diff options
| author | danilo <danilo@FreeBSD.org> | 2017-02-25 02:57:56 +0800 |
|---|---|---|
| committer | danilo <danilo@FreeBSD.org> | 2017-02-25 02:57:56 +0800 |
| commit | 6a04a88cd72dd2e1def0c91848447c25569a4954 (patch) | |
| tree | 64b0bbd8dc8a3e22e2fb16f81b419b38efb4b30f /biology | |
| parent | 1df1f5ea84697b6199852d78b165908223b8bba0 (diff) | |
| download | freebsd-ports-gnome-6a04a88cd72dd2e1def0c91848447c25569a4954.tar.gz freebsd-ports-gnome-6a04a88cd72dd2e1def0c91848447c25569a4954.tar.zst freebsd-ports-gnome-6a04a88cd72dd2e1def0c91848447c25569a4954.zip | |
- Update to 1.14.9
- Use github
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/iolib/Makefile | 9 | ||||
| -rw-r--r-- | biology/iolib/distinfo | 5 | ||||
| -rw-r--r-- | biology/iolib/pkg-plist | 4 |
3 files changed, 12 insertions, 6 deletions
diff --git a/biology/iolib/Makefile b/biology/iolib/Makefile index f654330e7949..15d20af4ced7 100644 --- a/biology/iolib/Makefile +++ b/biology/iolib/Makefile @@ -2,9 +2,8 @@ # $FreeBSD$ PORTNAME= io_lib -PORTVERSION= 1.14.8 +PORTVERSION= 1.14.9 CATEGORIES= biology -MASTER_SITES= SF/staden/${PORTNAME}/${PORTVERSION} MAINTAINER= danilo@FreeBSD.org COMMENT= General purpose trace file (and Experiment File) reading interface @@ -13,7 +12,11 @@ LICENSE= BSD3CLAUSE LIB_DEPENDS= libcurl.so:ftp/curl -USES= gmake libtool +USE_GITHUB= yes +GH_ACCOUNT= jkbonfield +GH_TAGNAME= ${PORTNAME}-${PORTVERSION:S/./-/g} + +USES= autoreconf gmake libtool GNU_CONFIGURE= yes USE_LDCONFIG= yes INSTALL_TARGET= install-strip diff --git a/biology/iolib/distinfo b/biology/iolib/distinfo index f1ed9aab3a30..09b0421f4408 100644 --- a/biology/iolib/distinfo +++ b/biology/iolib/distinfo @@ -1,2 +1,3 @@ -SHA256 (io_lib-1.14.8.tar.gz) = 3bd560309fd6d70b14bbb8230e1baf8706b804eb6201220bb6c3d6db72003d1b -SIZE (io_lib-1.14.8.tar.gz) = 2217122 +TIMESTAMP = 1487946049 +SHA256 (jkbonfield-io_lib-1.14.9-io_lib-1-14-9_GH0.tar.gz) = 077044d525e9dd76f94ee83b0ab19cd655b08348cc81bbdaa84e39c622280a4a +SIZE (jkbonfield-io_lib-1.14.9-io_lib-1-14-9_GH0.tar.gz) = 1396092 diff --git a/biology/iolib/pkg-plist b/biology/iolib/pkg-plist index 3a27cee23282..9a02ed48c5ea 100644 --- a/biology/iolib/pkg-plist +++ b/biology/iolib/pkg-plist @@ -1,6 +1,7 @@ bin/append_sff bin/convert_trace bin/cram_dump +bin/cram_filter bin/cram_index bin/cram_size bin/extract_fastq @@ -39,6 +40,7 @@ include/io_lib/abi.h include/io_lib/alf.h include/io_lib/array.h include/io_lib/bam.h +include/io_lib/bgzip.h include/io_lib/binning.h include/io_lib/compress.h include/io_lib/compression.h @@ -86,7 +88,7 @@ include/io_lib/ztr.h lib/libstaden-read.a lib/libstaden-read.so lib/libstaden-read.so.11 -lib/libstaden-read.so.11.0.6 +lib/libstaden-read.so.11.1.0 man/man1/scramble.1.gz man/man1/srf2fasta.1.gz man/man1/srf2fastq.1.gz |