Remove expired ports:

2015-11-26 audio/pecl-id3: Broken for more than 6 months
2015-11-26 dns/geta: Broken for more than 6 months
2015-11-26 finance/openerp-web: Broken for more than 6 months
2015-11-26 devel/py-async: Further using of this module is not encouraged by upstream
2015-11-26 chinese/kon2: Depends on expiring chinese/cce
2015-11-26 games/linux-skulltag: Depends on expiring audio/linux-fmodapi
2015-11-26 archivers/wzip: Broken for more than 6 months
2015-11-26 databases/sybtcl: Broken for more than 6 months
2015-11-26 biology/povchem: Broken for more than 6 months
2015-11-26 audio/btc: Broken for more than 6 months
2015-11-26 astro/wmglobe: Broken for more than 6 months
2015-11-26 graphics/pyro: Broken for more than 6 months
2015-11-26 graphics/jpeg2ps: Broken for more than 6 months
2015-11-26 chinese/gugod-clean: Broken for more than 6 months
2015-11-26 comms/bforce: Broken for more than 6 months
2015-11-26 cad/geda-docs: Broken for more than 6 months
2015-11-26 chinese/cwtexttf: Broken for more than 6 months
2015-11-26 comms/zmtx-zmrx: Broken for more than 6 months
2015-11-26 astro/sky2000: Broken for more than 6 months
2015-11-26 deskutils/libopensync-plugin-file: Broken for more than 6 months
2015-11-26 databases/sqlite-ext-mobigroup: Broken for more than 6 months
2015-11-26 chinese/bg5ps: Broken for more than 6 months
2015-11-26 deskutils/x-tile: Broken for more than 6 months
2015-11-26 graphics/pure-gl: Broken for more than 6 months
2015-11-26 audio/dvda-author: Broken for more than 6 months
2015-11-26 chinese/oxim: Broken for more than 6 months
2015-11-26 editors/spe: Broken for more than 6 months
2015-11-26 audio/mpdscribble: Broken for more than 6 months
2015-11-26 cad/geda-symcheck: Broken for more than 6 months
2015-11-26 audio/linux-fmodapi: Broken for more than 6 months
2015-11-26 audio/pure-audio: Broken for more than 6 months
2015-11-26 editors/bpatch: Broken for more than 6 months
2015-11-26 benchmarks/geekbench: Broken for more than 6 months
2015-11-26 graphics/icoconvert: Broken for more than 6 months
2015-11-26 cad/geda-utils: Broken for more than 6 months
2015-11-26 deskutils/tomboy-plugin-wordcount: Broken for more than 6 months
2015-11-26 graphics/sketch: Broken for more than 6 months
2015-11-26 ftp/spegla: Broken for more than 6 months
2015-11-26 graphics/clutter-box2d: Broken for more than 6 months
2015-11-26 audio/scmpc: Broken for more than 6 months
2015-11-26 ftp/gnusget: Broken for more than 6 months
2015-11-26 comms/gpsk31: Broken for more than 6 months
2015-11-26 cad/geda-gschem: Broken for more than 6 months
2015-11-26 audio/ampache: Broken for more than 6 months
2015-11-26 cad/slffea: Broken for more than 6 months
2015-11-26 audio/cripple: Broken for more than 6 months
2015-11-26 cad/geda-gattrib: Broken for more than 6 months
2015-11-26 cad/findhier: Broken for more than 6 months
2015-11-26 biology/njplot: Broken for more than 6 months
2015-11-26 audio/wmmp: Broken for more than 6 months
2015-11-26 x11/avant-window-navigator: Broken for more than 6 months
2015-11-26 cad/geda-netlist: Broken for more than 6 months
2015-11-26 deskutils/libopensync-plugin-sunbird: Broken for more than 6 months
2015-11-26 biology/ortep3: Broken for more than 6 months
2015-11-26 astro/aa: Broken for more than 6 months
2015-11-26 french/belote: Broken for more than 6 months
2015-11-26 converters/p5-String-SetUTF8: Broken for more than 6 months
2015-11-26 cad/geda-examples: Broken for more than 6 months
2015-11-26 editors/yasnippet: Broken for more than 6 months
2015-11-26 audio/musica: Broken for more than 6 months
2015-11-26 graphics/rubyphoto: Broken for more than 6 months
2015-11-26 german/bsdpaste: Broken for more than 6 months
2015-11-26 audio/amrcoder: Broken for more than 6 months
2015-11-26 sysutils/bashburn: Broken for more than 6 months
2015-11-26 editors/e93: Broken for more than 6 months
2015-11-26 audio/tepsonic: Broken for more than 6 months
2015-11-26 astro/ephem: Broken for more than 6 months
2015-11-26 chinese/cce: Broken for more than 6 months
2015-11-26 graphics/qcread: Broken for more than 6 months
2015-11-26 databases/py-sqlkit: Broken for more than 6 months
2015-11-26 databases/usogres: Broken for more than 6 months
2015-11-26 cad/libgeda: Broken for more than 6 months
2015-11-26 chinese/p5-Lingua-ZH-BPMFConvert: Broken for more than 6 months
2015-11-26 french/alphabet_sounds_fr: Broken for more than 6 months
2015-11-26 deskutils/mrundlg: Broken for more than 6 months
2015-11-26 databases/erlang-mysql: Broken for more than 6 months
2015-11-26 graphics/linux-XnViewMP: Broken for more than 6 months
2015-11-26 deskutils/akamaru: Broken for more than 6 months
2015-11-26 dns/p5-Net-DNS-ZoneCheck: Broken for more than 6 months
2015-11-26 astro/dgpsip: Broken for more than 6 months
2015-11-26 databases/pecl-handlersocket: Broken for more than 6 months
2015-11-26 audio/cymbaline: Broken for more than 6 months
2015-11-26 french/dico: Broken for more than 6 months
2015-11-26 comms/qpage: Broken for more than 6 months
2015-11-26 audio/sonice: Broken for more than 6 months
2015-11-26 cad/geda-symbols: Broken for more than 6 months
2015-11-26 databases/java-mybatis: Broken for more than 6 months
2015-11-26 databases/openbase-jdbc: Broken for more than 6 months
2015-11-27 www/mediawiki119: Please upgrade to mediawiki-1.25
2015-11-28 www/R-cran-Rpad: Unmaintained upstream

15 files changed, 0 insertions, 933 deletions

diff --git a/biology/Makefile b/biology/Makefile
index 8ded92f1a10c..9630fba8eda8 100644
--- a/biology/Makefile
+++ b/biology/Makefile
@@ -50,8 +50,6 @@
     SUBDIR += muscle
     SUBDIR += ncbi-blast+
     SUBDIR += ncbi-toolkit
-    SUBDIR += njplot
-    SUBDIR += ortep3
     SUBDIR += p5-AcePerl
     SUBDIR += p5-Bio-ASN1-EntrezGene
     SUBDIR += p5-Bio-Das
@@ -73,7 +71,6 @@
     SUBDIR += platon
     SUBDIR += plink
     SUBDIR += plinkseq
-    SUBDIR += povchem
     SUBDIR += primer3
     SUBDIR += protomol
     SUBDIR += psi88
diff --git a/biology/njplot/Makefile b/biology/njplot/Makefile
deleted file mode 100644
index 30030370cea0..000000000000
--- a/biology/njplot/Makefile
+++ /dev/null
@@ -1,55 +0,0 @@
-# Created by: Motomichi Matsuzaki <mzaki@biol.s.u-tokyo.ac.jp>
-# $FreeBSD$
-
-PORTNAME=	njplot
-PORTVERSION=	2.1
-PORTREVISION=	3
-CATEGORIES=	biology
-MASTER_SITES=	ftp://pbil.univ-lyon1.fr/pub/mol_phylogeny/njplot/archive/
-
-MAINTAINER=	mzaki@m.u-tokyo.ac.jp
-COMMENT=	Phylogenetic tree drawing program capable of interactive manipulation
-
-BROKEN=		Unfetchable
-DEPRECATED=	Broken for more than 6 months
-EXPIRATION_DATE=	2015-11-26
-
-OPTIONS_DEFINE=		DOCS X11
-OPTIONS_DEFAULT=	DOCS X11
-
-.include <bsd.port.options.mk>
-
-.if ${PORT_OPTIONS:MX11}
-BUILD_DEPENDS=	${LOCALBASE}/lib/ncbi/libvibrant.a:${PORTSDIR}/biology/ncbi-toolkit
-USE_XORG=	x11 xt xmu xp
-USES=		motif
-.endif
-
-MAKEFILE=	makefile
-
-BINARIES=	newicktops newicktotxt
-.if ${PORT_OPTIONS:MX11}
-BINARIES+=	njplot unrooted
-.endif
-.for file in ${BINARIES}
-PLIST_FILES+=	bin/${file}
-.endfor
-
-PORTDOCS=	njplot.help njplot.html njplot.gif
-
-MAN_1=		njplot.1 unrooted.1
-PLIST_FILES+=	man/man1/njplot.1.gz \
-		man/man1/unrooted.1.gz
-
-.if !${PORT_OPTIONS:MX11}
-post-patch:
-	${REINPLACE_CMD} -e 's|njplot.*unrooted||' ${WRKSRC}/makefile
-.endif
-
-do-install:
-	${INSTALL_PROGRAM} ${BINARIES:S|^|${WRKSRC}/|} ${STAGEDIR}${PREFIX}/bin
-	${INSTALL_MAN} ${MAN_1:S|^|${WRKSRC}/|} ${STAGEDIR}${PREFIX}/man/man1
-	${MKDIR} ${STAGEDIR}${DOCSDIR}
-	${INSTALL_MAN} ${PORTDOCS:S|^|${WRKSRC}/|} ${STAGEDIR}${DOCSDIR}
-
-.include <bsd.port.mk>
diff --git a/biology/njplot/distinfo b/biology/njplot/distinfo
deleted file mode 100644
index 7e5cae22a4e2..000000000000
--- a/biology/njplot/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (njplot-2.1.tar.gz) = dd8a54c3903cd104d8322257a87b5fbf3afb7776a96fcf9bee504ae1ad54c0c1
-SIZE (njplot-2.1.tar.gz) = 85735
diff --git a/biology/njplot/files/patch-makefile b/biology/njplot/files/patch-makefile
deleted file mode 100644
index 2f913dea012a..000000000000
--- a/biology/njplot/files/patch-makefile
+++ /dev/null
@@ -1,69 +0,0 @@
---- makefile.orig	Thu Oct 11 01:54:00 2007
-+++ makefile	Mon Dec  3 22:08:28 2007
-@@ -1,5 +1,5 @@
- #uncomment and locally adapt next line to fix the full helpfile path name
--HELPFILENAME = -DHELPFILENAME=\"/usr/share/njplot/njplot.help\"
-+HELPFILENAME = -DHELPFILENAME=\"$(LOCALBASE)/doc/njplot/njplot.help\"
- 
- #comment out next line and uncomment next 2 to use the PDFLib Lite library 
- NO_PDF = -DNO_PDF
-@@ -7,43 +7,45 @@
- #PDFLIB = -L$(PDF) -lpdf
- 
- # c compiler and linker
--CC = gcc
-+CC ?= gcc
- 
- # Vibrant top directory
--VIBRANT = /banques0/ncbiJun04
-+#VIBRANT = /banques0/ncbiJun04
-+NCBIINC = $(LOCALBASE)/include/ncbi
-+NCBILIB = $(LOCALBASE)/lib/ncbi
- 
- 
- # X11 include directory
--X11INCL = /usr/X11R6/include
-+X11INCL = $(LOCALBASE)/include
- 
- # motif library directory
--MOTIFLIB = /sw/lib
--MOTIFINCL = /sw/include
-+#MOTIFLIB = /sw/lib
-+#MOTIFINCL = /sw/include
- 
- OBJECTS = njplot-vib.o
- OBJUNROOTED = unrooted-vib.o preptree.o
- 
- 
--CFLAGS  = -c -DWIN_MOTIF -Dunix -I$(VIBRANT)/include -I$(VIBRANT)/vibrant -I$(VIBRANT)/corelib \
--	-I$(VIBRANT) -I$(PDF) -I$(X11INCL) -I$(MOTIFINCL) $(HELPFILENAME) $(NO_PDF) \
--	-Wimplicit-function-declaration -g
-+CFLAGS  = -c -DWIN_MOTIF -Dunix -I$(NCBIINC) \
-+	-I$(X11INCL) $(HELPFILENAME) $(NO_PDF) \
-+	-Wimplicit-function-declaration
- 	
- all: njplot  unrooted newicktops newicktotxt
- 
- 
- njplot : $(OBJECTS)
- 	$(CC) -g -o njplot $(OBJECTS) \
--        -L$(VIBRANT)/lib \
-+        -L$(NCBILIB) \
-         -lvibrant -lncbi \
-         $(PDFLIB)   \
--        -L$(MOTIFLIB) -lXm  \
--        -L/usr/X11R6/lib -lXmu -lXt -lX11 -lm
-+        $(MOTIFLIB) \
-+        -L$(LOCALBASE)/lib -lXmu -lXt -lX11 -lm
-         
- unrooted : $(OBJUNROOTED)
- 	$(CC) -g -o unrooted $(OBJUNROOTED) \
--        -L$(VIBRANT)/lib -lvibrant -lncbi \
--        -L$(MOTIFLIB) -lXm \
--        -L/usr/X11R6/lib -lXmu -lXt -lX11  -lm
-+        -L$(NCBILIB) -lvibrant -lncbi \
-+        $(MOTIFLIB) \
-+        -L$(LOCALBASE)/lib -lXmu -lXt -lX11  -lm
- 
- newicktops: njplot-vib.c
- 	$(CC) -DNO_GUI  -DNO_PDF -o $@ njplot-vib.c -lm
diff --git a/biology/njplot/pkg-descr b/biology/njplot/pkg-descr
deleted file mode 100644
index 679993f19121..000000000000
--- a/biology/njplot/pkg-descr
+++ /dev/null
@@ -1,17 +0,0 @@
-NJplot is a tree drawing program able to draw any phylogenetic tree expressed
-in the Newick phylogenetic tree format (e.g., the format used by the PHYLIP
-package). NJplot is especially convenient for rooting the unrooted trees
-obtained from parsimony, distance or maximum likelihood tree-building methods.
-
-The package contains the following programs:
-njplot      - draw phylogenetic trees and interactively modify them
-newicktops  - non-interactive version rendering into a PostScript file
-newicktotxt - non-interactive version rendering into a text file
-unrooted    - draw unrooted circular trees
-
-If you use NJplot in a published work, please cite the following reference:
-
-Perriere, G. and Gouy, M. (1996) WWW-Query: An on-line retrieval system for
-biological sequence banks. Biochimie, 78, 364-369.
-
-WWW: http://pbil.univ-lyon1.fr/software/njplot.html
diff --git a/biology/ortep3/Makefile b/biology/ortep3/Makefile
deleted file mode 100644
index 38e5ea213acf..000000000000
--- a/biology/ortep3/Makefile
+++ /dev/null
@@ -1,55 +0,0 @@
-# Created by: Ryo MIYAMOTO
-# $FreeBSD$
-
-PORTNAME=	ortep3
-PORTVERSION=	1.0.3
-PORTREVISION=	9
-CATEGORIES=	biology
-MASTER_SITES=	http://www.ccl.net/cca/software/SOURCES/FORTRAN/ortep/:Z \
-		ftp://ftp.ornl.gov/pub/ortep/src/:f
-DISTFILES=	ortep.tar.Z:Z ortep.f:f
-EXTRACT_ONLY=	ortep.tar.Z
-
-MAINTAINER=	ports@FreeBSD.org
-COMMENT=	Oak Ridge Thermal Ellipsoid Plot Program for Crystal Structure
-
-BROKEN=		Unfetchable
-DEPRECATED=	Broken for more than 6 months
-EXPIRATION_DATE=	2015-11-26
-
-PGPLOT_LIB_DEPENDS=	libpgplot.so:${PORTSDIR}/graphics/pgplot
-
-USES=		fortran
-WRKSRC=		${WRKDIR}/ortep/src
-MAKE_ARGS=	LFLAGS="${LDFLAGS}"
-
-PGPLOT_LDFLAGS=	-L${LOCALBASE}/lib -lpgplot -lX11
-
-PLIST_FILES+=	bin/ortep3
-PORTDOCS=	*
-PORTEXAMPLES=	*
-
-OPTIONS_DEFINE=	DOCS EXAMPLES PGPLOT
-PGPLOT_DESC=	Fortran subroutine package for drawing graphs
-
-PGPLOT_EXTRA_PATCHES=	${FILESDIR}/extra-patch-aa
-
-post-extract:
-	${MV} ${WRKSRC}/ortep.f ${WRKSRC}/ortep.f-1.0
-	${CP} ${DISTDIR}/ortep.f ${WRKSRC}/ortep.f
-
-pre-build:
-	${CP} ${FILESDIR}/Makefile.ortep3 ${WRKSRC}/Makefile
-
-do-install:
-	${INSTALL_PROGRAM} ${WRKSRC}/ortep3 ${STAGEDIR}${PREFIX}/bin
-do-install-DOCS-on:
-	${MKDIR} ${STAGEDIR}${DOCSDIR}/src
-	${INSTALL_DATA} ${WRKSRC}/../README.1st ${STAGEDIR}${DOCSDIR}
-	${INSTALL_DATA} ${WRKSRC}/../man/* ${STAGEDIR}${DOCSDIR}
-	${INSTALL_DATA} ${WRKSRC}/000readme.txt ${STAGEDIR}${DOCSDIR}/src
-do-install-EXAMPLES-on:
-	${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
-	${INSTALL_DATA} ${WRKSRC}/../examples/* ${STAGEDIR}${EXAMPLESDIR}
-
-.include <bsd.port.mk>
diff --git a/biology/ortep3/distinfo b/biology/ortep3/distinfo
deleted file mode 100644
index 02e1867208fa..000000000000
--- a/biology/ortep3/distinfo
+++ /dev/null
@@ -1,4 +0,0 @@
-SHA256 (ortep.tar.Z) = 7ad2b619e0291cb25c51fa99b6eb33d61a20def878518ee5e56b225d074a896e
-SIZE (ortep.tar.Z) = 3977473
-SHA256 (ortep.f) = 622cdd2801d3959c08f71514de865cc18511fd8522b0b229467d0387047fc374
-SIZE (ortep.f) = 177237
diff --git a/biology/ortep3/files/Makefile.ortep3 b/biology/ortep3/files/Makefile.ortep3
deleted file mode 100644
index bd8be39c4293..000000000000
--- a/biology/ortep3/files/Makefile.ortep3
+++ /dev/null
@@ -1,16 +0,0 @@
-# Makefile for the ORTEP-III
-
-TARGET= ortep3
-SRC= ortep.f
-OBJ= ortep.o
-FFLAGS= -O2
-LFLAGS=
-
-all: ${OBJ}
-	${FC} ${LFLAGS} -o ${TARGET} ${OBJ}
-
-ortep.o: ortep.f
-	${FC} ${FFLAGS} -c $<
-
-clean:
-	rm -f *.o ${TARGET}
diff --git a/biology/ortep3/files/extra-patch-aa b/biology/ortep3/files/extra-patch-aa
deleted file mode 100644
index 819571fc46b9..000000000000
--- a/biology/ortep3/files/extra-patch-aa
+++ /dev/null
@@ -1,424 +0,0 @@
-*** ortep.f	Tue Apr  2 01:34:17 1996
---- ortep.f.pgplot	Sat May  8 20:35:22 1999
-***************
-*** 5342,5366 ****
-  c *** DUMMY SCREEN OUTPUT (MAY BE REPLACED WITH SCREEN DRIVER CODE)
-  c *****************************************************************
-  
-!       subroutine initsc
-!       return
-!       end
-! 
-!       subroutine penwsc(penw)
-!       return
-!       end
-! 
-!       subroutine colrsc(icolor)
-!       return
-!       end
-! 
-!       subroutine pensc(x,y,ipen)
-!       return
-!       end
-! 
-!       subroutine endsc
-!       return
-!       end
-  
-  c *** end of dummy screen output
-  c ****************************************************************
---- 5342,5366 ----
-  c *** DUMMY SCREEN OUTPUT (MAY BE REPLACED WITH SCREEN DRIVER CODE)
-  c *****************************************************************
-  
-! c      subroutine initsc
-! c      return
-! c      end
-! 
-! c      subroutine penwsc(penw)
-! c      return
-! c      end
-! 
-! c      subroutine colrsc(icolor)
-! c      return
-! c      end
-! 
-! c      subroutine pensc(x,y,ipen)
-! c      return
-! c      end
-! 
-! c      subroutine endsc
-! c      return
-! c      end
-  
-  c *** end of dummy screen output
-  c ****************************************************************
-***************
-*** 5376,5558 ****
-  c     or via e-mail to tjp@astro.caltech.edu. 
-  c ****************************************************************
-  
-! c     subroutine initsc
-! c     character*10 outdev
-! c     common /ns/ npf,ndraw,norient,nvar
-! c     integer pgbeg
-  c     
-! c     xwid=11.
-! c     yhgt=8.5
-  c     
-  c *** The following is for PGPLOT on an X-windows system.
-! c     outdev = '/XWINDOW'
-  c *** The following is for PGPLOT on an MS-DOS system.
-  c     outdev = '/MS'
-  c *** The following is for PGPLOT on a Macintosh system.
-  c     outdev = '/MAC'
-  
-! c     open(npf,status='scratch')
-  
-! c     if (pgbeg(0,' ',1,1) .ne. 1) call exitng(8)
-  
-  c     switch black and white
-! c     call pgscr(0,1.,1.,1.)
-! c     call pgscr(1,0.,0.,0.)
-  
-  c     set up drawing window
-! c     call pgpage
-! c     call pgqch(osize)
-! c     call pgsch(0.)
-! c     call pgvstd
-! c     call pgwnad(0.,xwid,0.,yhgt)
-! c     call pgsch(osize)
-! c     call pgbox('BCT',1.,0,'BCT',1.,0)
-! c     call pgsci(1)
-! c     call pgsfs(2)
-! c     call pgrect(10.4,11.,8.2,8.5)
-! c     call pgtext(10.5,8.3,'EXIT')
-  
-! c     return
-! c     end
-  
-! c     subroutine colrsc(icolor)
-  c *** set plot color
-  c *** in ORTEP icolor=0 => black
-  c *** PGPLOT is set up for 1=black
-! c     common /ns/ npf,ndraw,norient,nvar
-! c     icol=icolor
-! c     if (icol.eq.0) icol=1
-! c     nvar=icol
-! c     if (ndraw.eq.1) call pgsci(icol)
-! c     if (ndraw.eq.9) write (npf,111) icol
-! c 111 format('COL',1x,i2)
-! c     return
-! c     end
-  
-! c     subroutine penwsc(penw)
-  c *** change pen width
-  c *** PGPLOT measures pen width in 200ths of an inch
-! c     common /ns/ npf,ndraw,norient,nvar
-! c     ipenw=nint(.001*penw*200.)
-! c     if (ipenw.le.0) ipenw=1
-! c     if (ipenw.gt.200) ipenw=200
-! c     if (ndraw.eq.1) call pgslw(ipenw)
-! c     if (ndraw.eq.9) write (npf,111) ipenw
-! c 111 format('WID',1x,i3)
-! c     return
-! c     end
-  
-! c     subroutine pensc(x,y,ipen)
-  c *** move the pen
-! c     common /trfac/ xtrans,ytrans
-! c     common /ns/ npf,ndraw,norient,nvar
-  
-! c     if (ipen.eq.2) then
-! c        if (ndraw.eq.1) call pgdraw(x+xtrans,y+ytrans)
-! c        if (ndraw.eq.9) write (npf,111) x+xtrans,y+ytrans
-! c 111    format('LIN',2(1x,f10.6))
-! c     end if
-! c     if (ipen.eq.3) then
-! c        if (ndraw.eq.1) call pgmove(x+xtrans,y+ytrans)
-! c        if (ndraw.eq.9) write (npf,112) x+xtrans,y+ytrans
-! c 112    format('MOV',2(1x,f10.6))
-! c     end if
-  
-! c     return
-! c     end
-  
-! c     subroutine endsc
-! c     common /ns/ npf,ndraw,norient,nvar
-  
-! c     call curssc
-! c     close(npf)
-  
-  c *** tell user to hit <enter> key
-! c     call pgsci(0)
-! c     call pgsfs(1)
-! c     call pgrect(7.5,11.,8.2,8.5)
-! c     call pgsci(1)
-! c     call pgsfs(2)
-! c     call pgrect(7.5,11.,8.2,8.5)
-! c     call pgsci(1)
-! c     call pgtext(7.6,8.3,'Hit <RETURN> or <ENTER> key')
-  
-! c     call pgend
-  
-! c     return
-! c     end
-  
-! c     subroutine curssc
-  c *** correlate screen cursor position with atom positions and display results
-! c     character ch
-! c     character*21 str
-! c     integer pgcurs
-! c     character*6 label,alabel
-! c     character*9 tomid,atomid
-! c     common /trfac/ xtrans,ytrans
-! c     common /ns/ npf,ndraw,norient,nvar
-! 
-! c     call pgsfs(1)
-! c     call pgscf(1)
-! c     call pgsch(1.)
-  
-  c *** get cursor position
-! c 1   junk = pgcurs(x,y,ch)
-  
-! c     if (ch.eq.'x' .or. ch.eq.'X') return
-! c     if (ch.eq.'d' .or. ch.eq.'D') return
-! c     if (x.ge.10.4 .and. x.le.11. .and. y.ge.8.2 .and. y.le.8.5) return
-! c     if (ichar(ch).eq.13) return
-  
-  c *** initial values for variables
-! c     xpt = x
-! c     ypt = y
-! c     adiffx = .0625
-! c     adiffy = .0625
-! c     odiffx = adiffx
-! c     odiffy = adiffy
-! c     atomid = '         '
-! c     alabel = '      '
-! c     iflag = 0
-! c     nflag = 0
-! 
-! c     rewind(npf)
-! 
-! c 2   read(npf,3,end=4) label,tomid,xx,yy
-! c 3   format(11x,a6,3x,a9,4x,2f8.0)
-! c     diffx = abs(xx-xpt)
-! c     diffy = abs(yy-ypt)
-! c     if (diffx.le.adiffx .and. diffy.le.adiffy) nflag=nflag+1
-! c     if (diffx.le.odiffx .and. diffy.le.odiffy) then
-! c        atomid = tomid
-! c        alabel = label
-! c        odiffx = diffx
-! c        odiffy = diffy
-! c     end if
-! c     go to 2
-! 
-! c 4   if (nflag.eq.0) write(str,5) 
-! c     if (nflag.eq.1) write(str,6) alabel,atomid
-! c     if (nflag.gt.1) write(str,7) alabel,atomid
-! c 5   format('Not near atom center')
-! c 6   format(a6,1x,a9)
-! c 7   format(a6,1x,a9,' + ??')
-  
-  c *** erase rectangle
-! c     call pgsci(0)
-! c     call pgsfs(1)
-! c     call pgrect(0.,2.8,8.2,8.5)
-  c *** redraw empty rectangle
-! c     call pgsci(1)
-! c     call pgsfs(2)
-! c     call pgrect(0.,2.8,8.2,8.5)
-  
-  c *** print atom information in rectangle
-! c     call pgtext(0.1,8.3,str)
-  
-! c     go to 1
-  
-! c     end
-  
-  c *** end of PGPLOT specific routines
-  c ****************************************************************
---- 5376,5558 ----
-  c     or via e-mail to tjp@astro.caltech.edu. 
-  c ****************************************************************
-  
-!       subroutine initsc
-!       character*10 outdev
-!       common /ns/ npf,ndraw,norient,nvar
-!       integer pgbeg
-  c     
-!       xwid=11.
-!       yhgt=8.5
-  c     
-  c *** The following is for PGPLOT on an X-windows system.
-!       outdev = '/XWINDOW'
-  c *** The following is for PGPLOT on an MS-DOS system.
-  c     outdev = '/MS'
-  c *** The following is for PGPLOT on a Macintosh system.
-  c     outdev = '/MAC'
-  
-!       open(npf,status='scratch')
-  
-!       if (pgbeg(0,' ',1,1) .ne. 1) call exitng(8)
-  
-  c     switch black and white
-!       call pgscr(0,1.,1.,1.)
-!       call pgscr(1,0.,0.,0.)
-  
-  c     set up drawing window
-!       call pgpage
-!       call pgqch(osize)
-!       call pgsch(0.)
-!       call pgvstd
-!       call pgwnad(0.,xwid,0.,yhgt)
-!       call pgsch(osize)
-!       call pgbox('BCT',1.,0,'BCT',1.,0)
-!       call pgsci(1)
-!       call pgsfs(2)
-!       call pgrect(10.4,11.,8.2,8.5)
-!       call pgtext(10.5,8.3,'EXIT')
-  
-!       return
-!       end
-  
-!       subroutine colrsc(icolor)
-  c *** set plot color
-  c *** in ORTEP icolor=0 => black
-  c *** PGPLOT is set up for 1=black
-!       common /ns/ npf,ndraw,norient,nvar
-!       icol=icolor
-!       if (icol.eq.0) icol=1
-!       nvar=icol
-!       if (ndraw.eq.1) call pgsci(icol)
-!       if (ndraw.eq.9) write (npf,111) icol
-!   111 format('COL',1x,i2)
-!       return
-!       end
-  
-!       subroutine penwsc(penw)
-  c *** change pen width
-  c *** PGPLOT measures pen width in 200ths of an inch
-!       common /ns/ npf,ndraw,norient,nvar
-!       ipenw=nint(.001*penw*200.)
-!       if (ipenw.le.0) ipenw=1
-!       if (ipenw.gt.200) ipenw=200
-!       if (ndraw.eq.1) call pgslw(ipenw)
-!       if (ndraw.eq.9) write (npf,111) ipenw
-!   111 format('WID',1x,i3)
-!       return
-!       end
-  
-!       subroutine pensc(x,y,ipen)
-  c *** move the pen
-!       common /trfac/ xtrans,ytrans
-!       common /ns/ npf,ndraw,norient,nvar
-  
-!       if (ipen.eq.2) then
-!          if (ndraw.eq.1) call pgdraw(x+xtrans,y+ytrans)
-!          if (ndraw.eq.9) write (npf,111) x+xtrans,y+ytrans
-!   111    format('LIN',2(1x,f10.6))
-!       end if
-!       if (ipen.eq.3) then
-!          if (ndraw.eq.1) call pgmove(x+xtrans,y+ytrans)
-!          if (ndraw.eq.9) write (npf,112) x+xtrans,y+ytrans
-!   112    format('MOV',2(1x,f10.6))
-!       end if
-  
-!       return
-!       end
-  
-!       subroutine endsc
-!       common /ns/ npf,ndraw,norient,nvar
-  
-!       call curssc
-!       close(npf)
-  
-  c *** tell user to hit <enter> key
-!       call pgsci(0)
-!       call pgsfs(1)
-!       call pgrect(7.5,11.,8.2,8.5)
-!       call pgsci(1)
-!       call pgsfs(2)
-!       call pgrect(7.5,11.,8.2,8.5)
-!       call pgsci(1)
-!       call pgtext(7.6,8.3,'Hit <RETURN> or <ENTER> key')
-  
-!       call pgend
-  
-!       return
-!       end
-  
-!       subroutine curssc
-  c *** correlate screen cursor position with atom positions and display results
-!       character ch
-!       character*21 str
-!       integer pgcurs
-!       character*6 label,alabel
-!       character*9 tomid,atomid
-!       common /trfac/ xtrans,ytrans
-!       common /ns/ npf,ndraw,norient,nvar
-! 
-!       call pgsfs(1)
-!       call pgscf(1)
-!       call pgsch(1.)
-  
-  c *** get cursor position
-!   1   junk = pgcurs(x,y,ch)
-  
-!       if (ch.eq.'x' .or. ch.eq.'X') return
-!       if (ch.eq.'d' .or. ch.eq.'D') return
-!       if (x.ge.10.4 .and. x.le.11. .and. y.ge.8.2 .and. y.le.8.5) return
-!       if (ichar(ch).eq.13) return
-  
-  c *** initial values for variables
-!       xpt = x
-!       ypt = y
-!       adiffx = .0625
-!       adiffy = .0625
-!       odiffx = adiffx
-!       odiffy = adiffy
-!       atomid = '         '
-!       alabel = '      '
-!       iflag = 0
-!       nflag = 0
-! 
-!       rewind(npf)
-! 
-!   2   read(npf,3,end=4) label,tomid,xx,yy
-!   3   format(11x,a6,3x,a9,4x,2f8.0)
-!       diffx = abs(xx-xpt)
-!       diffy = abs(yy-ypt)
-!       if (diffx.le.adiffx .and. diffy.le.adiffy) nflag=nflag+1
-!       if (diffx.le.odiffx .and. diffy.le.odiffy) then
-!          atomid = tomid
-!          alabel = label
-!          odiffx = diffx
-!          odiffy = diffy
-!       end if
-!       go to 2
-! 
-!   4   if (nflag.eq.0) write(str,5) 
-!       if (nflag.eq.1) write(str,6) alabel,atomid
-!       if (nflag.gt.1) write(str,7) alabel,atomid
-!   5   format('Not near atom center')
-!   6   format(a6,1x,a9)
-!   7   format(a6,1x,a9,' + ??')
-  
-  c *** erase rectangle
-!       call pgsci(0)
-!       call pgsfs(1)
-!       call pgrect(0.,2.8,8.2,8.5)
-  c *** redraw empty rectangle
-!       call pgsci(1)
-!       call pgsfs(2)
-!       call pgrect(0.,2.8,8.2,8.5)
-  
-  c *** print atom information in rectangle
-!       call pgtext(0.1,8.3,str)
-  
-!       go to 1
-  
-!       end
-  
-  c *** end of PGPLOT specific routines
-  c ****************************************************************
diff --git a/biology/ortep3/pkg-descr b/biology/ortep3/pkg-descr
deleted file mode 100644
index 829102866d9e..000000000000
--- a/biology/ortep3/pkg-descr
+++ /dev/null
@@ -1,20 +0,0 @@
-This is ORTEP-III, the Oak Ridge Thermal Ellipsoid Plot Program for Crystal
-Structure Illustrations.
-
-(1) If you can use `pgplot' as screen drawing routine, type 
-
-    % make WITH_PGPLOT=yes
-
-(2) If you are not familier to `pgplot', note the followings:
-
-  Before you use ortep3 with pgplot library, 
-  run pgdisp server and setenv PGPLOT_DEV as
-
-    % pgdisp &
-    % setenv PGPLOT_DEV /xwindow
-
-  then you can see the ortep-drawing on a pgplot window.
-
-Examples and documentation or on the web site.
-
-WWW: http://www.ornl.gov/ortep/ortep.html
diff --git a/biology/povchem/Makefile b/biology/povchem/Makefile
deleted file mode 100644
index 6e8ef74ba800..000000000000
--- a/biology/povchem/Makefile
+++ /dev/null
@@ -1,49 +0,0 @@
-# Created by: frankch@waru.life.nthu.edu.tw
-# $FreeBSD$
-
-PORTNAME=	povchem
-PORTVERSION=	1.0
-PORTREVISION=	7
-CATEGORIES=	biology graphics
-MASTER_SITES=	http://www.chemicalgraphics.com/paul/PC_Dist/v1.00/
-DISTFILES=	povchem.c \
-		povchem.cfg \
-		periodic.tab
-DIST_SUBDIR=	povchem
-EXTRACT_ONLY=	#
-
-MAINTAINER=	ports@FreeBSD.org
-COMMENT=	Simple yet powerful tool to generate POV from a PDB file
-
-RUN_DEPENDS=	povray:${PORTSDIR}/graphics/povray-meta
-
-BROKEN=		Unfetchable
-DEPRECATED=	Broken for more than 6 months
-EXPIRATION_DATE=	2015-11-26
-NO_WRKSUBDIR=	yes
-
-USES=		dos2unix
-
-CPPFLAGS+=	-DDATADIR=\"${DATADIR}\" \
-		-DSYSCONFDIR=\"${PREFIX}/etc\"
-
-PLIST_FILES=	bin/povchem etc/povchem.cfg %%DATADIR%%/periodic.tab
-
-post-extract:
-	@(cd ${DISTDIR}/${DIST_SUBDIR} && ${TAR} -cf - ${DISTFILES}) | \
-		(cd ${WRKSRC} && ${TAR} -xf -)
-
-post-patch:
-	@${REINPLACE_CMD} -e \
-		's|%%LOCALBASE%%|${LOCALBASE}|' ${WRKSRC}/povchem.cfg
-
-do-build:
-	cd ${WRKSRC} && ${CC} ${CFLAGS} ${CPPFLAGS} -o povchem povchem.c -lm
-
-do-install:
-	${INSTALL_PROGRAM} ${WRKSRC}/povchem ${STAGEDIR}${PREFIX}/bin
-	${INSTALL_DATA} ${WRKSRC}/povchem.cfg ${STAGEDIR}${PREFIX}/etc
-	@${MKDIR} ${STAGEDIR}${DATADIR}
-	${INSTALL_DATA} ${WRKSRC}/periodic.tab ${STAGEDIR}${DATADIR}
-
-.include <bsd.port.mk>
diff --git a/biology/povchem/distinfo b/biology/povchem/distinfo
deleted file mode 100644
index 057ad72f6a3c..000000000000
--- a/biology/povchem/distinfo
+++ /dev/null
@@ -1,6 +0,0 @@
-SHA256 (povchem/povchem.c) = 95acaacd11ad040eca9b3f08d51be54cbe1d03f65ebc19808a89d8638f9681b5
-SIZE (povchem/povchem.c) = 102083
-SHA256 (povchem/povchem.cfg) = 638515696a23361ab31601394cd3dca4c51a84f75b0b30735c89edae8a4cfbcc
-SIZE (povchem/povchem.cfg) = 14633
-SHA256 (povchem/periodic.tab) = a025d8e5dc52c98944be5e89e9b7fbbcbe9be85bb89d229bbf89a2b69d36acd2
-SIZE (povchem/periodic.tab) = 1939
diff --git a/biology/povchem/files/patch-povchem.c b/biology/povchem/files/patch-povchem.c
deleted file mode 100644
index 060fb8a056c3..000000000000
--- a/biology/povchem/files/patch-povchem.c
+++ /dev/null
@@ -1,185 +0,0 @@
---- povchem.c.orig	Fri Jul 11 11:49:07 2003
-+++ povchem.c	Fri Jul 11 11:59:23 2003
-@@ -482,7 +482,7 @@
-  */
-   
-   if (*fileName==NULL) {
--    New_String(fileName,"povchem.cfg");
-+    New_String(fileName,SYSCONFDIR "/povchem.cfg");
-     if ((config=fopen(*fileName,"r"))==NULL) {
-       puts("Can't read the configuration file \"povchem.cfg\"!");
-       perror("Reason");
-@@ -731,7 +731,7 @@
- 
- no_config:
- 
--  if (!PERIODIC_TABLE_FILE) New_String(&PERIODIC_TABLE_FILE,"periodic.tab");
-+  if (!PERIODIC_TABLE_FILE) New_String(&PERIODIC_TABLE_FILE,DATADIR "/periodic.tab");
-   if (!FINISH) New_String(&FINISH,"Plastic");
-   if (!FINISH_DECLARATION) New_String(&FINISH_DECLARATION,"\
-   finish {\n\
-@@ -742,7 +742,7 @@
-     phong 0.3\n\
-     phong_size 50\n\
-     specular 0.0\n\
--  }\n\n");
-+  };\n\n");
- 
-   if (POVRAY && (!POV_OPTIONS || !POV_WIDTH) ) {
-     puts("Warning: to run POV-Ray from PovChem, you must define *all* the");
-@@ -977,10 +977,10 @@
-   if (model==CPK ||
-       (model==BALLnSTICK && ballSizeModel==PROPORTIONAL) ) {
-     if (model==BALLnSTICK)
--      fprintf(pov,"#declare Proportionality_Constant = %.*g\n",SF,ballRadius);
-+      fprintf(pov,"#declare Proportionality_Constant = %.*g;\n",SF,ballRadius);
-     for (Z=0;Z<NUM_ELEMENTS;Z++) {
-       if (PeriodicTable[Z].isPresent) {
--        fprintf(pov,"#declare %s_Radius = %.*g",
-+        fprintf(pov,"#declare %s_Radius = %.*g;",
-                     PeriodicTable[Z].name,SF,PeriodicTable[Z].vdW);
-         if (model==BALLnSTICK)
-           fputs("*Proportionality_Constant\n",pov);
-@@ -989,13 +989,13 @@
-       }
-     }
-   } else
--    fprintf(pov,"#declare All_Atom_Radius = %.*g\n",SF,Determine_Radius(0));
-+    fprintf(pov,"#declare All_Atom_Radius = %.*g;\n",SF,Determine_Radius(0));
-   fputs("\n",pov);
- 
-   if (sphereColorModel==BY_ELEMENT || cylinderColorModel==BY_ELEMENT) {
-     for (Z=0;Z<NUM_ELEMENTS;Z++) {
-       if (PeriodicTable[Z].isPresent) {
--        fprintf(pov,"#declare Atom_%s_Color = color rgb <%.5g, %.5g, %.5g>\n",
-+        fprintf(pov,"#declare Atom_%s_Color = color rgb <%.5g, %.5g, %.5g>;\n",
-                     PeriodicTable[Z].name,RED(Z),GREEN(Z),BLUE(Z));
-       }
-     }
-@@ -1003,20 +1003,20 @@
-   }
- 
-   if (sphereColorModel==ALL_THE_SAME)
--    fprintf(pov,"#declare All_Atom_Color = color rgb <%.5g, %.5g, %.5g>\n\n",
-+    fprintf(pov,"#declare All_Atom_Color = color rgb <%.5g, %.5g, %.5g>;\n\n",
-                 allSphereColor.r,allSphereColor.g,allSphereColor.b);
- 
-   if (sphereColorModel==BY_PDB) {
-     if (ballSizeModel==CONSTANT) {
-       fputs("#declare Atom_All =\n  sphere {\n",pov);
-       fputs("    <0,0,0>, All_Atom_Radius\n",pov);
--      fprintf(pov,"    finish { %s }\n  }\n\n",FINISH);
-+      fprintf(pov,"    finish { %s }\n  };\n\n",FINISH);
-     } else {
-       for (Z=0;Z<NUM_ELEMENTS;Z++) {
-         if (PeriodicTable[Z].isPresent) {
-           fprintf(pov,"#declare Atom_%s =\n  sphere {\n",PeriodicTable[Z].name);
-           fprintf(pov,"    <0,0,0>, %s_Radius\n",PeriodicTable[Z].name);
--          fprintf(pov,"    finish { %s }\n  }\n",FINISH);
-+          fprintf(pov,"    finish { %s }\n  };\n",FINISH);
-         }
-       }
-       fputs("\n",pov);
-@@ -1024,7 +1024,7 @@
-     tag=firstSphereTag;
-     nTags=nSphereTags;
-     for (i=0;i<nTags;i++) {
--      fprintf(pov,"#declare Atom_%s_Color = color rgb <%.5g, %.5g, %.5g>\n",
-+      fprintf(pov,"#declare Atom_%s_Color = color rgb <%.5g, %.5g, %.5g>;\n",
-                   tag->name,tag->r,tag->g,tag->b);
-       tag=tag->next;
-     }
-@@ -1051,7 +1051,7 @@
-             fputs(      "      pigment { color All_Atom_Color }\n",pov);
-             break;
-         }
--        fprintf(pov,"      finish { %s }\n    }\n  }\n",FINISH);
-+        fprintf(pov,"      finish { %s }\n    }\n  };\n",FINISH);
-       }
-     }
- 
-@@ -1060,7 +1060,7 @@
-     fputs(      "    <0,0,0>, All_Atom_Radius\n",pov);
-     fputs(      "    texture {\n",pov);
-     fputs(      "      pigment { color All_Atom_Color }\n",pov);
--    fprintf(pov,"      finish { %s }\n    }\n  }\n",FINISH);
-+    fprintf(pov,"      finish { %s }\n    }\n  };\n",FINISH);
-   }
- 
-   fputs("\n",pov);
-@@ -1080,26 +1080,26 @@
-   factors[4]=HIGH_ORDER_FACTOR;
- 
-   if (nOrders[H_BOND]) {
--    fprintf(pov,"#declare H_Bond_Radius = %.*g\n",SF,HBondRadius);
--    fprintf(pov,"#declare H_Bond_Color = color rgb <%.5g, %.5g, %.5g>\n",
-+    fprintf(pov,"#declare H_Bond_Radius = %.*g;\n",SF,HBondRadius);
-+    fprintf(pov,"#declare H_Bond_Color = color rgb <%.5g, %.5g, %.5g>;\n",
-                 HBondColor.r,HBondColor.g,HBondColor.b);
-     fputs(      "#declare H_Bond =\n  cylinder {\n",pov);
-     fputs(      "    <0,0,0>, <1,0,0>, H_Bond_Radius\n",pov);
-     fputs(      "    texture {\n",pov);
-     fputs(      "      pigment { H_Bond_Color }\n",pov);
--    fprintf(pov,"      finish { %s }\n    }\n  }\n\n",FINISH);
-+    fprintf(pov,"      finish { %s }\n    }\n  };\n\n",FINISH);
-   }
- 
-   if (model==CYLINDER) 
--    fputs("#declare All_Bond_Radius = All_Atom_Radius\n\n",pov);
-+    fputs("#declare All_Bond_Radius = All_Atom_Radius;\n\n",pov);
-   else {
-     if (cylinderSizeModel==CONSTANT)
--      fprintf(pov,"#declare All_Bond_Radius = %.*g\n\n",SF,cylinderRadius);
-+      fprintf(pov,"#declare All_Bond_Radius = %.*g;\n\n",SF,cylinderRadius);
-     else {
--      fprintf(pov,"#declare Single_Bond_Radius = %.*g\n",SF,cylinderRadius);
-+      fprintf(pov,"#declare Single_Bond_Radius = %.*g;\n",SF,cylinderRadius);
-       for (i=DOUBLE;i<=HIGH_ORDER;i++) {
-         if (nOrders[i])
--          fprintf(pov,"#declare %sBond_Radius = Single_Bond_Radius*%.*g\n",
-+          fprintf(pov,"#declare %sBond_Radius = Single_Bond_Radius*%.*g;\n",
-                      orderTypes[i],SF,factors[i]);
-       }
-       fputs("\n",pov);
-@@ -1107,7 +1107,7 @@
-   }
- 
-   if (cylinderColorModel==ALL_THE_SAME)
--    fprintf(pov,"#declare All_Bond_Color = color rgb <%.5g, %.5g, %.5g>\n\n",
-+    fprintf(pov,"#declare All_Bond_Color = color rgb <%.5g, %.5g, %.5g>;\n\n",
-                 allCylinderColor.r,allCylinderColor.g,allCylinderColor.b);
- 
-   fputs(      "#declare Bond =\n  cylinder {\n",pov);
-@@ -1124,12 +1124,12 @@
-   } else
-     fprintf(pov,"    finish { %s }\n",FINISH);
-     
--  fputs(      "  }\n\n",pov);
-+  fputs(      "  };\n\n",pov);
- 
-   if (cylinderColorModel==BY_PDB && firstCylinderTag!=firstSphereTag) {
-     tag=firstCylinderTag;
-     for (i=0;i<nCylinderTags;i++) {
--      fprintf(pov,"#declare Bond_%s_Color = color rgb <%.5g, %.5g, %.5g>\n",
-+      fprintf(pov,"#declare Bond_%s_Color = color rgb <%.5g, %.5g, %.5g>;\n",
-                   tag->name,tag->r,tag->g,tag->b);
-       tag=tag->next;
-     }
-@@ -2092,7 +2092,7 @@
-  * the origin, looking along +Z, sky along +Y.
-  */
-  
--  fprintf(pov,"#declare Camera_Position = < %.6g, %.6g, %.6g >\n\n",
-+  fprintf(pov,"#declare Camera_Position = < %.6g, %.6g, %.6g >;\n\n",
-               eye.x,eye.y,eye.z);
- 
-   fputs(      "camera{\n",pov);
-@@ -2317,7 +2317,7 @@
- 
- /*-------------------- the main program body --------------------------*/
- 
--void main(int argc, char *argv[])
-+int main(int argc, char *argv[])
- {
-   char *pdbName, *configName=NULL;
-   char *tgaName=NULL, *leftTga=NULL, *rightTga=NULL;
diff --git a/biology/povchem/files/patch-povchem.cfg b/biology/povchem/files/patch-povchem.cfg
deleted file mode 100644
index c24c2a4795b9..000000000000
--- a/biology/povchem/files/patch-povchem.cfg
+++ /dev/null
@@ -1,20 +0,0 @@
---- povchem.cfg.orig	Tue Aug  8 03:13:31 2000
-+++ povchem.cfg	Tue Aug  8 03:16:16 2000
-@@ -294,7 +294,7 @@
- # or leave blank the "POVRay" line, and the next five options will be ignored.
- #
- #POVRay =        d:\graphics\povray\povray.exe
--POVRay =        /usr/local/bin/povray
-+POVRay =        %%LOCALBASE%%/bin/povray
- POVWidth =      640
- POVOptions =    +V -D +Q9 +A +FT +B32
- RunPOVRay =     No
-@@ -331,7 +331,7 @@
- # the type of image POV-Ray generates - usually TGA (also called TARGA).
- #
- #Viewer = c:\util\dvpeg.exe
--Viewer = /usr/local/bin/xv
-+Viewer = %%LOCALBASE%%/bin/display
- 
- # If ColorSplit is Proportional, 'Power' determines the power of the vdW radii
- # to which the point of color change is proportional. See the manual for
diff --git a/biology/povchem/pkg-descr b/biology/povchem/pkg-descr
deleted file mode 100644
index 4feff579a14e..000000000000
--- a/biology/povchem/pkg-descr
+++ /dev/null
@@ -1,8 +0,0 @@
-PovChem is a powerful tool to generate a POV format file from a PDB entry.
-It supports CPK, Ball-n-Stick and Cylinder model. You could adjust a lot
-of parameters to get a good molecuar graphic.
-
-The document could be found at 
-    http://www.chemicalgraphics.com/paul/Manual.html
-
-WWW: http://www.chemicalgraphics.com/paul/PovChem.html