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author | des <des@FreeBSD.org> | 2018-10-06 21:06:42 +0800 |
---|---|---|
committer | des <des@FreeBSD.org> | 2018-10-06 21:06:42 +0800 |
commit | 091caf4661b26a5f70d9b8e0409821418f5afdbb (patch) | |
tree | 0721b637b4bcfc0a8ff2a945bdcb7e68f8993680 /biology | |
parent | eb79e9b6a267227492e837fea536cf5c224c7a2d (diff) | |
download | freebsd-ports-gnome-091caf4661b26a5f70d9b8e0409821418f5afdbb.tar.gz freebsd-ports-gnome-091caf4661b26a5f70d9b8e0409821418f5afdbb.tar.zst freebsd-ports-gnome-091caf4661b26a5f70d9b8e0409821418f5afdbb.zip |
Fix every instance of RUN_DEPENDS:=${BUILD_DEPENDS} in p5 ports, except
for where it resulted in a change in output from build-depends-list or
run-depends-list.
Approved by: portmgr (adamw)
Diffstat (limited to 'biology')
-rw-r--r-- | biology/p5-AcePerl/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-ASN1-EntrezGene/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-Coordinate/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-Das-Lite/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-Das/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-FeatureIO/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-GFF3/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-Glite/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-Graphics/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-MAGETAB/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-NEXUS/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-Phylo/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-Bio-SCF/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-BioPerl-Run/Makefile | 4 | ||||
-rw-r--r-- | biology/p5-BioPerl/Makefile | 4 |
15 files changed, 30 insertions, 30 deletions
diff --git a/biology/p5-AcePerl/Makefile b/biology/p5-AcePerl/Makefile index 5e573cd41fe4..f392a0786013 100644 --- a/biology/p5-AcePerl/Makefile +++ b/biology/p5-AcePerl/Makefile @@ -14,8 +14,8 @@ COMMENT= Perl5 interface to the ACEDB genome database system LICENSE= ART10 GPLv1+ LICENSE_COMB= dual -BUILD_DEPENDS= p5-Cache-Cache>=0:devel/p5-Cache-Cache -RUN_DEPENDS:= ${BUILD_DEPENDS} +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Cache-Cache>=0:devel/p5-Cache-Cache MAKE_JOBS_UNSAFE= yes USES= perl5 diff --git a/biology/p5-Bio-ASN1-EntrezGene/Makefile b/biology/p5-Bio-ASN1-EntrezGene/Makefile index 035f3aef8c3a..8b2c9e6e9b2a 100644 --- a/biology/p5-Bio-ASN1-EntrezGene/Makefile +++ b/biology/p5-Bio-ASN1-EntrezGene/Makefile @@ -16,8 +16,8 @@ LICENSE= ART10 GPLv1+ LICENSE_COMB= dual LICENSE_FILE= ${WRKSRC}/LICENSE -BUILD_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl -RUN_DEPENDS:= ${BUILD_DEPENDS} +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl NO_ARCH= yes USES= perl5 diff --git a/biology/p5-Bio-Coordinate/Makefile b/biology/p5-Bio-Coordinate/Makefile index 2fec0c96e03b..f8ef5d839cde 100644 --- a/biology/p5-Bio-Coordinate/Makefile +++ b/biology/p5-Bio-Coordinate/Makefile @@ -14,8 +14,8 @@ LICENSE= ART10 GPLv1+ LICENSE_COMB= dual LICENSE_FILE= ${WRKSRC}/LICENSE -BUILD_DEPENDS= p5-BioPerl>=1.007000:biology/p5-BioPerl -RUN_DEPENDS:= ${BUILD_DEPENDS} +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-BioPerl>=1.007000:biology/p5-BioPerl NO_ARCH= yes USE_PERL5= configure diff --git a/biology/p5-Bio-Das-Lite/Makefile b/biology/p5-Bio-Das-Lite/Makefile index 7472b6eb4d80..330ff878a6f8 100644 --- a/biology/p5-Bio-Das-Lite/Makefile +++ b/biology/p5-Bio-Das-Lite/Makefile @@ -14,10 +14,10 @@ COMMENT= Perl extension for the DAS (HTTP+XML) Protocol LICENSE= ART10 GPLv1+ LICENSE_COMB= dual -BUILD_DEPENDS= p5-Readonly>=1.03:devel/p5-Readonly \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Readonly>=1.03:devel/p5-Readonly \ p5-libwww>=0:www/p5-libwww \ p5-WWW-Curl>=4.07:www/p5-WWW-Curl -RUN_DEPENDS:= ${BUILD_DEPENDS} USES= perl5 USE_PERL5= modbuild diff --git a/biology/p5-Bio-Das/Makefile b/biology/p5-Bio-Das/Makefile index 41a930813f55..b8ef669e867e 100644 --- a/biology/p5-Bio-Das/Makefile +++ b/biology/p5-Bio-Das/Makefile @@ -14,10 +14,10 @@ COMMENT= Client-side library for Distributed Genome Annotation System LICENSE= ART10 GPLv1+ LICENSE_COMB= dual -BUILD_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl \ p5-HTML-Parser>=3:www/p5-HTML-Parser \ p5-libwww>=5:www/p5-libwww -RUN_DEPENDS:= ${BUILD_DEPENDS} NO_ARCH= yes USES= perl5 diff --git a/biology/p5-Bio-FeatureIO/Makefile b/biology/p5-Bio-FeatureIO/Makefile index 2f85c893b768..809eddb61c99 100644 --- a/biology/p5-Bio-FeatureIO/Makefile +++ b/biology/p5-Bio-FeatureIO/Makefile @@ -14,12 +14,12 @@ LICENSE= ART10 GPLv1+ LICENSE_COMB= dual LICENSE_FILE= ${WRKSRC}/LICENSE -BUILD_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-BioPerl>=0:biology/p5-BioPerl \ p5-Tree-DAG_Node>=0:devel/p5-Tree-DAG_Node \ p5-URI>=0:net/p5-URI \ p5-XML-DOM>=0:textproc/p5-XML-DOM \ p5-XML-DOM-XPath>=0:textproc/p5-XML-DOM-XPath -RUN_DEPENDS:= ${BUILD_DEPENDS} NO_ARCH= yes USE_PERL5= configure diff --git a/biology/p5-Bio-GFF3/Makefile b/biology/p5-Bio-GFF3/Makefile index 955c5700fb8c..25fe0509e0e8 100644 --- a/biology/p5-Bio-GFF3/Makefile +++ b/biology/p5-Bio-GFF3/Makefile @@ -14,10 +14,10 @@ COMMENT= Fast low-level functions for parsing and formatting GFF3 LICENSE= ART10 GPLv1+ LICENSE_COMB= dual -BUILD_DEPENDS= p5-File-ReadBackwards>=0:devel/p5-File-ReadBackwards \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-File-ReadBackwards>=0:devel/p5-File-ReadBackwards \ p5-List-MoreUtils>=0:lang/p5-List-MoreUtils \ p5-URI>=0:net/p5-URI -RUN_DEPENDS:= ${BUILD_DEPENDS} TEST_DEPENDS= p5-IO-String>=0:devel/p5-IO-String USES= perl5 diff --git a/biology/p5-Bio-Glite/Makefile b/biology/p5-Bio-Glite/Makefile index ed0668d44584..58be4ad54db5 100644 --- a/biology/p5-Bio-Glite/Makefile +++ b/biology/p5-Bio-Glite/Makefile @@ -11,8 +11,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Perl Interface to G-language -BUILD_DEPENDS= p5-libwww>=5:www/p5-libwww -RUN_DEPENDS:= ${BUILD_DEPENDS} +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-libwww>=5:www/p5-libwww USES= perl5 USE_PERL5= configure diff --git a/biology/p5-Bio-Graphics/Makefile b/biology/p5-Bio-Graphics/Makefile index f16627233186..9fc0800d336e 100644 --- a/biology/p5-Bio-Graphics/Makefile +++ b/biology/p5-Bio-Graphics/Makefile @@ -14,14 +14,14 @@ COMMENT= Generate GD Images of Bio::Seq Objects LICENSE= ART10 GPLv1+ LICENSE_COMB= dual -BUILD_DEPENDS= p5-Bio-Coordinate>=1.007000:biology/p5-Bio-Coordinate \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Bio-Coordinate>=1.007000:biology/p5-Bio-Coordinate \ p5-Bio-SCF>=1.01:biology/p5-Bio-SCF \ p5-BioPerl>=1.007000:biology/p5-BioPerl \ p5-CGI>=0:www/p5-CGI \ p5-GD>=2.30:graphics/p5-GD \ p5-GD-SVG>=0.32:graphics/p5-GD-SVG \ p5-Statistics-Descriptive>=2.6:math/p5-Statistics-Descriptive -RUN_DEPENDS:= ${BUILD_DEPENDS} NO_ARCH= yes USES= perl5 diff --git a/biology/p5-Bio-MAGETAB/Makefile b/biology/p5-Bio-MAGETAB/Makefile index ce4faf061c89..c8b95d8236ad 100644 --- a/biology/p5-Bio-MAGETAB/Makefile +++ b/biology/p5-Bio-MAGETAB/Makefile @@ -13,7 +13,8 @@ COMMENT= Data model and utility API for the MAGE-TAB format LICENSE= GPLv2 -BUILD_DEPENDS= p5-Date-Manip>=5.44:devel/p5-Date-Manip \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Date-Manip>=5.44:devel/p5-Date-Manip \ p5-DateTime>=0.43.02:devel/p5-DateTime \ p5-DateTime-Format-DateManip>=0.04:devel/p5-DateTime-Format-DateManip \ p5-Email-Valid>=0.179:mail/p5-Email-Valid \ @@ -24,7 +25,6 @@ BUILD_DEPENDS= p5-Date-Manip>=5.44:devel/p5-Date-Manip \ p5-Parse-RecDescent>=1.965.001:devel/p5-Parse-RecDescent \ p5-Text-CSV_XS>=0.32:textproc/p5-Text-CSV_XS \ p5-URI>=1.35:net/p5-URI -RUN_DEPENDS:= ${BUILD_DEPENDS} TEST_DEPENDS= p5-Test-Exception>=0.26:devel/p5-Test-Exception USES= perl5 diff --git a/biology/p5-Bio-NEXUS/Makefile b/biology/p5-Bio-NEXUS/Makefile index bba1732dbd31..2559e08c1512 100644 --- a/biology/p5-Bio-NEXUS/Makefile +++ b/biology/p5-Bio-NEXUS/Makefile @@ -11,8 +11,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= perl@FreeBSD.org COMMENT= Object-oriented Perl API for the NEXUS file format -BUILD_DEPENDS= p5-Clone-PP>=1.02:devel/p5-Clone-PP -RUN_DEPENDS:= ${BUILD_DEPENDS} +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Clone-PP>=1.02:devel/p5-Clone-PP TEST_DEPENDS= p5-Test-Deep>=0.106:devel/p5-Test-Deep \ p5-Test-Pod>=0:devel/p5-Test-Pod \ diff --git a/biology/p5-Bio-Phylo/Makefile b/biology/p5-Bio-Phylo/Makefile index cf6f40d3e1bb..68512e73a70e 100644 --- a/biology/p5-Bio-Phylo/Makefile +++ b/biology/p5-Bio-Phylo/Makefile @@ -15,7 +15,8 @@ LICENSE= ART10 GPLv1+ LICENSE_COMB= dual LICENSE_FILE_ART10= ${WRKSRC}/COPYING -BUILD_DEPENDS= p5-Archive-Zip>=0:archivers/p5-Archive-Zip \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Archive-Zip>=0:archivers/p5-Archive-Zip \ p5-BioPerl>=0:biology/p5-BioPerl \ p5-GD>=0:graphics/p5-GD \ p5-Math-CDF>=0:math/p5-Math-CDF \ @@ -29,7 +30,6 @@ BUILD_DEPENDS= p5-Archive-Zip>=0:archivers/p5-Archive-Zip \ p5-XML-Twig>=0:textproc/p5-XML-Twig \ p5-XML-XML2JSON>=0:textproc/p5-XML-XML2JSON \ p5-libxml>=0:textproc/p5-libxml -RUN_DEPENDS:= ${BUILD_DEPENDS} TEST_DEPENDS= p5-JSON>=0:converters/p5-JSON NO_ARCH= yes diff --git a/biology/p5-Bio-SCF/Makefile b/biology/p5-Bio-SCF/Makefile index 7582862189d3..0013bfe5b43b 100644 --- a/biology/p5-Bio-SCF/Makefile +++ b/biology/p5-Bio-SCF/Makefile @@ -11,8 +11,8 @@ PKGNAMEPREFIX= p5- MAINTAINER= wen@FreeBSD.org COMMENT= Read and Update SCF Chromatographic Sequence Files -BUILD_DEPENDS= ${LOCALBASE}/include/io_lib/scf.h:biology/iolib -RUN_DEPENDS:= ${BUILD_DEPENDS} +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= ${LOCALBASE}/include/io_lib/scf.h:biology/iolib CFLAGS+= -I${LOCALBASE}/include LDFLAGS+= -L${LOCALBASE}/lib diff --git a/biology/p5-BioPerl-Run/Makefile b/biology/p5-BioPerl-Run/Makefile index 27a06f98bcb8..7c344b617cf9 100644 --- a/biology/p5-BioPerl-Run/Makefile +++ b/biology/p5-BioPerl-Run/Makefile @@ -15,7 +15,8 @@ LICENSE= ART10 GPLv1+ LICENSE_COMB= dual LICENSE_FILE_ART10= ${WRKSRC}/LICENSE -BUILD_DEPENDS= p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \ p5-Bio-FeatureIO>=0:biology/p5-Bio-FeatureIO \ p5-BioPerl>=1.007000:biology/p5-BioPerl \ p5-Config-Any>=0:devel/p5-Config-Any \ @@ -23,7 +24,6 @@ BUILD_DEPENDS= p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \ p5-IO-String>=0:devel/p5-IO-String \ p5-IPC-Run>=0:devel/p5-IPC-Run \ p5-XML-Twig>=0:textproc/p5-XML-Twig -RUN_DEPENDS:= ${BUILD_DEPENDS} CONFLICTS= p5-bioperl-run-1.[13579]* diff --git a/biology/p5-BioPerl/Makefile b/biology/p5-BioPerl/Makefile index 55105152f73f..a6b2bbbbe69a 100644 --- a/biology/p5-BioPerl/Makefile +++ b/biology/p5-BioPerl/Makefile @@ -14,7 +14,8 @@ COMMENT= Collection of Perl modules for bioinformatics LICENSE= ART10 GPLv1+ LICENSE_COMB= dual -BUILD_DEPENDS= p5-Algorithm-Munkres>=0:math/p5-Algorithm-Munkres \ +BUILD_DEPENDS= ${RUN_DEPENDS} +RUN_DEPENDS= p5-Algorithm-Munkres>=0:math/p5-Algorithm-Munkres \ p5-Array-Compare>=0:misc/p5-Array-Compare \ p5-CGI>=0:www/p5-CGI \ p5-Clone>=0:devel/p5-Clone \ @@ -51,7 +52,6 @@ BUILD_DEPENDS= p5-Algorithm-Munkres>=0:math/p5-Algorithm-Munkres \ p5-YAML>=0:textproc/p5-YAML \ p5-libwww>=0:www/p5-libwww \ p5-libxml>=0:textproc/p5-libxml -RUN_DEPENDS:= ${BUILD_DEPENDS} TEST_DEPENDS= p5-Test-Most>=0:devel/p5-Test-Most \ p5-URI>=0:net/p5-URI |