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author | rene <rene@FreeBSD.org> | 2013-07-27 03:19:20 +0800 |
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committer | rene <rene@FreeBSD.org> | 2013-07-27 03:19:20 +0800 |
commit | c945ab9477002608dac69f344be7d3f1f1b7d511 (patch) | |
tree | 4c98d494bc4532b5dd5b19f4e47bcb3babf104c2 /biology | |
parent | 16876857cc4291ce83cf938fde7ea3a988e9a904 (diff) | |
download | freebsd-ports-gnome-c945ab9477002608dac69f344be7d3f1f1b7d511.tar.gz freebsd-ports-gnome-c945ab9477002608dac69f344be7d3f1f1b7d511.tar.zst freebsd-ports-gnome-c945ab9477002608dac69f344be7d3f1f1b7d511.zip |
KDE3 and QT3 expired on 2013-07-01, remove these ports.
Unfortunately, this also affects some ports using QT3 as a GUI toolkit.
Changes to infrastructure files:
- bsd.kde.mk : obsolete, remove
- bsd.qt.mk : note that a CONFLICTS_BUILD line can probably go after a while
- CHANGES : document the removals from bsd.port.mk
- KNOBS : remove KDE and QT (KDE4 and QT4 should be used instead)
- MOVED : add the removed ports
PR: ports/180745
Submitted by: rene
Approved by: portmgr (bapt)
Exp-run by: bapt
Diffstat (limited to 'biology')
-rw-r--r-- | biology/Makefile | 1 | ||||
-rw-r--r-- | biology/xdrawchem/Makefile | 37 | ||||
-rw-r--r-- | biology/xdrawchem/distinfo | 2 | ||||
-rw-r--r-- | biology/xdrawchem/files/patch-xdrawchem__application_ob.cpp | 11 | ||||
-rw-r--r-- | biology/xdrawchem/pkg-descr | 10 | ||||
-rw-r--r-- | biology/xdrawchem/pkg-plist | 126 |
6 files changed, 0 insertions, 187 deletions
diff --git a/biology/Makefile b/biology/Makefile index fd8298b4944d..fefff2cc9379 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -97,7 +97,6 @@ SUBDIR += ugene SUBDIR += velvet SUBDIR += wise - SUBDIR += xdrawchem SUBDIR += xmolwt .include <bsd.port.subdir.mk> diff --git a/biology/xdrawchem/Makefile b/biology/xdrawchem/Makefile deleted file mode 100644 index 84c7671d5bad..000000000000 --- a/biology/xdrawchem/Makefile +++ /dev/null @@ -1,37 +0,0 @@ -# Created by: trevor -# $FreeBSD$ - -PORTNAME= xdrawchem -PORTVERSION= 1.9.9 -PORTREVISION= 11 -CATEGORIES= biology -MASTER_SITES= SF - -MAINTAINER= hemi@puresimplicity.net -COMMENT= Chemical drawing program - -LIB_DEPENDS= openbabel:${PORTSDIR}/science/openbabel - -GNU_CONFIGURE= yes -USE_GMAKE= yes -USE_QT_VER= 3 - -CONFIGURE_ENV= QTINCDIR="${LOCALBASE}/include" \ - QTLIBDIR="${LOCALBASE}/lib" -LDFLAGS+= -lm - -MAKE_ARGS+= LDFLAGS+="-lqt-mt ${PTHREAD_LIBS}" - -.include <bsd.port.pre.mk> - -.if ${ARCH}==sparc64 -BROKEN= does not compile on ${ARCH} -.endif - -post-patch: - @${REINPLACE_CMD} -e \ - 's|malloc\.h|stdlib.h|g' ${WRKSRC}/xdrawchem/application_ob.cpp - @${REINPLACE_CMD} -e \ - 's|lround|(long int)rint|g' ${WRKSRC}/xdrawchem/*.cpp - -.include <bsd.port.post.mk> diff --git a/biology/xdrawchem/distinfo b/biology/xdrawchem/distinfo deleted file mode 100644 index 3da28cf44601..000000000000 --- a/biology/xdrawchem/distinfo +++ /dev/null @@ -1,2 +0,0 @@ -SHA256 (xdrawchem-1.9.9.tar.gz) = 33e45ee8b937ba4ea77fb28adca66195943715a941039a95d0a4bed09d4cf9e3 -SIZE (xdrawchem-1.9.9.tar.gz) = 982481 diff --git a/biology/xdrawchem/files/patch-xdrawchem__application_ob.cpp b/biology/xdrawchem/files/patch-xdrawchem__application_ob.cpp deleted file mode 100644 index 493499d74c7c..000000000000 --- a/biology/xdrawchem/files/patch-xdrawchem__application_ob.cpp +++ /dev/null @@ -1,11 +0,0 @@ ---- ./xdrawchem/application_ob.cpp.orig 2005-11-30 03:47:14.000000000 +0000 -+++ ./xdrawchem/application_ob.cpp 2012-10-30 14:37:35.092762310 +0000 -@@ -87,7 +87,7 @@ - OBFormat *inFormat = NULL; - - if (infilter.left(2) == "--") { -- inFormat = Conv.FormatFromExt(infile); -+ inFormat = Conv.FormatFromExt(infile.ascii()); - if (inFormat == NULL) { - QMessageBox::warning( 0, tr("Could not determine file type"), - tr("Please select a file type from the list.") ); diff --git a/biology/xdrawchem/pkg-descr b/biology/xdrawchem/pkg-descr deleted file mode 100644 index 3f28ca7a0fa1..000000000000 --- a/biology/xdrawchem/pkg-descr +++ /dev/null @@ -1,10 +0,0 @@ -from the Web page and the Freshmeat listing: - -XDrawChem is a program for drawing chemical structures in two -dimensions. It comes with a library of amino acids and nucleic -acids. It can read and write MDL Molfiles, read and write CML -(Chemical Markup Language), read (some?) ChemDraw XML and binary -files, and export to EPS. It can predict 13C NMR and simple IR -spectra. It works under Unix or Windows. - -WWW: http://xdrawchem.sourceforge.net diff --git a/biology/xdrawchem/pkg-plist b/biology/xdrawchem/pkg-plist deleted file mode 100644 index a677daf12969..000000000000 --- a/biology/xdrawchem/pkg-plist +++ /dev/null @@ -1,126 +0,0 @@ -bin/xdrawchem -%%DATADIR%%/6ring_boat.cml -%%DATADIR%%/6ring_chair.cml -%%DATADIR%%/adenine.cml -%%DATADIR%%/alanine.cml -%%DATADIR%%/anthracene.cml -%%DATADIR%%/arginine.cml -%%DATADIR%%/asparagine.cml -%%DATADIR%%/aspartic_acid.cml -%%DATADIR%%/back.xpm -%%DATADIR%%/benzene.cml -%%DATADIR%%/benzene.png -%%DATADIR%%/biotin.cml -%%DATADIR%%/biphenyl.cml -%%DATADIR%%/boc.cml -%%DATADIR%%/caslist.txt -%%DATADIR%%/cyclobutane.cml -%%DATADIR%%/cycloheptane.cml -%%DATADIR%%/cyclohexane.cml -%%DATADIR%%/cyclohexane.png -%%DATADIR%%/cyclooctane.cml -%%DATADIR%%/cyclopentadiene-sp.cml -%%DATADIR%%/cyclopentadiene.cml -%%DATADIR%%/cyclopentane.cml -%%DATADIR%%/cyclopentane.png -%%DATADIR%%/cyclopropane.cml -%%DATADIR%%/cysteine.cml -%%DATADIR%%/cytosine.cml -%%DATADIR%%/d-fructose.cml -%%DATADIR%%/d-glucose.cml -%%DATADIR%%/dabcyl.cml -%%DATADIR%%/dabsyl.cml -%%DATADIR%%/dansyl.cml -%%DATADIR%%/deoxyribose.cml -%%DATADIR%%/doc/COPYRIGHT.txt -%%DATADIR%%/doc/GPL.txt -%%DATADIR%%/doc/HISTORY.txt -%%DATADIR%%/doc/arrowtool.png -%%DATADIR%%/doc/boldtool.png -%%DATADIR%%/doc/brackettool.png -%%DATADIR%%/doc/cinna.png -%%DATADIR%%/doc/color_pulldown.png -%%DATADIR%%/doc/copytool.png -%%DATADIR%%/doc/curvearrowtool.png -%%DATADIR%%/doc/cuttool.png -%%DATADIR%%/doc/dashtool.png -%%DATADIR%%/doc/downtool.png -%%DATADIR%%/doc/draw.html -%%DATADIR%%/doc/edit.html -%%DATADIR%%/doc/editmenu.html -%%DATADIR%%/doc/erasetool.png -%%DATADIR%%/doc/filemenu.html -%%DATADIR%%/doc/fileopen.png -%%DATADIR%%/doc/fileprint.png -%%DATADIR%%/doc/files.html -%%DATADIR%%/doc/filesave.png -%%DATADIR%%/doc/font_pulldown.png -%%DATADIR%%/doc/formatmenu.html -%%DATADIR%%/doc/functions.html -%%DATADIR%%/doc/groupmenu.html -%%DATADIR%%/doc/helpmenu.html -%%DATADIR%%/doc/index.html -%%DATADIR%%/doc/italictool.png -%%DATADIR%%/doc/linetool.png -%%DATADIR%%/doc/molinfo.html -%%DATADIR%%/doc/pastetool.png -%%DATADIR%%/doc/ringtool.png -%%DATADIR%%/doc/ringtoolbar.png -%%DATADIR%%/doc/selecttool.png -%%DATADIR%%/doc/spectra.html -%%DATADIR%%/doc/subscript.png -%%DATADIR%%/doc/superscript.png -%%DATADIR%%/doc/symboltool.png -%%DATADIR%%/doc/text.html -%%DATADIR%%/doc/texttool.png -%%DATADIR%%/doc/thick_pulldown.png -%%DATADIR%%/doc/toolbar.html -%%DATADIR%%/doc/toolmenu.html -%%DATADIR%%/doc/underlinetool.png -%%DATADIR%%/doc/uptool.png -%%DATADIR%%/edans.cml -%%DATADIR%%/fmoc.cml -%%DATADIR%%/forward.xpm -%%DATADIR%%/glutamic_acid.cml -%%DATADIR%%/glutamine.cml -%%DATADIR%%/glycine.cml -%%DATADIR%%/guanine.cml -%%DATADIR%%/histidine.cml -%%DATADIR%%/home.xpm -%%DATADIR%%/imidazole.cml -%%DATADIR%%/imidazole.png -%%DATADIR%%/indole.cml -%%DATADIR%%/isoleucine.cml -%%DATADIR%%/leucine.cml -%%DATADIR%%/lysine.cml -%%DATADIR%%/methionine.cml -%%DATADIR%%/naphthalene.cml -%%DATADIR%%/nitrophenylalanine.cml -%%DATADIR%%/phenylalanine.cml -%%DATADIR%%/proline.cml -%%DATADIR%%/purine.cml -%%DATADIR%%/pyrimidine.cml -%%DATADIR%%/retro.txt -%%DATADIR%%/ribose.cml -%%DATADIR%%/serine.cml -%%DATADIR%%/statine.cml -%%DATADIR%%/steroid.cml -%%DATADIR%%/threonine.cml -%%DATADIR%%/thymine.cml -%%DATADIR%%/tryptophan.cml -%%DATADIR%%/tyrosine.cml -%%DATADIR%%/uracil.cml -%%DATADIR%%/valine.cml -%%DATADIR%%/xdrawchem-icon.png -%%DATADIR%%/xdrawchem_da.qm -%%DATADIR%%/xdrawchem_de.qm -%%DATADIR%%/xdrawchem_en.qm -%%DATADIR%%/xdrawchem_es.qm -%%DATADIR%%/xdrawchem_fr.qm -%%DATADIR%%/xdrawchem_it.qm -%%DATADIR%%/xdrawchem_nl.qm -%%DATADIR%%/xdrawchem_pl.qm -%%DATADIR%%/xdrawchem_ru.qm -%%DATADIR%%/xdrawchemrc -@dirrm %%DATADIR%%/doc -@dirrm %%DATADIR%% |