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authormnag <mnag@FreeBSD.org>2005-11-10 09:21:42 +0800
committermnag <mnag@FreeBSD.org>2005-11-10 09:21:42 +0800
commit8e17bcf98af91ff15bfbca60677dd7d7050d1250 (patch)
tree62068b1cd95997ad4ebfd0ed004d8fc962dfd61b /biology
parent8450f8c1b81c2ffa555f732946b860b5631aa1af (diff)
downloadfreebsd-ports-gnome-8e17bcf98af91ff15bfbca60677dd7d7050d1250.tar.gz
freebsd-ports-gnome-8e17bcf98af91ff15bfbca60677dd7d7050d1250.tar.zst
freebsd-ports-gnome-8e17bcf98af91ff15bfbca60677dd7d7050d1250.zip
Update to 3.14b
Update MASTER_SITES Add SHA256 Remove extra TABS PR: 88007 Submitted by: Jean Milanez Melo <jmelo@freebsdbrasil.com.br> Approved by: maintainer timeout, 14 days
Diffstat (limited to 'biology')
-rw-r--r--biology/paml/Makefile15
-rw-r--r--biology/paml/distinfo5
2 files changed, 11 insertions, 9 deletions
diff --git a/biology/paml/Makefile b/biology/paml/Makefile
index f90ac33a2ac3..fe2cd7a1e225 100644
--- a/biology/paml/Makefile
+++ b/biology/paml/Makefile
@@ -6,27 +6,28 @@
#
PORTNAME= paml
-PORTVERSION= 3.14
+PORTVERSION= 3.14b
CATEGORIES= biology
-MASTER_SITES= ftp://abacus.gene.ucl.ac.uk/pub/paml/
+MASTER_SITES= http://abacus.gene.ucl.ac.uk/software/
DISTNAME= ${PORTNAME}${PORTVERSION}
MAINTAINER= dbader@eece.unm.edu
COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML)
-WRKSRC= ${WRKDIR}/${DISTNAME}/src
+USE_GMAKE= YES
+WRKSRC= ${WRKDIR}/${DISTNAME:S/b//g}/src
MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}"
BINARIES= baseml basemlg chi2 codeml evolver pamp yn00
do-install:
.for f in ${BINARIES}
- ${INSTALL_PROGRAM} ${WRKSRC}/${f} ${PREFIX}/bin
+ ${INSTALL_PROGRAM} ${WRKSRC}/${f} ${PREFIX}/bin
.endfor
.if !defined(NOPORTDOCS)
- ${MKDIR} ${DOCSDIR}
- ${INSTALL_DATA} ${WRKDIR}/${DISTNAME}/doc/pamlDOC.pdf \
- ${DOCSDIR}
+ ${MKDIR} ${DOCSDIR}
+ ${INSTALL_DATA} ${WRKDIR}/${DISTNAME:S/b//g}/doc/pamlDOC.pdf \
+ ${DOCSDIR}
.endif
.include <bsd.port.mk>
diff --git a/biology/paml/distinfo b/biology/paml/distinfo
index 3f60e93bbeb3..953e3f3968aa 100644
--- a/biology/paml/distinfo
+++ b/biology/paml/distinfo
@@ -1,2 +1,3 @@
-MD5 (paml3.14.tar.gz) = 233ef39b09e406dc41fb81e14997b764
-SIZE (paml3.14.tar.gz) = 1744383
+MD5 (paml3.14b.tar.gz) = d71938de2a7d9828fb85ad2e83880a68
+SHA256 (paml3.14b.tar.gz) = 94846ded37b155852aae382294da3c4032c5a7646c6fa4e9deee32ffb9121506
+SIZE (paml3.14b.tar.gz) = 2144978