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authoramdmi3 <amdmi3@FreeBSD.org>2016-05-17 00:10:36 +0800
committeramdmi3 <amdmi3@FreeBSD.org>2016-05-17 00:10:36 +0800
commit25b7d831c69dfba64a18c57d39bb5632fd209859 (patch)
treea44a524c40905a2e3c4f0c02e1db9cbd38f54dc6 /biology
parente95f5244bce3090bd42524910a2638c86456a0ae (diff)
downloadfreebsd-ports-gnome-25b7d831c69dfba64a18c57d39bb5632fd209859.tar.gz
freebsd-ports-gnome-25b7d831c69dfba64a18c57d39bb5632fd209859.tar.zst
freebsd-ports-gnome-25b7d831c69dfba64a18c57d39bb5632fd209859.zip
- Update to 4.9a
- While here, simplify WRKSRC and use options helpers PR: 209535 Submitted by: jrm@ftfl.ca (maintainer)
Diffstat (limited to 'biology')
-rw-r--r--biology/paml/Makefile6
-rw-r--r--biology/paml/distinfo5
2 files changed, 7 insertions, 4 deletions
diff --git a/biology/paml/Makefile b/biology/paml/Makefile
index 03a7616be267..c4b3181ba84d 100644
--- a/biology/paml/Makefile
+++ b/biology/paml/Makefile
@@ -2,7 +2,7 @@
# $FreeBSD$
PORTNAME= paml
-PORTVERSION= 4.8a
+PORTVERSION= 4.9a
CATEGORIES= biology
MASTER_SITES= http://abacus.gene.ucl.ac.uk/software/
DISTNAME= ${PORTNAME}${PORTVERSION}
@@ -11,7 +11,7 @@ MAINTAINER= jrm@ftfl.ca
COMMENT= Phylogenetic Analysis by Maximum Likelihood (PAML)
USES= gmake tar:tgz
-WRKSRC= ${WRKDIR}/${PORTNAME}4.8/src
+WRKSRC= ${WRKDIR}/${DISTNAME}/src
MAKE_ARGS= CC="${CC}" CFLAGS="${CFLAGS}"
BINARIES= baseml basemlg chi2 codeml evolver pamp yn00
@@ -23,6 +23,8 @@ do-install:
.for f in ${BINARIES}
${INSTALL_PROGRAM} ${WRKSRC}/${f} ${STAGEDIR}${PREFIX}/bin
.endfor
+
+do-install-DOCS-on:
@${MKDIR} ${STAGEDIR}${DOCSDIR}
.for f in ${DOC_FILES}
${INSTALL_DATA} ${WRKSRC}/../doc/${f} ${STAGEDIR}${DOCSDIR}
diff --git a/biology/paml/distinfo b/biology/paml/distinfo
index da4a5bbf3895..00a59125bc88 100644
--- a/biology/paml/distinfo
+++ b/biology/paml/distinfo
@@ -1,2 +1,3 @@
-SHA256 (paml4.8a.tgz) = e45f37e1cfc1c24de276266a7bc2926fc12eac9602c56c1c025bc8f6dfb737f3
-SIZE (paml4.8a.tgz) = 5879158
+TIMESTAMP = 1463365805
+SHA256 (paml4.9a.tgz) = 1400b6a48aa7ba2dee637352430a1f64594674168cf7a749ac79093da9a39ef4
+SIZE (paml4.9a.tgz) = 5853303