diff options
| author | sunpoet <sunpoet@FreeBSD.org> | 2016-12-18 23:25:44 +0800 |
|---|---|---|
| committer | sunpoet <sunpoet@FreeBSD.org> | 2016-12-18 23:25:44 +0800 |
| commit | 2d54fbbc08a70686d3d3c1234bc14a58a7d97c01 (patch) | |
| tree | cd5363a6628e4e356b80c505655a58f3361078f0 /biology | |
| parent | 964b9cb91678f491c9c816518937756a75432ac6 (diff) | |
| download | freebsd-ports-gnome-2d54fbbc08a70686d3d3c1234bc14a58a7d97c01.tar.gz freebsd-ports-gnome-2d54fbbc08a70686d3d3c1234bc14a58a7d97c01.tar.zst freebsd-ports-gnome-2d54fbbc08a70686d3d3c1234bc14a58a7d97c01.zip | |
- Move biology/p5-bioperl-run to biology/p5-BioPerl-Run
- Sort *_DEPENDS
- Add NO_ARCH
- Bump PORTREVISION for biology/p5-bioperl renaming
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/Makefile | 2 | ||||
| -rw-r--r-- | biology/p5-BioPerl-Run/Makefile (renamed from biology/p5-bioperl-run/Makefile) | 16 | ||||
| -rw-r--r-- | biology/p5-BioPerl-Run/distinfo (renamed from biology/p5-bioperl-run/distinfo) | 0 | ||||
| -rw-r--r-- | biology/p5-BioPerl-Run/files/patch-Build.PL (renamed from biology/p5-bioperl-run/files/patch-Build.PL) | 0 | ||||
| -rw-r--r-- | biology/p5-BioPerl-Run/pkg-descr (renamed from biology/p5-bioperl-run/pkg-descr) | 0 | ||||
| -rw-r--r-- | biology/p5-BioPerl-Run/pkg-plist (renamed from biology/p5-bioperl-run/pkg-plist) | 0 |
6 files changed, 10 insertions, 8 deletions
diff --git a/biology/Makefile b/biology/Makefile index d24068a96660..7f4804d2445d 100644 --- a/biology/Makefile +++ b/biology/Makefile @@ -68,7 +68,7 @@ SUBDIR += p5-Bio-Phylo SUBDIR += p5-Bio-SCF SUBDIR += p5-BioPerl - SUBDIR += p5-bioperl-run + SUBDIR += p5-BioPerl-Run SUBDIR += p5-transdecoder SUBDIR += paml SUBDIR += phrap diff --git a/biology/p5-bioperl-run/Makefile b/biology/p5-BioPerl-Run/Makefile index 134d8e50d0d1..881c35fd26d5 100644 --- a/biology/p5-bioperl-run/Makefile +++ b/biology/p5-BioPerl-Run/Makefile @@ -1,9 +1,9 @@ # Created by: Mauricio Herrera Cuadra <mauricio@arareko.net> # $FreeBSD$ -PORTNAME= bioperl-run +PORTNAME= BioPerl-Run PORTVERSION= 1.6.901 -PORTREVISION= 1 +PORTREVISION= 2 CATEGORIES= biology perl5 PKGNAMEPREFIX= p5- @@ -13,20 +13,22 @@ COMMENT= Wrapper modules for common bioinformatics tools LICENSE= ART10 GPLv3 LICENSE_COMB= dual -BUILD_DEPENDS= p5-bioperl>=1.6.0:biology/p5-bioperl \ - p5-IPC-Run>=0:devel/p5-IPC-Run \ - p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \ - p5-XML-Twig>=0:textproc/p5-XML-Twig \ +BUILD_DEPENDS= p5-Algorithm-Diff>=0:devel/p5-Algorithm-Diff \ + p5-BioPerl>=1.6.0:biology/p5-BioPerl \ + p5-Config-Any>=0:devel/p5-Config-Any \ p5-File-Sort>=0:misc/p5-File-Sort \ - p5-Config-Any>=0:devel/p5-Config-Any + p5-IPC-Run>=0:devel/p5-IPC-Run \ + p5-XML-Twig>=0:textproc/p5-XML-Twig RUN_DEPENDS:= ${BUILD_DEPENDS} CONFLICTS= p5-bioperl-run-1.[13579]* USE_GITHUB= yes GH_ACCOUNT= bioperl +GH_PROJECT= bioperl-run GH_TAGNAME= 96ccd93 +NO_ARCH= yes USES= perl5 shebangfix USE_PERL5= modbuild SHEBANG_FILES= scripts/* diff --git a/biology/p5-bioperl-run/distinfo b/biology/p5-BioPerl-Run/distinfo index 1005fa30a806..1005fa30a806 100644 --- a/biology/p5-bioperl-run/distinfo +++ b/biology/p5-BioPerl-Run/distinfo diff --git a/biology/p5-bioperl-run/files/patch-Build.PL b/biology/p5-BioPerl-Run/files/patch-Build.PL index 8af6e19b1a04..8af6e19b1a04 100644 --- a/biology/p5-bioperl-run/files/patch-Build.PL +++ b/biology/p5-BioPerl-Run/files/patch-Build.PL diff --git a/biology/p5-bioperl-run/pkg-descr b/biology/p5-BioPerl-Run/pkg-descr index 4139c169c6d3..4139c169c6d3 100644 --- a/biology/p5-bioperl-run/pkg-descr +++ b/biology/p5-BioPerl-Run/pkg-descr diff --git a/biology/p5-bioperl-run/pkg-plist b/biology/p5-BioPerl-Run/pkg-plist index 51b2742be490..51b2742be490 100644 --- a/biology/p5-bioperl-run/pkg-plist +++ b/biology/p5-BioPerl-Run/pkg-plist |