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authorwen <wen@FreeBSD.org>2016-08-08 19:21:04 +0800
committerwen <wen@FreeBSD.org>2016-08-08 19:21:04 +0800
commit1cf06a88e8bec5d534a3f6762b8ea995e87262ac (patch)
treec0193ed097f2a26f5a5a7cc829229eca03cd9763 /biology
parente7a4ba3ec143a0496f898f01c28e9fd32dabe7f5 (diff)
downloadfreebsd-ports-gnome-1cf06a88e8bec5d534a3f6762b8ea995e87262ac.tar.gz
freebsd-ports-gnome-1cf06a88e8bec5d534a3f6762b8ea995e87262ac.tar.zst
freebsd-ports-gnome-1cf06a88e8bec5d534a3f6762b8ea995e87262ac.zip
- Update to 1.9 [1]
- Moved to github [1] - Depend on newer sqlalchemy10 [1] - Update pkg-descr and WWW [1] - Limit python to -2.7 [2] - Reset maintainer to python@ for better maintain PR: 211621 Submitted by: pi@ [1], koobs@ [2]
Diffstat (limited to 'biology')
-rw-r--r--biology/pycogent/Makefile13
-rw-r--r--biology/pycogent/distinfo5
2 files changed, 8 insertions, 10 deletions
diff --git a/biology/pycogent/Makefile b/biology/pycogent/Makefile
index 1dd650abc285..f0725592332c 100644
--- a/biology/pycogent/Makefile
+++ b/biology/pycogent/Makefile
@@ -2,14 +2,10 @@
# $FreeBSD$
PORTNAME= pycogent
-PORTVERSION= 1.5.3
-PORTREVISION= 3
+PORTVERSION= 1.9
CATEGORIES= biology python
-MASTER_SITES= SF/${PORTNAME}/PyCogent/${PORTVERSION}
-DISTNAME= PyCogent-${PORTVERSION}
-EXTRACT_SUFX= .tgz
-MAINTAINER= wen@FreeBSD.org
+MAINTAINER= python@FreeBSD.org
COMMENT= Toolkit for statistical analysis of biological sequences
LICENSE= GPLv2
@@ -17,10 +13,11 @@ LICENSE= GPLv2
BUILD_DEPENDS= ${PYNUMPY} \
${LOCALBASE}/bin/cython:lang/cython \
${LOCALBASE}/bin/sphinx-build:textproc/py-sphinx \
- ${PYTHON_PKGNAMEPREFIX}sqlalchemy06>=0.5:databases/py-sqlalchemy06
+ ${PYTHON_PKGNAMEPREFIX}sqlalchemy10>=1.0.13:databases/py-sqlalchemy10
RUN_DEPENDS:= ${BUILD_DEPENDS}
-USES= python
+USES= python:-2.7
+USE_GITHUB= yes
USE_PYTHON= distutils autoplist
.include <bsd.port.mk>
diff --git a/biology/pycogent/distinfo b/biology/pycogent/distinfo
index a8fa5014327f..8b51e3c39cbf 100644
--- a/biology/pycogent/distinfo
+++ b/biology/pycogent/distinfo
@@ -1,2 +1,3 @@
-SHA256 (PyCogent-1.5.3.tgz) = ad883cf4f8bbedd797b934a6ba75a20df2313736e84bff3d5a0e54ac41ea425c
-SIZE (PyCogent-1.5.3.tgz) = 3360039
+TIMESTAMP = 1470681973
+SHA256 (pycogent-pycogent-1.9_GH0.tar.gz) = c9f56d21d764aa62e3e8a9df5a300eb7fb59e502572bec41894d21df19aeceb5
+SIZE (pycogent-pycogent-1.9_GH0.tar.gz) = 3744597