graphics/vigra: update to 1.10.0

- new version 1.10.0
- MASTERSITE changed to github
- Numpy option: make gcc usage functional again for 10.0+
- option descriptions changed from gcc46 to gcc47
- updates and fixes on plist

Changes:	http://ukoethe.github.io/vigra/doc/vigra/CreditsChangelog.html

PR:             ports/188372
Submitted by:   Rainer Hurling
Approved by:    maintainer (timeout), culot (mentor)

3 files changed, 41 insertions, 1172 deletions

diff --git a/graphics/vigra/Makefile b/graphics/vigra/Makefile
index a3a337b010e8..e207de7460aa 100644
--- a/graphics/vigra/Makefile
+++ b/graphics/vigra/Makefile
@@ -2,18 +2,22 @@
 # $FreeBSD$
 
 PORTNAME=	vigra
-PORTVERSION=	1.9.0
-PORTREVISION=	6
+DISTVERSION=	1.10.0
 CATEGORIES=	graphics
-MASTER_SITES=	http://hci.iwr.uni-heidelberg.de/vigra/
-DISTNAME=	${PORTNAME}-${PORTVERSION}-src
+DISTNAME=	${PORTNAME}-${PORTVERSION}-src-with-docu
 
 MAINTAINER=	fluffy@FreeBSD.org
 COMMENT=	VIGRA stands for "Vision with Generic Algorithms"
 
 LICENSE=	MIT
 
-WRKSRC=		${WRKDIR}/${PORTNAME}-${PORTVERSION}
+USE_GITHUB=
+GH_ACCOUNT=     ukoethe
+GH_COMMIT=      e6c21f3
+GH_TAGNAME=     ${GH_COMMIT}
+FETCH_ARGS?=    -Fpr
+
+WRKSRC=		${WRKDIR}/ukoethe-${PORTNAME}-${GH_COMMIT}
 
 USES=		cmake
 CMAKE_ARGS=	-DDEPENDENCY_SEARCH_PREFIX:PATH=${LOCALBASE} \
@@ -23,7 +27,7 @@ USE_LDCONFIG=	yes
 
 OPTIONS_DEFINE=		HDF5 OPENEXR NUMPY
 OPTIONS_DEFAULT=	HDF5 OPENEXR
-NUMPY_DESC=		NumPy mathematical computing (USE Fortran/GCC46+)
+NUMPY_DESC=		NumPy mathematical computing (USE Fortran/GCC47+)
 
 .include <bsd.port.options.mk>
 
@@ -42,10 +46,10 @@ CMAKE_ARGS+=	-DWITH_OPENEXR=0
 .endif
 
 .if ${PORT_OPTIONS:MNUMPY}
-CONFLICTS_BUILD=	python3*
+# Should ignore Python3 since commit f51b0b5
+#CONFLICTS_BUILD=	python3*
 CMAKE_ARGS+=	-DWITH_VIGRANUMPY=1
-USES+=		fortran
-USE_GCC=	yes
+USES+=		compiler:gcc-c++11-lib
 USE_PYTHON=	2
 BUILD_DEPENDS+=	nosetests:${PORTSDIR}/devel/py-nose
 BUILD_DEPENDS+=	${PYTHON_SITELIBDIR}/numpy/core/numeric.py:${PORTSDIR}/math/py-numpy
@@ -92,7 +96,7 @@ pre-everything::
 .if ${PORT_OPTIONS:MNUMPY}
 	@${ECHO} ""
 	@${ECHO} "* BEWARE!"
-	@${ECHO} "* Using py-NumPY implies Fortran and GCC 4.6+ as hard dependencies"
+	@${ECHO} "* Using py-NumPY implies Fortran and GCC 4.7+ as hard dependencies"
 	@${ECHO} "* and require all ports, depending on vigra, to set USE_GCC=yes"
 	@${ECHO} ""
 .endif
diff --git a/graphics/vigra/distinfo b/graphics/vigra/distinfo
index 97d9b171bd8f..8bfe662fae99 100644
--- a/graphics/vigra/distinfo
+++ b/graphics/vigra/distinfo
@@ -1,2 +1,2 @@
-SHA256 (vigra-1.9.0-src.tar.gz) = 8fbdccb553a4925323098ab27b710fbc87d48f37bf81d404994936a31a31cf01
-SIZE (vigra-1.9.0-src.tar.gz) = 30813416
+SHA256 (vigra-1.10.0-src-with-docu.tar.gz) = 5ac7d71c89b6a70e6be1b30a73b9f81f4373e933d9dede175d97ee8024807a8a
+SIZE (vigra-1.10.0-src-with-docu.tar.gz) = 29184620
diff --git a/graphics/vigra/pkg-plist b/graphics/vigra/pkg-plist
index a1ce593deab9..169566782ee6 100644
--- a/graphics/vigra/pkg-plist
+++ b/graphics/vigra/pkg-plist
@@ -6,6 +6,7 @@ include/vigra/affine_registration.hxx
 include/vigra/affinegeometry.hxx
 include/vigra/algorithm.hxx
 include/vigra/array_vector.hxx
+include/vigra/autodiff.hxx
 include/vigra/axistags.hxx
 include/vigra/basicgeometry.hxx
 include/vigra/basicimage.hxx
@@ -43,6 +44,7 @@ include/vigra/functortraits.hxx
 include/vigra/gaborfilter.hxx
 include/vigra/gaussians.hxx
 include/vigra/gradient_energy_tensor.hxx
+include/vigra/graphs.hxx
 include/vigra/hdf5impex.hxx
 include/vigra/histogram.hxx
 include/vigra/imagecontainer.hxx
@@ -76,16 +78,20 @@ include/vigra/multi_array.hxx
 include/vigra/multi_convolution.hxx
 include/vigra/multi_distance.hxx
 include/vigra/multi_fft.hxx
+include/vigra/multi_gridgraph.hxx
 include/vigra/multi_impex.hxx
 include/vigra/multi_iterator.hxx
 include/vigra/multi_iterator_coupled.hxx
+include/vigra/multi_labeling.hxx
 include/vigra/multi_localminmax.hxx
 include/vigra/multi_math.hxx
 include/vigra/multi_morphology.hxx
 include/vigra/multi_opencl.hxx
 include/vigra/multi_pointoperators.hxx
 include/vigra/multi_resize.hxx
+include/vigra/multi_shape.hxx
 include/vigra/multi_tensorutilities.hxx
+include/vigra/multi_watersheds.hxx
 include/vigra/navigator.hxx
 include/vigra/noise_normalization.hxx
 include/vigra/nonlineardiffusion.hxx
@@ -136,6 +142,7 @@ include/vigra/sifImport.hxx
 include/vigra/singular_value_decomposition.hxx
 include/vigra/sized_int.hxx
 include/vigra/slanted_edge_mtf.hxx
+include/vigra/slic.hxx
 include/vigra/splineimageview.hxx
 include/vigra/splines.hxx
 include/vigra/static_assert.hxx
@@ -152,6 +159,7 @@ include/vigra/tuple.hxx
 include/vigra/tv_filter.hxx
 include/vigra/type_lists.hxx
 include/vigra/union_find.hxx
+include/vigra/unittest.hxx
 include/vigra/unsupervised_decomposition.hxx
 include/vigra/utilities.hxx
 include/vigra/voxelneighborhood.hxx
@@ -160,8 +168,8 @@ include/vigra/watersheds3d.hxx
 include/vigra/wigner-matrix.hxx
 include/vigra/windows.h
 lib/libvigraimpex.so
-lib/libvigraimpex.so.4
-lib/libvigraimpex.so.4.190
+lib/libvigraimpex.so.5
+lib/libvigraimpex.so.5.1.10.0
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/__init__.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/__version__.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/analysis.so
@@ -178,6 +186,7 @@ lib/libvigraimpex.so.4.190
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/pyqt/imagewindow.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/pyqt/overlays.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/pyqt/quickdialog.py
+%%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/pyqt/viewer2svg.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/sampling.so
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/tagged_array.py
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/vigra/ufunc.py
@@ -186,1161 +195,17 @@ lib/vigra/VigraConfig.cmake
 lib/vigra/VigraConfigVersion.cmake
 lib/vigra/vigra-targets-%%CMAKE_BUILD_TYPE%%.cmake
 lib/vigra/vigra-targets.cmake
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-%%DOCSDIR%%/vigra/BorderTreatmentMode.html
-%%DOCSDIR%%/vigra/Concepts.html
-%%DOCSDIR%%/vigra/Convolution.html
-%%DOCSDIR%%/vigra/CrackEdgeImage.html
-%%DOCSDIR%%/vigra/CreditsChangelog.html
-%%DOCSDIR%%/vigra/ErrorReporting.html
-%%DOCSDIR%%/vigra/Examples.html
-%%DOCSDIR%%/vigra/FFTWComplexTraits.html
-%%DOCSDIR%%/vigra/FixedPoint16Traits.html
-%%DOCSDIR%%/vigra/FixedPointTraits.html
-%%DOCSDIR%%/vigra/FunctorExpressions.html
-%%DOCSDIR%%/vigra/ImageAnalysis.html
-%%DOCSDIR%%/vigra/ImageDataStructures.html
-%%DOCSDIR%%/vigra/ImageProcessing.html
-%%DOCSDIR%%/vigra/ImportExport.html
-%%DOCSDIR%%/vigra/Installation.html
-%%DOCSDIR%%/vigra/KernelArgumentObjectFactories.html
-%%DOCSDIR%%/vigra/LICENSE.txt
-%%DOCSDIR%%/vigra/MathConstants.html
-%%DOCSDIR%%/vigra/MathFunctionality.html
-%%DOCSDIR%%/vigra/MultiDimensionalArrays.html
-%%DOCSDIR%%/vigra/MultiIteratorPage.html
-%%DOCSDIR%%/vigra/NormTraits.html
-%%DOCSDIR%%/vigra/NumericPromotionTraits.html
-%%DOCSDIR%%/vigra/NumericTraits.html
-%%DOCSDIR%%/vigra/PixelTypes.html
-%%DOCSDIR%%/vigra/PointOperators.html
-%%DOCSDIR%%/vigra/PromoteTraits.html
-%%DOCSDIR%%/vigra/RGBValueTraits.html
-%%DOCSDIR%%/vigra/RationalTraits.html
-%%DOCSDIR%%/vigra/SquareRootTraits.html
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+%%PYTHON%%@dirrmtry %%PYTHON_LIBDIR%%
+@dirrmtry include/vigra/random_forest
+@dirrmtry include/vigra