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| author | jasone <jasone@FreeBSD.org> | 2009-06-21 14:18:51 +0800 |
|---|---|---|
| committer | jasone <jasone@FreeBSD.org> | 2009-06-21 14:18:51 +0800 |
| commit | 8a76de78f647932f3188121f4a91ad5d3138f0e5 (patch) | |
| tree | ae264ffd136c8cf610852eb3280f1b6505c6fc89 /biology | |
| parent | 7864c847be03dc5807a3f5ff2b3897829778c3dc (diff) | |
| download | freebsd-ports-gnome-8a76de78f647932f3188121f4a91ad5d3138f0e5.tar.gz freebsd-ports-gnome-8a76de78f647932f3188121f4a91ad5d3138f0e5.tar.zst freebsd-ports-gnome-8a76de78f647932f3188121f4a91ad5d3138f0e5.zip | |
Update to Crux 1.1.0.
Fix the ATLAS/LAPACK build option.
Diffstat (limited to 'biology')
| -rw-r--r-- | biology/crux/Makefile | 8 | ||||
| -rw-r--r-- | biology/crux/distinfo | 6 | ||||
| -rw-r--r-- | biology/crux/pkg-plist | 2 |
3 files changed, 7 insertions, 9 deletions
diff --git a/biology/crux/Makefile b/biology/crux/Makefile index 437c646d1308..e2f41b350aa7 100644 --- a/biology/crux/Makefile +++ b/biology/crux/Makefile @@ -6,7 +6,7 @@ # PORTNAME= crux -PORTVERSION= 1.0.1 +PORTVERSION= 1.1.0 CATEGORIES= python biology MASTER_SITES= http://www.canonware.com/download/Crux/ @@ -24,15 +24,15 @@ OPTIONS= SYS_LINALG "Enable system ATLAS/LAPACK" Off .include <bsd.port.pre.mk> -.if defined(WITH_SYS_LINALG) CPPFLAGS+= -I${LOCALBASE}/include LDFLAGS+= -L${LOCALBASE}/lib -CONFIGURE_ARGS+= --enable-sys-linalg CONFIGURE_ENV+= CPPFLAGS="${CPPFLAGS}" LDFLAGS="${LDFLAGS}" +USE_FORTRAN= yes +.if defined(WITH_SYS_LINALG) +CONFIGURE_ARGS+= --enable-sys-linalg LIB_DEPENDS+= atlas.2:${PORTSDIR}/math/atlas .else CONFIGURE_ARGS+= --disable-sys-linalg -USE_FORTRAN= yes .endif post-install: diff --git a/biology/crux/distinfo b/biology/crux/distinfo index da851ea3cc85..e7efa757dd20 100644 --- a/biology/crux/distinfo +++ b/biology/crux/distinfo @@ -1,3 +1,3 @@ -MD5 (crux-1.0.1.tar.bz2) = 782c27c686112f22f2808e7a99945ad7 -SHA256 (crux-1.0.1.tar.bz2) = de16b3a43d7b695b8b227fbefae87477d91c0f9a8a7695eacc453b3511256417 -SIZE (crux-1.0.1.tar.bz2) = 1169772 +MD5 (crux-1.1.0.tar.bz2) = ffafa44e7b3886d2a86168da23cf63a5 +SHA256 (crux-1.1.0.tar.bz2) = 0f3be31d426a2c94c30213371aa1320a1c711a2870b78bace6f5eba8b01a93da +SIZE (crux-1.1.0.tar.bz2) = 1188496 diff --git a/biology/crux/pkg-plist b/biology/crux/pkg-plist index 2b8bd492ac0b..146a86412c1c 100644 --- a/biology/crux/pkg-plist +++ b/biology/crux/pkg-plist @@ -55,8 +55,6 @@ bin/MrRogers share/Crux/lib/libCx.so share/Crux/parsers/Fasta.log share/Crux/parsers/Fasta.pickle -share/Crux/parsers/Newick.log -share/Crux/parsers/Newick.pickle @dirrm %%PYTHON_SITELIBDIR%%/Crux/DistMatrix @dirrm %%PYTHON_SITELIBDIR%%/Crux/include/Crux/DistMatrix @dirrm %%PYTHON_SITELIBDIR%%/Crux/include/Crux/Mc3 |