- Update to 2.9.9

- Add warning that make_jobs_safe may overwhelm some computers
- Portlint

PR:		ports/152152
Submitted by:	Ewgenij Gawrilow <ewgenij.gawrilow@o2online.de>
Approved by:	maho (mentor)

5 files changed, 828 insertions, 1376 deletions

diff --git a/math/polymake/Makefile b/math/polymake/Makefile
index 4bac642d221b..7afc562ce0ed 100644
--- a/math/polymake/Makefile
+++ b/math/polymake/Makefile
@@ -6,61 +6,68 @@
 #
 
 PORTNAME=	polymake
-PORTVERSION=	2.3
-PORTREVISION=	3
-CATEGORIES=	math
-MASTER_SITES=	ftp://ftp.math.tu-berlin.de/pub/combi/polymake/
-
-PATCH_SITES=	${MASTER_SITES}
-PATCHFILES=	${PORTNAME}-${PORTVERSION}-install.diff
+PORTVERSION=	2.9.9
+CATEGORIES=	math java
+MASTER_SITES=	http://wwwopt.mathematik.tu-darmstadt.de/polymake/lib/exe/fetch.php/download/
 
 MAINTAINER=	gawrilow@math.tu-berlin.de
 COMMENT=	A framework for experimental discrete geometry
 
-LIB_DEPENDS=	gmp.10:${PORTSDIR}/math/gmp
+BUILD_DEPENDS=	${SITE_PERL}/${PERL_ARCH}/XML/LibXML.pm:${PORTSDIR}/textproc/p5-XML-LibXML \
+		${SITE_PERL}/XML/Writer.pm:${PORTSDIR}/textproc/p5-XML-Writer \
+		${LOCALBASE}/share/xml/dtd/xhtml/xhtml-lat1.ent:${PORTSDIR}/textproc/xhtml
+RUN_DEPENDS=	${SITE_PERL}/${PERL_ARCH}/XML/LibXML.pm:${PORTSDIR}/textproc/p5-XML-LibXML \
+		${SITE_PERL}/XML/Writer.pm:${PORTSDIR}/textproc/p5-XML-Writer \
+		${LOCALBASE}/share/xml/dtd/xhtml/xhtml-lat1.ent:${PORTSDIR}/textproc/xhtml \
+		${SITE_PERL}/${PERL_ARCH}/Term/ReadLine/Gnu.pm:${PORTSDIR}/devel/p5-ReadLine-Gnu \
+		${SITE_PERL}/${PERL_ARCH}/XML/LibXSLT.pm:${PORTSDIR}/textproc/p5-XML-LibXSLT \
+		${LOCALBASE}/bin/c++filt:${PORTSDIR}/devel/binutils
+LIB_DEPENDS=	gmp.10:${PORTSDIR}/math/gmp \
+		readline.[56]:${PORTSDIR}/devel/readline
 
 USE_GMAKE=	yes
 USE_BZIP2=	yes
 USE_PERL5=	5.8.1+
+USE_GCC=	4.2+
+USE_JAVA=	yes
+JAVA_BUILD=	yes
+JAVA_RUN=	yes
+JAVA_VERSION=	1.6
 
-HAS_CONFIGURE=	yes
-INSTALL_TARGET=	install install-devel
+MAKE_JOBS_SAFE=	yes
+MAKE_ENV+=	ProcessDep=none
 NO_INSTALL_MANPAGES=	yes
 
-PLIST=		${WRKDIR}/pkg-plist
+HAS_CONFIGURE=	yes
+CONFIGURE_ENV+=	JAVA_HOME=${JAVA_HOME}
+CONFIGURE_ARGS+=	--prefix='${PREFIX}' --datadir='${DATADIR}' \
+			--libdir='${PREFIX}/libexec/polymake' \
+			--docdir='${DOCSDIR}' --without-prereq \
+			LDFLAGS='-L${PREFIX}/lib'
+
+USE_LDCONFIG=	yes
 
 .include <bsd.port.pre.mk>
 
-.if ${PERL_LEVEL} >= 501000
-BROKEN=		Does not build with perl >= 5.10
+.if !defined(DISABLE_MAKE_JOBS)
+pre-fetch:
+	@MAKE_JOBS_NUMBER=${MAKE_JOBS_NUMBER}; \
+	if [ $${MAKE_JOBS_NUMBER} -gt 1 ]; then \
+		${ECHO_CMD} "Building this port uses a lot of CPU power, and a lot of memory to the point"; \
+		${ECHO_CMD} "that swap space might be used extensively.  Consider using less threads, as"; \
+		${ECHO_CMD} "this might cause the build to be considerably faster.  Currently the build is"; \
+		${ECHO_CMD} "set to use $${MAKE_JOBS_NUMBER} threads.  To change to <n> threads, use"; \
+		${ECHO_CMD}; \
+		${ECHO_CMD} "make MAKE_JOBS_NUMBER=<n>"; \
+	fi
 .endif
 
-pre-configure:
-	@${REINPLACE_CMD} -e 's|return "$$CXX seems not to be any|\#|' ${WRKSRC}/support/configure.pl
-
-do-configure:
-	cd ${WRKSRC}; \
-	${RM} -f build*/conf.make; \
-	{ ${ECHO_CMD} CC='${CC}'; \
-	  ${ECHO_CMD} CXX='${CXX}'; \
-	  ${ECHO_CMD} Cflags='${CFLAGS} -I${PREFIX}/include'; \
-	  ${ECHO_CMD} CXXflags='${CXXFLAGS} -I${PREFIX}/include'; \
-	  ${ECHO_CMD} LDflags='-L${PREFIX}/lib'; \
-	  ${ECHO_CMD} PREFIX='${PREFIX}'; \
-	  ${ECHO_CMD} InstallTop='$${PREFIX}/share/polymake'; \
-	  ${ECHO_CMD} InstallArch='$${PREFIX}/libexec/polymake'; \
-	  ${ECHO_CMD} InstallDoc='$${PREFIX}${DOCSDIR:S,^${PREFIX},,}'; \
-	  ${ECHO_CMD} InstallLinks='$${PREFIX}/bin'; \
-	  ${ECHO_CMD} PerlExe='${PERL}'; \
-	  ${ECHO_CMD} Arch=; \
-	  ${ECHO_CMD} ProcessDep=none; \
-	} | ${GMAKE} ${MAKE_ENV} LD=${LD} configure
-
-pre-install:
-	${RM} -f `find ${WRKSRC} -name '*.orig'`
-	${SED} -e s,%%PERL_REAL_ARCH%%,`${PERL} -e 'use Config; print $$Config{archname}'`, <${.CURDIR}/pkg-plist > ${PLIST}
-
 post-install:
-	${CP} -p ${PREFIX}/libexec/polymake/Makefile ${PREFIX}/libexec/polymake/Makefile.devel
+	${INSTALL_DATA} ${PREFIX}/libexec/polymake/conf.make ${PREFIX}/libexec/polymake/conf.make.in
+.if !defined(NOPORTDOCS)
+	${SETENV} POLYMAKE_USER_DIR=${WRKDIR}/.polymake-tmp ${GMAKE} -C ${WRKSRC} docs
+.endif
+# Don't use PLIST_SUBS here, as perl might not be installed early enough.
+	@${PERL} -i -pe 'BEGIN{use Config;} s/%%PERL_REAL_ARCH%%/$$Config{archname}/e' ${TMPPLIST}
 
 .include <bsd.port.post.mk>
diff --git a/math/polymake/distinfo b/math/polymake/distinfo
index 5a919ebfa233..a7afec8d44fa 100644
--- a/math/polymake/distinfo
+++ b/math/polymake/distinfo
@@ -1,4 +1,2 @@
-SHA256 (polymake-2.3.tar.bz2) = 3d601cf439c9a07f83bc4253ac2e92cbaefe3f1c2698f9156b6e1683c6d9a5bf
-SIZE (polymake-2.3.tar.bz2) = 2266143
-SHA256 (polymake-2.3-install.diff) = 5b548ab37a36d6cca5aa98b3562f31e7a51e08708388b94b81c6f7addfeefeae
-SIZE (polymake-2.3-install.diff) = 975
+SHA256 (polymake-2.9.9.tar.bz2) = f914dbb4283e3f11c94d2fa7e0da9383c506e15678fe7b05c52eeb939508215e
+SIZE (polymake-2.9.9.tar.bz2) = 12656699
diff --git a/math/polymake/files/patch-support_build.make b/math/polymake/files/patch-support_build.make
deleted file mode 100644
index 0278aedb2632..000000000000
--- a/math/polymake/files/patch-support_build.make
+++ /dev/null
@@ -1,13 +0,0 @@
---- support/build.make	2007-01-17 16:25:44.000000000 +0000
-+++ support/build.make	2010-01-28 22:51:05.116780927 +0000
-@@ -134,10 +134,6 @@
-   endif
- endif # !SourceDir
- 
--ifeq "$(COMOversion)$(ICCversion)$(GCCversion)" ""
--  $(error unknown C++ compiler)
--endif
--
- ifdef COMOversion
-   addinclude = -I$(patsubst $/,%,$(dir $(1))) --preinclude $(notdir $(1))
-   make_dep_opt := -MD --no_preproc_only
diff --git a/math/polymake/pkg-descr b/math/polymake/pkg-descr
index b18dec5df683..74a3334af775 100644
--- a/math/polymake/pkg-descr
+++ b/math/polymake/pkg-descr
@@ -1,13 +1,10 @@
-Polymake is a versatile framework for experimental discrete geometry.
-The standard distribution contains tool collections for the algorithmic
-treatment of polytopes and polyhedra, polyhedral surfaces,
-and finite simplicial complexes.
-It offers an unified interface to a wide variety of algorithms
-and free software packages from the computational geometry field,
-such as convex hull computation or visualization tools.
+Polymake is a versatile tool for the algorithmic treatment of
+polytopes and polyhedra.  It offers an unified interface to a wide
+variety of algorithms and free software packages from the computational
+geometry field, such as convex hull computation or visualization tools.
 
-Polymake is highly adaptable to individual needs.  In particular, it
-has a C++/perl interface which allows the user to bind his/her own
-algorithms into the common framework.
+The 2.9 series are test versions towards the "next generation" polymake.
+They introduce an interactive shell, the XML-base file format, more
+efficient C++/perl interface, and many other new features.
 
-WWW: http://www.math.tu-berlin.de/polymake/
+WWW: http://www.polymake.de/
diff --git a/math/polymake/pkg-plist b/math/polymake/pkg-plist
index 085a74040acf..37aca3d37926 100644
--- a/math/polymake/pkg-plist
+++ b/math/polymake/pkg-plist
@@ -1,1316 +1,779 @@
-libexec/polymake/Makefile.devel
-@exec sed -e 's:PREFIX=.*:PREFIX=%D:' %D/%F >%B/Makefile
-@unexec rm -f %B/Makefile
-share/polymake/apps/polytope/include/CubeFacets.h
-share/polymake/apps/polytope/include/GraphAdapter.h
-share/polymake/apps/polytope/include/HDEmbedder.h
-share/polymake/apps/polytope/include/SchlegelWindow.h
-share/polymake/apps/polytope/include/SimpleGeometryParser.h
-share/polymake/apps/polytope/include/SpringEmbedder.h
-share/polymake/apps/polytope/include/SpringEmbedderBase.h
-share/polymake/apps/polytope/include/SpringEmbedderBase.tcc
-share/polymake/apps/polytope/include/SpringEmbedderWindow.h
-share/polymake/apps/polytope/include/beneath_beyond.h
-share/polymake/apps/polytope/include/beneath_beyond.tcc
-share/polymake/apps/polytope/include/bipartite.h
-share/polymake/apps/polytope/include/bipartite.tcc
-share/polymake/apps/polytope/include/bisector.h
-share/polymake/apps/polytope/include/cdd_interface.h
-share/polymake/apps/polytope/include/cdd_interface_impl.h
-share/polymake/apps/polytope/include/ch_client.h
-share/polymake/apps/polytope/include/connected.h
-share/polymake/apps/polytope/include/connected.tcc
-share/polymake/apps/polytope/include/diameter.h
-share/polymake/apps/polytope/include/diameter.tcc
-share/polymake/apps/polytope/include/face_lattice_tools.h
-share/polymake/apps/polytope/include/graph_compare.h
-share/polymake/apps/polytope/include/hypersimplex.h
-share/polymake/apps/polytope/include/labels.h
-share/polymake/apps/polytope/include/lp_client.h
-share/polymake/apps/polytope/include/lrs_interface.h
-share/polymake/apps/polytope/include/max_cliques.h
-share/polymake/apps/polytope/include/schlegel_common.h
-share/polymake/apps/polytope/include/shortest_path_bf.h
-share/polymake/apps/polytope/include/shortest_path_common.h
-share/polymake/apps/polytope/include/shortest_path_dijkstra.h
-share/polymake/apps/polytope/include/transform.h
-share/polymake/apps/polytope/perllib/PostscriptGale.pm
-share/polymake/apps/polytope/perllib/VisualGale.pm
-share/polymake/apps/polytope/rules/azove.rules
-share/polymake/apps/polytope/rules/bastat.rules
-share/polymake/apps/polytope/rules/common.rules
-share/polymake/apps/polytope/rules/comparing.rules
-share/polymake/apps/polytope/rules/construction.rules
-share/polymake/apps/polytope/rules/flag_vector.rules
-share/polymake/apps/polytope/rules/float.rules
-share/polymake/apps/polytope/rules/framework.rules
-share/polymake/apps/polytope/rules/gale.rules
-share/polymake/apps/polytope/rules/geomview.rules
-share/polymake/apps/polytope/rules/javaview.rules
-share/polymake/apps/polytope/rules/javaview_interactive.rules
-share/polymake/apps/polytope/rules/jreality.rules
-share/polymake/apps/polytope/rules/lp.rules
-share/polymake/apps/polytope/rules/lp_float.rules
-share/polymake/apps/polytope/rules/lp_properties.rules
-share/polymake/apps/polytope/rules/lp_rational.rules
-share/polymake/apps/polytope/rules/main.rules
-share/polymake/apps/polytope/rules/plausible.rules
-share/polymake/apps/polytope/rules/polarize.rules
-share/polymake/apps/polytope/rules/polytope_properties.rules
-share/polymake/apps/polytope/rules/porta.rules
-share/polymake/apps/polytope/rules/postscript.rules
-share/polymake/apps/polytope/rules/povray.rules
-share/polymake/apps/polytope/rules/propagated_polytope.rules
-share/polymake/apps/polytope/rules/qhull.rules
-share/polymake/apps/polytope/rules/rational.rules
-share/polymake/apps/polytope/rules/schlegel.rules
-share/polymake/apps/polytope/rules/splitstree.rules
-share/polymake/apps/polytope/rules/steiner.rules
-share/polymake/apps/polytope/rules/tight_span.rules
-share/polymake/apps/polytope/rules/topcom.rules
-share/polymake/apps/polytope/rules/vinci.rules
-share/polymake/apps/polytope/rules/visual.rules
-share/polymake/apps/polytope/rules/visual_framework.rules
-share/polymake/apps/polytope/rules/visual_graph.rules
-share/polymake/apps/polytope/rules/voronoi.rules
-share/polymake/apps/surface/rules/common.rules
-share/polymake/apps/surface/rules/javaview.rules
-share/polymake/apps/surface/rules/jreality.rules
-share/polymake/apps/surface/rules/main.rules
-share/polymake/apps/surface/rules/morse_matching.rules
-share/polymake/apps/surface/rules/povray.rules
-share/polymake/apps/surface/rules/surface_properties.rules
-share/polymake/apps/surface/rules/visual.rules
-share/polymake/apps/topaz/include/1D_tools.tcc
-share/polymake/apps/topaz/include/2D_tools.tcc
-share/polymake/apps/topaz/include/3D_tools.tcc
-share/polymake/apps/topaz/include/BistellarComplex.h
-share/polymake/apps/topaz/include/ChainComplex.h
-share/polymake/apps/topaz/include/FiniteFields.h
-share/polymake/apps/topaz/include/SimplicialComplex_as_FaceMap.h
-share/polymake/apps/topaz/include/Smith_normal_form.h
-share/polymake/apps/topaz/include/barycentric_subdivision.h
-share/polymake/apps/topaz/include/complex_tools.h
-share/polymake/apps/topaz/include/complex_tools.tcc
-share/polymake/apps/topaz/include/connected_sum.h
-share/polymake/apps/topaz/include/connected_sum.tcc
-share/polymake/apps/topaz/include/is_sphere_h.h
-share/polymake/apps/topaz/include/is_sphere_h.tcc
-share/polymake/apps/topaz/include/merge_vertices.h
-share/polymake/apps/topaz/include/morse_matching_tools.h
-share/polymake/apps/topaz/include/orientation.h
-share/polymake/apps/topaz/include/orientation.tcc
-share/polymake/apps/topaz/include/read_int_args.h
-share/polymake/apps/topaz/include/read_str_args.h
-share/polymake/apps/topaz/include/read_str_args.tcc
-share/polymake/apps/topaz/include/subcomplex_tools.tcc
-share/polymake/apps/topaz/include/t_graph.h
-share/polymake/apps/topaz/include/t_graph.tcc
-share/polymake/apps/topaz/rules/common.rules
-share/polymake/apps/topaz/rules/comparing.rules
-share/polymake/apps/topaz/rules/complex_properties.rules
-share/polymake/apps/topaz/rules/construction.rules
-share/polymake/apps/topaz/rules/gap.rules
-share/polymake/apps/topaz/rules/homology.rules
-share/polymake/apps/topaz/rules/main.rules
-share/polymake/apps/topaz/rules/morse_matching.rules
-share/polymake/apps/topaz/rules/visual.rules
 bin/polymake
-%%DOCSDIR%%/about.html
-%%DOCSDIR%%/applications.html
-%%DOCSDIR%%/apply-patch.html
-%%DOCSDIR%%/apps/polytope/clients.html
-%%DOCSDIR%%/apps/polytope/images/24-cell-jv.gif
-%%DOCSDIR%%/apps/polytope/images/c45.gif
-%%DOCSDIR%%/apps/polytope/images/coord.gif
-%%DOCSDIR%%/apps/polytope/images/european-cities-bg.jpg
-%%DOCSDIR%%/apps/polytope/images/european-cities-ts.jpg
-%%DOCSDIR%%/apps/polytope/images/hyper52-t.gif
-%%DOCSDIR%%/apps/polytope/images/infinitesimal_motions_1.gif
-%%DOCSDIR%%/apps/polytope/images/laman_minus_one.gif
-%%DOCSDIR%%/apps/polytope/images/laman_minus_one_EXPANSIVE.gif
-%%DOCSDIR%%/apps/polytope/images/linear_program.gif
-%%DOCSDIR%%/apps/polytope/images/my_framework1.gif
-%%DOCSDIR%%/apps/polytope/images/random.gif
-%%DOCSDIR%%/apps/polytope/images/s3xs3.gif
-%%DOCSDIR%%/apps/polytope/images/snub-blau.gif
-%%DOCSDIR%%/apps/polytope/lib/solver.html
-%%DOCSDIR%%/apps/polytope/links.html
-%%DOCSDIR%%/apps/polytope/model.html
-%%DOCSDIR%%/apps/polytope/object_types.html
-%%DOCSDIR%%/apps/polytope/objects/FloatPolytope/object_properties.html
-%%DOCSDIR%%/apps/polytope/objects/Framework/object_methods.html
-%%DOCSDIR%%/apps/polytope/objects/Framework/object_properties.html
-%%DOCSDIR%%/apps/polytope/objects/Framework/object_tutorial.html
-%%DOCSDIR%%/apps/polytope/objects/Polytope/object_methods.html
-%%DOCSDIR%%/apps/polytope/objects/Polytope/object_properties.html
-%%DOCSDIR%%/apps/polytope/objects/PropagatedPolytope/object_properties.html
-%%DOCSDIR%%/apps/polytope/objects/RationalPolytope/object_properties.html
-%%DOCSDIR%%/apps/polytope/objects/SchlegelDiagram/object_methods.html
-%%DOCSDIR%%/apps/polytope/objects/SchlegelDiagram/object_properties.html
-%%DOCSDIR%%/apps/polytope/objects/TightSpan/object_methods.html
-%%DOCSDIR%%/apps/polytope/objects/TightSpan/object_properties.html
-%%DOCSDIR%%/apps/polytope/objects/TightSpan/object_tutorial.html
-%%DOCSDIR%%/apps/polytope/objects/Visual/Framework/visual_suppl.html
-%%DOCSDIR%%/apps/polytope/objects/Visual/Polytope/visual_suppl.html
-%%DOCSDIR%%/apps/polytope/objects/Visual/PolytopeGraph/visual_suppl.html
-%%DOCSDIR%%/apps/polytope/objects/Visual/PolytopeLattice/visual_suppl.html
-%%DOCSDIR%%/apps/polytope/objects/Visual/Schlegel/visual_suppl.html
-%%DOCSDIR%%/apps/polytope/objects/VoronoiDiagram/object_methods.html
-%%DOCSDIR%%/apps/polytope/objects/VoronoiDiagram/object_properties.html
-%%DOCSDIR%%/apps/polytope/pref_labels.html
-%%DOCSDIR%%/apps/polytope/tutorial.html
-%%DOCSDIR%%/apps/polytope/user_functions.html
-%%DOCSDIR%%/apps/polytope/utilities.html
-%%DOCSDIR%%/apps/surface/clients.html
-%%DOCSDIR%%/apps/surface/images/g5.gif
-%%DOCSDIR%%/apps/surface/images/g5_mm.gif
-%%DOCSDIR%%/apps/surface/images/g5_mm_fl.gif
-%%DOCSDIR%%/apps/surface/object_types.html
-%%DOCSDIR%%/apps/surface/objects/Surface/object_methods.html
-%%DOCSDIR%%/apps/surface/objects/Surface/object_properties.html
-%%DOCSDIR%%/apps/surface/objects/Visual/Surface/visual_suppl.html
-%%DOCSDIR%%/apps/surface/objects/Visual/SurfaceLattice/visual_suppl.html
-%%DOCSDIR%%/apps/surface/pref_labels.html
-%%DOCSDIR%%/apps/surface/samples/quad_surface.surf
-%%DOCSDIR%%/apps/surface/tutorial.html
-%%DOCSDIR%%/apps/surface/user_functions.html
-%%DOCSDIR%%/apps/surface/utilities.html
-%%DOCSDIR%%/apps/topaz/clients.html
-%%DOCSDIR%%/apps/topaz/images/kb.gif
-%%DOCSDIR%%/apps/topaz/images/mm.gif
-%%DOCSDIR%%/apps/topaz/images/morse_torus.gif
-%%DOCSDIR%%/apps/topaz/images/morse_torus.jvd
-%%DOCSDIR%%/apps/topaz/images/morse_torus.jvx
-%%DOCSDIR%%/apps/topaz/images/pile_with_boundary.gif
-%%DOCSDIR%%/apps/topaz/images/rand_sphere_poly.gif
-%%DOCSDIR%%/apps/topaz/images/rand_sphere_topaz.gif
-%%DOCSDIR%%/apps/topaz/images/rnd_knot.gif
-%%DOCSDIR%%/apps/topaz/images/sphere1.gif
-%%DOCSDIR%%/apps/topaz/images/sphere2.gif
-%%DOCSDIR%%/apps/topaz/images/subd_triang.gif
-%%DOCSDIR%%/apps/topaz/images/tetra.gif
-%%DOCSDIR%%/apps/topaz/images/torus.gif
-%%DOCSDIR%%/apps/topaz/images/trefoil.gif
-%%DOCSDIR%%/apps/topaz/images/unknot.gif
-%%DOCSDIR%%/apps/topaz/model.html
-%%DOCSDIR%%/apps/topaz/object_types.html
-%%DOCSDIR%%/apps/topaz/objects/SimplicialComplex/object_methods.html
-%%DOCSDIR%%/apps/topaz/objects/SimplicialComplex/object_properties.html
-%%DOCSDIR%%/apps/topaz/objects/Visual/SimplicialComplex/visual_suppl.html
-%%DOCSDIR%%/apps/topaz/objects/Visual/SimplicialComplexLattice/visual_suppl.html
-%%DOCSDIR%%/apps/topaz/pref_labels.html
-%%DOCSDIR%%/apps/topaz/tutorial.html
-%%DOCSDIR%%/apps/topaz/user_functions.html
-%%DOCSDIR%%/apps/topaz/utilities.html
-%%DOCSDIR%%/apps/visual_attrs.html
-%%DOCSDIR%%/calling_script.html
-%%DOCSDIR%%/client_devel.html
-%%DOCSDIR%%/copyright.html
-%%DOCSDIR%%/cover.html
-%%DOCSDIR%%/customization.html
-%%DOCSDIR%%/datafile.html
-%%DOCSDIR%%/developer_top.html
-%%DOCSDIR%%/dhtml/contents.js
-%%DOCSDIR%%/dhtml/images/collapse.gif
-%%DOCSDIR%%/dhtml/images/expand.gif
-%%DOCSDIR%%/dhtml/images/scroll_down.gif
-%%DOCSDIR%%/dhtml/images/scroll_up.gif
-%%DOCSDIR%%/dhtml/navigation.js
-%%DOCSDIR%%/dhtml/navigation_DOM.js
-%%DOCSDIR%%/dhtml/navigation_DOM_IE.js
-%%DOCSDIR%%/dhtml/recognize_browser.js
-%%DOCSDIR%%/download.html
-%%DOCSDIR%%/external.html
-%%DOCSDIR%%/full_index.html
-%%DOCSDIR%%/global.css
-%%DOCSDIR%%/help.html
-%%DOCSDIR%%/images/front.jpg
-%%DOCSDIR%%/images/front.png
-%%DOCSDIR%%/images/icon.xpm
-%%DOCSDIR%%/images/icon16.xpm
-%%DOCSDIR%%/images/new.gif
-%%DOCSDIR%%/images/polymake-150.gif
-%%DOCSDIR%%/images/polymake.gif
-%%DOCSDIR%%/images/polymake.ico
-%%DOCSDIR%%/index.html
-%%DOCSDIR%%/install-full.html
-%%DOCSDIR%%/install-port.html
-%%DOCSDIR%%/install-rpm.html
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+%%DATADIR%%/xml/documentation/entities/xhtml-symbol.ent
+%%DATADIR%%/xml/documentation/functions.js
+%%DATADIR%%/xml/documentation/images/doclogo.png
+%%DATADIR%%/xml/documentation/images/minus.png
+%%DATADIR%%/xml/documentation/images/plus.png
+%%DATADIR%%/xml/documentation/images/tocdot2.png
+%%DATADIR%%/xml/documentation/index.xsl
+%%DATADIR%%/xml/documentation/macros.xsl
+%%DATADIR%%/xml/trivial-copy.xslt
+%%DATADIR%%/xml/upgrade-2.9.7.xslt
+%%DATADIR%%/xml/upgrade-2.9.8.xslt
+libexec/polymake/perlx/%%PERL_VERSION%%/%%PERL_REAL_ARCH%%/auto/Polymake/Ext/.packlist
+libexec/polymake/perlx/%%PERL_VERSION%%/%%PERL_REAL_ARCH%%/auto/Polymake/Ext/Ext.bs
+libexec/polymake/perlx/%%PERL_VERSION%%/%%PERL_REAL_ARCH%%/auto/Polymake/Ext/Ext.so
+@dirrm libexec/polymake/perlx/%%PERL_VERSION%%/%%PERL_REAL_ARCH%%/auto/Polymake/Ext
+@dirrm libexec/polymake/perlx/%%PERL_VERSION%%/%%PERL_REAL_ARCH%%/auto/Polymake
 @dirrm libexec/polymake/perlx/%%PERL_VERSION%%/%%PERL_REAL_ARCH%%/auto
 @dirrm libexec/polymake/perlx/%%PERL_VERSION%%/%%PERL_REAL_ARCH%%
 @dirrm libexec/polymake/perlx/%%PERL_VERSION%%
-@dirrm share/polymake/support
-@dirrm share/polymake/scripts
-@dirrm share/polymake/povray
+@dirrm %%DATADIR%%/xml/documentation/images
+@dirrm %%DATADIR%%/xml/documentation/entities
+@dirrm %%DATADIR%%/xml/documentation
+@dirrm %%DATADIR%%/xml
+@dirrm %%DATADIR%%/support
+@dirrm %%DATADIR%%/scripts
+@dirrm %%DATADIR%%/povray
+@dirrm %%DATADIR%%/perllib/Polymake/Core
+@dirrm %%DATADIR%%/perllib/Polymake
+@dirrm %%DATADIR%%/perllib
+@dirrm %%DATADIR%%/lib/PTL/skel
+@dirrm %%DATADIR%%/lib/PTL/include/std/bits
+@dirrm %%DATADIR%%/lib/PTL/include/std
+@dirrm %%DATADIR%%/lib/PTL/include/perl
+@dirrm %%DATADIR%%/lib/PTL/include
+@dirrm %%DATADIR%%/lib/PTL
+@dirrm %%DATADIR%%/lib
+@dirrm %%DATADIR%%/java_build/jreality/lib
+@dirrm %%DATADIR%%/java_build/jreality
+@dirrm %%DATADIR%%/java_build/jni
+@dirrm %%DATADIR%%/java_build
+@dirrm %%DATADIR%%/apps/tropical/src
+@exec mkdir -p %D/%%DATADIR%%/apps/tropical/scripts
+@dirrm %%DATADIR%%/apps/tropical/scripts
+@dirrm %%DATADIR%%/apps/tropical/rules
+@dirrm %%DATADIR%%/apps/tropical/include
+@dirrm %%DATADIR%%/apps/tropical
+@dirrm %%DATADIR%%/apps/topaz/src
+@dirrm %%DATADIR%%/apps/topaz/scripts
+@dirrm %%DATADIR%%/apps/topaz/rules
+@dirrm %%DATADIR%%/apps/topaz/include
+@dirrm %%DATADIR%%/apps/topaz
+@dirrm %%DATADIR%%/apps/polytope/src
+@dirrm %%DATADIR%%/apps/polytope/scripts
+@dirrm %%DATADIR%%/apps/polytope/rules
+@dirrm %%DATADIR%%/apps/polytope/perllib
+@dirrm %%DATADIR%%/apps/polytope/include
+@dirrm %%DATADIR%%/apps/polytope
+@dirrm %%DATADIR%%/apps/matroid/src
+@dirrm %%DATADIR%%/apps/matroid/rules
+@dirrm %%DATADIR%%/apps/matroid/include
+@dirrm %%DATADIR%%/apps/matroid
+@dirrm %%DATADIR%%/apps/graph/src
+@dirrm %%DATADIR%%/apps/graph/rules
+@dirrm %%DATADIR%%/apps/graph/perllib/Visual
+@dirrm %%DATADIR%%/apps/graph/perllib
+@dirrm %%DATADIR%%/apps/graph/include
+@dirrm %%DATADIR%%/apps/graph
+@dirrm %%DATADIR%%/apps/common/src/native
+@dirrm %%DATADIR%%/apps/common/src
+@exec mkdir -p %D/%%DATADIR%%/apps/common/scripts
+@dirrm %%DATADIR%%/apps/common/scripts
+@dirrm %%DATADIR%%/apps/common/rules
+@dirrm %%DATADIR%%/apps/common/perllib/Visual
+@dirrm %%DATADIR%%/apps/common/perllib
+@dirrm %%DATADIR%%/apps/common/include/perl/bindings
+@dirrm %%DATADIR%%/apps/common/include/perl
+@dirrm %%DATADIR%%/apps/common/include
+@dirrm %%DATADIR%%/apps/common
+@dirrm %%DATADIR%%/apps
+@dirrm %%DATADIR%%
+%%PORTDOCS%%@dirrm %%DOCSDIR%%/images
+%%PORTDOCS%%@dirrm %%DOCSDIR%%
 @dirrm libexec/polymake/perlx
-@dirrm share/polymake/perl/Poly
-@dirrm share/polymake/perl
-@dirrm share/polymake/modules/graph/rules
-@dirrm share/polymake/modules/graph/perllib
-@dirrm libexec/polymake/modules/graph/bin
-@dirrm libexec/polymake/modules/graph
-@dirrm share/polymake/modules/graph
-@dirrm share/polymake/modules/common/rules
-@dirrm share/polymake/modules/common/perllib
-@dirrm libexec/polymake/modules/common/bin
-@dirrm libexec/polymake/modules/common
-@dirrm share/polymake/modules/common
-@dirrm libexec/polymake/modules
-@dirrm share/polymake/modules
-@dirrm share/polymake/lib/poly_client/include
-@dirrm share/polymake/lib/poly_client
-@dirrm share/polymake/lib/gmp_wrapper/include
-@dirrm share/polymake/lib/gmp_wrapper
-@dirrm share/polymake/lib/PTL/include/std/ext
-@dirrm share/polymake/lib/PTL/include/std/bits
-@dirrm share/polymake/lib/PTL/include/std
-@dirrm share/polymake/lib/PTL/include/ports
-@dirrm share/polymake/lib/PTL/include
-@dirrm share/polymake/lib/PTL
+@dirrm libexec/polymake/lib/jni
 @dirrm libexec/polymake/lib
-@dirrm share/polymake/lib
-@dirrm share/polymake/jars
-@dirrm %%DOCSDIR%%/perl
-@dirrm %%DOCSDIR%%/lib
-@dirrm %%DOCSDIR%%/images
-@dirrm %%DOCSDIR%%/dhtml/images
-@dirrm %%DOCSDIR%%/dhtml
-@dirrm %%DOCSDIR%%/apps/topaz/objects/Visual/SimplicialComplexLattice
-@dirrm %%DOCSDIR%%/apps/topaz/objects/Visual/SimplicialComplex
-@dirrm %%DOCSDIR%%/apps/topaz/objects/Visual
-@dirrm %%DOCSDIR%%/apps/topaz/objects/SimplicialComplex
-@dirrm %%DOCSDIR%%/apps/topaz/objects
-@dirrm %%DOCSDIR%%/apps/topaz/images
-@dirrm %%DOCSDIR%%/apps/topaz
-@dirrm %%DOCSDIR%%/apps/surface/samples
-@dirrm %%DOCSDIR%%/apps/surface/objects/Visual/SurfaceLattice
-@dirrm %%DOCSDIR%%/apps/surface/objects/Visual/Surface
-@dirrm %%DOCSDIR%%/apps/surface/objects/Visual
-@dirrm %%DOCSDIR%%/apps/surface/objects/Surface
-@dirrm %%DOCSDIR%%/apps/surface/objects
-@dirrm %%DOCSDIR%%/apps/surface/images
-@dirrm %%DOCSDIR%%/apps/surface
-@dirrm %%DOCSDIR%%/apps/polytope/objects/VoronoiDiagram
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Visual/Schlegel
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Visual/PolytopeLattice
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Visual/PolytopeGraph
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Visual/Polytope
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Visual/Framework
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Visual
-@dirrm %%DOCSDIR%%/apps/polytope/objects/TightSpan
-@dirrm %%DOCSDIR%%/apps/polytope/objects/SchlegelDiagram
-@dirrm %%DOCSDIR%%/apps/polytope/objects/RationalPolytope
-@dirrm %%DOCSDIR%%/apps/polytope/objects/PropagatedPolytope
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Polytope
-@dirrm %%DOCSDIR%%/apps/polytope/objects/Framework
-@dirrm %%DOCSDIR%%/apps/polytope/objects/FloatPolytope
-@dirrm %%DOCSDIR%%/apps/polytope/objects
-@dirrm %%DOCSDIR%%/apps/polytope/lib
-@dirrm %%DOCSDIR%%/apps/polytope/images
-@dirrm %%DOCSDIR%%/apps/polytope
-@dirrm %%DOCSDIR%%/apps
-@dirrm %%DOCSDIR%%
-@dirrm share/polymake/apps/topaz/rules
-@dirrm share/polymake/apps/topaz/include
-@dirrm libexec/polymake/apps/topaz/bin
-@dirrm libexec/polymake/apps/topaz
-@dirrm share/polymake/apps/topaz
-@dirrm share/polymake/apps/surface/scripts
-@dirrm share/polymake/apps/surface/rules
-@dirrm libexec/polymake/apps/surface/bin
-@dirrm libexec/polymake/apps/surface
-@dirrm share/polymake/apps/surface
-@dirrm share/polymake/apps/polytope/scripts
-@dirrm share/polymake/apps/polytope/rules
-@dirrm share/polymake/apps/polytope/perllib
-@dirrm share/polymake/apps/polytope/include
-@dirrm libexec/polymake/apps/polytope/bin
-@dirrm libexec/polymake/apps/polytope
-@dirrm share/polymake/apps/polytope
-@dirrm libexec/polymake/apps
-@dirrm share/polymake/apps
 @dirrm libexec/polymake
-@dirrm share/polymake