- Update to 2.5.0.

Approved by:	maho (mentor, implicit)

12 files changed, 54 insertions, 111 deletions

diff --git a/cad/gmsh/Makefile b/cad/gmsh/Makefile
index 02fd6185e97b..07a5d7e107b6 100644
--- a/cad/gmsh/Makefile
+++ b/cad/gmsh/Makefile
@@ -6,8 +6,7 @@
 #
 
 PORTNAME=	gmsh
-PORTVERSION=	2.4.2
-PORTREVISION=	5
+PORTVERSION=	2.5.0
 CATEGORIES=	cad
 MASTER_SITES=	http://www.geuz.org/gmsh/src/ \
 		http://glaros.dtc.umn.edu/gkhome/fetch/sw/metis/
@@ -24,6 +23,8 @@ LIB_DEPENDS=	fltk.1:${PORTSDIR}/x11-toolkits/fltk \
 		jpeg.11:${PORTSDIR}/graphics/jpeg \
 		lapack.4:${PORTSDIR}/math/lapack
 
+WRKSRC=		${WRKDIR}/${PORTNAME}-${PORTVERSION}-source
+
 SLAVEDIRS=	cad/gmsh-occ
 
 USE_FORTRAN=	yes
@@ -73,7 +74,7 @@ IGNORE=		requires that WITHOUT_METIS is not set if WITH_TAUCS is set
 .if !defined(WITHOUT_METIS)
 CMAKE_ARGS+=	-DENABLE_METIS=ON
 .if defined(NOPORTDOCS)
-IGNORE=		The license for Metis requires that its documentation is included
+IGNORE=		the license for Metis requires that its documentation is included
 .endif
 DISTFILES+=	manual.pdf
 PLIST_SUB+=	METIS=""
@@ -190,6 +191,10 @@ post-extract:
 	@${ECHO} "because Taucs requires Metis." >> ${PKGMESSAGE}
 .endif
 
+post-patch:
+	${REINPLACE_CMD} -e s+share/doc/gmsh+${DOCSDIR_REL}+ \
+		-e s+share/man/man1+man/man1+ ${WRKSRC}/CMakeLists.txt
+
 post-install:
 .if !defined(WITHOUT_SHARED_LIB)
 	${MV} -f ${PREFIX}/lib/libGmsh.so ${PREFIX}/lib/libGmsh.so.0
diff --git a/cad/gmsh/distinfo b/cad/gmsh/distinfo
index 135313201723..a65b4c032831 100644
--- a/cad/gmsh/distinfo
+++ b/cad/gmsh/distinfo
@@ -1,4 +1,4 @@
-SHA256 (gmsh/gmsh-2.4.2-source.tgz) = b922b1f8f63085361cb4b94a16eb72b4d75d580d5610ebeeccd0a2223920acc1
-SIZE (gmsh/gmsh-2.4.2-source.tgz) = 3109391
+SHA256 (gmsh/gmsh-2.5.0-source.tgz) = db1d3b92e56a85be9ec1c020aa2c705ccf5b7f0d00fa0f29b50efc73b378debc
+SIZE (gmsh/gmsh-2.5.0-source.tgz) = 3642009
 SHA256 (gmsh/manual.pdf) = 8a682ee7f02380f52d5efdde5f9f9d8e927a4f4eb29287a878c1016225568911
 SIZE (gmsh/manual.pdf) = 206713
diff --git a/cad/gmsh/files/patch-CMakeLists.txt b/cad/gmsh/files/patch-CMakeLists.txt
index 2e0e6b18acc6..aa5568412b56 100644
--- a/cad/gmsh/files/patch-CMakeLists.txt
+++ b/cad/gmsh/files/patch-CMakeLists.txt
@@ -1,21 +1,21 @@
---- CMakeLists.txt.orig	2009-09-21 13:54:49.000000000 -0500
-+++ CMakeLists.txt	2010-01-17 21:14:51.000000000 -0600
-@@ -41,6 +41,7 @@
+--- CMakeLists.txt.orig	2010-10-15 13:35:00.000000000 +0000
++++ CMakeLists.txt	2011-07-25 03:34:11.000000000 +0000
+@@ -53,6 +53,7 @@
  option(ENABLE_TAUCS "Enable Taucs linear algebra solver" ON)
  option(ENABLE_TETGEN "Enable Tetgen mesh generator" ON)
  option(ENABLE_TETGEN_NEW "Enable experimental version of Tetgen" OFF)
 +option(INSTALL_DOCS "Install the docs (FreeBSD only)" ON)
  
  set(GMSH_MAJOR_VERSION 2)
- set(GMSH_MINOR_VERSION 4)
-@@ -478,13 +479,17 @@
- if(ENABLE_TAUCS)
-   find_library(TAUCS_LIB taucs)
+ set(GMSH_MINOR_VERSION 5)
+@@ -574,13 +575,17 @@
+   endif(NOT HAVE_METIS)
+   find_library(TAUCS_LIB taucs PATH_SUFFIXES lib)
    if(TAUCS_LIB)
--    find_path(TAUCS_INC "taucs.h" PATH_SUFFIXES src include)
+-    find_path(TAUCS_INC "taucs.h" PATH_SUFFIXES src include taucs)
 -    if(TAUCS_INC)
--      set(HAVE_TAUCS TRUE)
--      list(APPEND CONFIG_OPTIONS "Taucs")
+-      set_config_option(HAVE_TAUCS "Taucs")
+-      add_definitions(-DTAUCS_CILK)
 -      list(APPEND EXTERNAL_LIBRARIES ${TAUCS_LIB})
 -      list(APPEND EXTERNAL_INCLUDES ${TAUCS_INC})
 -    endif(TAUCS_INC)
@@ -33,32 +33,16 @@
    endif(TAUCS_LIB)
  endif(ENABLE_TAUCS)
  
-@@ -518,7 +523,7 @@
+@@ -673,7 +678,7 @@
    list(LENGTH OCC_LIBS NUM_OCC_LIBS)
    if(NUM_OCC_LIBS EQUAL NUM_OCC_LIBS_REQUIRED)
      find_path(OCC_INC "BRep_Tool.hxx" PATHS ENV CASROOT PATH_SUFFIXES inc 
 -              include opencascade)
 +              include opencascade OpenCAS/ros/inc)
      if(OCC_INC)
-       set(HAVE_OCC TRUE)
-       list(APPEND CONFIG_OPTIONS "OpenCascade")
-@@ -654,15 +659,6 @@
- if(HAVE_LAPACK AND LAPACK_FLAGS)
-   set_target_properties(shared PROPERTIES LINK_FLAGS ${LAPACK_FLAGS})
- endif(HAVE_LAPACK AND LAPACK_FLAGS)
--if(HAVE_FLTK)
--  target_link_libraries(shared ${FLTK_LIBRARIES} ${EXTERNAL_LIBRARIES} 
--                        ${OPENGL_LIBRARIES} ${LAPACK_LIBRARIES})
--elseif(HAVE_OPENGL)
--  target_link_libraries(shared ${EXTERNAL_LIBRARIES} ${OPENGL_LIBRARIES}
--                        ${LAPACK_LIBRARIES})
--else(HAVE_FLTK)
--  target_link_libraries(shared ${EXTERNAL_LIBRARIES} ${LAPACK_LIBRARIES})
--endif(HAVE_FLTK)
- 
- # binary targets
- if(HAVE_FLTK)
-@@ -762,13 +758,15 @@
+       set_config_option(HAVE_OCC "OpenCascade")
+       list(APPEND EXTERNAL_LIBRARIES ${OCC_LIBS})
+@@ -969,11 +974,13 @@
  install(TARGETS gmsh DESTINATION ${GMSH_BIN} OPTIONAL)
  install(TARGETS lib shared DESTINATION lib OPTIONAL)
  install(FILES ${GMSH_API} DESTINATION include/gmsh)
@@ -75,8 +59,5 @@
 +  install(FILES ${DEMO_FILES} DESTINATION ${GMSH_DOC}/demos)
 +endif(INSTALL_DOCS)
  if(UNIX AND NOT CYGWIN)
--  install(FILES ${CMAKE_SOURCE_DIR}/doc/gmsh.1 DESTINATION share/man/man1)
-+  install(FILES ${CMAKE_SOURCE_DIR}/doc/gmsh.1 DESTINATION man/man1)
+   install(FILES ${CMAKE_CURRENT_SOURCE_DIR}/doc/gmsh.1 DESTINATION ${GMSH_MAN})
  endif(UNIX AND NOT CYGWIN)
- 
- find_program(MAKEINFO makeinfo)
diff --git a/cad/gmsh/files/patch-Common::StringUtils.cpp b/cad/gmsh/files/patch-Common::StringUtils.cpp
deleted file mode 100644
index 41875a388ad1..000000000000
--- a/cad/gmsh/files/patch-Common::StringUtils.cpp
+++ /dev/null
@@ -1,10 +0,0 @@
---- Common/StringUtils.cpp-xxx	2009-07-20 16:49:34.000000000 -0500
-+++ Common/StringUtils.cpp	2009-07-20 16:49:53.000000000 -0500
-@@ -9,6 +9,7 @@
- 
- #include "StringUtils.h"
- #include "GmshMessage.h"
-+#include <cstdio>
- 
- void SwapBytes(char *array, int size, int n)
- {
diff --git a/cad/gmsh/files/patch-Fltk::aboutWindow.cpp b/cad/gmsh/files/patch-Fltk::aboutWindow.cpp
deleted file mode 100644
index ead078b73046..000000000000
--- a/cad/gmsh/files/patch-Fltk::aboutWindow.cpp
+++ /dev/null
@@ -1,10 +0,0 @@
---- Fltk/aboutWindow.cpp-xxx	2009-07-20 16:56:09.000000000 -0500
-+++ Fltk/aboutWindow.cpp	2009-07-20 16:56:21.000000000 -0500
-@@ -13,6 +13,7 @@
- #include "StringUtils.h"
- #include "OS.h"
- #include "Context.h"
-+#include <cstdio>
- 
- static void help_license_cb(Fl_Widget *w, void *data)
- {
diff --git a/cad/gmsh/files/patch-Fltk::messageWindow.cpp b/cad/gmsh/files/patch-Fltk::messageWindow.cpp
deleted file mode 100644
index a4f8bf636f3d..000000000000
--- a/cad/gmsh/files/patch-Fltk::messageWindow.cpp
+++ /dev/null
@@ -1,10 +0,0 @@
---- Fltk/messageWindow.cpp-xxx	2009-07-20 16:50:18.000000000 -0500
-+++ Fltk/messageWindow.cpp	2009-07-20 16:50:28.000000000 -0500
-@@ -4,6 +4,7 @@
- // bugs and problems to <gmsh@geuz.org>.
- 
- #include <string.h>
-+#include <cstdio>
- #include <FL/Fl_Box.H>
- #include <FL/Fl_Return_Button.H>
- #include <FL/fl_ask.H>
diff --git a/cad/gmsh/files/patch-Geo::GModelIO_CGNS.cpp b/cad/gmsh/files/patch-Geo::GModelIO_CGNS.cpp
deleted file mode 100644
index 383b5d518561..000000000000
--- a/cad/gmsh/files/patch-Geo::GModelIO_CGNS.cpp
+++ /dev/null
@@ -1,10 +0,0 @@
---- Geo/GModelIO_CGNS.cpp-xxx	2009-07-20 16:54:23.000000000 -0500
-+++ Geo/GModelIO_CGNS.cpp	2009-07-20 16:55:01.000000000 -0500
-@@ -24,6 +24,7 @@
- #define omp_destroy_lock(x)
- #endif
- 
-+#include <cstdio>
- #include <cstring>
- #include <iostream>  // DBG
- #include <map>
diff --git a/cad/gmsh/files/patch-Geo_MZoneBoundary.h b/cad/gmsh/files/patch-Geo_MZoneBoundary.h
new file mode 100644
index 000000000000..47b467ad8e5a
--- /dev/null
+++ b/cad/gmsh/files/patch-Geo_MZoneBoundary.h
@@ -0,0 +1,18 @@
+--- Geo/MZoneBoundary.h-orig	2010-10-15 13:35:00.000000000 +0000
++++ Geo/MZoneBoundary.h	2011-07-25 03:22:05.000000000 +0000
+@@ -317,12 +317,12 @@
+   {
+     // NBN: using FaceT* so need to dealloc:
+     int icount = 0;
+-    GlobalBoVertexMap::iterator itEnd = globalBoVertMap.end();
+-    for (GlobalBoVertexMap::iterator itBoV = globalBoVertMap.begin(); 
++    typename GlobalBoVertexMap::iterator itEnd = globalBoVertMap.end();
++    for (typename GlobalBoVertexMap::iterator itBoV = globalBoVertMap.begin(); 
+           itBoV != itEnd; ++itBoV)
+     {
+       // ... clear the faces
+-      typename GlobalVertexData<FaceT>& ref = itBoV->second;
++      GlobalVertexData<FaceT>& ref = itBoV->second;
+       size_t nf = ref.faces.size();
+       for (int i=0; i<nf; ++i) {
+         ++ icount;
diff --git a/cad/gmsh/files/patch-Post::PViewDataIO.cpp b/cad/gmsh/files/patch-Post::PViewDataIO.cpp
deleted file mode 100644
index 1ba6307ccd92..000000000000
--- a/cad/gmsh/files/patch-Post::PViewDataIO.cpp
+++ /dev/null
@@ -1,10 +0,0 @@
---- Post/PViewDataIO.cpp-xxx	2009-07-20 16:53:25.000000000 -0500
-+++ Post/PViewDataIO.cpp	2009-07-20 16:53:37.000000000 -0500
-@@ -4,6 +4,7 @@
- // bugs and problems to <gmsh@geuz.org>.
- 
- #include <string.h>
-+#include <cstdio>
- #include "GmshMessage.h"
- #include "Numeric.h"
- #include "PViewData.h"
diff --git a/cad/gmsh/files/patch-Solver::linearSystemCSR.cpp b/cad/gmsh/files/patch-Solver::linearSystemCSR.cpp
deleted file mode 100644
index 20a278b2dcb6..000000000000
--- a/cad/gmsh/files/patch-Solver::linearSystemCSR.cpp
+++ /dev/null
@@ -1,11 +0,0 @@
---- Solver/linearSystemCSR.cpp.orig	2010-01-02 16:10:27.000000000 -0600
-+++ Solver/linearSystemCSR.cpp	2010-01-02 16:10:40.000000000 -0600
-@@ -245,7 +245,7 @@
- }
- 
- template <class scalar>
--static void sortColumns(int NbLines, 
-+void sortColumns(int NbLines, 
-                         int nnz, 
-                         INDEX_TYPE *ptr, 
-                         INDEX_TYPE *jptr, 
diff --git a/cad/gmsh/files/patch-contrib::Chaco::main::Gmsh_printf.cpp b/cad/gmsh/files/patch-contrib::Chaco::main::Gmsh_printf.cpp
deleted file mode 100644
index e64cab811bcb..000000000000
--- a/cad/gmsh/files/patch-contrib::Chaco::main::Gmsh_printf.cpp
+++ /dev/null
@@ -1,10 +0,0 @@
---- contrib/Chaco/main/Gmsh_printf.cpp-xxx	2009-07-20 16:52:04.000000000 -0500
-+++ contrib/Chaco/main/Gmsh_printf.cpp	2009-07-20 16:52:15.000000000 -0500
-@@ -4,6 +4,7 @@
- // bugs and problems to <gmsh@geuz.org>.
- 
- #include <cstring>
-+#include <cstdio>
- #include "GmshMessage.h"
- 
- // Overload the printf statements in Chaco to write using Msg::Direct in gmsh
diff --git a/cad/gmsh/pkg-plist b/cad/gmsh/pkg-plist
index f45753a25309..e95397549092 100644
--- a/cad/gmsh/pkg-plist
+++ b/cad/gmsh/pkg-plist
@@ -2,6 +2,7 @@ bin/gmsh
 %%STATIC_LIB%%lib/libGmsh.a
 %%SHARED_LIB%%lib/libGmsh.so
 %%SHARED_LIB%%lib/libGmsh.so.0
+include/gmsh/Cell.h
 include/gmsh/CellComplex.h
 include/gmsh/ChainComplex.h
 include/gmsh/DILevelset.h
@@ -22,6 +23,8 @@ include/gmsh/GmshConfig.h
 include/gmsh/GmshDefines.h
 include/gmsh/GmshMessage.h
 include/gmsh/GmshVersion.h
+include/gmsh/Homology.h
+include/gmsh/JacobianBasis.h
 include/gmsh/MEdge.h
 include/gmsh/MElement.h
 include/gmsh/MElementCut.h
@@ -48,27 +51,33 @@ include/gmsh/SPoint3.h
 include/gmsh/STensor3.h
 include/gmsh/SVector3.h
 include/gmsh/VertexArray.h
+include/gmsh/cartesian.h
+include/gmsh/crossConfTerm.h
 include/gmsh/discreteEdge.h
 include/gmsh/discreteFace.h
 include/gmsh/discreteRegion.h
 include/gmsh/discreteVertex.h
 include/gmsh/dofManager.h
 include/gmsh/drawContext.h
+include/gmsh/elasticitySolver.h
 include/gmsh/elasticityTerm.h
 include/gmsh/femTerm.h
 include/gmsh/fullMatrix.h
-include/gmsh/functionSpace.h
 include/gmsh/gmp_blas.h
 include/gmsh/gmp_matrix.h
 include/gmsh/gmp_normal_form.h
 include/gmsh/laplaceTerm.h
 include/gmsh/linearSystem.h
+include/gmsh/linearSystemCSR.h
 include/gmsh/linearSystemFull.h
 include/gmsh/linearSystemGMM.h
 include/gmsh/meshGEdge.h
 include/gmsh/meshGFace.h
 include/gmsh/meshGFaceDelaunayInsertion.h
 include/gmsh/meshGFaceOptimize.h
+include/gmsh/mpz.h
+include/gmsh/orthogonalTerm.h
+include/gmsh/polynomialBasis.h
 include/gmsh/simpleFunction.h
 %%PORTDOCS%%%%DOCSDIR%%/CREDITS.txt
 %%PORTDOCS%%%%DOCSDIR%%/LICENSE.txt
@@ -120,6 +129,7 @@ include/gmsh/simpleFunction.h
 %%PORTDOCS%%%%DOCSDIR%%/tutorial/t8.geo
 %%PORTDOCS%%%%DOCSDIR%%/tutorial/t8.par
 %%PORTDOCS%%%%DOCSDIR%%/tutorial/t9.geo
+%%PORTDOCS%%%%DOCSDIR%%/tutorial/t10.geo
 %%PORTDOCS%%%%DOCSDIR%%/tutorial/view1.pos
 %%PORTDOCS%%%%DOCSDIR%%/tutorial/view2.pos
 %%PORTDOCS%%%%DOCSDIR%%/tutorial/view3.pos