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author | edwin <edwin@FreeBSD.org> | 2006-05-04 07:26:35 +0800 |
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committer | edwin <edwin@FreeBSD.org> | 2006-05-04 07:26:35 +0800 |
commit | a9dd0eabfae8b9097f199b1d5e92ff53d5cffe99 (patch) | |
tree | 26f37b3f05f13c2831ea8168111fba49fa4d016b /biology | |
parent | 2389a1377e9ea59d1379c24641e52029e66cef5b (diff) | |
download | freebsd-ports-gnome-a9dd0eabfae8b9097f199b1d5e92ff53d5cffe99.tar.gz freebsd-ports-gnome-a9dd0eabfae8b9097f199b1d5e92ff53d5cffe99.tar.zst freebsd-ports-gnome-a9dd0eabfae8b9097f199b1d5e92ff53d5cffe99.zip |
Remove USE_REINPLACE from all categories starting with B
Diffstat (limited to 'biology')
-rw-r--r-- | biology/L-Breeder/Makefile | 1 | ||||
-rw-r--r-- | biology/ariadne/Makefile | 1 | ||||
-rw-r--r-- | biology/avida/Makefile | 1 | ||||
-rw-r--r-- | biology/crimap/Makefile | 1 | ||||
-rw-r--r-- | biology/distribfold/Makefile | 1 | ||||
-rw-r--r-- | biology/dna-qc/Makefile | 1 | ||||
-rw-r--r-- | biology/garlic/Makefile | 1 | ||||
-rw-r--r-- | biology/gff2ps/Makefile | 1 | ||||
-rw-r--r-- | biology/gperiodic/Makefile | 1 | ||||
-rw-r--r-- | biology/grappa/Makefile | 1 | ||||
-rw-r--r-- | biology/libgenome/Makefile | 1 | ||||
-rw-r--r-- | biology/lsysexp/Makefile | 1 | ||||
-rw-r--r-- | biology/migrate/Makefile | 1 | ||||
-rw-r--r-- | biology/molden/Makefile | 1 | ||||
-rw-r--r-- | biology/povchem/Makefile | 1 | ||||
-rw-r--r-- | biology/primer3/Makefile | 1 | ||||
-rw-r--r-- | biology/pymol/Makefile | 1 | ||||
-rw-r--r-- | biology/sim4/Makefile | 2 | ||||
-rw-r--r-- | biology/tinker/Makefile | 1 | ||||
-rw-r--r-- | biology/wise/Makefile | 1 | ||||
-rw-r--r-- | biology/xdrawchem/Makefile | 1 |
21 files changed, 0 insertions, 22 deletions
diff --git a/biology/L-Breeder/Makefile b/biology/L-Breeder/Makefile index 3ba614d356e7..0558ca4a31c0 100644 --- a/biology/L-Breeder/Makefile +++ b/biology/L-Breeder/Makefile @@ -26,7 +26,6 @@ USE_ZIP= yes USE_X_PREFIX= yes USE_GL= yes USE_GMAKE= yes -USE_REINPLACE= yes WX_CONFIG= ${X11BASE}/bin/wxgtk2-2.4-config diff --git a/biology/ariadne/Makefile b/biology/ariadne/Makefile index e477b5a3fd31..d271b5877e86 100644 --- a/biology/ariadne/Makefile +++ b/biology/ariadne/Makefile @@ -16,7 +16,6 @@ COMMENT= Programs to compare protein sequences and profiles WRKSRC= ${WRKDIR}/SRC-${PORTVERSION} USE_GMAKE= yes -USE_REINPLACE= yes post-patch: @${REINPLACE_CMD} -e 's|-lpthread|${PTHREAD_LIBS}| ; \ diff --git a/biology/avida/Makefile b/biology/avida/Makefile index 825a3dc3b317..475e81256547 100644 --- a/biology/avida/Makefile +++ b/biology/avida/Makefile @@ -19,7 +19,6 @@ GNU_CONFIGURE= yes CONFIGURE_ARGS= --enable-standard-prefix --datadir=${DATADIR} --enable-viewer CONFIGURE_TARGET= --build=${MACHINE_ARCH}-portbld-freebsd${OSREL} USE_PERL5_BUILD= yes -USE_REINPLACE= yes .if !defined(WITHOUT_QT) BUILD_DEPENDS+= qmake:${PORTSDIR}/devel/qmake diff --git a/biology/crimap/Makefile b/biology/crimap/Makefile index 8a0bd108e72c..90d5d8ca2400 100644 --- a/biology/crimap/Makefile +++ b/biology/crimap/Makefile @@ -16,7 +16,6 @@ MAINTAINER= tonymaher@optusnet.com.au COMMENT= Creation of multilocus linkage maps NO_WRKSUBDIR= true -USE_REINPLACE= yes PROGRAMS= crimap EXAMPLES= chr7a.gen demo.dat diff --git a/biology/distribfold/Makefile b/biology/distribfold/Makefile index ad0b77d8f747..eda101ddfffa 100644 --- a/biology/distribfold/Makefile +++ b/biology/distribfold/Makefile @@ -17,7 +17,6 @@ COMMENT= distributedfolding.org distributed protein folding project ONLY_FOR_ARCHS= i386 USE_BZIP2= yes -USE_REINPLACE= yes USE_SIZE= yes NO_BUILD= yes diff --git a/biology/dna-qc/Makefile b/biology/dna-qc/Makefile index b0a25b290cdb..6713757fec88 100644 --- a/biology/dna-qc/Makefile +++ b/biology/dna-qc/Makefile @@ -16,7 +16,6 @@ MAINTAINER= tonymaher@optusnet.com.au COMMENT= A quality control algorithm for DNA sequencing projects NO_WRKSUBDIR= true -USE_REINPLACE= yes EXAMPLES= README script.compare script.limits \ bact.all chromosomeIII.all human.all worm.all diff --git a/biology/garlic/Makefile b/biology/garlic/Makefile index cf78c720cec9..7a6a15a906d3 100644 --- a/biology/garlic/Makefile +++ b/biology/garlic/Makefile @@ -19,7 +19,6 @@ MAINTAINER= maho@FreeBSD.org COMMENT= Molecular viewer, editor and visualization program USE_XLIB= yes -USE_REINPLACE= yes USE_GMAKE= yes ALL_TARGET= # empty diff --git a/biology/gff2ps/Makefile b/biology/gff2ps/Makefile index c08892b2ffb2..1c18e7452eb0 100644 --- a/biology/gff2ps/Makefile +++ b/biology/gff2ps/Makefile @@ -20,7 +20,6 @@ RUN_DEPENDS= gawk:${PORTSDIR}/lang/gawk \ GFF2PS_MAN= MANUAL_GFF2PS_v0.96.ps PATCH_WRKSRC= ${WRKDIR} -USE_REINPLACE= yes NO_BUILD= yes diff --git a/biology/gperiodic/Makefile b/biology/gperiodic/Makefile index 2ab83b0c3bb0..9350895de9ab 100644 --- a/biology/gperiodic/Makefile +++ b/biology/gperiodic/Makefile @@ -16,7 +16,6 @@ COMMENT= Displays a periodic table of the elements USE_X_PREFIX= yes USE_GNOME= gnomehier gtk20 -USE_REINPLACE= yes ALL_TARGET= ${PORTNAME} LANGS= da fr pl sv tr diff --git a/biology/grappa/Makefile b/biology/grappa/Makefile index f3bc53433373..c6df3203e160 100644 --- a/biology/grappa/Makefile +++ b/biology/grappa/Makefile @@ -15,7 +15,6 @@ MAINTAINER= dbader@ece.unm.edu COMMENT= Genome Rearrangements Analysis and Phylogeny Software USE_GMAKE= yes -USE_REINPLACE= yes PLIST_FILES= bin/grappa bin/invdist bin/distmat diff --git a/biology/libgenome/Makefile b/biology/libgenome/Makefile index 0347c45423cb..6b8f7312125b 100644 --- a/biology/libgenome/Makefile +++ b/biology/libgenome/Makefile @@ -17,7 +17,6 @@ MAINTAINER= ports@FreeBSD.org COMMENT= Toolkit for developing bioinformatic related software in C++ WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION} -USE_REINPLACE= yes GNU_CONFIGURE= yes CONFIGURE_TARGET= --build=${MACHINE_ARCH}-portbld-freebsd${OSREL} INSTALLS_SHLIB= yes diff --git a/biology/lsysexp/Makefile b/biology/lsysexp/Makefile index e4ef4392b83c..839d1d681214 100644 --- a/biology/lsysexp/Makefile +++ b/biology/lsysexp/Makefile @@ -19,7 +19,6 @@ WRKSRC= ${WRKDIR}/lsysexp-0.67 USE_X_PREFIX= yes USE_GNOME= gtk20 GNU_CONFIGURE= yes -USE_REINPLACE= yes post-patch: @${REINPLACE_CMD} -e \ diff --git a/biology/migrate/Makefile b/biology/migrate/Makefile index a2d2d78e74b2..351bc6e5966b 100644 --- a/biology/migrate/Makefile +++ b/biology/migrate/Makefile @@ -17,7 +17,6 @@ COMMENT= A program to estimate population sizes and migration rates WRKSRC= ${WRKDIR}/${PORTNAME}-${PORTVERSION}/src GNU_CONFIGURE= yes CONFIGURE_TARGET= --build=${MACHINE_ARCH}-portbld-freebsd${OSREL} -USE_REINPLACE= yes MAN1= migrate.1 MLINKS= migrate.1 migrate-n.1 diff --git a/biology/molden/Makefile b/biology/molden/Makefile index c3cccad52deb..0e2fd306947c 100644 --- a/biology/molden/Makefile +++ b/biology/molden/Makefile @@ -25,7 +25,6 @@ RESTRICTED= "free for academic, non profit usage;" NO_CDROM= "Do not re-distribute source and executable." NO_PACKAGE= "Though the source codes are accessible, the author is hoping for distribution in an original form." MAKEFILE= ${WRKSRC}/makefile -USE_REINPLACE= yes .include <bsd.port.pre.mk> diff --git a/biology/povchem/Makefile b/biology/povchem/Makefile index bfcc9a1ddfae..0536e1e852a8 100644 --- a/biology/povchem/Makefile +++ b/biology/povchem/Makefile @@ -20,7 +20,6 @@ COMMENT= Simple yet powerful tool to generate POV from a PDB file RUN_DEPENDS= povray:${PORTSDIR}/graphics/povray NO_WRKSUBDIR= yes -USE_REINPLACE= yes DIST_SUBDIR= povchem DEFS= -DDATADIR=\"${PREFIX}/share/povchem\" \ diff --git a/biology/primer3/Makefile b/biology/primer3/Makefile index 75c8d91bcb20..08497fbb4b15 100644 --- a/biology/primer3/Makefile +++ b/biology/primer3/Makefile @@ -14,7 +14,6 @@ DISTNAME= ${PORTNAME}_${PORTVERSION} MAINTAINER= tonymaher@optusnet.com.au COMMENT= Primer3 helps to choose primers for PCR reactions -USE_REINPLACE= yes WRKSRC= ${WRKDIR}/${DISTNAME}/src DOCUMENTS= README example diff --git a/biology/pymol/Makefile b/biology/pymol/Makefile index bf0094db674e..9cf17a38e4b1 100644 --- a/biology/pymol/Makefile +++ b/biology/pymol/Makefile @@ -24,7 +24,6 @@ LIB_DEPENDS= glut.4:${PORTSDIR}/graphics/libglut \ WRKSRC= ${WRKDIR}/pymol-${PORTVERSION} USE_GMAKE= yes -USE_REINPLACE= yes USE_PYTHON= yes .include <bsd.port.pre.mk> diff --git a/biology/sim4/Makefile b/biology/sim4/Makefile index 7864d6efa064..c447e8a7d12a 100644 --- a/biology/sim4/Makefile +++ b/biology/sim4/Makefile @@ -16,8 +16,6 @@ COMMENT= An algorithm for aligning expressed DNA with genomic sequences WRKSRC= ${WRKDIR}/sim4.${PORTVERSION:S/./-/g} -USE_REINPLACE= yes - ALL_TARGET= sim4 PLIST_FILES= bin/sim4 diff --git a/biology/tinker/Makefile b/biology/tinker/Makefile index 0b6f614787d9..9fb00255526f 100644 --- a/biology/tinker/Makefile +++ b/biology/tinker/Makefile @@ -24,7 +24,6 @@ WRKSRC= ${WRKDIR}/tinker/source MAKEFILE= ${WRKDIR}/tinker/make/Makefile ALL_TARGET= all listing INSTALL_TARGET= rename -USE_REINPLACE= yes RESTRICTED= author requests no distribution except from his FTP site DOCS= README *.pdf *.txt release* diff --git a/biology/wise/Makefile b/biology/wise/Makefile index ca6d025b93a1..67cd27884d80 100644 --- a/biology/wise/Makefile +++ b/biology/wise/Makefile @@ -16,7 +16,6 @@ COMMENT= Intelligent algorithms for DNA searches WRKTOP= ${WRKDIR}/${DISTNAME} WRKSRC= ${WRKTOP}/src -USE_REINPLACE= yes MAKEFILE= makefile # diff --git a/biology/xdrawchem/Makefile b/biology/xdrawchem/Makefile index 5367b90326d1..98f2d8bf6f44 100644 --- a/biology/xdrawchem/Makefile +++ b/biology/xdrawchem/Makefile @@ -28,7 +28,6 @@ QTCFGLIBS+= ${PTHREAD_LIBS} QTCPPFLAGS+= ${PTHREAD_CFLAGS} USE_GMAKE= yes USE_QT_VER= 3 -USE_REINPLACE= yes USE_X_PREFIX= yes pre-configure: |