-Graphics/Makefile b/biology/p5-Bio-Graphics/Makefile
index b14efc89e996..91547c38a5ba 100644
--- a/biology/p5-Bio-Graphics/Makefile
+++ b/biology/p5-Bio-Graphics/Makefile
@@ -7,6 +7,7 @@
PORTNAME= Bio-Graphics
PORTVERSION= 1.97
+PORTREVISION= 1
CATEGORIES= biology perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
diff --git a/biology/p5-Bio-Phylo/Makefile b/biology/p5-Bio-Phylo/Makefile
index 695cbd958f00..e06af61a720a 100644
--- a/biology/p5-Bio-Phylo/Makefile
+++ b/biology/p5-Bio-Phylo/Makefile
@@ -7,6 +7,7 @@
PORTNAME= Bio-Phylo
PORTVERSION= 0.16
+PORTREVISION= 1
CATEGORIES= biology perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
diff --git a/biology/p5-bioperl-run/Makefile b/biology/p5-bioperl-run/Makefile
index 679c9ca1af79..73a7d10a10f3 100644
--- a/biology/p5-bioperl-run/Makefile
+++ b/biology/p5-bioperl-run/Makefile
@@ -7,6 +7,7 @@
PORTNAME= bioperl-run
PORTVERSION= 1.6.1
+PORTREVISION= 1
CATEGORIES= biology perl5
MASTER_SITES= http://bioperl.org/DIST/ \
CPAN
diff --git a/biology/p5-bioperl/Makefile b/biology/p5-bioperl/Makefile
index 927f1a507fdc..b4c084b61af1 100644
--- a/biology/p5-bioperl/Makefile
+++ b/biology/p5-bioperl/Makefile
@@ -7,6 +7,7 @@
PORTNAME= bioperl
PORTVERSION= 1.6.0
+PORTREVISION= 1
CATEGORIES= biology perl5
MASTER_SITES= http://bioperl.org/DIST/ \
CPAN
diff --git a/biology/seaview/Makefile b/biology/seaview/Makefile
index 38523c3f3f78..9d793ce45563 100644
--- a/biology/seaview/Makefile
+++ b/biology/seaview/Makefile
@@ -8,7 +8,7 @@
PORTNAME= seaview
PORTVERSION= 2006.02.13
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= biology
MASTER_SITES= ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/seaview/archive/
DISTNAME= ${PORTNAME}${PORTVERSION:S/.//g}
diff --git a/biology/treeviewx/Makefile b/biology/treeviewx/Makefile
index 189ba3dc4b13..6ad2386fba81 100644
--- a/biology/treeviewx/Makefile
+++ b/biology/treeviewx/Makefile
@@ -8,7 +8,7 @@
PORTNAME= treeviewx
PORTVERSION= 0.5.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= biology
MASTER_SITES= http://darwin.zoology.gla.ac.uk/~rpage/treeviewx/download/${PORTVERSION:S/.1//}/
DISTNAME= tv-${PORTVERSION}
diff --git a/biology/xdrawchem/Makefile b/biology/xdrawchem/Makefile
index ec6b8f52383e..4ac915ed3adb 100644
--- a/biology/xdrawchem/Makefile
+++ b/biology/xdrawchem/Makefile
@@ -7,7 +7,7 @@
PORTNAME= xdrawchem
PORTVERSION= 1.9.9
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= biology
MASTER_SITES= SF