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authorbapt <bapt@FreeBSD.org>2014-09-02 05:25:59 +0800
committerbapt <bapt@FreeBSD.org>2014-09-02 05:25:59 +0800
commit6e9472cb35f269c5f204f2ca91cfa6f948ae1c9b (patch)
tree7842527232644d8f0fc76639a38e9596a910d381 /math
parent9527ab32aec3b257dbaaeebb104c2507ee5b519a (diff)
downloadfreebsd-ports-gnome-6e9472cb35f269c5f204f2ca91cfa6f948ae1c9b.tar.gz
freebsd-ports-gnome-6e9472cb35f269c5f204f2ca91cfa6f948ae1c9b.tar.zst
freebsd-ports-gnome-6e9472cb35f269c5f204f2ca91cfa6f948ae1c9b.zip
Remove non staged ports without pending PR from ma*
Diffstat (limited to 'math')
-rw-r--r--math/Makefile14
-rw-r--r--math/atlas-devel/Makefile265
-rw-r--r--math/atlas-devel/distinfo2
-rw-r--r--math/atlas-devel/files/Makefile.test35
-rw-r--r--math/atlas-devel/files/alpha-patch9
-rw-r--r--math/atlas-devel/files/patch-CONFIG+src+SpewMakeInc.c20
-rw-r--r--math/atlas-devel/files/patch-CONFIG+src+atlcomp.txt121
-rw-r--r--math/atlas-devel/files/patch-CONFIG+src+backend+archinfo_freebsd.c76
-rw-r--r--math/atlas-devel/files/patch-tune+sysinfo+L1CacheSize.c20
-rw-r--r--math/atlas-devel/files/thread-patch12
-rw-r--r--math/atlas-devel/pkg-descr18
-rw-r--r--math/atlas-devel/pkg-plist50
-rw-r--r--math/bihar/Makefile61
-rw-r--r--math/bihar/distinfo286
-rw-r--r--math/bihar/files/makefile.lib42
-rw-r--r--math/bihar/pkg-descr21
-rw-r--r--math/bihar/pkg-plist3
-rw-r--r--math/itl/Makefile32
-rw-r--r--math/itl/distinfo2
-rw-r--r--math/itl/files/patch-test+iohb_c10
-rw-r--r--math/itl/files/patch-test+mmio_c11
-rw-r--r--math/itl/pkg-descr15
-rw-r--r--math/itl/pkg-plist11
-rw-r--r--math/javanns/Makefile46
-rw-r--r--math/javanns/distinfo2
-rw-r--r--math/javanns/files/javanns.sh2
-rw-r--r--math/javanns/pkg-descr5
-rw-r--r--math/javanns/pkg-plist189
-rw-r--r--math/javaview/Makefile60
-rw-r--r--math/javaview/distinfo6
-rw-r--r--math/javaview/files/patch-bin-javaview23
-rw-r--r--math/javaview/files/pkg-message.in15
-rw-r--r--math/javaview/pkg-descr7
-rw-r--r--math/javaview/pkg-plist675
-rw-r--r--math/jsmath-fonts-sprite/Makefile32
-rw-r--r--math/jsmath-fonts-sprite/distinfo2
-rw-r--r--math/jsmath-fonts-sprite/pkg-descr4
-rw-r--r--math/jsmath-fonts-sprite/pkg-plist184
-rw-r--r--math/jsmath/Makefile40
-rw-r--r--math/jsmath/distinfo2
-rw-r--r--math/jsmath/pkg-descr16
-rw-r--r--math/jsmath/pkg-plist66
-rw-r--r--math/kash3/Makefile70
-rw-r--r--math/kash3/distinfo4
-rw-r--r--math/kash3/files/kash3.in4
-rw-r--r--math/kash3/pkg-descr17
-rw-r--r--math/kash3/pkg-plist5097
-rw-r--r--math/matrix/Makefile26
-rw-r--r--math/matrix/distinfo2
-rw-r--r--math/matrix/pkg-descr4
-rw-r--r--math/matrix/pkg-plist6
-rw-r--r--math/mprime/Makefile36
-rw-r--r--math/mprime/distinfo2
-rw-r--r--math/mprime/files/pkg-message.in10
-rw-r--r--math/mprime/files/wrapper.sh.in23
-rw-r--r--math/mprime/pkg-descr15
-rw-r--r--math/mprime/pkg-plist8
-rw-r--r--math/petsc/Makefile303
-rw-r--r--math/petsc/distinfo2
-rw-r--r--math/petsc/files/patch-bmake__common__rules.shared.basic13
-rw-r--r--math/petsc/files/patch-config_configure.py11
-rw-r--r--math/petsc/files/patch-makefile40
-rw-r--r--math/petsc/files/patch-python_PETSc_packages_spooles.py12
-rw-r--r--math/petsc/files/patch-src__mat__impls__aij__seq__umfpack__umfpack.c34
-rw-r--r--math/petsc/files/patch-src__mat__impls__rowbs__mpi__mpirowbs.h13
-rw-r--r--math/petsc/files/pkg-message.in5
-rw-r--r--math/petsc/pkg-descr9
-rw-r--r--math/petsc/pkg-plist282
-rw-r--r--math/sdpa-gmp/Makefile46
-rw-r--r--math/sdpa-gmp/distinfo4
-rw-r--r--math/sdpa-gmp/pkg-descr10
-rw-r--r--math/sdpa-gmp/pkg-plist5
-rw-r--r--math/sedumi/Makefile49
-rw-r--r--math/sedumi/distinfo2
-rw-r--r--math/sedumi/files/patch-and_or318
-rw-r--r--math/sedumi/files/patch-posttransfo.m11
-rw-r--r--math/sedumi/files/patch-string.h40
-rw-r--r--math/sedumi/pkg-descr5
-rw-r--r--math/sedumi/pkg-plist154
-rw-r--r--math/unixstat/Makefile53
-rw-r--r--math/unixstat/distinfo2
-rw-r--r--math/unixstat/files/patch-Makefile20
-rw-r--r--math/unixstat/files/patch-src82
-rw-r--r--math/unixstat/pkg-descr16
-rw-r--r--math/unixstat/pkg-plist59
85 files changed, 0 insertions, 9436 deletions
diff --git a/math/Makefile b/math/Makefile
index 3e3e1d25df93..39ca2f119393 100644
--- a/math/Makefile
+++ b/math/Makefile
@@ -63,11 +63,9 @@
SUBDIR += aspcud
SUBDIR += asymptote
SUBDIR += atlas
- SUBDIR += atlas-devel
SUBDIR += bamg
SUBDIR += bargraph
SUBDIR += biggles
- SUBDIR += bihar
SUBDIR += blacs
SUBDIR += blas
SUBDIR += blitz++
@@ -187,23 +185,17 @@
SUBDIR += ipopt
SUBDIR += isabelle
SUBDIR += ised
- SUBDIR += itl
SUBDIR += jacal
SUBDIR += jags
SUBDIR += jakarta-commons-math
SUBDIR += jakarta-commons-math3
SUBDIR += jama
- SUBDIR += javanns
- SUBDIR += javaview
SUBDIR += jeuclid
SUBDIR += jlatexmath
- SUBDIR += jsmath
SUBDIR += jsmath-fonts
- SUBDIR += jsmath-fonts-sprite
SUBDIR += jtransforms
SUBDIR += jts
SUBDIR += kalgebra
- SUBDIR += kash3
SUBDIR += kbruch
SUBDIR += kcalc
SUBDIR += kig
@@ -242,7 +234,6 @@
SUBDIR += mathomatic
SUBDIR += matio
SUBDIR += matlab-installer
- SUBDIR += matrix
SUBDIR += maxima
SUBDIR += mbasecalc
SUBDIR += metis
@@ -256,7 +247,6 @@
SUBDIR += mpexpr
SUBDIR += mpfr
SUBDIR += mpir
- SUBDIR += mprime
SUBDIR += msieve
SUBDIR += mtl
SUBDIR += mtrxmath
@@ -523,7 +513,6 @@
SUBDIR += pecl-bitset
SUBDIR += pecl-stats
SUBDIR += pecl-trader
- SUBDIR += petsc
SUBDIR += php5-bcmath
SUBDIR += php5-gmp
SUBDIR += php53-bcmath
@@ -622,9 +611,7 @@
SUBDIR += scilab-toolbox-sivp
SUBDIR += scilab-toolbox-swt
SUBDIR += sdpa
- SUBDIR += sdpa-gmp
SUBDIR += sdpara
- SUBDIR += sedumi
SUBDIR += sfft
SUBDIR += sfst
SUBDIR += simd-viterbi
@@ -656,7 +643,6 @@
SUBDIR += ufc
SUBDIR += ump
SUBDIR += units
- SUBDIR += unixstat
SUBDIR += unuran
SUBDIR += vtk5
SUBDIR += vtk5-data
diff --git a/math/atlas-devel/Makefile b/math/atlas-devel/Makefile
deleted file mode 100644
index 29ab29a710b0..000000000000
--- a/math/atlas-devel/Makefile
+++ /dev/null
@@ -1,265 +0,0 @@
-# Created by: Nakata Maho <maho@FreeBSD.org>
-# $FreeBSD$
-
-PORTNAME= atlas
-PORTVERSION= 3.9.11
-PORTREVISION= 3
-CATEGORIES= math
-MASTER_SITES= SF/math-${PORTNAME}/Developer%20%28unstable%29/${PORTVERSION}
-PKGNAMESUFFIX= -devel
-DISTNAME= ${PORTNAME}${PORTVERSION}
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Development version of math/atlas
-
-IGNORE= : dependent ports have been altered to link with math/atlas -- please\
-use that port instead of math/atlas-devel, while the latter is being revised
-MANUAL_PACKAGE_BUILD= Optimizes for the local machine.
-
-USES= fortran gmake tar:bzip2
-USE_GCC= yes
-WRKSRC= ${WRKDIR}/ATLAS
-USE_LDCONFIG= yes
-CONFLICTS= atlas-[0-9]* cblas-[0-9]*
-
-NO_STAGE= yes
-.include <bsd.port.pre.mk>
-
-NOT_FOR_ARCHS= alpha
-
-CCOMPILER= ${CC}
-LIB_DEPENDS+= libblas.so:${PORTSDIR}/math/blas
-LIB_DEPENDS+= liblapack.so:${PORTSDIR}/math/lapack
-
-.if ${ARCH} == "sparc64"
-PICFLAG?= -fPIC
-.else
-PICFLAG?= -fpic
-.endif
-
-.if ${ARCH} == "i386"
-POINTER= 32
-.endif
-.if ${ARCH} == "amd64"
-POINTER= 64
-.endif
-.if ${ARCH} == "sparc64"
-POINTER= 64
-.endif
-
-.if (${OSVERSION} < 700000) && defined(WITH_GCC42KERNEL)
-BUILD_DEPENDS+= gcc42:${PORTSDIR}/lang/gcc42
-KERNELFLAG= -Ss kern gcc42
-.else
-KERNELFLAG= ""
-.endif
-
-.if defined(WITH_WALL_TIMER)
-. if defined(MHZ) && ( ${ARCH} == "i386" || ${ARCH} == "amd64" )
-TIMEFLAG= -D c -DPentiumCPS=${MHZ}
-. else
-TIMEFLAG= -D c -DWALL
-. endif
-.else
-TIMEFLAG= ""
-.endif
-
-# only used for lapack sub-project
-.if defined(WITH_OPTIMIZED_FLAGS)
-.if defined(CPUTYPE)
-FFLAGS+= -march=${CPUTYPE} -pipe -O2 -ffast-math
-.else
-FFLAGS+= -pipe -O2 -ffast-math
-.endif
-.endif
-.if defined(WITH_STATICLIB)
-PLIST_SUB+= WITH_STATICLIB=""
-.else
-PLIST_SUB+= WITH_STATICLIB="@comment "
-.endif
-
-post-extract:
- @${ECHO_MSG} 'This port engages in a long, computationally-demanding tuning process.'
- @${ECHO_MSG} 'Builds can take a day or more on older hardware, and temporarily occupy'
- @${ECHO_MSG} 'several hundred megabytes of disk space. You are advised to disable'
- @${ECHO_MSG} 'all forms of power management or CPU throttling (APM, ACPI, Intel'
- @${ECHO_MSG} 'SpeedStep, AMD PowerNow, AMD Cool and Quiet, p4tcc, powerd, etc.)'
- @${ECHO_MSG} 'that may change the disk I/O or CPU behavior during the build, and'
- @${ECHO_MSG} 'to set operating parameters to static values at which you ultimately'
- @${ECHO_MSG} 'intend to use the software. You should also avoid placing heavy loads'
- @${ECHO_MSG} 'on the system during the build, and temporarily disable any automatons'
- @${ECHO_MSG} 'that may do so. If you fail to follow these guidelines, you may prolong'
- @${ECHO_MSG} 'the build, perhaps indefinitely, and you may obtain libraries with'
- @${ECHO_MSG} 'sub-optimal performance.'
- @${ECHO_MSG}
- @${ECHO_MSG} 'Occasionally the autoconfiguration may fail for certain platforms, and'
- @${ECHO_MSG} 'you may have to override the architecture, compiler flags, assembly'
- @${ECHO_MSG} 'language dialect, or pointer bit-width by issuing additional configure'
- @${ECHO_MSG} 'arguments. Consult the FAQ, installation guide, and errata page at'
- @${ECHO_MSG} 'the project website for help if this is necessary, and notify the'
- @${ECHO_MSG} 'port maintainer.'
- @${ECHO_MSG}
- @${ECHO_MSG} "This port purposely ignores the CC and CFLAGS settings"
- @${ECHO_MSG} "Program and compiler flags are fine-tuned to the gcc 4.2.x"
- @${ECHO_MSG} "compiler, although other gcc versions may be used; gcc 4.1.x"
- @${ECHO_MSG} "is NOT recommended"
- @${ECHO_MSG}
-.if !defined(WITH_STATICLIB)
- @${ECHO_MSG} "You can build static libraries with"
- @${ECHO_MSG} "make -DWITH_STATICLIB"
- @${ECHO_MSG}
-.endif
-.if !defined(WITH_WALL_TIMER)
- @${ECHO_MSG} "If your machine will be solely dedicated to"
- @${ECHO_MSG} "building atlas with gcc during the lengthy optimization"
- @${ECHO_MSG} "process, and not subjected to other loads, you"
- @${ECHO_MSG} "may enable the more accurate wall timer (instead of"
- @${ECHO_MSG} "the default CPU-time timer) with make -DWITH_WALL_TIMER"
- @${ECHO_MSG} "If, in addition, you are on i386 or amd64, you may set MHZ"
- @${ECHO_MSG} "to your CPU clock frequency in MHz (rounded to the nearest"
- @${ECHO_MSG} "integer value) in the build environment for cycle-to-time"
- @${ECHO_MSG} "conversion"
- @${ECHO_MSG}
-.endif
-.if (${OSVERSION} < 700000)
-.if !defined(WITH_GCC42KERNEL)
- @${ECHO_MSG} "If you don't want to make gcc 4.2.x your default compiler (CC),"
- @${ECHO_MSG} "but you want to have ATLAS use it to compile all the kernel"
- @${ECHO_MSG} "routines (this usually results in superior performance, and a"
- @${ECHO_MSG} "slightly faster build), while compiling interface routines and"
- @${ECHO_MSG} "doing any linking with gcc 3.x, make a hybrid build with"
- @${ECHO_MSG} "make -DWITH_GCC42KERNEL"
- @${ECHO_MSG}
-.endif
-.endif
-
-pre-configure:
- @${REINPLACE_CMD} -e "s|%%CC%%|${CCOMPILER}|g" \
- -e "s|%%FC%%|${FC}|g" ${WRKSRC}/CONFIG/src/atlcomp.txt
- @${REINPLACE_CMD} -e "s|%%PTHREAD_LIBS%%|${PTHREAD_LIBS}|g" \
- -e "s|%%PTHREAD_CFLAGS%%|${PTHREAD_CFLAGS}|g" \
- -e "s|%%LOCALBASE%%|${LOCALBASE}|g" \
- ${WRKSRC}/CONFIG/src/SpewMakeInc.c
-
-do-configure:
-#non-threaded
-#dummy f77lib, it is not used.
- ${MKDIR} ${WRKSRC}/NON_THREADED ; cd ${WRKSRC}/NON_THREADED ; \
- ../configure -v 2 -t 0 ${TIMEFLAG} -b ${POINTER} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
- ${MKDIR} ${WRKSRC}/NON_THREADED_PIC ; cd ${WRKSRC}/NON_THREADED_PIC ; \
- ../configure -v 2 -t 0 -b ${POINTER} -Fa alg '${PICFLAG} -DPIC' ${TIMEFLAG} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
-#threaded
-#dummy f77lib, it is not used.
- cd ${WRKSRC}; ${PATCH} < ${FILESDIR}/thread-patch
- ${MKDIR} ${WRKSRC}/THREADED ; cd ${WRKSRC}/THREADED ; \
- ../configure -v 2 -b ${POINTER} -Fa alg '${PTHREAD_CFLAGS} ' ${TIMEFLAG} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
- ${MKDIR} ${WRKSRC}/THREADED_PIC ; cd ${WRKSRC}/THREADED_PIC ; \
- ../configure -v 2 -b ${POINTER} -Fa alg '${PTHREAD_CFLAGS} ${PICFLAG} -DPIC' ${TIMEFLAG} -Si cputhrchk 0 ${KERNELFLAG} -Ss f77lib " "
-
-do-build:
-# make lapack
-.if ! exists(${WRKDIR}/lapack/Makefile)
- @${ECHO_MSG} "===> Extracting lapack sub project"
- @${MKDIR} ${WRKDIR}/lapack
- @${CP} -r ${PORTSDIR}/math/lapack/files ${WRKDIR}/lapack
- @${CP} ${PORTSDIR}/math/lapack/Makefile ${WRKDIR}/lapack
- @${CP} ${PORTSDIR}/math/lapack/distinfo ${WRKDIR}/lapack
- @${CP} ${PORTSDIR}/math/lapack/pkg-descr ${WRKDIR}/lapack
- @cd ${WRKDIR}/lapack ; ${MAKE} "FFLAGS=${FFLAGS}" FC="${FC}" build WRKDIRPREFIX=""
-.endif
-.if defined(WITH_STATICLIB)
- (cd ${WRKSRC}/NON_THREADED ; ${MAKE})
- (cd ${WRKSRC}/THREADED ; ${MAKE})
-.endif
- (cd ${WRKSRC}/NON_THREADED_PIC ; ${MAKE})
- (cd ${WRKSRC}/THREADED_PIC ; ${MAKE})
-test:
- @${MAKE} do-test
-
-ATLAS_LIBS1=libalapack libatlas libcblas libf77blas #libtstatlas
-ATLAS_LIBS2=libptcblas libptf77blas
-LAPACKWRKSRC=`cd ${WRKDIR}/lapack; ${MAKE} -V WRKSRC WRKDIRPREFIX=""`
-
-post-build:
-.if defined(WITH_STATICLIB)
-# make atlas-enhanced lapack (static ver)
- (cd ${WRKSRC}; ${MKDIR} tmp1 ; \
- ${CP} ${LAPACKWRKSRC}/liblapack.a tmp1 ;\
- cd tmp1 ;\
- ar x liblapack.a ;\
- ar x ../NON_THREADED/lib/liblapack.a ;\
- ar r ../NON_THREADED/lib/libalapack.a *.o ;\
- ranlib ../NON_THREADED/lib/libalapack.a )
-# make atlas-enhanced lapack (static and thread-safe ver)
- (cd ${WRKSRC}; ${MKDIR} tmp2 ; \
- ${CP} ${LAPACKWRKSRC}/liblapack.a tmp2 ;\
- cd tmp2 ;\
- ar x liblapack.a ;\
- ar x ../THREADED/lib/liblapack.a ;\
- ar r ../THREADED/lib/libalapack.a *.o ;\
- ranlib ../THREADED/lib/libalapack.a )
-.endif
-# make atlas-enhanced lapack (shared ver)
- ( cd ${WRKSRC}; ${MKDIR} tmp3 ;\
- ${CP} ${LAPACKWRKSRC}_shared/liblapack.a tmp3 ;\
- cd tmp3 ;\
- ar x liblapack.a ;\
- ar x ../NON_THREADED_PIC/lib/liblapack.a ;\
- ar r ../NON_THREADED_PIC/lib/libalapack.a *.o ;\
- ranlib ../NON_THREADED_PIC/lib/libalapack.a )
-# make atlas-enhanced lapack (shared and thread-safe ver)
- ( cd ${WRKSRC}; ${MKDIR} tmp4 ;\
- ${CP} ${LAPACKWRKSRC}_shared/liblapack.a tmp4 ;\
- cd tmp4 ;\
- ar x liblapack.a ;\
- ar x ../THREADED_PIC/lib/liblapack.a ;\
- ar r ../THREADED_PIC/lib/libalapack.a *.o ;\
- ranlib ../THREADED_PIC/lib/libalapack.a )
-
-# make atlas shared library
-.for i in ${ATLAS_LIBS1}
- ( cd ${WRKSRC}/NON_THREADED_PIC/lib ; \
- ld -Bshareable -o ${i}.so.2 -x -soname ${i}.so.2 --whole-archive ${i}.a )
-.endfor
-
-# make atlas shared (thread-safe) library
-.for i in ${ATLAS_LIBS1}
- ( cd ${WRKSRC}/THREADED_PIC/lib ; \
- ld -Bshareable -o ${i}_r.so.2 -x -soname ${i}_r.so.2 --whole-archive ${i}.a )
-.endfor
-.for i in ${ATLAS_LIBS2}
- ( cd ${WRKSRC}/THREADED_PIC/lib ; \
- ld -Bshareable -o ${i}.so.2 -x -soname ${i}.so.2 --whole-archive ${i}.a )
-.endfor
-do-install:
-.for i in ${ATLAS_LIBS1}
-.if defined(WITH_STATICLIB)
- @${INSTALL_DATA} ${WRKSRC}/NON_THREADED/lib/${i}.a ${PREFIX}/lib
-.endif
- @${INSTALL_DATA} ${WRKSRC}/NON_THREADED_PIC/lib/${i}.so.2 ${PREFIX}/lib
- @${LN} -sf ${i}.so.2 ${PREFIX}/lib/${i}.so
-.endfor
-.for i in ${ATLAS_LIBS1}
-.if defined(WITH_STATICLIB)
- @${INSTALL_DATA} ${WRKSRC}/THREADED/lib/${i}.a ${PREFIX}/lib/${i}_r.a
-.endif
- @${INSTALL_DATA} ${WRKSRC}/THREADED_PIC/lib/${i}_r.so.2 ${PREFIX}/lib/${i}_r.so.2
- @${LN} -sf ${i}_r.so.2 ${PREFIX}/lib/${i}_r.so
-.endfor
-.for i in ${ATLAS_LIBS2}
-.if defined(WITH_STATICLIB)
- @${INSTALL_DATA} ${WRKSRC}/THREADED/lib/${i}.a ${PREFIX}/lib
-.endif
- @${INSTALL_DATA} ${WRKSRC}/THREADED_PIC/lib/${i}.so.2 ${PREFIX}/lib
- @${LN} -sf ${i}.so.2 ${PREFIX}/lib/${i}.so
-.endfor
-
- @${INSTALL_DATA} ${WRKSRC}/include/cblas.h ${PREFIX}/include
- @${INSTALL_DATA} ${WRKSRC}/include/clapack.h ${PREFIX}/include
-.if !defined(NOPORTDOCS)
- @${MKDIR} ${DOCSDIR}
- ${INSTALL_DATA} ${WRKSRC}/doc/* ${DOCSDIR}
-.endif
-
-.include <${FILESDIR}/Makefile.test>
-.include <bsd.port.post.mk>
diff --git a/math/atlas-devel/distinfo b/math/atlas-devel/distinfo
deleted file mode 100644
index 64e8d5306082..000000000000
--- a/math/atlas-devel/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (atlas3.9.11.tar.bz2) = d91e593a772cf540ff693f7d8c43d10c3037eb334c5c77572ea1b6a64a0b9677
-SIZE (atlas3.9.11.tar.bz2) = 4699100
diff --git a/math/atlas-devel/files/Makefile.test b/math/atlas-devel/files/Makefile.test
deleted file mode 100644
index 1eaae571f323..000000000000
--- a/math/atlas-devel/files/Makefile.test
+++ /dev/null
@@ -1,35 +0,0 @@
-ALLTESTS = xsl3blastst xdl3blastst xcl3blastst xzl3blastst \
- xsl2blastst xdl2blastst xcl2blastst xzl2blastst \
- xsl1blastst xdl1blastst xcl1blastst xzl1blastst \
- xslutst xslutstF xdlutst xdlutstF xclutst xclutstF \
- xzlutst xzlutstF xsllttst xsllttstF xdllttst xdllttstF \
- xcllttst xcllttstF xzllttst xzllttstF
-
-ALLTESTS_PT = xsl3blastst_pt xdl3blastst_pt xcl3blastst_pt xzl3blastst_pt \
- xslutst_pt xslutstF_pt xdlutst_pt xdlutstF_pt xclutst_pt xclutstF_pt \
- xzlutst_pt xzlutstF_pt xsllttst_pt xsllttstF_pt xdllttst_pt \
- xdllttstF_pt xcllttst_pt xcllttstF_pt xzllttst_pt xzllttstF_pt
-#build errors?
-# xsl2blastst_pt xdl2blastst_pt xcl2blastst_pt xzl2blastst_pt \
-# xsl1blastst_pt xdl1blastst_pt xcl1blastst_pt xzl1blastst_pt \
-#Failed tests
-do-test:
- @for i in ${ALLTESTS} ; do \
- ${ECHO_CMD} "Making $${i}" ; \
- cd ${WRKDIR}/ATLAS/NON_THREADED_PIC/bin ; ${MAKE} $${i} ; \
- done
- @for i in ${ALLTESTS_PT} ; do \
- ${ECHO_CMD} "Making $${i}" ; \
- cd ${WRKDIR}/ATLAS/THREADED_PIC/bin ; ${MAKE} $${i} ; \
- done
- @for i in ${ALLTESTS} ; do \
- ${ECHO_CMD} "Benchmarking $${i}" ; \
- cd ${WRKDIR}/ATLAS/NON_THREADED_PIC/bin ; ./$${i} ; \
- done
- @for i in ${ALLTESTS_PT} ; do \
- ${ECHO_CMD} "Benchmarking $${i}" ; \
- cd ${WRKDIR}/ATLAS/THREADED_PIC/bin ; ./$${i} ; \
- done
-
-
-
diff --git a/math/atlas-devel/files/alpha-patch b/math/atlas-devel/files/alpha-patch
deleted file mode 100644
index 564198d5be91..000000000000
--- a/math/atlas-devel/files/alpha-patch
+++ /dev/null
@@ -1,9 +0,0 @@
---- src/blas/gemm/GOTO/ATLU_usergemm.c~ Mon Jun 17 10:38:22 2002
-+++ src/blas/gemm/GOTO/ATLU_usergemm.c Sun Aug 18 10:41:19 2002
-@@ -1,5 +1,5 @@
- #include "atlas_misc.h"
--#include <sys/mman.h>
-+/*#include <sys/mman.h>*/
-
- #ifdef EV6
- #ifdef ATL_OS_OSF1
diff --git a/math/atlas-devel/files/patch-CONFIG+src+SpewMakeInc.c b/math/atlas-devel/files/patch-CONFIG+src+SpewMakeInc.c
deleted file mode 100644
index 502d4c169a0f..000000000000
--- a/math/atlas-devel/files/patch-CONFIG+src+SpewMakeInc.c
+++ /dev/null
@@ -1,20 +0,0 @@
---- CONFIG/src/SpewMakeInc.c.orig 2009-04-07 23:11:39.000000000 +0900
-+++ CONFIG/src/SpewMakeInc.c 2009-04-13 17:20:56.000000000 +0900
-@@ -737,7 +737,7 @@
- fprintf(fpout, "# ------------------------------------\n");
- fprintf(fpout, "# Reference and system libraries\n");
- fprintf(fpout, "# ------------------------------------\n");
-- fprintf(fpout, " FBLASlib = $(LIBdir)/libf77refblas.a\n");
-+ fprintf(fpout, " FBLASlib = -L%%LOCALBASE%%/lib -lblas\n");
- fprintf(fpout, " BLASlib = $(FBLASlib)\n");
- if (LAsrcd)
- {
-@@ -754,7 +754,7 @@
- fprintf(fpout, " SLAPACKlib = \n");
- if (THREADS)
- {
-- fprintf(fpout, " LIBS = -lpthread");
-+ fprintf(fpout, " LIBS = %%PTHREAD_LIBS%%");
- if (OSIsWin(OS))
- fprintf(fpout, " -lkernel32");
- }
diff --git a/math/atlas-devel/files/patch-CONFIG+src+atlcomp.txt b/math/atlas-devel/files/patch-CONFIG+src+atlcomp.txt
deleted file mode 100644
index 7a4be8e203cc..000000000000
--- a/math/atlas-devel/files/patch-CONFIG+src+atlcomp.txt
+++ /dev/null
@@ -1,121 +0,0 @@
---- CONFIG/src/atlcomp.txt 2009-04-07 23:11:39.000000000 +0900
-+++ CONFIG/src/atlcomp.txt 2009-04-13 17:22:20.000000000 +0900
-@@ -40,31 +40,31 @@
- #
- # Core2 & Corei7
- MACH=Corei7 OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
-- 'gcc' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -fno-schedule-insns2'
-+ '%%CC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -fno-schedule-insns2'
- MACH=Core2 OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
-- 'gcc' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2'
-+ '%%CC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2'
- # PPRO,PII,PIII,P4,P4E,K7,HAMMER
- MACH=PPRO,PII,PIII,P4,P4E,K7,HAMMER OS=ALL LVL=1000 COMPS=f77
-- 'gfortran' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
-+ '%%FC%%' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
- MACH=PPRO,PII,PIII,P4,P4E,K7,HAMMER OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
-- 'gcc' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
-+ '%%CC%%' '-fomit-frame-pointer -mfpmath=387 -O2 -falign-loops=4'
- # CoreSolo,CoreDuo
- MACH=CoreSolo,CoreDuo OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
-- 'gcc' '-fomit-frame-pointer -O3 -mfpmath=387'
-+ '%%CC%%' '-fomit-frame-pointer -O3 -mfpmath=387'
- # 3rd generation opteron (Barcelona and descendents)
- MACH=AMD64K10h OS=ALL LVL=1000 COMPS=f77
-- 'gfortran' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
-+ '%%FC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
- MACH=AMD64K10h OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc,icc
-- 'gcc' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
-+ '%%CC%%' '-fomit-frame-pointer -mfpmath=sse -msse3 -O2 -falign-loops=32'
- # UltraSPARC III & IV
- MACH=USIII,USIV OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc
-- 'gcc' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O3 -funroll-all-loops'
-+ '%%CC%%' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O3 -funroll-all-loops'
- MACH=USIII,USIV OS=ALL LVL=1000 COMPS=icc,xcc
-- 'gcc' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O'
-+ '%%CC%%' '-mcpu=ultrasparc3 -mtune=ultrasparc3 -O'
- MACH=USIII,USIV OS=ALL LVL=1000 COMPS=f77
- 'f77' '-dalign -native -xO5'
- MACH=USIII,USIV OS=ALL LVL=100 COMPS=f77
-- 'gfortran' '-O -mcpu=ultrasparc3 -mtune=ultrasparc3'
-+ '%%FC%%' '-O -mcpu=ultrasparc3 -mtune=ultrasparc3'
- MACH=USIII,USIV OS=ALL LVL=10 COMPS=f77
- 'g77' '-O -mcpu=ultrasparc3 -mtune=ultrasparc3'
- #
-@@ -72,11 +72,11 @@
- #
- # These gcc 4 default flags will die on gcc3, allowing gcc3's flags to be used
- MACH=IA64Itan,IA64Itan2 OS=ALL LVL=1010 COMPS=smc,dmc,skc,dkc
-- 'gcc' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
-+ '%%CC%%' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
- MACH=IA64Itan,IA64Itan2 OS=ALL LVL=1000 COMPS=smc,dmc,skc,dkc
-- 'gcc' '-fomit-frame-pointer -O2'
-+ '%%CC%%' '-fomit-frame-pointer -O2'
- MACH=IA64Itan,IA64Itan2 OS=ALL LVL=1010 COMPS=f77
-- 'gfortran' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
-+ '%%FC%%' '-fomit-frame-pointer -O2 -fno-tree-loop-optimize'
- #
- # IRIX/MIPS
- #
-@@ -92,7 +92,7 @@
- # pathcc at -O2 -- seems to be a compiler error
- #
- MACH=MIPSICE9 OS=ALL LVL=500 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-O2 -mips64 -march=5kf -mtune=5kf -fno-schedule-insns -fschedule-insns2 -fno-peephole -fno-peephole2'
-+ '%%CC%%' '-O2 -mips64 -march=5kf -mtune=5kf -fno-schedule-insns -fschedule-insns2 -fno-peephole -fno-peephole2'
- MACH=MIPSICE9 OS=ALL LVL=1000 COMPS=f77
- 'pathf95' '-march=auto -O2'
- MACH=MIPSICE9 OS=ALL LVL=1 COMPS=skc,dkc
-@@ -105,9 +105,9 @@
- # G4 flags
- #
- MACH=PPCG4 OS=ALL LVL=1000 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400'
-+ '%%CC%%' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400'
- MACH=PPCG4 OS=OSX LVL=1001 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400 -no-cpp-precomp -faltivec'
-+ '%%CC%%' '-O3 -maltivec -mabi=altivec -mcpu=7400 -mtune=7400 -no-cpp-precomp -faltivec'
-
- #
- # OS X / PowerPC970; the
-@@ -116,19 +116,19 @@
- # performance by removing them (for all PowerPC platforms)
- #
- MACH=PPCG5 OS=OSX LVL=1001 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -O3'
-+ '%%CC%%' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -O3'
- MACH=PPCG5 OS=OSX LVL=1010 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -force_cpusubtype_ALL -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+ '%%CC%%' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -faltivec -force_cpusubtype_ALL -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=PPCG5 OS=ALL LVL=1000 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -O3'
-+ '%%CC%%' '-mpowerpc64 -maltivec -mabi=altivec -mcpu=970 -mtune=970 -O3'
- MACH=POWER5 OS=ALL LVL=1010 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+ '%%CC%%' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=POWER5 OS=ALL LVL=1010 COMPS=f77
-- 'gfortran' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+ '%%FC%%' '-mcpu=power5 -mtune=power5 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=POWER5 OS=ALL LVL=1010 COMPS=f77
- 'xlf' '-qtune=pwr5 -qarch=pwr5 -O3 -qmaxmem=-1 -qfloat=hsflt'
- MACH=POWER4 OS=ALL LVL=1010 COMPS=icc,dmc,smc,dkc,skc,xcc
-- 'gcc' '-mcpu=power4 -mtune=power4 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
-+ '%%CC%%' '-mcpu=power4 -mtune=power4 -O3 -fno-schedule-insns -fno-rerun-loop-opt'
- MACH=POWER4 OS=ALL LVL=1010 COMPS=f77
- 'xlf' '-qtune=pwr4 -qarch=pwr4 -O3 -qmaxmem=-1 -qfloat=hsflt'
- #
-@@ -148,10 +148,10 @@
- # Generic defaults
- #
- MACH=ALL OS=ALL LVL=5 COMPS=icc,smc,dmc,skc,dkc,xcc
-- 'gcc' '-O -fomit-frame-pointer'
-+ '%%CC%%' '-O -fomit-frame-pointer'
- MACH=ALL OS=ALL LVL=5 COMPS=f77
-- 'gfortran' '-O'
-+ '%%FC%%' '-O'
- MACH=ALL OS=ALL LVL=4 COMPS=f77
-- 'g77' '-O'
-+ '%%FC%%' '-O'
- MACH=ALL OS=ALL LVL=0 COMPS=f77
-- 'f77' '-O'
-+ '%%FC%%' '-O'
diff --git a/math/atlas-devel/files/patch-CONFIG+src+backend+archinfo_freebsd.c b/math/atlas-devel/files/patch-CONFIG+src+backend+archinfo_freebsd.c
deleted file mode 100644
index eb8bb07d29e9..000000000000
--- a/math/atlas-devel/files/patch-CONFIG+src+backend+archinfo_freebsd.c
+++ /dev/null
@@ -1,76 +0,0 @@
---- CONFIG/src/backend/archinfo_freebsd.c.orig Wed Jan 31 06:30:00 2007
-+++ CONFIG/src/backend/archinfo_freebsd.c Thu Feb 8 16:37:05 2007
-@@ -73,13 +73,24 @@
- }
- break;
- case AFSPARC: /* don't know */
-+ if (!CmndOneLine(NULL, "sysctl hw.model", res))
-+ {
-+ if (strstr(res, "UltraSparc-IV")) mach = SunUSIV;
-+ if (strstr(res, "UltraSparc-II")) mach = SunUSII;
-+ if (strstr(res, "UltraSparc-I")) mach = SunUSI;
-+ if (strstr(res, "UltraSparc")) mach = SunUSI;
-+ else mach = SunUSI;
-+ }
- break;
- case AFALPHA:
- #if 0
- if (!CmndOneLine(NULL, "sysctl hw.model", res))
- {
- if (strstr(res, "433au")) mach = Dec21164;
-+ else if (strstr(res, "500au")) mach = Dec21164;
-+ else if (strstr(res, "AlphaPC 164")) mach = Dec21164;
- else if (strstr(res, "XP1000")) mach = Dec21264;
-+ else mach = Dec21264;
- }
- #endif
- break;
-@@ -89,15 +100,33 @@
- if (!CmndOneLine(NULL, "sysctl hw.model", res))
- {
- if (strstr(res, "Pentium Pro")) mach = IntPPRO;
-+ else if (strstr(res, "Pentium(R) D")) mach = IntP4E;
-+ else if (strstr(res, "Pentium(R) Pro")) mach = IntPPRO;
-+ else if (strstr(res, "Pentium 4")) mach = IntP4;
-+ else if (strstr(res, "Pentium(R) 4")) mach = IntP4;
-+ else if (strstr(res, "Pentium(R) M")) mach = IntP4;
- else if (strstr(res, "Pentium III")) mach = IntPIII;
- else if (strstr(res, "Pentium II ")) mach = IntPII;
- else if (strstr(res, "Athlon")) mach = AmdAthlon;
-+ else if (strstr(res, "Pentium III/Pentium III")) mach = IntPIII;
-+ else if (strstr(res, "Pentium(R) III")) mach = IntPIII;
-+ else if (strstr(res, "Pentium II")) mach = IntPII;
-+ else if (strstr(res, "Pentium II/PentiumII")) mach = IntPII;
-+ else if (strstr(res, "Pentium(R) II ")) mach = IntPII;
-+ else if (strstr(res, "Celeron")) mach = IntPII;
-+ else if (strstr(res, "Celeron(R)")) mach = IntPII;
-+ else if (strstr(res, "Opteron(tm)")) mach = AmdHammer;
-+ else if (strstr(res, "AMD Athlon(tm) 64")) mach = AmdHammer;
- else if (strstr(res, "AMD-K7")) mach = AmdAthlon;
-- else if (strstr(res, "32 bit Hammer")) mach = AmdHammer;
-- else if (strstr(res, "64 bit Hammer")) mach = AmdHammer;
-- else if (strstr(res, "Pentium/P55C")) mach = IntP5MMX; /* sent by */
-- else if (strstr(res, "Pentium")) mach=IntP5; /* Nakata Maho */
- else if (strstr(res, "iMac4,1")) mach=IntCoreDuo;
-+ else if (strstr(res, "Sempron(tm)")) mach = AmdAthlon;
-+ else if (strstr(res, "AMD-K6(tm)")) mach = IntP5MMX;
-+ else if (strstr(res, "Pentium/P55C")) mach = IntP5MMX;
-+ else if (strstr(res, "Pentium/P54C")) mach=IntP5;
-+ else if (strstr(res, "Pentium")) mach=IntP5;
-+ else if (strstr(res, "VIA")) mach=IntP5MMX;
-+ else if (strstr(res, "Crusoe(tm)")) mach=IntP5MMX;
-+ else mach = IntP5;
- }
- break;
- default:;
-@@ -156,8 +185,8 @@
- {
- int mhz=0;
- char res[1024];
-- if (!CmndOneLine(NULL, "sysctl hw.cpufrequency", res) )
-- mhz = GetFirstDouble(res) / 1000000;
-+ if (!CmndOneLine(NULL, "sysctl kern.timecounter.choice dev.cpu.0.freq | grep dev", res) ) //requires cpufreq.ko
-+ mhz = GetLastInt(res);
- return(mhz);
- }
-
diff --git a/math/atlas-devel/files/patch-tune+sysinfo+L1CacheSize.c b/math/atlas-devel/files/patch-tune+sysinfo+L1CacheSize.c
deleted file mode 100644
index f93ac6da884f..000000000000
--- a/math/atlas-devel/files/patch-tune+sysinfo+L1CacheSize.c
+++ /dev/null
@@ -1,20 +0,0 @@
---- tune/sysinfo/L1CacheSize.c.orig Tue Dec 19 06:48:02 2006
-+++ tune/sysinfo/L1CacheSize.c Wed Dec 27 12:43:59 2006
-@@ -31,7 +31,7 @@
- #include <stdio.h>
- #include <stdlib.h>
-
--#define REPS 4096
-+#define REPS 12288
-
- #ifndef time00
- #define time00 ATL_cputime
-@@ -267,7 +267,7 @@
-
- main(int nargs, char *args[])
- {
-- int L1Size, MaxSize=64, correct=1;
-+ int L1Size, MaxSize=256, correct=1;
- FILE *L1f;
-
- if (nargs > 2)
diff --git a/math/atlas-devel/files/thread-patch b/math/atlas-devel/files/thread-patch
deleted file mode 100644
index 8dc50b6dbf7a..000000000000
--- a/math/atlas-devel/files/thread-patch
+++ /dev/null
@@ -1,12 +0,0 @@
---- CONFIG/src/SpewMakeInc.c~ 2009-04-13 17:52:14.000000000 +0900
-+++ CONFIG/src/SpewMakeInc.c 2009-04-13 17:53:05.000000000 +0900
-@@ -423,7 +423,8 @@
- &srcdir, &blddir, &USEDEFL1, &USEARCHDEF, &LATUNE, &nof77,
- &f2cdefs, &cdefs, &pmake, &flapack, &smaflags, &dmaflags,
- &f77lib, &LAsrcd, &l2size, &targ);
-- if (ncpu > 1) THREADS = 1;
-+/* if (ncpu > 1) THREADS = 1; */
-+ THREADS = 1;
- if (!outfile)
- fpout = stdout;
- else
diff --git a/math/atlas-devel/pkg-descr b/math/atlas-devel/pkg-descr
deleted file mode 100644
index c59c0267a409..000000000000
--- a/math/atlas-devel/pkg-descr
+++ /dev/null
@@ -1,18 +0,0 @@
-The ATLAS (Automatically Tuned Linear Algebra Software) project is
-an ongoing research effort focusing on applying empirical techniques
-in order to provide portable performance.
-
-At present, it provides C and Fortran77 interfaces to a
-portably efficient BLAS implementation, as well as a few routines from LAPACK.
-
-If you use blas, you can simply change flags when linking,
-from -lblas to -lf77blas -latlas (order is important).
-
-A few routines from LAPACK are merged into one library as libalapack.
-It requres both C and Fortran77 interfaces, and thus that link line would be:
--lalapack -lf77blas -lcblas -latlas -lg2c -lm .
-
-Other choice of CC and CFLAGS are *NOT* recommended.
-They are already optimized for this platform and automatically searched.
-
-WWW: http://math-atlas.sourceforge.net/
diff --git a/math/atlas-devel/pkg-plist b/math/atlas-devel/pkg-plist
deleted file mode 100644
index 73fb82ea9e77..000000000000
--- a/math/atlas-devel/pkg-plist
+++ /dev/null
@@ -1,50 +0,0 @@
-include/cblas.h
-include/clapack.h
-%%WITH_STATICLIB%%lib/libalapack.a
-lib/libalapack.so.2
-lib/libalapack.so
-%%WITH_STATICLIB%%lib/libalapack_r.a
-lib/libalapack_r.so.2
-lib/libalapack_r.so
-%%WITH_STATICLIB%%lib/libatlas.a
-lib/libatlas.so.2
-lib/libatlas.so
-%%WITH_STATICLIB%%lib/libatlas_r.a
-lib/libatlas_r.so.2
-lib/libatlas_r.so
-%%WITH_STATICLIB%%lib/libcblas.a
-lib/libcblas.so.2
-lib/libcblas.so
-%%WITH_STATICLIB%%lib/libcblas_r.a
-lib/libcblas_r.so.2
-lib/libcblas_r.so
-%%WITH_STATICLIB%%lib/libf77blas.a
-lib/libf77blas.so.2
-lib/libf77blas.so
-%%WITH_STATICLIB%%lib/libf77blas_r.a
-lib/libf77blas_r.so.2
-lib/libf77blas_r.so
-%%WITH_STATICLIB%%lib/libptcblas.a
-lib/libptcblas.so.2
-lib/libptcblas.so
-%%WITH_STATICLIB%%lib/libptf77blas.a
-lib/libptf77blas.so.2
-lib/libptf77blas.so
-%%PORTDOCS%%share/doc/atlas/AtlasCredits.txt
-%%PORTDOCS%%share/doc/atlas/BootSequence.txt
-%%PORTDOCS%%share/doc/atlas/ChangeLog
-%%PORTDOCS%%share/doc/atlas/DirStruct.txt
-%%PORTDOCS%%share/doc/atlas/INDEX.txt
-%%PORTDOCS%%share/doc/atlas/LibReadme.txt
-%%PORTDOCS%%share/doc/atlas/TestTime.txt
-%%PORTDOCS%%share/doc/atlas/TroubleShoot.txt
-%%PORTDOCS%%share/doc/atlas/Windows.txt
-%%PORTDOCS%%share/doc/atlas/atlas_contrib.pdf
-%%PORTDOCS%%share/doc/atlas/atlas_devel.pdf
-%%PORTDOCS%%share/doc/atlas/atlas_install.pdf
-%%PORTDOCS%%share/doc/atlas/atlas_over.pdf
-%%PORTDOCS%%share/doc/atlas/cblas.pdf
-%%PORTDOCS%%share/doc/atlas/cblasqref.pdf
-%%PORTDOCS%%share/doc/atlas/f77blasqref.pdf
-%%PORTDOCS%%share/doc/atlas/lapackqref.pdf
-%%PORTDOCS%%@dirrm share/doc/atlas
diff --git a/math/bihar/Makefile b/math/bihar/Makefile
deleted file mode 100644
index 637b4ddf5089..000000000000
--- a/math/bihar/Makefile
+++ /dev/null
@@ -1,61 +0,0 @@
-# Created by: Pedro Giffuni S.
-# $FreeBSD$
-
-PORTNAME= bihar
-PORTVERSION= 1.0
-PORTREVISION= 6
-CATEGORIES= math
-MASTER_SITES= NL
-DISTFILES= dbihar.f dbipl.f dbiplr.f dbisld.f dbislf.f dbmult.f dbplrm.f \
- dcfftb.f dcfftf.f dcffti.f dcftb1.f dcftf1.f dcfti1.f dcmult.f \
- dconju.f dcosqb.f dcosqf.f dcosqi.f dcost.f dcosti.f dcsqb1.f \
- dcsqf1.f defft1.f defftb.f defftf.f deffti.f dftrnx.f dftrny.f \
- dhzeri.f dhzero.f dlmult.f dlplrm.f dmatge.f dpentf.f dpmult.f \
- dpplrm.f dpreco.f dpssb.f dpssb2.f dpssb3.f dpssb4.f dpssb5.f \
- dpssf.f dpssf2.f dpssf3.f dpssf4.f dpssf5.f dradb2.f dradb3.f \
- dradb4.f dradb5.f dradbg.f dradf2.f dradf3.f dradf4.f dradf5.f \
- dradfg.f drfftb.f drfftf.f drffti.f drftb1.f drftf1.f drfti1.f \
- dsinqb.f dsinqf.f dsinqi.f dsint.f dsinti.f dstart.f dtrigi.f \
- dupdat.f sbihar.f sbipl.f sbiplr.f sbisld.f sbislf.f sbmult.f \
- sbplrm.f scfftb.f scfftf.f scffti.f scftb1.f scftf1.f scfti1.f \
- scmult.f sconju.f scosqb.f scosqf.f scosqi.f scost.f scosti.f \
- scsqb1.f scsqf1.f sefft1.f sefftb.f sefftf.f seffti.f sftrnx.f \
- sftrny.f shzeri.f shzero.f slmult.f slplrm.f smatge.f spentf.f \
- spmult.f spplrm.f spreco.f spssb.f spssb2.f spssb3.f spssb4.f \
- spssb5.f spssf.f spssf2.f spssf3.f spssf4.f spssf5.f sradb2.f \
- sradb3.f sradb4.f sradb5.f sradbg.f sradf2.f sradf3.f sradf4.f \
- sradf5.f sradfg.f srfftb.f srfftf.f srffti.f srftb1.f srftf1.f \
- srfti1.f ssinqb.f ssinqf.f ssinqi.f ssint.f ssinti.f sstart.f \
- strigi.f supdat.f
-.if !defined(NOPORTDOCS)
-DISTFILES+= fft.doc
-.endif
-DIST_SUBDIR= ${PORTNAME}
-EXTRACT_ONLY= #empty
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Biharmonic equation in rectangular geometry and polar coordinates
-
-LIB_DEPENDS= liblinpack.so:${PORTSDIR}/math/linpack
-
-NO_STAGE= yes
-NO_WRKSUBDIR= yes
-USE_LDCONFIG= yes
-USES= fortran
-
-.if !defined(NOPORTDOCS)
-PORTDOCS= fft.doc
-
-post-install:
- @${MKDIR} ${DOCSDIR}
- @${INSTALL_DATA} ${WRKSRC}/fft.doc ${DOCSDIR}
-
-.endif
-
-post-extract:
- @(cd ${_DISTDIR}; ${CP} ${DISTFILES} ${WRKSRC})
-
-pre-build:
- @${CP} ${FILESDIR}/makefile.lib ${WRKSRC}/Makefile
-
-.include <bsd.port.mk>
diff --git a/math/bihar/distinfo b/math/bihar/distinfo
deleted file mode 100644
index 0d516eb9a1c9..000000000000
--- a/math/bihar/distinfo
+++ /dev/null
@@ -1,286 +0,0 @@
-SHA256 (bihar/dbihar.f) = f4e80651d98fff5d1d3360259df36aa1aedc6c7d7ebedb1d0ab39204f995c19b
-SIZE (bihar/dbihar.f) = 15961
-SHA256 (bihar/dbipl.f) = a41a802c7ed47437886e70fdfbac3c34afec4bd953d8b16384fb269f2215c145
-SIZE (bihar/dbipl.f) = 7252
-SHA256 (bihar/dbiplr.f) = 0ff75154b14087bbe047dd835725915e7e796557c1f54cbca82a6b9c8202e32d
-SIZE (bihar/dbiplr.f) = 7967
-SHA256 (bihar/dbisld.f) = 053c1bcdd20a532c8b3305d8318aa14a8a0dd5be49b0f7673774ff6206c5a218
-SIZE (bihar/dbisld.f) = 2725
-SHA256 (bihar/dbislf.f) = 50bba7f931d604b2ccf691beec0940d0affef3ab51d978eaf1f52154a6f7470c
-SIZE (bihar/dbislf.f) = 2374
-SHA256 (bihar/dbmult.f) = c9cd15cd68c48faaba7384b465693569f015f097a4f3a22f1ca0b09e65488dc4
-SIZE (bihar/dbmult.f) = 1257
-SHA256 (bihar/dbplrm.f) = 4848f0e98d759d14fcc82ad21ed2759d012a51d570b4de7c6bf76c993728c04f
-SIZE (bihar/dbplrm.f) = 2238
-SHA256 (bihar/dcfftb.f) = 7c5aa8bb4648b320bff2b814a6015e4904d1abf0e96092c36d26e13ec06e527d
-SIZE (bihar/dcfftb.f) = 220
-SHA256 (bihar/dcfftf.f) = a1bffa0a86950ca576f5b4e5d0342c48a4ca2a832cc2e186e89048c8785a8361
-SIZE (bihar/dcfftf.f) = 220
-SHA256 (bihar/dcffti.f) = 1d3b8b1592e997722b3ce3eec191dd0371c6819f98299dc5f39c588f106b33fa
-SIZE (bihar/dcffti.f) = 204
-SHA256 (bihar/dcftb1.f) = aa5a1bca13a6df5ca9dd2b7076083bf7d01db908c41b6fe53c7571ad084d10a9
-SIZE (bihar/dcftb1.f) = 1789
-SHA256 (bihar/dcftf1.f) = b486fa0bfeef453d9491e1eeb1d7f79a409861b4b342aa3c33a36a57ab4bab87
-SIZE (bihar/dcftf1.f) = 1789
-SHA256 (bihar/dcfti1.f) = 49ddaf6d92b2132e26356e664e2b829b875b882a45986bb55b7a4a9ffd8b640a
-SIZE (bihar/dcfti1.f) = 1497
-SHA256 (bihar/dcmult.f) = 6bf35183c1a83c68ff1026b3ea2d600a846e8a510f27002b4e27c701dca70a5b
-SIZE (bihar/dcmult.f) = 955
-SHA256 (bihar/dconju.f) = 5d644e85cc9e3495493a810b8ea93ab21bc6a7cc82324af67864a0a4bb464e5f
-SIZE (bihar/dconju.f) = 2137
-SHA256 (bihar/dcosqb.f) = c51aa80200e06292e09c7779daa8f503998015ac98c5e5fce2713535c0ade87b
-SIZE (bihar/dcosqb.f) = 373
-SHA256 (bihar/dcosqf.f) = f42373d4e8f093315d5d0d9735aef860457df0f62b78357254088ebf616da4a6
-SIZE (bihar/dcosqf.f) = 330
-SHA256 (bihar/dcosqi.f) = b2181db51dbc52d164a7043547b203a58b7749267ea1a878d3260839cfed410a
-SIZE (bihar/dcosqi.f) = 331
-SHA256 (bihar/dcost.f) = 3eab07221b9bb503ceb8066ffe505960b71d17366838b533e2f81d2966057675
-SIZE (bihar/dcost.f) = 1017
-SHA256 (bihar/dcosti.f) = 8f62a4338d335d25826d0d474310be371e30062dcc5388b42469642eb60a2989
-SIZE (bihar/dcosti.f) = 474
-SHA256 (bihar/dcsqb1.f) = 5c1ef98da371d60a31b136d240fe6cd99f4e79f4b4c1af9b9c502a3abc108b24
-SIZE (bihar/dcsqb1.f) = 720
-SHA256 (bihar/dcsqf1.f) = dd8bce2cbd7c365f4b50cac157c6a13c3b601ebd7e9cb13d2fe74c39c93a8e79
-SIZE (bihar/dcsqf1.f) = 677
-SHA256 (bihar/defft1.f) = d7b1e84429a7a0d05e3acf081f20cc1ccfc7863df76968fdaaff7c407a80c345
-SIZE (bihar/defft1.f) = 1609
-SHA256 (bihar/defftb.f) = 95917447037fd5e0ca4593c4d1d2ee2612ad0b58ea13a3319bc171d66fe182d5
-SIZE (bihar/defftb.f) = 716
-SHA256 (bihar/defftf.f) = 4eb1afa3565eb41ec1d82b87394623a82e338af72e543bacec7dc9fe7c8f229a
-SIZE (bihar/defftf.f) = 940
-SHA256 (bihar/deffti.f) = b1fccc1652f162561bfb2f1c1f9aa4227c587428589900584fca94af301a8dd1
-SIZE (bihar/deffti.f) = 170
-SHA256 (bihar/dftrnx.f) = f57787bf45f74e9c298e37ab20bd8154bd68edf6a1326f0b4383b8a9d9f8acee
-SIZE (bihar/dftrnx.f) = 852
-SHA256 (bihar/dftrny.f) = 104259e8866a65325b4843ffb23af98637924a5ea764a1c942a3c9132749f2eb
-SIZE (bihar/dftrny.f) = 842
-SHA256 (bihar/dhzeri.f) = 5ac929143e1235c7dbbf91287bf6f428f39318cd63b0c006726c6d68136c8694
-SIZE (bihar/dhzeri.f) = 1328
-SHA256 (bihar/dhzero.f) = 4b5d1043921adc245463dbb93fdb3f0e6836befefb0fccb036c408f4b4f1cd27
-SIZE (bihar/dhzero.f) = 585
-SHA256 (bihar/dlmult.f) = d937fd06058812fb310fbf4ddc90231cc75b34b0de55fac16831923a568f9455
-SIZE (bihar/dlmult.f) = 1080
-SHA256 (bihar/dlplrm.f) = 87be0f153f392f3d883221f65d19db4e713de375dda1acac3a82202eccca5110
-SIZE (bihar/dlplrm.f) = 2524
-SHA256 (bihar/dmatge.f) = 11b4d8e0d962834a08053080481752cbde3104e64c9728668effda8f2df97794
-SIZE (bihar/dmatge.f) = 2114
-SHA256 (bihar/dpentf.f) = b6f0f7651df9cb25c4595503e6a2a910f7768467c5bb594b183e45080b106dd5
-SIZE (bihar/dpentf.f) = 1276
-SHA256 (bihar/dpmult.f) = eccb6fa95d91a4937dc695d5aad4d04f014588e8ef936c2e31be7b1e7d0fe0bf
-SIZE (bihar/dpmult.f) = 581
-SHA256 (bihar/dpplrm.f) = bf2d98178672d87bd02ca6c1602380f843a96b9711e8e85792a06d33f833ac37
-SIZE (bihar/dpplrm.f) = 826
-SHA256 (bihar/dpreco.f) = 7f2a3068cd24ec4cef3d6621a04e56746ff669000aa35b9d8270667957e075fd
-SIZE (bihar/dpreco.f) = 1228
-SHA256 (bihar/dpssb.f) = e05a50128abfd15591f3d995eddeadabf06582537d77ef3a8f69a4f58f132d91
-SIZE (bihar/dpssb.f) = 3154
-SHA256 (bihar/dpssb2.f) = a4f36d9d7d7a6c2921de5c5b6cc7e0f7a3fce3a89127b7a78e46f94dd0a96505
-SIZE (bihar/dpssb2.f) = 735
-SHA256 (bihar/dpssb3.f) = fe8df5079c6842e4cf30f8b69257bbafa9492c89ce1f93732afef4a13b513533
-SIZE (bihar/dpssb3.f) = 1543
-SHA256 (bihar/dpssb4.f) = b77dc9e41fdacb77d64960d855a8478c7c2cc718e10a0b60037128636e82282d
-SIZE (bihar/dpssb4.f) = 1747
-SHA256 (bihar/dpssb5.f) = 10f4d57ce360faf431d232d709191544f4450a791ca85cfd5b5ee9cb50f84a33
-SIZE (bihar/dpssb5.f) = 3137
-SHA256 (bihar/dpssf.f) = 3029209d52fe9198ef9ece6108b3ec143f8cc7b052a06b9049af83f4f75d765e
-SIZE (bihar/dpssf.f) = 3155
-SHA256 (bihar/dpssf2.f) = eb823775755547c85d692da7ec08191459358d6e22c47e552f32fb4952756034
-SIZE (bihar/dpssf2.f) = 735
-SHA256 (bihar/dpssf3.f) = 9d0cfcc23bbdf11b61691c8e682f3c395b26e2e8debdd9ca0630b90bc4026491
-SIZE (bihar/dpssf3.f) = 1501
-SHA256 (bihar/dpssf4.f) = b4792fadf8d591a3a701a2fe3af89d9041bf120afc8e57a45aaaa7d42222f71c
-SIZE (bihar/dpssf4.f) = 1747
-SHA256 (bihar/dpssf5.f) = 3c1f7e856f2b8ccf7513bc29af42758ab8e9c3fe151f5f79f2054e8d70d0a444
-SIZE (bihar/dpssf5.f) = 2983
-SHA256 (bihar/dradb2.f) = 01d33200b60b78e4c136dcafe37c1fb7ffbc7542badda32e397455695c73fda2
-SIZE (bihar/dradb2.f) = 858
-SHA256 (bihar/dradb3.f) = 5ea3c13dbfd0d9d85f0f37d872b528291e29c38028c88e378e5d0ca85748d205
-SIZE (bihar/dradb3.f) = 1340
-SHA256 (bihar/dradb4.f) = 4700e952bb5241df79fc0090fc136cf6a3bb576c81e803ccbfc0ba42a23a65fb
-SIZE (bihar/dradb4.f) = 1993
-SHA256 (bihar/dradb5.f) = 5d8c52fa69d97dd08447859dc3e38398c347293e817cc294d08db57e98f7be94
-SIZE (bihar/dradb5.f) = 2595
-SHA256 (bihar/dradbg.f) = b34b8e9211e9792dcd21223ec87cc76b316dde02531463c59bc41b711b628b8a
-SIZE (bihar/dradbg.f) = 4673
-SHA256 (bihar/dradf2.f) = e5c3d09fc2b6b008efc88f00b9d93efc296b30d79d17948cb644029dec3f97e7
-SIZE (bihar/dradf2.f) = 830
-SHA256 (bihar/dradf3.f) = 4e44da048b59d240cec7e8b5fc32686896175134cb8f5f5e747a6a9255812836
-SIZE (bihar/dradf3.f) = 1290
-SHA256 (bihar/dradf4.f) = ef43ae6a445f51de65951356a3ea7bfb27cc5810611b0f09dc70f37e33f43f5f
-SIZE (bihar/dradf4.f) = 1897
-SHA256 (bihar/dradf5.f) = 8554617cd10b356290812ab35b26dca7648c4e88b378d0e74bbeb79611f4b1ca
-SIZE (bihar/dradf5.f) = 2495
-SHA256 (bihar/dradfg.f) = d1e5eb53f215d2733c251a4a0bd0bbbc65e979ff6806e209efbb358f3687f41b
-SIZE (bihar/dradfg.f) = 4679
-SHA256 (bihar/drfftb.f) = 0ca83a7643f7d2779da7a2411322a2f16d07d9edaff77a7381b97ea3da2cff54
-SIZE (bihar/drfftb.f) = 184
-SHA256 (bihar/drfftf.f) = 98db26e584259a604c13f6cffa4e3690cb93e9767ff805de04b5876ffc88db70
-SIZE (bihar/drfftf.f) = 184
-SHA256 (bihar/drffti.f) = acc12c057b233a442f5c00e25f9042026cde83fdebea7434afb41dfd39080d21
-SIZE (bihar/drffti.f) = 168
-SHA256 (bihar/drftb1.f) = 5e22759a5efd19ed0d5bd72008c9ebf1a1c7f7d2a2a7b6b0f02a44b2e448276f
-SIZE (bihar/drftb1.f) = 1723
-SHA256 (bihar/drftf1.f) = e728af20d04e69e6b6b2dfc3306ab978e12a591d0635f471eec6b0a3792bf255
-SIZE (bihar/drftf1.f) = 1722
-SHA256 (bihar/drfti1.f) = b5cd70a3408fddd28c7942c7cf2cdc50f9e83ec45e4cc5a45f60bf3b7e9c5024
-SIZE (bihar/drfti1.f) = 1392
-SHA256 (bihar/dsinqb.f) = 33301603a915ec4e88af3fa207c4ab23fbbb31102377ca1bbfd8bf04000e70ee
-SIZE (bihar/dsinqb.f) = 409
-SHA256 (bihar/dsinqf.f) = bc601362f7141ff17516dc05ef1b39121b0415ba63914b0cf96ce179796df54c
-SIZE (bihar/dsinqf.f) = 370
-SHA256 (bihar/dsinqi.f) = 234f4dd31416f9f870c3f3225d73c1fecfbb7e1f69b67aca9e774c8cbd8f9b79
-SIZE (bihar/dsinqi.f) = 121
-SHA256 (bihar/dsint.f) = 7e107ab1a7a93fca4916a30ad8913222fdfd4cdacb6cf4e728e29bca81d22dc9
-SIZE (bihar/dsint.f) = 875
-SHA256 (bihar/dsinti.f) = 65ad1ad403d83a08e363ace95e8ea0ba1ffd5339d74038dc7aee90dbb22ea70a
-SIZE (bihar/dsinti.f) = 400
-SHA256 (bihar/dstart.f) = 98df10bb37527c4514bb76a2897c6ace112f626fc9df9ece72ad902de069ac44
-SIZE (bihar/dstart.f) = 1845
-SHA256 (bihar/dtrigi.f) = fd959ff168272bb1d7c34bca00f0a17a327f3d4cf5ed44273963d9d7c19b5c86
-SIZE (bihar/dtrigi.f) = 1706
-SHA256 (bihar/dupdat.f) = 3b05492ae244fcbefe9bcff7678ab86a4305d9e75a9a57e4fdfed7daf74b3e5a
-SIZE (bihar/dupdat.f) = 1327
-SHA256 (bihar/sbihar.f) = 99811e0da4c352f1642b92cb2afc51f130fe1bb1530cafb2bf85980a379984ce
-SIZE (bihar/sbihar.f) = 15913
-SHA256 (bihar/sbipl.f) = 9380c7d012dd0b232598e08ae9cb6fd3ebd25605c8d3205ea97698f1607166fc
-SIZE (bihar/sbipl.f) = 7168
-SHA256 (bihar/sbiplr.f) = 3fadeed1ab582d48bdf337a04e7cf71fe37c52ee3e2a4317b61ae5034fe6dd8e
-SIZE (bihar/sbiplr.f) = 7940
-SHA256 (bihar/sbisld.f) = 57ac9bd608b783d6bdfc280724835cd9cbc6fce4d70868e8d4f6f8629d9078a0
-SIZE (bihar/sbisld.f) = 2677
-SHA256 (bihar/sbislf.f) = 66a091384d548c514efa47216cad035780c4647555e3ac132dfebc8a9903100e
-SIZE (bihar/sbislf.f) = 2314
-SHA256 (bihar/sbmult.f) = 5d12fde107296c7d8ec620d0bed08681920d8a62eb82d2aff6b5876bee19491c
-SIZE (bihar/sbmult.f) = 1209
-SHA256 (bihar/sbplrm.f) = a433ffb6e5a68722e1c448323dce2b89f73ebced2119212609847791ae94e24c
-SIZE (bihar/sbplrm.f) = 2190
-SHA256 (bihar/scfftb.f) = 565a64447bc4f37b27c1176cefe770e8f626ac85525aa47a60fd8c56e071e8c7
-SIZE (bihar/scfftb.f) = 208
-SHA256 (bihar/scfftf.f) = 8eb9337571aa16acd7e7a00b53b187bc967ced6be867bbcf0f4e7ad731c3afd2
-SIZE (bihar/scfftf.f) = 208
-SHA256 (bihar/scffti.f) = d6689dfc66520a3b6f073f3099b1b72aa6be05a92e7445685319cbdccfff3a11
-SIZE (bihar/scffti.f) = 192
-SHA256 (bihar/scftb1.f) = 30fe2dabc041e5c15c8208198ca0afced3c953bbeb049ab0a6f7ac4d2e5264c8
-SIZE (bihar/scftb1.f) = 1777
-SHA256 (bihar/scftf1.f) = 3274bd0a3039023164407837847e5cf6213ffafd006c53a0257ca2d329d7fff5
-SIZE (bihar/scftf1.f) = 1777
-SHA256 (bihar/scfti1.f) = 6b700de79267f5a97364bfb5e673a7415060c17d88f85d51befcb390b014eed8
-SIZE (bihar/scfti1.f) = 1481
-SHA256 (bihar/scmult.f) = 3f806033bb4c0f70ac77722e4e1b07a14092f048e3ceb934d4b52aefa547e23b
-SIZE (bihar/scmult.f) = 907
-SHA256 (bihar/sconju.f) = 5db1ef81e5a22a29851f132055451524406ffdaf7ba797ca433bd925ae907c5d
-SIZE (bihar/sconju.f) = 2077
-SHA256 (bihar/scosqb.f) = fa0f05a46904629d7a179addc2ecc4b9b7315dfdf53ee2416fd0579e527998bb
-SIZE (bihar/scosqb.f) = 361
-SHA256 (bihar/scosqf.f) = ceb7c93872bab6e9d9c57f033085329c8b473bdbbfbaf2a084fd43be6ee04cbf
-SIZE (bihar/scosqf.f) = 318
-SHA256 (bihar/scosqi.f) = 53d713d596b3542b1ea571a45455ee92d2ccae8075a04a557f9b0d4caf5ebb7e
-SIZE (bihar/scosqi.f) = 317
-SHA256 (bihar/scost.f) = fecd838d7ef2e089ac49edcea14cb024fc15741f692f4beebdd4be3e92e74ad6
-SIZE (bihar/scost.f) = 1005
-SHA256 (bihar/scosti.f) = d90cf0f646d293cc2d0d0996b20b99c0bacb3ec01a25bb9c94fffabba203bdc7
-SIZE (bihar/scosti.f) = 459
-SHA256 (bihar/scsqb1.f) = 0c929e6b298f1d732e2cdb7b4671041b4a397060f42b16da25a52447b49d50a7
-SIZE (bihar/scsqb1.f) = 708
-SHA256 (bihar/scsqf1.f) = 3265d3b6c0f098e4069d6c5e7d96e1b1d1a0bb65df2d7be37d05c710deec5101
-SIZE (bihar/scsqf1.f) = 665
-SHA256 (bihar/sefft1.f) = 69ef17422de24a3e4bf6b669daa17c38bf3503fa58646e22acc26f4438eea7e9
-SIZE (bihar/sefft1.f) = 1593
-SHA256 (bihar/sefftb.f) = 0d24731368d9d291b8b44980fbb3e0b68b977060d7acd08e04fa221bd8864374
-SIZE (bihar/sefftb.f) = 704
-SHA256 (bihar/sefftf.f) = bcb322af923cd4f45ccb8c54de69edfd4cae463dcae7e48bcd184b8d0d69636f
-SIZE (bihar/sefftf.f) = 927
-SHA256 (bihar/seffti.f) = 410955ebf058f4928dbf48cdba3c51e67252ca53c117c99ebd5c7cc2d887fde3
-SIZE (bihar/seffti.f) = 158
-SHA256 (bihar/sftrnx.f) = 3e4d7800cf53e0ead36bbebdf44159ecd456df095b8e7e145364a16c68585d39
-SIZE (bihar/sftrnx.f) = 816
-SHA256 (bihar/sftrny.f) = 70ad1effbdb66c70dceb3aaa50dafece8ca4086fdca31ccdd55a37cfe2c47e96
-SIZE (bihar/sftrny.f) = 818
-SHA256 (bihar/shzeri.f) = 3181f100ab22dc09edce3649d2d89f0c81df31afd329fe8a3798af0c9587af11
-SIZE (bihar/shzeri.f) = 1292
-SHA256 (bihar/shzero.f) = a947fa22201b752f99fa357f2dc0b8c976364b39e5def81b1c05d01f3bd3a7be
-SIZE (bihar/shzero.f) = 573
-SHA256 (bihar/slmult.f) = c6f7d01e8db8b123741916de95eaa5a477ce17996c105b1bd1b919d751675b49
-SIZE (bihar/slmult.f) = 1044
-SHA256 (bihar/slplrm.f) = c55a3094aac3c7276e7a7393c554023513e8b3d87c9642e5fdb8da114d8ef3dc
-SIZE (bihar/slplrm.f) = 2476
-SHA256 (bihar/smatge.f) = 6f95a30f9d4e5c5f9c97496c70addf41bfd3345630e38ae1ec21c8e836bad7e7
-SIZE (bihar/smatge.f) = 2042
-SHA256 (bihar/spentf.f) = 947d80860a56c2fa45f4d3db0309561a3dd9f716d6ef5df2e6c95aaa6c4bc1ba
-SIZE (bihar/spentf.f) = 1216
-SHA256 (bihar/spmult.f) = 58dade73b47a845a9a7993368f401fc6f6f65a3f873fd72a0c1b15205c70a728
-SIZE (bihar/spmult.f) = 545
-SHA256 (bihar/spplrm.f) = c8b363bf0fbaedd14145630ab779f178c973517760e820ed9d4bd9fbffc2c1d4
-SIZE (bihar/spplrm.f) = 778
-SHA256 (bihar/spreco.f) = 76664d7189c6bf335a5b70064343f26506184e7f35a5c5474741cd8cc10e8b87
-SIZE (bihar/spreco.f) = 1168
-SHA256 (bihar/spssb.f) = 0d3f88903cd50bc25e50cf6cf3014e1ff966c09a105b16b9871a3cbc852a3123
-SIZE (bihar/spssb.f) = 3142
-SHA256 (bihar/spssb2.f) = 724dd30650c5bc7c2df8255ba28ac0af141d9f283a205df73b740ca90169b3ea
-SIZE (bihar/spssb2.f) = 723
-SHA256 (bihar/spssb3.f) = 2e92f50095a1f3fa1ae476d227a09596aa79f59d930170f52fa1c5fa85c1778c
-SIZE (bihar/spssb3.f) = 1531
-SHA256 (bihar/spssb4.f) = 591bffcbbf6f48efe43a8cd76da4454acca2e6486e5615759d6d9c7ce3afde3f
-SIZE (bihar/spssb4.f) = 1735
-SHA256 (bihar/spssb5.f) = f243ac5831ffa263823057fac95e83f99e0217fe1a494193a971ab199f702d86
-SIZE (bihar/spssb5.f) = 3125
-SHA256 (bihar/spssf.f) = 95cc5c79d19a4f1f784f7d221d3259f785a84472d55e1a3fdd29183e509312af
-SIZE (bihar/spssf.f) = 3143
-SHA256 (bihar/spssf2.f) = 1bcb54ed3ecaa5cfb9c24a26cc056847af64639867b95350d0c13aa184f61109
-SIZE (bihar/spssf2.f) = 723
-SHA256 (bihar/spssf3.f) = 0a400cef1eb08cbc05854bef972a1327ff72e0618cb7d74daec1874e14a212b3
-SIZE (bihar/spssf3.f) = 1489
-SHA256 (bihar/spssf4.f) = 91264b90e09f97552afc948d66334e4c841c32f254f72c46ae11aceba02c5610
-SIZE (bihar/spssf4.f) = 1735
-SHA256 (bihar/spssf5.f) = 77eac16bebfeebbda454f4b370930d6af062e90058ee91446e66f55954ee0550
-SIZE (bihar/spssf5.f) = 2971
-SHA256 (bihar/sradb2.f) = 678ec0eaace0a596dcfa48ff247c392f29a393744243f8d8d2754282f60b5a33
-SIZE (bihar/sradb2.f) = 846
-SHA256 (bihar/sradb3.f) = ada805ecc4bbf8561b28eb47ae38427ab6d80d44fd12591440165c3859410437
-SIZE (bihar/sradb3.f) = 1328
-SHA256 (bihar/sradb4.f) = f8fe3797270a7510358a0614b6dd8d9293c3fe1a7cb9c8bbc4b2c105e3faf049
-SIZE (bihar/sradb4.f) = 1981
-SHA256 (bihar/sradb5.f) = 60ec06673fab0f7bc68046d1970c2fc881c058734beb167781b89e7799813226
-SIZE (bihar/sradb5.f) = 2583
-SHA256 (bihar/sradbg.f) = 7a892fdf738a08236aec1e624ac8dc0b3a01d05fbfbecea173c26d6b40423158
-SIZE (bihar/sradbg.f) = 4658
-SHA256 (bihar/sradf2.f) = 4d8c56f59ea038579bdf3192fe886c19db3bbd6f38c2ecc0f8f73967315300fd
-SIZE (bihar/sradf2.f) = 818
-SHA256 (bihar/sradf3.f) = ea4cf2331724d7485ed9724d78947de79a31db5d9e81caa48bbbce1dd6819c5e
-SIZE (bihar/sradf3.f) = 1278
-SHA256 (bihar/sradf4.f) = af294df48eb26c91150a0dbd3553e3b2bb39548f7f4ca171d713761faefec094
-SIZE (bihar/sradf4.f) = 1885
-SHA256 (bihar/sradf5.f) = ffdfb3cc0c8fd15e388ba72b41b3739e365912a2ff58c97960ed244b5a7922cf
-SIZE (bihar/sradf5.f) = 2483
-SHA256 (bihar/sradfg.f) = 902ff6f12701bd837d4c7d1581c4fa71dd084cc076e2980902f3597f02267949
-SIZE (bihar/sradfg.f) = 4664
-SHA256 (bihar/srfftb.f) = f725f2b079a58478d9f4ae1f316d9fc181245430b3ea38898915f73eb871940c
-SIZE (bihar/srfftb.f) = 172
-SHA256 (bihar/srfftf.f) = 2e0bf201c2a6d85eafa7118192d1181521f19a9729d9f8eafaef0d875925b38e
-SIZE (bihar/srfftf.f) = 172
-SHA256 (bihar/srffti.f) = 2ba467523a60fdfd0b0c9a40531c6555ca329c51be602498c4b41958e28ea2f5
-SIZE (bihar/srffti.f) = 156
-SHA256 (bihar/srftb1.f) = cdba9ed05569c10a3dd3aac2980ef91c99d8622c570a8a4c4044c69f86141ef0
-SIZE (bihar/srftb1.f) = 1711
-SHA256 (bihar/srftf1.f) = 8aac8b204738cac778f12a3f57adbb43b7a6b92a63efc8e6e5aa6e32dc35afa4
-SIZE (bihar/srftf1.f) = 1710
-SHA256 (bihar/srfti1.f) = 18de9c2c62682a1d3c89e0670f7fd6aaabb782cd1abab804fe9f166b1341140a
-SIZE (bihar/srfti1.f) = 1376
-SHA256 (bihar/ssinqb.f) = 1fa1edb9387fcb47c02c9ae1bedb4afaab20eb05ceb65e61502d774a7b8347aa
-SIZE (bihar/ssinqb.f) = 397
-SHA256 (bihar/ssinqf.f) = f636fcc5e9d6f4ce8de5ebee2b3ac8b6fd9e9906c0fba72e62bc9876ba9ea48f
-SIZE (bihar/ssinqf.f) = 358
-SHA256 (bihar/ssinqi.f) = 7bb325f8d14ac5ecf6d9023aad5b4fca37c045c381e545a88a0be4a5dc2bd3e0
-SIZE (bihar/ssinqi.f) = 109
-SHA256 (bihar/ssint.f) = 2dceea4d3efc7c0de2bcc5b16589a10f73869205394aa8cdd576174bf48ea411
-SIZE (bihar/ssint.f) = 863
-SHA256 (bihar/ssinti.f) = 4a47e2f33b605574920c1df2289f6ac3eccb0b0f7398ccc80bc0a73e8ca1439b
-SIZE (bihar/ssinti.f) = 386
-SHA256 (bihar/sstart.f) = 72933cdd319675f83ae297b9489bc7bea762b6bf725edb1e5be64a6d7203b662
-SIZE (bihar/sstart.f) = 1797
-SHA256 (bihar/strigi.f) = 13643ae548d87239fce06c4d0edb257c43fbb1a4d04247cd8463d90ed6bc5ddb
-SIZE (bihar/strigi.f) = 1670
-SHA256 (bihar/supdat.f) = 6687f147d39dfe6ac2ed71ff818bc18305f44e54207470a6da1268750c4f4417
-SIZE (bihar/supdat.f) = 1279
-SHA256 (bihar/fft.doc) = 4feeb50b471fa229aefc5b7ed1c704d9f0e2dc66a43d7cfe26539c75e6ae1d01
-SIZE (bihar/fft.doc) = 27700
diff --git a/math/bihar/files/makefile.lib b/math/bihar/files/makefile.lib
deleted file mode 100644
index fbeae390d106..000000000000
--- a/math/bihar/files/makefile.lib
+++ /dev/null
@@ -1,42 +0,0 @@
-# @(#)Makefile 5.7 (Berkeley) 6/27/91
-
-# FFTPACK sources
-LIBDIR= $(PREFIX)/lib
-NO_PROFILE= no
-
-SHLIB_MAJOR= 2
-SHLIB_MINOR= 0
-LIB=bihar
-SRCS = dbihar.f dbipl.f dbiplr.f dbisld.f dbislf.f dbmult.f dbplrm.f \
- dcfftb.f dcfftf.f dcffti.f dcftb1.f dcftf1.f dcfti1.f dcmult.f \
- dconju.f dcosqb.f dcosqf.f dcosqi.f dcost.f dcosti.f dcsqb1.f \
- dcsqf1.f defft1.f defftb.f defftf.f deffti.f dftrnx.f dftrny.f \
- dhzeri.f dhzero.f dlmult.f dlplrm.f dmatge.f dpentf.f dpmult.f \
- dpplrm.f dpreco.f dpssb.f dpssb2.f dpssb3.f dpssb4.f dpssb5.f \
- dpssf.f dpssf2.f dpssf3.f dpssf4.f dpssf5.f dradb2.f dradb3.f \
- dradb4.f dradb5.f dradbg.f dradf2.f dradf3.f dradf4.f dradf5.f \
- dradfg.f drfftb.f drfftf.f drffti.f drftb1.f drftf1.f drfti1.f \
- dsinqb.f dsinqf.f dsinqi.f dsint.f dsinti.f dstart.f dtrigi.f \
- dupdat.f sbihar.f sbipl.f sbiplr.f sbisld.f sbislf.f sbmult.f \
- sbplrm.f scfftb.f scfftf.f scffti.f scftb1.f scftf1.f scfti1.f \
- scmult.f sconju.f scosqb.f scosqf.f scosqi.f scost.f scosti.f \
- scsqb1.f scsqf1.f sefft1.f sefftb.f sefftf.f seffti.f sftrnx.f \
- sftrny.f shzeri.f shzero.f slmult.f slplrm.f smatge.f spentf.f \
- spmult.f spplrm.f spreco.f spssb.f spssb2.f spssb3.f spssb4.f \
- spssb5.f spssf.f spssf2.f spssf3.f spssf4.f spssf5.f sradb2.f \
- sradb3.f sradb4.f sradb5.f sradbg.f sradf2.f sradf3.f sradf4.f \
- sradf5.f sradfg.f srfftb.f srfftf.f srffti.f srftb1.f srftf1.f \
- srfti1.f ssinqb.f ssinqf.f ssinqi.f ssint.f ssinti.f sstart.f \
- strigi.f supdat.f
-
-CLEANFILES+= *.c
-
-test: test.o
- ${F77} test.o -l$(LIB)
- time a.out
-
-package: install pkg/+DESC pkg/+ONELINE pkg/+PLIST
- pkg_create -c pkg/+ONELINE -d pkg/+DESC -f pkg/+PLIST fftpack_bin
-
-.include <bsd.lib.mk>
-
diff --git a/math/bihar/pkg-descr b/math/bihar/pkg-descr
deleted file mode 100644
index 22083dab395a..000000000000
--- a/math/bihar/pkg-descr
+++ /dev/null
@@ -1,21 +0,0 @@
-/netlib/bihar
- FFTPACK (double precision version)
-
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
-
- The routines in this directory are from netlib/bihar.
- Although, they look like they are derivatives of the following
- package.
-
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
-
- version 4 april 1985
-
-
- This package consists of programs which perform Fast Fourier
- Transforms for both complex and real periodic sequences and
- certain other symmetric sequences.
-
- Paul Swarztrauber, NCAR.
-
- * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
diff --git a/math/bihar/pkg-plist b/math/bihar/pkg-plist
deleted file mode 100644
index d4181dc86bb8..000000000000
--- a/math/bihar/pkg-plist
+++ /dev/null
@@ -1,3 +0,0 @@
-lib/libbihar.a
-lib/libbihar.so
-lib/libbihar.so.2
diff --git a/math/itl/Makefile b/math/itl/Makefile
deleted file mode 100644
index 95959d7d38c1..000000000000
--- a/math/itl/Makefile
+++ /dev/null
@@ -1,32 +0,0 @@
-# Created by: Pedro F. Giffuni <giffunip@asme.org>
-# $FreeBSD$
-
-PORTNAME= itl
-PORTVERSION= 4.0.0.1
-CATEGORIES= math devel
-MASTER_SITES= http://www.osl.iu.edu/download/research/itl/
-DISTNAME= ${PORTNAME}-4.0.0-1
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Iterative Template Library (based on MTL)
-
-BUILD_DEPENDS= ${LOCALBASE}/include/mtl/mtl.h:${PORTSDIR}/math/mtl \
- ${LOCALBASE}/include/blitz/blitz.h:${PORTSDIR}/math/blitz++
-RUN_DEPENDS= ${LOCALBASE}/include/mtl/mtl.h:${PORTSDIR}/math/mtl \
- ${LOCALBASE}/lib/libblitz.a:${PORTSDIR}/math/blitz++
-
-GNU_CONFIGURE= yes
-CONFIGURE_ARGS= --with-mtl=${LOCALBASE}/include \
- --with-blitz=${LOCALBASE}/include
-NO_BUILD= yes
-
-NO_STAGE= yes
-.include <bsd.port.pre.mk>
-
-.if defined(WITH_MPI) || exists(${LOCALBASE}/bin/hcp)
-BUILD_DEPENDS+= ${LOCALBASE}/bin/hcp:${PORTSDIR}/net/lam
-RUN_DEPENDS+= ${LOCALBASE}/bin/hcp:${PORTSDIR}/net/lam
-CONFIGURE_ARGS+=--with-mpi=lam
-.endif
-
-.include <bsd.port.post.mk>
diff --git a/math/itl/distinfo b/math/itl/distinfo
deleted file mode 100644
index e1b6cfee5553..000000000000
--- a/math/itl/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (itl-4.0.0-1.tar.gz) = 2f99f3909c1e8ef167a4e0a8e4e13f4feb56dd8e7101b5876bc84ed37ebd5839
-SIZE (itl-4.0.0-1.tar.gz) = 1265862
diff --git a/math/itl/files/patch-test+iohb_c b/math/itl/files/patch-test+iohb_c
deleted file mode 100644
index 1b72702a66bd..000000000000
--- a/math/itl/files/patch-test+iohb_c
+++ /dev/null
@@ -1,10 +0,0 @@
---- test/iohb.c.orig Mon Aug 18 22:04:00 2003
-+++ test/iohb.c Mon Aug 18 22:04:22 2003
-@@ -219,7 +219,6 @@
- #include<stdlib.h>
- #include<string.h>
- #include<math.h>
--#include<malloc.h>
-
- char* substr(const char* S, const int pos, const int len);
- void upcase(char* S);
diff --git a/math/itl/files/patch-test+mmio_c b/math/itl/files/patch-test+mmio_c
deleted file mode 100644
index 6b6723532abe..000000000000
--- a/math/itl/files/patch-test+mmio_c
+++ /dev/null
@@ -1,11 +0,0 @@
---- test/mmio.c.orig Mon Aug 18 22:04:50 2003
-+++ test/mmio.c Mon Aug 18 22:05:10 2003
-@@ -9,7 +9,7 @@
-
- #include <stdio.h>
- #include <string.h>
--#include <malloc.h>
-+#include <stdlib.h>
- #include <ctype.h>
-
- #include "mmio.h"
diff --git a/math/itl/pkg-descr b/math/itl/pkg-descr
deleted file mode 100644
index d64b6cfd5e10..000000000000
--- a/math/itl/pkg-descr
+++ /dev/null
@@ -1,15 +0,0 @@
- The Iterative Template Library Alpha Release
-
-The Iterative Template Library (ITL) has two parts, iterative solvers
-and preconditioners. ITL provides a collection of sophisticated Krylov
-subspace iterative solvers that use basic linear algebra packages such
-as the Matrix Template Library or Blitz++ for its basic linear algebra
-operations. The ITL has extended many of the ideas of the Iterative
-Methods Library (IML++), to make the library more flexible. The
-"interface" is to specify basic linear algebra operations. See next
-bullet for details. On the other hand, ITL also provides a set of
-preconditioners which are designed for Matrix Template Library.
-
-The latest documentation for ITL can be found on our website:
-
-WWW: http://www.osl.iu.edu/research/itl
diff --git a/math/itl/pkg-plist b/math/itl/pkg-plist
deleted file mode 100644
index cc6c2a402fe8..000000000000
--- a/math/itl/pkg-plist
+++ /dev/null
@@ -1,11 +0,0 @@
-include/itl/Iteration_concept.h
-include/itl/Preconditioner_concept.h
-include/itl/Matrix_concept.h
-include/itl/givens_rotation.h
-include/itl/itl.h
-include/itl/itl_utils.h
-include/itl/itl_tags.h
-include/itl/modified_gram_schmidt.h
-include/itl/matrix_free_operator.h
-include/itl/number_traits.h
-@dirrm include/itl
diff --git a/math/javanns/Makefile b/math/javanns/Makefile
deleted file mode 100644
index 8fd4abda8fdf..000000000000
--- a/math/javanns/Makefile
+++ /dev/null
@@ -1,46 +0,0 @@
-# $FreeBSD$
-
-PORTNAME= javanns
-PORTVERSION= 1.1
-CATEGORIES= math java
-MASTER_SITES= http://www.ra.cs.uni-tuebingen.de/downloads/JavaNNS/
-DISTNAME= JavaNNS-LinuxIntel
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Fully featured neural network simulator
-
-RUN_DEPENDS= ${JAVAVM}:${PORTSDIR}/java/javavmwrapper
-
-ONLY_FOR_ARCHS= i386
-
-JAVAVM?= ${LOCALBASE}/bin/javavm
-CLASSDIR?= ${PREFIX}/share/java/classes
-LIBSDIR?= ${DATADIR}/lib
-
-NO_WRKSUBDIR= yes
-NO_BUILD= yes
-
-NO_STAGE= yes
-post-extract:
- # Permissions in the tar file are whacked
- ${FIND} ${WRKSRC} -type d -print | ${XARGS} ${CHMOD} 755
- ${FIND} ${WRKSRC} -type f -print | ${XARGS} ${CHMOD} 644
-
-do-configure:
- ${INSTALL_DATA} ${FILESDIR}/javanns.sh ${WRKSRC}
- ${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' \
- -e 's|%%DATADIR%%|${DATADIR}|g' \
- -e 's|%%CLASSDIR%%|${CLASSDIR}|g' ${WRKSRC}/javanns.sh
- ${FIND} ${WRKSRC} -type d -print | ${XARGS} ${CHMOD} 0755
-
-do-install:
- ${MKDIR} ${DATADIR} ${LIBSDIR} ${CLASSDIR}
- ${INSTALL_DATA} ${WRKSRC}/JavaNNS.jar ${CLASSDIR}
- ${INSTALL_SCRIPT} ${WRKSRC}/javanns.sh ${PREFIX}/bin/javanns
-.ifndef NOPORTDOCS
- ${MKDIR} ${DOCSDIR}
- ${TAR} -cf - -C${WRKSRC} examples manual |\
- ${TAR} -xf - -C${DOCSDIR}
-.endif
-
-.include <bsd.port.mk>
diff --git a/math/javanns/distinfo b/math/javanns/distinfo
deleted file mode 100644
index 547d8206b721..000000000000
--- a/math/javanns/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (JavaNNS-LinuxIntel.tar.gz) = 8dbe339e5d36ed00dc4a34c8b00ce64cb7f7ac93a2d9fc90b0f5cf442799ffb5
-SIZE (JavaNNS-LinuxIntel.tar.gz) = 2327261
diff --git a/math/javanns/files/javanns.sh b/math/javanns/files/javanns.sh
deleted file mode 100644
index 79d36531d8bc..000000000000
--- a/math/javanns/files/javanns.sh
+++ /dev/null
@@ -1,2 +0,0 @@
-#!/bin/sh
-javavm -Djava.library.path=%%DATADIR%%/lib -jar %%CLASSDIR%%/JavaNNS.jar
diff --git a/math/javanns/pkg-descr b/math/javanns/pkg-descr
deleted file mode 100644
index b2e918d6c7ab..000000000000
--- a/math/javanns/pkg-descr
+++ /dev/null
@@ -1,5 +0,0 @@
-JavaNNS is the next generation of SNNS. It consists of a Java wrapper
-around the SNNS kernel, and a Swing-based GUI for building, training and
-running neural networks.
-
-WWW: http://www-ra.informatik.uni-tuebingen.de/SNNS/
diff --git a/math/javanns/pkg-plist b/math/javanns/pkg-plist
deleted file mode 100644
index bcad821ea2bc..000000000000
--- a/math/javanns/pkg-plist
+++ /dev/null
@@ -1,189 +0,0 @@
-bin/javanns
-%%PORTDOCS%%share/doc/javanns/examples/README.all
-%%PORTDOCS%%share/doc/javanns/examples/art1_letters.README
-%%PORTDOCS%%share/doc/javanns/examples/art1_letters.cfg
-%%PORTDOCS%%share/doc/javanns/examples/art1_letters.net
-%%PORTDOCS%%share/doc/javanns/examples/art1_letters.pat
-%%PORTDOCS%%share/doc/javanns/examples/art1_letters3D.cfg
-%%PORTDOCS%%share/doc/javanns/examples/art2_tetra.README
-%%PORTDOCS%%share/doc/javanns/examples/art2_tetra.cfg
-%%PORTDOCS%%share/doc/javanns/examples/art2_tetra.net
-%%PORTDOCS%%share/doc/javanns/examples/art2_tetra.pat
-%%PORTDOCS%%share/doc/javanns/examples/art2_tetra_high.pat
-%%PORTDOCS%%share/doc/javanns/examples/art2_tetra_low.pat
-%%PORTDOCS%%share/doc/javanns/examples/art2_tetra_med.pat
-%%PORTDOCS%%share/doc/javanns/examples/artmap.README
-%%PORTDOCS%%share/doc/javanns/examples/artmap.cfg
-%%PORTDOCS%%share/doc/javanns/examples/artmap.net
-%%PORTDOCS%%share/doc/javanns/examples/artmap_test.pat
-%%PORTDOCS%%share/doc/javanns/examples/artmap_train.pat
-%%PORTDOCS%%share/doc/javanns/examples/bdg_TDNN.README
-%%PORTDOCS%%share/doc/javanns/examples/bdg_TDNN.cfg
-%%PORTDOCS%%share/doc/javanns/examples/bdg_TDNN.chk
-%%PORTDOCS%%share/doc/javanns/examples/bdg_TDNN.net
-%%PORTDOCS%%share/doc/javanns/examples/bdg_TDNN.pat
-%%PORTDOCS%%share/doc/javanns/examples/bdg_TDNN_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/bdg_variable.pat
-%%PORTDOCS%%share/doc/javanns/examples/default.cfg
-%%PORTDOCS%%share/doc/javanns/examples/dlvq_ziff.README
-%%PORTDOCS%%share/doc/javanns/examples/dlvq_ziff.cfg
-%%PORTDOCS%%share/doc/javanns/examples/dlvq_ziff.chk
-%%PORTDOCS%%share/doc/javanns/examples/dlvq_ziff.net
-%%PORTDOCS%%share/doc/javanns/examples/dlvq_ziff_100.pat
-%%PORTDOCS%%share/doc/javanns/examples/dlvq_ziff_trained.net
-%%PORTDOCS%%share/doc/javanns/examples/dlvq_ziff_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/eight_016.pat
-%%PORTDOCS%%share/doc/javanns/examples/eight_160.pat
-%%PORTDOCS%%share/doc/javanns/examples/eight_elman.README
-%%PORTDOCS%%share/doc/javanns/examples/eight_elman.cfg
-%%PORTDOCS%%share/doc/javanns/examples/eight_elman.chk
-%%PORTDOCS%%share/doc/javanns/examples/eight_elman.net
-%%PORTDOCS%%share/doc/javanns/examples/eight_elman_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/eight_jordan.README
-%%PORTDOCS%%share/doc/javanns/examples/eight_jordan.cfg
-%%PORTDOCS%%share/doc/javanns/examples/eight_jordan.chk
-%%PORTDOCS%%share/doc/javanns/examples/eight_jordan.net
-%%PORTDOCS%%share/doc/javanns/examples/eight_jordan_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/encoder.README
-%%PORTDOCS%%share/doc/javanns/examples/encoder.cfg
-%%PORTDOCS%%share/doc/javanns/examples/encoder.chk
-%%PORTDOCS%%share/doc/javanns/examples/encoder.net
-%%PORTDOCS%%share/doc/javanns/examples/encoder.pat
-%%PORTDOCS%%share/doc/javanns/examples/encoder_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/font.README
-%%PORTDOCS%%share/doc/javanns/examples/font.cfg
-%%PORTDOCS%%share/doc/javanns/examples/font.chk
-%%PORTDOCS%%share/doc/javanns/examples/font.net
-%%PORTDOCS%%share/doc/javanns/examples/font.pat
-%%PORTDOCS%%share/doc/javanns/examples/font_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/laser.README
-%%PORTDOCS%%share/doc/javanns/examples/laser.cfg
-%%PORTDOCS%%share/doc/javanns/examples/laser.chk
-%%PORTDOCS%%share/doc/javanns/examples/laser.net
-%%PORTDOCS%%share/doc/javanns/examples/laser_1000.pat
-%%PORTDOCS%%share/doc/javanns/examples/laser_999.pat
-%%PORTDOCS%%share/doc/javanns/examples/laser_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/letseq.README
-%%PORTDOCS%%share/doc/javanns/examples/letseq.chk
-%%PORTDOCS%%share/doc/javanns/examples/letseq_elman.cfg
-%%PORTDOCS%%share/doc/javanns/examples/letseq_elman.net
-%%PORTDOCS%%share/doc/javanns/examples/letseq_elman_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/letseq_h_elm.cfg
-%%PORTDOCS%%share/doc/javanns/examples/letseq_h_elm.net
-%%PORTDOCS%%share/doc/javanns/examples/letseq_test.pat
-%%PORTDOCS%%share/doc/javanns/examples/letseq_train.pat
-%%PORTDOCS%%share/doc/javanns/examples/letters.README
-%%PORTDOCS%%share/doc/javanns/examples/letters.cfg
-%%PORTDOCS%%share/doc/javanns/examples/letters.chk
-%%PORTDOCS%%share/doc/javanns/examples/letters.net
-%%PORTDOCS%%share/doc/javanns/examples/letters.pat
-%%PORTDOCS%%share/doc/javanns/examples/letters.res
-%%PORTDOCS%%share/doc/javanns/examples/letters3D.cfg
-%%PORTDOCS%%share/doc/javanns/examples/letters3D.net
-%%PORTDOCS%%share/doc/javanns/examples/letters_auto.pat
-%%PORTDOCS%%share/doc/javanns/examples/letters_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/letters_with_classes.pat
-%%PORTDOCS%%share/doc/javanns/examples/nettalk.README
-%%PORTDOCS%%share/doc/javanns/examples/nettalk.cfg
-%%PORTDOCS%%share/doc/javanns/examples/nettalk.net
-%%PORTDOCS%%share/doc/javanns/examples/nettalk.pat
-%%PORTDOCS%%share/doc/javanns/examples/nettalk_thr.net
-%%PORTDOCS%%share/doc/javanns/examples/patmat.README
-%%PORTDOCS%%share/doc/javanns/examples/patmat.cfg
-%%PORTDOCS%%share/doc/javanns/examples/patmat.chk
-%%PORTDOCS%%share/doc/javanns/examples/patmat.net
-%%PORTDOCS%%share/doc/javanns/examples/patmat.pat
-%%PORTDOCS%%share/doc/javanns/examples/patmat_untrained.net
-%%PORTDOCS%%share/doc/javanns/examples/rpropMAP.net
-%%PORTDOCS%%share/doc/javanns/examples/snnsbat1.cfb
-%%PORTDOCS%%share/doc/javanns/examples/snnsbat2.cfb
-%%PORTDOCS%%share/doc/javanns/examples/som_cube.README
-%%PORTDOCS%%share/doc/javanns/examples/som_cube.cfg
-%%PORTDOCS%%share/doc/javanns/examples/som_cube.cont
-%%PORTDOCS%%share/doc/javanns/examples/som_cube.net
-%%PORTDOCS%%share/doc/javanns/examples/som_cube.pat
-%%PORTDOCS%%share/doc/javanns/examples/som_cube_norm.pat
-%%PORTDOCS%%share/doc/javanns/examples/spirals.pat
-%%PORTDOCS%%share/doc/javanns/examples/spirals_dda.README
-%%PORTDOCS%%share/doc/javanns/examples/spirals_dda.cfg
-%%PORTDOCS%%share/doc/javanns/examples/spirals_dda.net
-%%PORTDOCS%%share/doc/javanns/examples/sprach_test.pat
-%%PORTDOCS%%share/doc/javanns/examples/sprach_train.pat
-%%PORTDOCS%%share/doc/javanns/examples/testMAP.pat
-%%PORTDOCS%%share/doc/javanns/examples/trainMAP.pat
-%%PORTDOCS%%share/doc/javanns/examples/trainValidMAP.pat
-%%PORTDOCS%%share/doc/javanns/examples/validMAP.pat
-%%PORTDOCS%%share/doc/javanns/examples/watch.README
-%%PORTDOCS%%share/doc/javanns/examples/watch.cfg
-%%PORTDOCS%%share/doc/javanns/examples/watch.net
-%%PORTDOCS%%share/doc/javanns/examples/watch.pat
-%%PORTDOCS%%share/doc/javanns/examples/watch_2out.README
-%%PORTDOCS%%share/doc/javanns/examples/watch_2out.cfg
-%%PORTDOCS%%share/doc/javanns/examples/watch_2out.net
-%%PORTDOCS%%share/doc/javanns/examples/watch_2out.pat
-%%PORTDOCS%%share/doc/javanns/examples/watch_edge.pgm
-%%PORTDOCS%%share/doc/javanns/examples/watch_edge_invert.pgm
-%%PORTDOCS%%share/doc/javanns/examples/watch_orig.pgm
-%%PORTDOCS%%share/doc/javanns/examples/xor.README
-%%PORTDOCS%%share/doc/javanns/examples/xor.chk
-%%PORTDOCS%%share/doc/javanns/examples/xor.net
-%%PORTDOCS%%share/doc/javanns/examples/xor.pat
-%%PORTDOCS%%share/doc/javanns/examples/xor_rec.cfg
-%%PORTDOCS%%share/doc/javanns/examples/xor_rec.net
-%%PORTDOCS%%share/doc/javanns/examples/xor_rec1.pat
-%%PORTDOCS%%share/doc/javanns/examples/xor_rec2.pat
-%%PORTDOCS%%share/doc/javanns/examples/xor_untrained.net
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-1.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-10.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-11.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-2.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-3.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-4.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-5.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-6.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-7.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-8.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual-9.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual.css
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual.html
-%%PORTDOCS%%share/doc/javanns/manual/JavaNNS-manual.pdf
-%%PORTDOCS%%share/doc/javanns/manual/images/Analyzer.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CasCorr1.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CasCorr2.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CasCorr3.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CasCorr4.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CasCorr5.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CasCorr6.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/ControlPanel1.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/ControlPanel2.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/ControlPanel3.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/ControlPanel4.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/ControlPanel5.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/ControlPanel6.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CreateLayers.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/CreateLinks.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/ErrorGraph.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/File.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/JavaNNS-full.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/LinkWeights.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/Log.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/NetSettings1.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/NetSettings2.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/Network.gif
-%%PORTDOCS%%share/doc/javanns/manual/images/Projection.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/JavaNNS_head.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/SNNS_home.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/arrow.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/nav_buttons.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/nav_buttons_lgrey.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/nav_buttons_rgrey.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/snns_3d.gif
-%%PORTDOCS%%share/doc/javanns/manual/logo/spacer.gif
-share/java/classes/JavaNNS.jar
-@dirrm share/javanns/lib
-@dirrm share/javanns
-%%PORTDOCS%%@dirrm share/doc/javanns/manual/logo
-%%PORTDOCS%%@dirrm share/doc/javanns/manual/images
-%%PORTDOCS%%@dirrm share/doc/javanns/manual
-%%PORTDOCS%%@dirrm share/doc/javanns/examples
-%%PORTDOCS%%@dirrm share/doc/javanns
diff --git a/math/javaview/Makefile b/math/javaview/Makefile
deleted file mode 100644
index 5dafe9ab910a..000000000000
--- a/math/javaview/Makefile
+++ /dev/null
@@ -1,60 +0,0 @@
-# Created by: Nicola Vitale <nivit@email.it>
-# $FreeBSD$
-
-PORTNAME= javaview-lite
-PORTVERSION= 3.95
-PORTREVISION= 2
-CATEGORIES= math java graphics
-MASTER_SITES= http://www.javaview.de/download/data/
-DISTFILES= javaview.zip jv_models.zip jv_tutor.zip
-DIST_SUBDIR= ${PORTNAME}/${PORTVERSION}
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= 3D viewer and a mathematical visualization software
-
-RUN_DEPENDS= bash:${PORTSDIR}/shells/bash
-
-NO_BUILD= yes
-NO_WRKSUBDIR= yes
-
-USES= zip
-USE_JAVA= yes
-
-DATADIR= ${JAVASHAREDIR}/${PORTNAME}
-
-SUB_FILES= pkg-message
-
-SCRIPT= bin/javaview
-FIND_DIRS= \( -type d -not -empty \)
-FIND_DATA= -not -type d
-FIND_EXCLUDE= -not \( -name "*.bat" -or -name "*.bak" -or -name "*.orig" -or -name ".*" -or -name $$(${BASENAME} ${SCRIPT}) -or -name ${SUB_FILES} \)
-
-LINK_OPTS?= -sf
-
-NO_STAGE= yes
-post-patch:
- @${REINPLACE_CMD} -e 's|/bin/bash|${LOCALBASE}/bin/bash|' \
- -e 's|%%DATADIR%%|${DATADIR:S/\//\\\//g}|' \
- -e 's|%%JAVA_HOME%%|${JAVA_HOME:S/\//\\\//g}|' \
- ${WRKSRC}/${SCRIPT};
-
-do-install:
-# Script
- @cd ${WRKSRC}; \
- DIRS=$$(${FIND} . ${FIND_DIRS}); \
- for DIR in $${DIRS}; do \
- ${MKDIR} ${DATADIR}/$${DIR}; \
- done; \
- ${INSTALL_SCRIPT} ${SCRIPT} ${DATADIR}/${SCRIPT}; \
- ${LN} ${LINK_OPTS} ${DATADIR}/${SCRIPT} ${PREFIX}/${SCRIPT};
-# Data
- @cd ${WRKSRC}; \
- DATA=$$(${FIND} . ${FIND_DATA} ${FIND_EXCLUDE}) ; \
- for FILE in $${DATA}; do \
- ${INSTALL_DATA} $${FILE} ${DATADIR}/$${FILE}; \
- done;
-
-post-install:
- @${CAT} ${PKGMESSAGE}
-
-.include <bsd.port.mk>
diff --git a/math/javaview/distinfo b/math/javaview/distinfo
deleted file mode 100644
index 3b6e31d78854..000000000000
--- a/math/javaview/distinfo
+++ /dev/null
@@ -1,6 +0,0 @@
-SHA256 (javaview-lite/3.95/javaview.zip) = ea6ee12e00159b31dca9f8d8875ea4480c0dd3641df20f8618ad372ee2c38187
-SIZE (javaview-lite/3.95/javaview.zip) = 2996982
-SHA256 (javaview-lite/3.95/jv_models.zip) = e4f229cdfe705fecb26752ac83267a2edeec81c1d04e953caacaeb7f01c899a4
-SIZE (javaview-lite/3.95/jv_models.zip) = 5938127
-SHA256 (javaview-lite/3.95/jv_tutor.zip) = c01e48037fb54e3cf0aa777e86870726d89539931764d3c7e4469b1313ec1998
-SIZE (javaview-lite/3.95/jv_tutor.zip) = 485329
diff --git a/math/javaview/files/patch-bin-javaview b/math/javaview/files/patch-bin-javaview
deleted file mode 100644
index 9345034bb9ab..000000000000
--- a/math/javaview/files/patch-bin-javaview
+++ /dev/null
@@ -1,23 +0,0 @@
-
-$FreeBSD$
-
---- bin/javaview Wed Jul 6 23:56:31 2005
-+++ bin/javaview.port Thu Jul 7 00:00:57 2005
-@@ -28,7 +28,7 @@
-
- ## The following directory must contain the java executable "java".
- ## It may be empty or commented out if "java" is found via your PATH variable.
--#JAVA_HOME=/usr/bin
-+JAVA_HOME=%%JAVA_HOME%%
-
- ## Remove the comment char '#' from the line below (keep the underscore!),
- ## if you experience VERY slow performance of JavaView
-@@ -38,7 +38,7 @@
- ## The following directory is the base of your JavaView installation.
- ## Default setting: Location of this script then one directory back up.
- ## You may set it to an absolute path like "/homes/myself/JavaView".
--JAVAVIEW_HOME=`dirname $0`/..
-+JAVAVIEW_HOME=%%DATADIR%%
-
- ## The following directory contains the files "javaview.jar",
- ## and optionally "jvx.jar" and "vgpapp.jar".
diff --git a/math/javaview/files/pkg-message.in b/math/javaview/files/pkg-message.in
deleted file mode 100644
index f7164686476c..000000000000
--- a/math/javaview/files/pkg-message.in
+++ /dev/null
@@ -1,15 +0,0 @@
-
- *********************************************************************
-
- The standalone version of JavaView requires a simple registration
- by filling out the form available at
-
- http://www.javaview.de/download/registration.html
-
- Without a registration JavaView will be fully functional
- but displays a "missing license" statement in the display.
- JavaView applets do not require a license.
-
- (Save the obtained license file as %%DATADIR%%/rsrc/jv-lic.lic)
-
- *********************************************************************
diff --git a/math/javaview/pkg-descr b/math/javaview/pkg-descr
deleted file mode 100644
index 799f53600d89..000000000000
--- a/math/javaview/pkg-descr
+++ /dev/null
@@ -1,7 +0,0 @@
-This tiny version of JavaView is optimized for fast download and contains the
-viewer module only, without any dialogs, inspectors and geometry algorithms.
-
-The lite version is mainly used to display precomputed geometry models inside
-web pages.
-
-WWW: http://www.javaview.de/
diff --git a/math/javaview/pkg-plist b/math/javaview/pkg-plist
deleted file mode 100644
index dbaf6440ad18..000000000000
--- a/math/javaview/pkg-plist
+++ /dev/null
@@ -1,675 +0,0 @@
-bin/javaview
-%%DATADIR%%/_jarVersion.txt
-%%DATADIR%%/bin/javaview
-%%DATADIR%%/bin/vssver.scc
-%%DATADIR%%/deploy/_jarVersion.txt
-%%DATADIR%%/images/AutumnTriangle_fill3_med.jpg
-%%DATADIR%%/images/BlackWhiteTilesRepeat_fill4.gif
-%%DATADIR%%/images/ColorPicker.jpg
-%%DATADIR%%/images/DisplayBackgrd.gif
-%%DATADIR%%/images/EtchedChrome_fill4_med.jpg
-%%DATADIR%%/images/EtchedChrome_frame4_med.gif
-%%DATADIR%%/images/Flecht_fill4.jpg
-%%DATADIR%%/images/Globe.gif
-%%DATADIR%%/images/HexagonalBricks_fill4.jpg
-%%DATADIR%%/images/HolzMatteNoise_fill4.gif
-%%DATADIR%%/images/JavaViewLogo.gif
-%%DATADIR%%/images/JavaViewLogoWide4.gif
-%%DATADIR%%/images/MetallNieten_fill4.jpg
-%%DATADIR%%/images/RedBorderWithBricks_fill4.jpg
-%%DATADIR%%/images/RedBorder_fill4.jpg
-%%DATADIR%%/images/TileIrregularRepeat_fill4.jpg
-%%DATADIR%%/images/Wood_fill4.gif
-%%DATADIR%%/images/ZebraRepeat_fill4.jpg
-%%DATADIR%%/images/jv.ico
-%%DATADIR%%/images/jvBackground.jpg
-%%DATADIR%%/images/jvFrameDefaultOpaque_med.jpg
-%%DATADIR%%/images/jvFrameDefault_sgl.gif
-%%DATADIR%%/images/jvIcon.gif
-%%DATADIR%%/images/jvLaunch.jpg
-%%DATADIR%%/images/jvTextureBlocks.jpg
-%%DATADIR%%/images/jvTextureDijkstra.gif
-%%DATADIR%%/images/jvTextureSquareOpaque_sgl.gif
-%%DATADIR%%/images/jvTextureTriangleOpaque_med.jpg
-%%DATADIR%%/images/jvTextureTriangleTransp_med.gif
-%%DATADIR%%/images/pspbrwse.jbf
-%%DATADIR%%/images/vssver.scc
-%%DATADIR%%/jars/browserProps.html
-%%DATADIR%%/jars/contact.html
-%%DATADIR%%/jars/copyright.html
-%%DATADIR%%/jars/help.html
-%%DATADIR%%/jars/javaview.jar
-%%DATADIR%%/jars/jvLite.jar
-%%DATADIR%%/jars/jvx.jar
-%%DATADIR%%/jars/jvxGeom.jar
-%%DATADIR%%/jars/mac.html
-%%DATADIR%%/jars/requirements.html
-%%DATADIR%%/jars/shortcuts.html
-%%DATADIR%%/jars/systemFonts.html
-%%DATADIR%%/jars/vgpapp.jar
-%%DATADIR%%/javaview.html
-%%DATADIR%%/jvLite.html
-%%DATADIR%%/models/_modelAllList.xml
-%%DATADIR%%/models/_modelList.xml
-%%DATADIR%%/models/animation/_modelList.xml
-%%DATADIR%%/models/animation/flow.1.jvx
-%%DATADIR%%/models/animation/flow.2.jvx
-%%DATADIR%%/models/animation/flow.3.jvx
-%%DATADIR%%/models/animation/flowAnim.jvd
-%%DATADIR%%/models/animation/sinAnim.mpl
-%%DATADIR%%/models/bd/4noid.bd
-%%DATADIR%%/models/bd/Cube.bd
-%%DATADIR%%/models/bd/Cube_soap.bd
-%%DATADIR%%/models/bd/F-Rd.bd
-%%DATADIR%%/models/bd/Genus.bd
-%%DATADIR%%/models/bd/Gergonne.bd
-%%DATADIR%%/models/bd/GergonneFine.bd
-%%DATADIR%%/models/bd/Graph_10.bd
-%%DATADIR%%/models/bd/Graph_30.bd
-%%DATADIR%%/models/bd/Graph_5.bd
-%%DATADIR%%/models/bd/I-Wp.bd
-%%DATADIR%%/models/bd/Neovius.bd
-%%DATADIR%%/models/bd/Octo.bd
-%%DATADIR%%/models/bd/PlaneTest.bd
-%%DATADIR%%/models/bd/Scherk.bd
-%%DATADIR%%/models/bd/Scherk_hdl.bd
-%%DATADIR%%/models/bd/Schwarz_FreeBnd.bd
-%%DATADIR%%/models/bd/Triple.bd
-%%DATADIR%%/models/bd/Wing.bd
-%%DATADIR%%/models/bd/_modelList.xml
-%%DATADIR%%/models/byu/Brezel_13824.byu
-%%DATADIR%%/models/byu/Brezel_1920.byu
-%%DATADIR%%/models/byu/Brezel_480.byu
-%%DATADIR%%/models/byu/Brezel_96.byu
-%%DATADIR%%/models/byu/Cow_100.byu
-%%DATADIR%%/models/byu/Cow_250.byu
-%%DATADIR%%/models/byu/Cow_400.byu
-%%DATADIR%%/models/byu/Cow_5804.byu
-%%DATADIR%%/models/byu/Cow_88.byu
-%%DATADIR%%/models/byu/Gauss_1152.byu
-%%DATADIR%%/models/byu/Gauss_200.byu
-%%DATADIR%%/models/byu/Gauss_3042.byu
-%%DATADIR%%/models/byu/Gauss_8.byu
-%%DATADIR%%/models/byu/Genus1_Helicoid3.byu
-%%DATADIR%%/models/byu/Pseudosphere_400.byu
-%%DATADIR%%/models/byu/RoundedCone_1128.byu
-%%DATADIR%%/models/byu/WeirdTriangle.byu
-%%DATADIR%%/models/byu/_modelList.xml
-%%DATADIR%%/models/byu/hyperboloid.byu
-%%DATADIR%%/models/cmc/Lawson_3_90_60_Anim.1.byu
-%%DATADIR%%/models/cmc/Lawson_3_90_60_Anim.2.byu
-%%DATADIR%%/models/cmc/Lawson_3_90_60_Anim.3.byu
-%%DATADIR%%/models/cmc/Lawson_3_90_60_Anim.4.byu
-%%DATADIR%%/models/cmc/Lawson_3_90_60_Anim.5.byu
-%%DATADIR%%/models/cmc/Quadro_Fund.byu
-%%DATADIR%%/models/cmc/Wente_Anim.1.byu
-%%DATADIR%%/models/cmc/Wente_Anim.2.byu
-%%DATADIR%%/models/cmc/Wente_Fund1.byu
-%%DATADIR%%/models/cmc/Wente_Fund2.byu
-%%DATADIR%%/models/cmc/Wente_Fund3.byu
-%%DATADIR%%/models/cmc/Wente_Fund4.byu
-%%DATADIR%%/models/cmc/Wente_Fund5.byu
-%%DATADIR%%/models/cmc/_modelList.xml
-%%DATADIR%%/models/cmc/penta_segment.byu
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-%%DATADIR%%/vgp/tutor/lsystem/PaLSystem.html
-%%DATADIR%%/vgp/tutor/lsystem/PaLSystem.java
-%%DATADIR%%/vgp/tutor/lsystem/PjLSystem.java
-%%DATADIR%%/vgp/tutor/lsystem/PjLSystem_IP.java
-%%DATADIR%%/vgp/tutor/lsystem/package.html
-%%DATADIR%%/vgp/tutor/model/PaModel.html
-%%DATADIR%%/vgp/tutor/model/PaModel.java
-%%DATADIR%%/vgp/tutor/model/PjModel.java
-%%DATADIR%%/vgp/tutor/model/PjModel_IP.java
-%%DATADIR%%/vgp/tutor/model/package.html
-%%DATADIR%%/vgp/tutor/ode/PaExprOde.html
-%%DATADIR%%/vgp/tutor/ode/PaExprOde.java
-%%DATADIR%%/vgp/tutor/ode/PjExprOde.java
-%%DATADIR%%/vgp/tutor/ode/PjExprOde_IP.java
-%%DATADIR%%/vgp/tutor/ode/package.html
-%%DATADIR%%/vgp/tutor/parm/PaParmSurface.html
-%%DATADIR%%/vgp/tutor/parm/PaParmSurface.java
-%%DATADIR%%/vgp/tutor/parm/PjParmSurface.java
-%%DATADIR%%/vgp/tutor/parm/PjParmSurface_IP.java
-%%DATADIR%%/vgp/tutor/parm/package.html
-%%DATADIR%%/vgp/tutor/parmCurve/PaParmCurve.html
-%%DATADIR%%/vgp/tutor/parmCurve/PaParmCurve.java
-%%DATADIR%%/vgp/tutor/parmCurve/PjParmCurve.java
-%%DATADIR%%/vgp/tutor/parmCurve/PjParmCurve_IP.java
-%%DATADIR%%/vgp/tutor/parmCurve/package.html
-%%DATADIR%%/vgp/tutor/pick/PaPickEvent.html
-%%DATADIR%%/vgp/tutor/pick/PaPickEvent.java
-%%DATADIR%%/vgp/tutor/pick/PjPickEvent.java
-%%DATADIR%%/vgp/tutor/pick/PjPickEvent_IP.java
-%%DATADIR%%/vgp/tutor/pick/package.html
-%%DATADIR%%/vgp/tutor/polygonSet/PaPolygonSet.html
-%%DATADIR%%/vgp/tutor/polygonSet/PaPolygonSet.java
-%%DATADIR%%/vgp/tutor/polygonSet/PjPolygonSet.java
-%%DATADIR%%/vgp/tutor/polygonSet/package.html
-%%DATADIR%%/vgp/tutor/rivara/PaRivara.html
-%%DATADIR%%/vgp/tutor/rivara/PaRivara.java
-%%DATADIR%%/vgp/tutor/rivara/PjRivara.java
-%%DATADIR%%/vgp/tutor/rivara/PjRivara_IP.java
-%%DATADIR%%/vgp/tutor/rivara/package.html
-%%DATADIR%%/vgp/tutor/rootFinder/PaRootFinder.html
-%%DATADIR%%/vgp/tutor/rootFinder/PaRootFinder.java
-%%DATADIR%%/vgp/tutor/rootFinder/PjRootFinder.java
-%%DATADIR%%/vgp/tutor/rootFinder/PjRootFinder_IP.java
-%%DATADIR%%/vgp/tutor/rootFinder/package.html
-%%DATADIR%%/vgp/tutor/ruler/PaRuler.html
-%%DATADIR%%/vgp/tutor/ruler/PaRuler.java
-%%DATADIR%%/vgp/tutor/ruler/PjRuler.java
-%%DATADIR%%/vgp/tutor/ruler/PjRuler_IP.java
-%%DATADIR%%/vgp/tutor/ruler/package.html
-%%DATADIR%%/vgp/tutor/slider/PaSlider.html
-%%DATADIR%%/vgp/tutor/slider/PaSlider.java
-%%DATADIR%%/vgp/tutor/slider/PjSlider.java
-%%DATADIR%%/vgp/tutor/slider/PjSlider_IP.java
-%%DATADIR%%/vgp/tutor/slider/package.html
-%%DATADIR%%/vgp/tutor/subdivision/PaSubdivision.html
-%%DATADIR%%/vgp/tutor/subdivision/PaSubdivision.java
-%%DATADIR%%/vgp/tutor/subdivision/PjSubdivision.java
-%%DATADIR%%/vgp/tutor/subdivision/package.html
-%%DATADIR%%/vgp/tutor/texture/PaTextureCube.java
-%%DATADIR%%/vgp/tutor/texture/PaTexturedSurface.html
-%%DATADIR%%/vgp/tutor/texture/PaTexturedSurface.java
-%%DATADIR%%/vgp/tutor/texture/PjTextureCube.java
-%%DATADIR%%/vgp/tutor/texture/PjTexturedSurface.java
-%%DATADIR%%/vgp/tutor/texture/PjTexturedSurface_IP.java
-%%DATADIR%%/vgp/tutor/texture/images/Auge.jpg
-%%DATADIR%%/vgp/tutor/texture/images/City2.jpg
-%%DATADIR%%/vgp/tutor/texture/images/CubeFlow.jpg
-%%DATADIR%%/vgp/tutor/texture/images/Himmel.jpg
-%%DATADIR%%/vgp/tutor/texture/images/Leuchte.jpg
-%%DATADIR%%/vgp/tutor/texture/images/T_Rex.jpg
-%%DATADIR%%/vgp/tutor/texture/images/Water.jpg
-%%DATADIR%%/vgp/tutor/texture/package.html
-%%DATADIR%%/vgp/tutor/torusknot/PaTorusKnot.html
-%%DATADIR%%/vgp/tutor/torusknot/PaTorusKnot.java
-%%DATADIR%%/vgp/tutor/torusknot/PjTorusKnot.java
-%%DATADIR%%/vgp/tutor/torusknot/PjTorusKnot_IP.java
-%%DATADIR%%/vgp/tutor/torusknot/package.html
-%%DATADIR%%/vgp/tutor/transform/PaTransform.html
-%%DATADIR%%/vgp/tutor/transform/PaTransform.java
-%%DATADIR%%/vgp/tutor/transform/PjTransform.java
-%%DATADIR%%/vgp/tutor/transform/PjTransform_IP.java
-%%DATADIR%%/vgp/tutor/transform/package.html
-%%DATADIR%%/vgp/tutor/updatePanel/MyClass.java
-%%DATADIR%%/vgp/tutor/updatePanel/MyClass_IP.java
-%%DATADIR%%/vgp/tutor/updatePanel/package.html
-%%DATADIR%%/vgp/tutor/vectorField/PaVectorField.html
-%%DATADIR%%/vgp/tutor/vectorField/PaVectorField.java
-%%DATADIR%%/vgp/tutor/vectorField/PjVectorField.java
-%%DATADIR%%/vgp/tutor/vectorField/PjVectorField_IP.java
-%%DATADIR%%/vgp/tutor/vectorField/package.html
-@dirrm %%DATADIR%%/bin
-@dirrm %%DATADIR%%/deploy
-@dirrm %%DATADIR%%/images
-@dirrm %%DATADIR%%/jars
-@dirrm %%DATADIR%%/models/animation
-@dirrm %%DATADIR%%/models/bd
-@dirrm %%DATADIR%%/models/byu
-@dirrm %%DATADIR%%/models/cmc
-@dirrm %%DATADIR%%/models/contour
-@dirrm %%DATADIR%%/models/curves
-@dirrm %%DATADIR%%/models/display
-@dirrm %%DATADIR%%/models/diverse
-@dirrm %%DATADIR%%/models/dxf
-@dirrm %%DATADIR%%/models/fe
-@dirrm %%DATADIR%%/models/fractal
-@dirrm %%DATADIR%%/models/graph
-@dirrm %%DATADIR%%/models/jvd
-@dirrm %%DATADIR%%/models/jvx
-@dirrm %%DATADIR%%/models/knots
-@dirrm %%DATADIR%%/models/maple
-@dirrm %%DATADIR%%/models/math
-@dirrm %%DATADIR%%/models/minimal
-@dirrm %%DATADIR%%/models/numeric
-@dirrm %%DATADIR%%/models/obj
-@dirrm %%DATADIR%%/models/off
-@dirrm %%DATADIR%%/models/polytope
-@dirrm %%DATADIR%%/models/primitive
-@dirrm %%DATADIR%%/models/sample
-@dirrm %%DATADIR%%/models/stl
-@dirrm %%DATADIR%%/models/surfaces
-@dirrm %%DATADIR%%/models/texture
-@dirrm %%DATADIR%%/models/unfold
-@dirrm %%DATADIR%%/models/vector
-@dirrm %%DATADIR%%/models/wrl
-@dirrm %%DATADIR%%/models/xyz
-@dirrm %%DATADIR%%/models
-@dirrm %%DATADIR%%/rsrc
-@dirrm %%DATADIR%%/vgp/tutor/animationPanel
-@dirrm %%DATADIR%%/vgp/tutor/color
-@dirrm %%DATADIR%%/vgp/tutor/displaySettings
-@dirrm %%DATADIR%%/vgp/tutor/domain
-@dirrm %%DATADIR%%/vgp/tutor/eventCamera
-@dirrm %%DATADIR%%/vgp/tutor/expr
-@dirrm %%DATADIR%%/vgp/tutor/firstApplet
-@dirrm %%DATADIR%%/vgp/tutor/firstApplication
-@dirrm %%DATADIR%%/vgp/tutor/firstGraph
-@dirrm %%DATADIR%%/vgp/tutor/firstProject
-@dirrm %%DATADIR%%/vgp/tutor/fractal
-@dirrm %%DATADIR%%/vgp/tutor/height
-@dirrm %%DATADIR%%/vgp/tutor/key
-@dirrm %%DATADIR%%/vgp/tutor/linear
-@dirrm %%DATADIR%%/vgp/tutor/loader
-@dirrm %%DATADIR%%/vgp/tutor/lsystem
-@dirrm %%DATADIR%%/vgp/tutor/model
-@dirrm %%DATADIR%%/vgp/tutor/ode
-@dirrm %%DATADIR%%/vgp/tutor/parm
-@dirrm %%DATADIR%%/vgp/tutor/parmCurve
-@dirrm %%DATADIR%%/vgp/tutor/pick
-@dirrm %%DATADIR%%/vgp/tutor/polygonSet
-@dirrm %%DATADIR%%/vgp/tutor/rivara
-@dirrm %%DATADIR%%/vgp/tutor/rootFinder
-@dirrm %%DATADIR%%/vgp/tutor/ruler
-@dirrm %%DATADIR%%/vgp/tutor/slider
-@dirrm %%DATADIR%%/vgp/tutor/subdivision
-@dirrm %%DATADIR%%/vgp/tutor/texture/images
-@dirrm %%DATADIR%%/vgp/tutor/texture
-@dirrm %%DATADIR%%/vgp/tutor/torusknot
-@dirrm %%DATADIR%%/vgp/tutor/transform
-@dirrm %%DATADIR%%/vgp/tutor/updatePanel
-@dirrm %%DATADIR%%/vgp/tutor/vectorField
-@dirrm %%DATADIR%%/vgp/tutor
-@dirrm %%DATADIR%%/vgp
-@dirrm %%DATADIR%%
diff --git a/math/jsmath-fonts-sprite/Makefile b/math/jsmath-fonts-sprite/Makefile
deleted file mode 100644
index cdab2b09d491..000000000000
--- a/math/jsmath-fonts-sprite/Makefile
+++ /dev/null
@@ -1,32 +0,0 @@
-# Created by: Nicola Vitale <nivit@email.it>
-# $FreeBSD$
-
-PORTNAME= jsMath-fonts-sprite
-PORTVERSION= 1.0
-CATEGORIES= math www
-MASTER_SITES= http://www.math.union.edu/~dpvc/jsMath/download/ \
- http://nivi.interfree.it/distfiles/${PORTNAME}/
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Sprite fonts pack for jsMath
-
-USES= zip
-NO_BUILD= yes
-WRKSRC= ${WRKDIR}
-WWWDIR?= ${PREFIX}/www/jsMath
-
-.for _i in bx ex mi r sy ti
-PLIST_SUB+= D${_i}a=${WWWDIR_REL}/fonts-sprite/cm${_i}10/alpha
-PLIST_SUB+= D${_i}p=${WWWDIR_REL}/fonts-sprite/cm${_i}10/plain
-PLIST_SUB+= D${_i}j=${WWWDIR_REL}/fonts-sprite/cm${_i}10
-.endfor
-PLIST_SUB+= Dcmj=${WWWDIR_REL}/fonts-sprite/cm-fonts
-
-NO_STAGE= yes
-do-install:
- @${INSTALL} -d ${WWWDIR}/fonts-sprite
- @${CP} -Rp ${WRKSRC}/fonts-sprite ${WWWDIR}
- @${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${WWWDIR}/fonts-sprite
- @${CHMOD} -R go-w ${WWWDIR}/fonts-sprite
-
-.include <bsd.port.mk>
diff --git a/math/jsmath-fonts-sprite/distinfo b/math/jsmath-fonts-sprite/distinfo
deleted file mode 100644
index 3482c5b76abc..000000000000
--- a/math/jsmath-fonts-sprite/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (jsMath-fonts-sprite-1.0.zip) = 39b2d106db68782c53427390e76bc60cabd337c3b5bfc44f8f4ed1df0775d427
-SIZE (jsMath-fonts-sprite-1.0.zip) = 3206919
diff --git a/math/jsmath-fonts-sprite/pkg-descr b/math/jsmath-fonts-sprite/pkg-descr
deleted file mode 100644
index 2fcb6d0d714b..000000000000
--- a/math/jsmath-fonts-sprite/pkg-descr
+++ /dev/null
@@ -1,4 +0,0 @@
-Optional jsMath fonts for the sprite-image-fonts plugin
-
-Author: Davide P. Cervone
-WWW: http://www.math.union.edu/~dpvc/jsMath/authors/spriteImageFonts.html
diff --git a/math/jsmath-fonts-sprite/pkg-plist b/math/jsmath-fonts-sprite/pkg-plist
deleted file mode 100644
index 26f8aca2e5be..000000000000
--- a/math/jsmath-fonts-sprite/pkg-plist
+++ /dev/null
@@ -1,184 +0,0 @@
-%%Dcmj%%/font.js
-%%Dbxa%%/100.png
-%%Dbxa%%/120.png
-%%Dbxa%%/144.png
-%%Dbxa%%/173.png
-%%Dbxa%%/207.png
-%%Dbxa%%/249.png
-%%Dbxa%%/298.png
-%%Dbxa%%/358.png
-%%Dbxa%%/430.png
-%%Dbxa%%/50.png
-%%Dbxa%%/60.png
-%%Dbxa%%/70.png
-%%Dbxa%%/85.png
-%%Dbxj%%/font.js
-%%Dbxp%%/100.png
-%%Dbxp%%/120.png
-%%Dbxp%%/144.png
-%%Dbxp%%/173.png
-%%Dbxp%%/207.png
-%%Dbxp%%/249.png
-%%Dbxp%%/298.png
-%%Dbxp%%/358.png
-%%Dbxp%%/430.png
-%%Dbxp%%/50.png
-%%Dbxp%%/60.png
-%%Dbxp%%/70.png
-%%Dbxp%%/85.png
-%%Dexa%%/100.png
-%%Dexa%%/120.png
-%%Dexa%%/144.png
-%%Dexa%%/173.png
-%%Dexa%%/207.png
-%%Dexa%%/249.png
-%%Dexa%%/298.png
-%%Dexa%%/358.png
-%%Dexa%%/430.png
-%%Dexa%%/50.png
-%%Dexa%%/60.png
-%%Dexa%%/70.png
-%%Dexa%%/85.png
-%%Dexj%%/font.js
-%%Dexp%%/100.png
-%%Dexp%%/120.png
-%%Dexp%%/144.png
-%%Dexp%%/173.png
-%%Dexp%%/207.png
-%%Dexp%%/249.png
-%%Dexp%%/298.png
-%%Dexp%%/358.png
-%%Dexp%%/430.png
-%%Dexp%%/50.png
-%%Dexp%%/60.png
-%%Dexp%%/70.png
-%%Dexp%%/85.png
-%%Dmia%%/100.png
-%%Dmia%%/120.png
-%%Dmia%%/144.png
-%%Dmia%%/173.png
-%%Dmia%%/207.png
-%%Dmia%%/249.png
-%%Dmia%%/298.png
-%%Dmia%%/358.png
-%%Dmia%%/430.png
-%%Dmia%%/50.png
-%%Dmia%%/60.png
-%%Dmia%%/70.png
-%%Dmia%%/85.png
-%%Dmij%%/font.js
-%%Dmip%%/100.png
-%%Dmip%%/120.png
-%%Dmip%%/144.png
-%%Dmip%%/173.png
-%%Dmip%%/207.png
-%%Dmip%%/249.png
-%%Dmip%%/298.png
-%%Dmip%%/358.png
-%%Dmip%%/430.png
-%%Dmip%%/50.png
-%%Dmip%%/60.png
-%%Dmip%%/70.png
-%%Dmip%%/85.png
-%%Dra%%/100.png
-%%Dra%%/120.png
-%%Dra%%/144.png
-%%Dra%%/173.png
-%%Dra%%/207.png
-%%Dra%%/249.png
-%%Dra%%/298.png
-%%Dra%%/358.png
-%%Dra%%/430.png
-%%Dra%%/50.png
-%%Dra%%/60.png
-%%Dra%%/70.png
-%%Dra%%/85.png
-%%Drj%%/font.js
-%%Drp%%/100.png
-%%Drp%%/120.png
-%%Drp%%/144.png
-%%Drp%%/173.png
-%%Drp%%/207.png
-%%Drp%%/249.png
-%%Drp%%/298.png
-%%Drp%%/358.png
-%%Drp%%/430.png
-%%Drp%%/50.png
-%%Drp%%/60.png
-%%Drp%%/70.png
-%%Drp%%/85.png
-%%Dsya%%/100.png
-%%Dsya%%/120.png
-%%Dsya%%/144.png
-%%Dsya%%/173.png
-%%Dsya%%/207.png
-%%Dsya%%/249.png
-%%Dsya%%/298.png
-%%Dsya%%/358.png
-%%Dsya%%/430.png
-%%Dsya%%/50.png
-%%Dsya%%/60.png
-%%Dsya%%/70.png
-%%Dsya%%/85.png
-%%Dsyj%%/font.js
-%%Dsyp%%/100.png
-%%Dsyp%%/120.png
-%%Dsyp%%/144.png
-%%Dsyp%%/173.png
-%%Dsyp%%/207.png
-%%Dsyp%%/249.png
-%%Dsyp%%/298.png
-%%Dsyp%%/358.png
-%%Dsyp%%/430.png
-%%Dsyp%%/50.png
-%%Dsyp%%/60.png
-%%Dsyp%%/70.png
-%%Dsyp%%/85.png
-%%Dtia%%/100.png
-%%Dtia%%/120.png
-%%Dtia%%/144.png
-%%Dtia%%/173.png
-%%Dtia%%/207.png
-%%Dtia%%/249.png
-%%Dtia%%/298.png
-%%Dtia%%/358.png
-%%Dtia%%/430.png
-%%Dtia%%/50.png
-%%Dtia%%/60.png
-%%Dtia%%/70.png
-%%Dtia%%/85.png
-%%Dtij%%/font.js
-%%Dtip%%/100.png
-%%Dtip%%/120.png
-%%Dtip%%/144.png
-%%Dtip%%/173.png
-%%Dtip%%/207.png
-%%Dtip%%/249.png
-%%Dtip%%/298.png
-%%Dtip%%/358.png
-%%Dtip%%/430.png
-%%Dtip%%/50.png
-%%Dtip%%/60.png
-%%Dtip%%/70.png
-%%Dtip%%/85.png
-@dirrm %%Dcmj%%
-@dirrm %%Dbxa%%
-@dirrm %%Dbxp%%
-@dirrm %%Dbxj%%
-@dirrm %%Dexa%%
-@dirrm %%Dexp%%
-@dirrm %%Dexj%%
-@dirrm %%Dmia%%
-@dirrm %%Dmip%%
-@dirrm %%Dmij%%
-@dirrm %%Dra%%
-@dirrm %%Drp%%
-@dirrm %%Drj%%
-@dirrm %%Dsya%%
-@dirrm %%Dsyp%%
-@dirrm %%Dsyj%%
-@dirrm %%Dtia%%
-@dirrm %%Dtip%%
-@dirrm %%Dtij%%
-@dirrmtry %%WWWDIR%%/fonts-sprite
-@dirrmtry %%WWWDIR%%
diff --git a/math/jsmath/Makefile b/math/jsmath/Makefile
deleted file mode 100644
index 7604df4c6dec..000000000000
--- a/math/jsmath/Makefile
+++ /dev/null
@@ -1,40 +0,0 @@
-# Created by: Nicola Vitale <nivit@email.it>
-# $FreeBSD$
-
-PORTNAME= jsMath
-DISTVERSION= 3.6e
-CATEGORIES= math www
-MASTER_SITES= SF/${PORTNAME:tl}/${PORTNAME}/${DISTVERSION}
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= JavaScript tool for including mathematics in web pages
-
-USES= zip
-NO_BUILD= yes
-
-OPTIONS_DEFINE= IMAGE_FONTS SPRITE_FONTS
-OPTIONS_DEFAULT= IMAGE_FONTS
-IMAGE_FONTS_DESC= Image fonts
-SPRITE_FONTS_DESC= Sprite fonts
-
-NO_STAGE= yes
-.include <bsd.port.pre.mk>
-
-.if ${PORT_OPTIONS:MIMAGE_FONTS}
-RUN_DEPENDS+= ${WWWDIR}/fonts/cm-fonts/alpha/def.js:${PORTSDIR}/math/jsmath-fonts
-.endif
-.if ${PORT_OPTIONS:MSPRITE_FONTS}
-RUN_DEPENDS+= ${WWWDIR}/fonts-sprite/cm-fonts/font.js:${PORTSDIR}/math/jsmath-fonts-sprite
-.endif
-
-post-extract:
- @${RM} ${WRKSRC}/COPYING.txt
- @${FIND} -d ${WRKSRC} -type d -name "CVS" -exec ${RM} -R {} ";"
-
-do-install:
- @${INSTALL} -d ${WWWDIR}
- @${CP} -Rp ${WRKSRC}/ ${WWWDIR}/
- @${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${WWWDIR}/
- @${CHMOD} -R go-w ${WWWDIR}/
-
-.include <bsd.port.post.mk>
diff --git a/math/jsmath/distinfo b/math/jsmath/distinfo
deleted file mode 100644
index 8c8a21310e45..000000000000
--- a/math/jsmath/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (jsMath-3.6e.zip) = 0f5a37d7569e600f42d06bb265f1984eec73247ba883b52c26d472db1f96be18
-SIZE (jsMath-3.6e.zip) = 291114
diff --git a/math/jsmath/pkg-descr b/math/jsmath/pkg-descr
deleted file mode 100644
index 59450e4714f7..000000000000
--- a/math/jsmath/pkg-descr
+++ /dev/null
@@ -1,16 +0,0 @@
-The jsMath package provides a method of including mathematics in HTML pages
-that works across multiple browsers under Windows, Macintosh OS X, Linux and
-other flavors of unix. jsMath uses native fonts, so they resize when you
-change the size of the text in your browser, they print at the full resolution
-of your printer, and you don't have to wait for dozens of images to be
-downloaded in order to see the mathematics in a web page. There are also
-advantages for web-page authors, as there is no need to preprocess your
-web pages to generate any images, and the mathematics is entered in TeX form,
-so it is easy to create and maintain your web pages.
-
-Although it works best with the TeX fonts installed, jsMath will fall back
-on a collection of image-based fonts (which can still be scaled or printed
-at high resolution) or unicode fonts when the TeX fonts are not available.
-
-Author: Davide P. Cervone
-WWW: http://www.math.union.edu/~dpvc/jsMath/
diff --git a/math/jsmath/pkg-plist b/math/jsmath/pkg-plist
deleted file mode 100644
index d866541d298b..000000000000
--- a/math/jsmath/pkg-plist
+++ /dev/null
@@ -1,66 +0,0 @@
-%%WWWDIR%%/blank.gif
-%%WWWDIR%%/easy/load.js
-%%WWWDIR%%/extensions/AMSmath.js
-%%WWWDIR%%/extensions/AMSsymbols.js
-%%WWWDIR%%/extensions/HTML.js
-%%WWWDIR%%/extensions/autobold.js
-%%WWWDIR%%/extensions/bbox.js
-%%WWWDIR%%/extensions/boldsymbol.js
-%%WWWDIR%%/extensions/double-click.js
-%%WWWDIR%%/extensions/eqn-number.js
-%%WWWDIR%%/extensions/fbox.js
-%%WWWDIR%%/extensions/font.js
-%%WWWDIR%%/extensions/leaders.js
-%%WWWDIR%%/extensions/mathchoice.js
-%%WWWDIR%%/extensions/mimeTeX.js
-%%WWWDIR%%/extensions/moreArrows.js
-%%WWWDIR%%/extensions/newcommand.js
-%%WWWDIR%%/extensions/underset-overset.js
-%%WWWDIR%%/extensions/verb.js
-%%WWWDIR%%/jsMath-BaKoMa-fonts.js
-%%WWWDIR%%/jsMath-autoload.html
-%%WWWDIR%%/jsMath-controls.html
-%%WWWDIR%%/jsMath-easy-load.js
-%%WWWDIR%%/jsMath-fallback-mac-mozilla.js
-%%WWWDIR%%/jsMath-fallback-mac-msie.js
-%%WWWDIR%%/jsMath-fallback-mac.js
-%%WWWDIR%%/jsMath-fallback-pc.js
-%%WWWDIR%%/jsMath-fallback-symbols.js
-%%WWWDIR%%/jsMath-fallback-unix.js
-%%WWWDIR%%/jsMath-global-controls.html
-%%WWWDIR%%/jsMath-global.html
-%%WWWDIR%%/jsMath-loader-omniweb4.js
-%%WWWDIR%%/jsMath-loader-post.html
-%%WWWDIR%%/jsMath-loader.html
-%%WWWDIR%%/jsMath-msie-mac.js
-%%WWWDIR%%/jsMath-old-browsers.js
-%%WWWDIR%%/jsMath.js
-%%WWWDIR%%/local/macros.js
-%%WWWDIR%%/plugins/CHMmode.js
-%%WWWDIR%%/plugins/autoload.js
-%%WWWDIR%%/plugins/global.js
-%%WWWDIR%%/plugins/mimeTeX.js
-%%WWWDIR%%/plugins/noCache.js
-%%WWWDIR%%/plugins/noGlobal.js
-%%WWWDIR%%/plugins/noImageFonts.js
-%%WWWDIR%%/plugins/smallFonts.js
-%%WWWDIR%%/plugins/spriteImageFonts.js
-%%WWWDIR%%/plugins/tex2math.js
-%%WWWDIR%%/test/index-images.html
-%%WWWDIR%%/test/index.html
-%%WWWDIR%%/test/jsMath40.jpg
-%%WWWDIR%%/test/sample.html
-%%WWWDIR%%/uncompressed/def.js
-%%WWWDIR%%/uncompressed/font.js
-%%WWWDIR%%/uncompressed/jsMath-fallback-mac.js
-%%WWWDIR%%/uncompressed/jsMath-fallback-pc.js
-%%WWWDIR%%/uncompressed/jsMath-fallback-symbols.js
-%%WWWDIR%%/uncompressed/jsMath-fallback-unix.js
-%%WWWDIR%%/uncompressed/jsMath.js
-@dirrm %%WWWDIR%%/uncompressed
-@dirrm %%WWWDIR%%/test
-@dirrm %%WWWDIR%%/plugins
-@dirrm %%WWWDIR%%/local
-@dirrm %%WWWDIR%%/extensions
-@dirrm %%WWWDIR%%/easy
-@dirrm %%WWWDIR%%
diff --git a/math/kash3/Makefile b/math/kash3/Makefile
deleted file mode 100644
index 1734f2013663..000000000000
--- a/math/kash3/Makefile
+++ /dev/null
@@ -1,70 +0,0 @@
-# Created by: Nicola Vitale <nivit@email.it>
-# $FreeBSD$
-
-PORTNAME= kash3
-PORTVERSION= 2008.07.31
-CATEGORIES= math
-MASTER_SITES= ftp://ftp.math.tu-berlin.de/pub/algebra/Kant/Kash_3/ \
- http://nivi.interfree.it/distfiles/${PORTNAME}/
-DISTFILES= ${PORTNAME:tu}-${ELFTYPE}-i686-${PORTVERSION:S|.|-|g}.tar.bz2
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Computer algebra system for computing in algebraic number fields
-
-RUN_DEPENDS= curl:${PORTSDIR}/ftp/curl
-
-NO_CDROM= Not for commercial distribution or use
-NO_BUILD= yes
-
-OPTIONS_DEFINE= OPTLIB DOCS
-OPTIONS_DEFAULT= OPTLIB
-OPTLIB_DESC= Install optional functions library
-
-PLIST_SUB= OPTLIB=${OPTLIB}
-
-USES= tar:bzip2
-USE_LINUX= yes
-
-SUB_FILES= ${PORTNAME}
-WRKSRC= ${WRKDIR}/${PORTNAME:tu}-${ELFTYPE}-i686-${PORTVERSION:S|.|-|g}
-
-
-FIND_DATA= -type f -mindepth 1 -exec ${INSTALL_DATA} {} ${DATADIR}/{} \;
-FIND_DIRS= -type d -exec ${MKDIR} ${DATADIR}/{} \;
-FIND_HERE= data gap lib
-
-NO_STAGE= yes
-.include <bsd.port.options.mk>
-
-.if ${PORT_OPTIONS:MDOCS}
-FIND_HERE+= html pdf
-.endif
-
-LN_OPTS= -sf
-ELFTYPE= Linux
-
-.if ${PORT_OPTIONS:MOPTLIB}
-DISTFILES+= ${PORTNAME:tu}-lib-archindep-${PORTVERSION:S|.|-|g}.tar.bz2
-OPTLIB=
-.else
-OPTLIB= "@comment "
-.endif
-
-do-install:
- ${MKDIR} ${DATADIR};
-.if ${PORT_OPTIONS:MOPTLIB}
- cd ${WRKDIR}/${PORTNAME:tu}-lib-archindep-${PORTVERSION:S|.|-|g}; \
- ${COPYTREE_SHARE} . ${DATADIR}
-.endif
- cd ${WRKSRC}; \
- ${FIND} ${FIND_HERE} ${FIND_DIRS}; \
- ${FIND} ${FIND_HERE} ${FIND_DATA}; \
- ${BRANDELF} -t ${ELFTYPE} ${PORTNAME}; \
- ${INSTALL_PROGRAM} ${PORTNAME} ${DATADIR}/${PORTNAME};
- ${INSTALL_SCRIPT} ${WRKDIR}/${SUB_FILES} ${PREFIX}/bin/${PORTNAME}
-.if ${PORT_OPTIONS:MDOCS}
- ${MKDIR} ${DOCSDIR}; \
- ${MV} ${DATADIR}/html ${DATADIR}/pdf ${DOCSDIR}
-.endif
-
-.include <bsd.port.mk>
diff --git a/math/kash3/distinfo b/math/kash3/distinfo
deleted file mode 100644
index dc79961d3383..000000000000
--- a/math/kash3/distinfo
+++ /dev/null
@@ -1,4 +0,0 @@
-SHA256 (KASH3-Linux-i686-2008-07-31.tar.bz2) = c88a28b21d8b75dc5a66f54cbb5078c4f32ef1aace28fecbe664803a0f34a360
-SIZE (KASH3-Linux-i686-2008-07-31.tar.bz2) = 17334852
-SHA256 (KASH3-lib-archindep-2008-07-31.tar.bz2) = eaaf650c20b1c5d27445380dd23f0bfedeb057b8c7c9561cce0c369081104af9
-SIZE (KASH3-lib-archindep-2008-07-31.tar.bz2) = 3367591
diff --git a/math/kash3/files/kash3.in b/math/kash3/files/kash3.in
deleted file mode 100644
index 52f30ba87cee..000000000000
--- a/math/kash3/files/kash3.in
+++ /dev/null
@@ -1,4 +0,0 @@
-#!/bin/sh
-# $FreeBSD$
-cd %%DATADIR%%
-./kash3
diff --git a/math/kash3/pkg-descr b/math/kash3/pkg-descr
deleted file mode 100644
index 361e9a9a9987..000000000000
--- a/math/kash3/pkg-descr
+++ /dev/null
@@ -1,17 +0,0 @@
-KANT is a software package for mathematicians interested in algebraic number
-theory. For those KANT is a tool for sophisticated computations in number
-fields, in global function fields, and in local fields.
-
-The main new features of KASH3 (the KAnt SHell) are
-
- * modular type system
- * integrated help system with inline help and a reference manual
- in html format
- * overloading of functions
- * local fields (unramified extensions, ramified extensions polynomial
- factorization)
- * access to the QaoS databases of numberfields and transitive groups
- * new generic function names
-
-Author: The KANT Group <kant@math.tu-berlin.de>
-WWW: http://www.math.tu-berlin.de/~kant/kash.html
diff --git a/math/kash3/pkg-plist b/math/kash3/pkg-plist
deleted file mode 100644
index 50c67447263d..000000000000
--- a/math/kash3/pkg-plist
+++ /dev/null
@@ -1,5097 +0,0 @@
-bin/kash3
-%%PORTDOCS%%%%DOCSDIR%%/html/.001535.html
-%%PORTDOCS%%%%DOCSDIR%%/html/.004a5f.html
-%%PORTDOCS%%%%DOCSDIR%%/html/.0061b4.html
-%%PORTDOCS%%%%DOCSDIR%%/html/.006396.html
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-%%PORTDOCS%%%%DOCSDIR%%/html/.00c64d.html
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-%%PORTDOCS%%%%DOCSDIR%%/html/.01a221.html
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-%%PORTDOCS%%%%DOCSDIR%%/html/.01e12e.html
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-%%DATADIR%%/gap/tbl/ctbunit1.tbl
-%%DATADIR%%/gap/tbl/ctbunit2.tbl
-%%DATADIR%%/gap/tbl/ctbunit3.tbl
-%%DATADIR%%/gap/tbl/ctbunit4.tbl
-%%DATADIR%%/gap/tbl/ctgeneri.tbl
-%%DATADIR%%/gap/tbl/ctoalter.tbl
-%%DATADIR%%/gap/tbl/ctoatres.tbl
-%%DATADIR%%/gap/tbl/ctocliff.tbl
-%%DATADIR%%/gap/tbl/ctoconja.tbl
-%%DATADIR%%/gap/tbl/ctofisc1.tbl
-%%DATADIR%%/gap/tbl/ctofisc2.tbl
-%%DATADIR%%/gap/tbl/ctoholpl.tbl
-%%DATADIR%%/gap/tbl/ctoinert.tbl
-%%DATADIR%%/gap/tbl/ctoline1.tbl
-%%DATADIR%%/gap/tbl/ctoline2.tbl
-%%DATADIR%%/gap/tbl/ctoline3.tbl
-%%DATADIR%%/gap/tbl/ctoline4.tbl
-%%DATADIR%%/gap/tbl/ctoline5.tbl
-%%DATADIR%%/gap/tbl/ctoline6.tbl
-%%DATADIR%%/gap/tbl/ctomathi.tbl
-%%DATADIR%%/gap/tbl/ctomaxi1.tbl
-%%DATADIR%%/gap/tbl/ctomaxi2.tbl
-%%DATADIR%%/gap/tbl/ctomaxi3.tbl
-%%DATADIR%%/gap/tbl/ctomaxi4.tbl
-%%DATADIR%%/gap/tbl/ctomaxi5.tbl
-%%DATADIR%%/gap/tbl/ctomaxi6.tbl
-%%DATADIR%%/gap/tbl/ctomisc1.tbl
-%%DATADIR%%/gap/tbl/ctomisc2.tbl
-%%DATADIR%%/gap/tbl/ctomisc3.tbl
-%%DATADIR%%/gap/tbl/ctomisc4.tbl
-%%DATADIR%%/gap/tbl/ctomisc5.tbl
-%%DATADIR%%/gap/tbl/ctomisc6.tbl
-%%DATADIR%%/gap/tbl/ctomonst.tbl
-%%DATADIR%%/gap/tbl/ctonews.tbl
-%%DATADIR%%/gap/tbl/ctoorth1.tbl
-%%DATADIR%%/gap/tbl/ctoorth2.tbl
-%%DATADIR%%/gap/tbl/ctoorth3.tbl
-%%DATADIR%%/gap/tbl/ctoorth4.tbl
-%%DATADIR%%/gap/tbl/ctoorth5.tbl
-%%DATADIR%%/gap/tbl/ctospora.tbl
-%%DATADIR%%/gap/tbl/ctosylno.tbl
-%%DATADIR%%/gap/tbl/ctosympl.tbl
-%%DATADIR%%/gap/tbl/ctotwis1.tbl
-%%DATADIR%%/gap/tbl/ctotwis2.tbl
-%%DATADIR%%/gap/tbl/ctounit1.tbl
-%%DATADIR%%/gap/tbl/ctounit2.tbl
-%%DATADIR%%/gap/tbl/ctounit3.tbl
-%%DATADIR%%/gap/tbl/ctounit4.tbl
-%%DATADIR%%/gap/tbl/ctprimar.tbl
-%%DATADIR%%/gap/thr/thrgp.grp
-%%DATADIR%%/gap/thr/thrgp243.grp
-%%DATADIR%%/gap/thr/thrgp27.grp
-%%DATADIR%%/gap/thr/thrgp3.grp
-%%DATADIR%%/gap/thr/thrgp729.grp
-%%DATADIR%%/gap/thr/thrgp81.grp
-%%DATADIR%%/gap/thr/thrgp9.grp
-%%DATADIR%%/gap/tom/tmaltern.tom
-%%DATADIR%%/gap/tom/tmlinear.tom
-%%DATADIR%%/gap/tom/tmmath24.tom
-%%DATADIR%%/gap/tom/tmmisc.tom
-%%DATADIR%%/gap/tom/tmprimar.tom
-%%DATADIR%%/gap/tom/tmsporad.tom
-%%DATADIR%%/gap/tom/tmsuzuki.tom
-%%DATADIR%%/gap/tom/tmsymple.tom
-%%DATADIR%%/gap/tom/tmunitar.tom
-%%DATADIR%%/gap/two/twogp.grp
-%%DATADIR%%/gap/two/twogp128.grp
-%%DATADIR%%/gap/two/twogp16.grp
-%%DATADIR%%/gap/two/twogp2.grp
-%%DATADIR%%/gap/two/twogp32.grp
-%%DATADIR%%/gap/two/twogp4.grp
-%%DATADIR%%/gap/two/twogp64.grp
-%%DATADIR%%/gap/two/twogp8.grp
-%%DATADIR%%/gap/two/twogpd1.grp
-%%DATADIR%%/gap/two/twogpd2.grp
-%%DATADIR%%/gap/two/twogpd3a.grp
-%%DATADIR%%/gap/two/twogpd3b.grp
-%%DATADIR%%/gap/two/twogpd3c.grp
-%%DATADIR%%/gap/two/twogpd3d.grp
-%%DATADIR%%/gap/two/twogpd3e.grp
-%%DATADIR%%/gap/two/twogpd4a.grp
-%%DATADIR%%/gap/two/twogpd4b.grp
-%%DATADIR%%/gap/two/twogpd4c.grp
-%%DATADIR%%/gap/two/twogpd4d.grp
-%%DATADIR%%/gap/two/twogpd4e.grp
-%%DATADIR%%/gap/two/twogpd5a.grp
-%%DATADIR%%/gap/two/twogpd5b.grp
-%%DATADIR%%/gap/two/twogpd5c.grp
-%%DATADIR%%/gap/two/twogpd5d.grp
-%%DATADIR%%/gap/two/twogpd5e.grp
-%%DATADIR%%/gap/two/twogpd6.grp
-%%DATADIR%%/gap/two/twogpd7.grp
-%%DATADIR%%/gap/two/twogpd8.grp
-%%DATADIR%%/kash3
-%%OPTLIB%%%%DATADIR%%/lib/ModPoly.k
-%%OPTLIB%%%%DATADIR%%/lib/MultPol.k
-%%DATADIR%%/lib/XML.g
-%%DATADIR%%/lib/__DOC.g
-%%DATADIR%%/lib/alff.g
-%%DATADIR%%/lib/alist.g
-%%DATADIR%%/lib/constants.g
-%%DATADIR%%/lib/doc.g
-%%DATADIR%%/lib/docui.g
-%%DATADIR%%/lib/elldoc.g
-%%DATADIR%%/lib/elliptic.g
-%%OPTLIB%%%%DATADIR%%/lib/ideals.k
-%%DATADIR%%/lib/init-methods.g
-%%DATADIR%%/lib/init.g
-%%OPTLIB%%%%DATADIR%%/lib/iso.k
-%%OPTLIB%%%%DATADIR%%/lib/isoinit.k
-%%DATADIR%%/lib/kash.g
-%%DATADIR%%/lib/list.g
-%%DATADIR%%/lib/locFact.g
-%%DATADIR%%/lib/makedoc.gi
-%%DATADIR%%/lib/map.g
-%%DATADIR%%/lib/matrix.g
-%%DATADIR%%/lib/method.g
-%%DATADIR%%/lib/qaos.k
-%%DATADIR%%/lib/term.g
-%%OPTLIB%%%%DATADIR%%/lib/unit_group_res.g
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/pdf
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/html/kantlogo/diamond
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/html/kantlogo/Zcrown
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/html/kantlogo/CeBIT/2004
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/html/kantlogo/CeBIT
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/html/kantlogo
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/html/cgi-bin
-%%PORTDOCS%%@dirrm %%DOCSDIR%%/html
-%%PORTDOCS%%@dirrm %%DOCSDIR%%
-@dirrm %%DATADIR%%/lib
-@dirrm %%DATADIR%%/gap/two
-@dirrm %%DATADIR%%/gap/tom
-@dirrm %%DATADIR%%/gap/thr
-@dirrm %%DATADIR%%/gap/tbl
-@dirrm %%DATADIR%%/gap/sml/idlib
-@dirrm %%DATADIR%%/gap/sml
-@dirrm %%DATADIR%%/gap/lib
-@dirrm %%DATADIR%%/gap/grp
-@dirrm %%DATADIR%%/gap
-@dirrm %%DATADIR%%/data/ecpp/Data/Weber
-@dirrm %%DATADIR%%/data/ecpp/Data
-@dirrm %%DATADIR%%/data/ecpp
-@dirrm %%DATADIR%%/data/TrnGps
-@dirrm %%DATADIR%%/data/Galois
-@dirrm %%DATADIR%%/data
-@dirrm %%DATADIR%%
diff --git a/math/matrix/Makefile b/math/matrix/Makefile
deleted file mode 100644
index fc4d49e2f873..000000000000
--- a/math/matrix/Makefile
+++ /dev/null
@@ -1,26 +0,0 @@
-# Created by: Anton Voronin <anton@urc.ac.ru>
-# $FreeBSD$
-
-PORTNAME= matrix
-PORTVERSION= 1.0
-CATEGORIES= math devel
-MASTER_SITES= http://www.chelcom.ru/~anton/projects/files/
-DISTNAME= matrix-${PORTVERSION}
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= C++ library to manipulate matrices and vectors
-
-WRKSRC= ${WRKDIR}/matrix
-
-USES= zip
-USE_LDCONFIG= yes
-PLIST_SUB= LIBVERSION=1
-
-NO_STAGE= yes
-.include <bsd.port.pre.mk>
-
-.if ${ARCH} == "amd64"
-BROKEN= Does not build on amd64 (shared libraries must be compiled with -fPIC)
-.endif
-
-.include <bsd.port.post.mk>
diff --git a/math/matrix/distinfo b/math/matrix/distinfo
deleted file mode 100644
index ef9740a44b57..000000000000
--- a/math/matrix/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (matrix-1.0.zip) = 525dc8e7546fb2b401980d1b6fc2bd3a0a5163c1845cbe68bbcaf79b11133741
-SIZE (matrix-1.0.zip) = 7025
diff --git a/math/matrix/pkg-descr b/math/matrix/pkg-descr
deleted file mode 100644
index 22bf648c89b5..000000000000
--- a/math/matrix/pkg-descr
+++ /dev/null
@@ -1,4 +0,0 @@
-C++ library that lets to manipulate matrices and vectors using the base
-class MATRIX and derived class VECTOR.
-
-WWW: http://rnoc.urc.ac.ru/~anton/projects/matrix/Matrix.html
diff --git a/math/matrix/pkg-plist b/math/matrix/pkg-plist
deleted file mode 100644
index 07ddf49d27b9..000000000000
--- a/math/matrix/pkg-plist
+++ /dev/null
@@ -1,6 +0,0 @@
-include/matrix.h
-lib/libmatrix.a
-lib/libmatrix.so
-lib/libmatrix.so.%%LIBVERSION%%
-share/doc/matrix/Matrix.html
-@dirrm share/doc/matrix
diff --git a/math/mprime/Makefile b/math/mprime/Makefile
deleted file mode 100644
index 3b9fabebb614..000000000000
--- a/math/mprime/Makefile
+++ /dev/null
@@ -1,36 +0,0 @@
-# Created by: Mario Sergio Fujikawa Ferreira <lioux@FreeBSD.org>
-# $FreeBSD$
-
-PORTNAME= mprime
-PORTVERSION= 0.0.${SOURCE_VERSION}
-CATEGORIES= math benchmarks net
-MASTER_SITES= ftp://mersenne.org/gimps/
-DISTNAME= sprime${PORTVERSION:S/^0.0.//:S/.//}-freebsd
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= mersenne.org distributed Great Internet Mersenne Prime Search
-
-ONLY_FOR_ARCHS= i386
-NO_BUILD= yes
-NO_WRKSUBDIR= yes
-
-SUB_FILES= pkg-message wrapper.sh
-
-# source code version
-SOURCE_VERSION= 24.14
-
-NO_STAGE= yes
-do-install:
- @${INSTALL_PROGRAM} ${WRKSRC}/mprime ${PREFIX}/bin/mprime-real
- @${INSTALL_SCRIPT} ${WRKDIR}/wrapper.sh ${PREFIX}/bin/mprime
-.ifndef(NOPORTDOCS)
- @${MKDIR} ${DOCSDIR}${PKGNAMESUFFIX}
- @${INSTALL_DATA} ${WRKDIR}/*.txt ${DOCSDIR}${PKGNAMESUFFIX}
-.endif
-
-post-install:
-.if !defined(NOPORTDOCS)
- @${CAT} ${PKGMESSAGE}
-.endif
-
-.include <bsd.port.mk>
diff --git a/math/mprime/distinfo b/math/mprime/distinfo
deleted file mode 100644
index cced7b2530f4..000000000000
--- a/math/mprime/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (sprime2414-freebsd.tar.gz) = 6589a24133eec65fd574ac3bfdc1b6f89aff337a64464240a7e561e4f8570aaa
-SIZE (sprime2414-freebsd.tar.gz) = 873438
diff --git a/math/mprime/files/pkg-message.in b/math/mprime/files/pkg-message.in
deleted file mode 100644
index 46a39c0949cd..000000000000
--- a/math/mprime/files/pkg-message.in
+++ /dev/null
@@ -1,10 +0,0 @@
- ATTENTIONATTENTION:
-
-Please, make sure that you read
-%%DOCSDIR%%/license.txt
-and agree to the licensing terms before running this application.
-
-Furthermore, read
-%%DOCSDIR%%/readme.txt
-It contains important information about both configuring and running
-mprime. You will have problems running it if you do not read it.
diff --git a/math/mprime/files/wrapper.sh.in b/math/mprime/files/wrapper.sh.in
deleted file mode 100644
index 3276091dc060..000000000000
--- a/math/mprime/files/wrapper.sh.in
+++ /dev/null
@@ -1,23 +0,0 @@
-#!/bin/sh
-
-PREFIX="%%PREFIX%%"
-PROGRAM="${0}"
-DIRNAME=${HOME}/.mprime
-
-if [ ! -d ${DIRNAME} ]
-then
- mkdir -p ${DIRNAME}
-fi
-
-if [ ! -h ${DIRNAME}/${PROGRAM##*/} ]
-then
- ln -sf ${PREFIX}/bin/${PROGRAM##*/}-real ${DIRNAME}/${PROGRAM##*/}
-fi
-
-echo " ${*} " | grep " \-createdironly " ||
-{
- cd ${DIRNAME} &&
- echo Running under ${DIRNAME} &&
- exec ./${PROGRAM##*/} "${@}" ||
- echo PROBLEM. Cannot create directory ${DIRNAME}, make sure you have the proper permissions to create it and try again
-}
diff --git a/math/mprime/pkg-descr b/math/mprime/pkg-descr
deleted file mode 100644
index d26307ea6217..000000000000
--- a/math/mprime/pkg-descr
+++ /dev/null
@@ -1,15 +0,0 @@
-[ excerpt from developer's www site ]
-
-This is the mersenne.org's client.
-
-Welcome to the Great Internet Mersenne Prime Search!
-
-To use this program you must agree to the prize rules at
-http://www.mersenne.org/prize.htm
-
-In case you ever forget, the URL is http://www.mersenne.org/prime.htm.
-The author's email address is woltman@alum.mit.edu. For networking
-questions, contact Scott Kurowski's technical support team at
-primenet@entropia.com.
-
-WWW: http://www.mersenne.org/
diff --git a/math/mprime/pkg-plist b/math/mprime/pkg-plist
deleted file mode 100644
index 74d640e2b1ad..000000000000
--- a/math/mprime/pkg-plist
+++ /dev/null
@@ -1,8 +0,0 @@
-bin/mprime
-bin/mprime-real
-%%PORTDOCS%%%%DOCSDIR%%/license.txt
-%%PORTDOCS%%%%DOCSDIR%%/readme.txt
-%%PORTDOCS%%%%DOCSDIR%%/stress.txt
-%%PORTDOCS%%%%DOCSDIR%%/undoc.txt
-%%PORTDOCS%%%%DOCSDIR%%/whatsnew.txt
-%%PORTDOCS%%@dirrm %%DOCSDIR%%
diff --git a/math/petsc/Makefile b/math/petsc/Makefile
deleted file mode 100644
index 12aeede0a036..000000000000
--- a/math/petsc/Makefile
+++ /dev/null
@@ -1,303 +0,0 @@
-# Created by: Thierry Thomas <thierry@pompo.net>
-# $FreeBSD$
-
-PORTNAME= petsc
-DISTVERSION= 2.3.3-p0
-PORTREVISION= 12
-PORTEPOCH= 1
-CATEGORIES= math parallel
-MASTER_SITES= ftp://ftp.mcs.anl.gov/pub/petsc/release-snapshots/
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Portable, Extensible Toolkit for Scientific computation
-
-BUILD_DEPENDS= python:${PORTSDIR}/lang/python
-RUN_DEPENDS= python:${PORTSDIR}/lang/python \
- ksh:${PORTSDIR}/shells/pdksh \
- qsub:${PORTSDIR}/sysutils/torque
-
-HAS_CONFIGURE= yes
-USE_PYTHON= yes
-CONFIGURE_SCRIPT= config/configure.py
-CONFIGURE_LOG= configure.log
-CONFIGURE_ENV= PETSC_ARCH=${TARGET} \
- PETSC_DIR=${WRKSRC}
-CONFIGURE_ARGS= --prefix=${PREFIX}/${PFX} --COPTFLAGS="${CFLAGS}" \
- --CXXOPTFLAGS="${CXXFLAGS}" --FOPTFLAGS="${FFLAGS}" \
- --with-shared=1 --with-cc=${CC} --with-fc=${FC} \
- --CPPFLAGS="-I${LOCALBASE}/include" \
- --LDFLAGS="${PTHREAD_LIBS} ${LDFLAGS}"
-ALL_TARGET= all
-MAKEFILE= makefile
-MAKE_ENV= PETSC_DIR=${WRKSRC}
-
-SUB_FILES= pkg-message
-SUB_LIST= PETSC_ARCH=${TARGET} PETSC_DIR=${PREFIX}/${PFX}
-PKGMESSAGE= ${WRKDIR}/pkg-message
-
-.if !defined(WITHOUT_X11)
-USE_XORG= x11
-CONFIGURE_ARGS+= --with-x-include=${LOCALBASE}/include \
- --with-x-lib=${LOCALBASE}/lib/libX11.so
-.endif
-
-USES= fortran
-FFLAGS+= -O2
-PFX= ${PORTNAME}
-TARGET= ${OPSYS:tl}
-PLIST_SUB= PFX=${PFX} TARGET=${TARGET}
-
-.if !defined(WITHOUT_UMFPACK)
-UMFPACK_LIBS= umfpack.so,cholmod.so,colamd.so,amd.so,suitesparseconfig.so
-L=${LOCALBASE}/lib/lib
-LIB_DEPENDS+= libumfpack.so:${PORTSDIR}/math/suitesparse
-CONFIGURE_ARGS+= --with-umfpack-include="${LOCALBASE}/include/suitesparse" \
- --with-umfpack-lib="[${UMFPACK_LIBS:C/^/${L}/:C/,/, ${L}/g}]"
-.endif
-
-NO_STAGE= yes
-
-OPTIONS_DEFINE= DOCS
-
-.include <bsd.port.options.mk>
-
-.if ${PORT_OPTIONS:MDOCS}
-PORTDOCS= *
-#USE_TEX= latex:build
-#BUILD_DEPENDS+= c2html:${PORTSDIR}/textproc/c2html \
-# doc2lt:${PORTSDIR}/textproc/sowing
-.endif
-
-LIBSCALAPACK= ${LOCALBASE}/lib/libscalapack.a
-LIBBLACS= ${LOCALBASE}/lib/libblacs.a
-MPIDIR= ${LOCALBASE}
-
-.if exists(${LOCALBASE}/mpi/openmpi/bin/mpirun)
-WITH_OPENMPI= yes
-MPIDIR= ${LOCALBASE}/mpi/openmpi
-.endif
-
-.if ${ARCH} == "amd64"
-WITHOUT_SUPERLU= yes
-.endif
-
-.if exists(${MPIDIR}/bin/mpicc) && !defined(WITHOUT_MPI)
-WITH_MPI= yes
-.endif
-.if defined(WITH_MPI)
-. if exists(${LOCALBASE}/bin/lamboot)
-BROKEN= Cannot build with MPI when lam-7 is installed - set WITHOUT_MPI or deinstall net/lam
-. endif
-.if defined(WITH_OPENMPI)
-MPIDIR= ${LOCALBASE}/mpi/openmpi
-BUILD_DEPENDS+= ${MPIDIR}/lib/libmpi.so:${PORTSDIR}/net/openmpi
-RUN_DEPENDS+= ${MPIDIR}/lib/libmpi.so:${PORTSDIR}/net/openmpi
-PKGNAMESUFFIX+= -openmpi
-MAKE_ENV+= PATH=${MPIDIR}/bin:${PATH}
-# math/blocksolve95 does not pass regression test when compiled with OpenMPI.
-WITHOUT_BS95= yes
-WITHOUT_SPOOLES= yes
-WITHOUT_PARMETIS= yes
-CONFIGURE_ARGS+= --with-cc=${MPIDIR}/bin/mpicc --with-fc=${MPIDIR}/bin/mpif77
-.else
-BUILD_DEPENDS+= ${LOCALBASE}/bin/mpicc:${PORTSDIR}/net/mpich2
-RUN_DEPENDS+= ${LOCALBASE}/bin/mpirun:${PORTSDIR}/net/mpich2
-PKGNAMESUFFIX+= -mpich
-WITHOUT_SPOOLES= yes
-.endif
-
-CONFIGURE_ARGS+= --with-mpi-dir=${MPIDIR}
-CONFLICTS= petsc-2*
-PLIST_SUB+= MPIUNI="@comment "
-.else
-CONFIGURE_ARGS+= --with-mpi=0
-CONFLICTS= petsc-mpich-2*
-WITHOUT_BS95= yes
-WITHOUT_PARMETIS= yes
-WITHOUT_SPOOLES= yes
-WITHOUT_SUPERLU= yes
-PLIST_SUB+= MPIUNI=""
-.endif
-
-.if exists(${LOCALBASE}/lib/libatlas.so) && !defined(WITH_BLAS)
-WITH_ATLAS= yes
-.endif
-.if defined(WITH_ATLAS)
-LIB_DEPENDS+= libatlas.so:${PORTSDIR}/math/atlas
-LIBBLASLAPACK= -L${LOCALBASE}/lib -lalapack -lcblas -lf77blas
-CONFIGURE_ARGS+= --with-blas-lapack-lib="${LIBBLASLAPACK}"
-.else
-LIB_DEPENDS+= liblapack.so:${PORTSDIR}/math/lapack
-LIBBLASLAPACK= -L${LOCALBASE}/lib -llapack -lblas
-CONFIGURE_ARGS+= --with-blas-lapack-lib="${LIBBLASLAPACK}"
-.endif
-
-.if !defined(WITHOUT_SUPERLU) && !defined(WITHOUT_BLASLAPACK)
-BUILD_DEPENDS+= ${LOCALBASE}/lib/libsuperlu.a:${PORTSDIR}/math/superlu
-CONFIGURE_ARGS+= --with-superlu-include=${LOCALBASE}/include/superlu \
- --with-superlu-lib=${LOCALBASE}/lib/libsuperlu.a
-.endif
-
-.if defined(WITHOUT_BS95)
-CONFIGURE_ARGS+= --with-blocksolve95=0
-.else
-BUILD_DEPENDS+= ${LOCALBASE}/lib/libBS95.a:${PORTSDIR}/math/blocksolve95
-CONFIGURE_ARGS+= --with-blocksolve95-include=${LOCALBASE}/include \
- --with-blocksolve95-lib=${LOCALBASE}/lib/libBS95.a
-.endif
-
-.if defined(WITHOUT_PARMETIS) || exists(${LOCALBASE}/lib/libmetis.so)
-# parmetis cannot be built with suitesparse
-CONFIGURE_ARGS+= --with-parmetis=0
-.else
-BUILD_DEPENDS+= ${LOCALBASE}/lib/parmetis/libparmetis.a:${PORTSDIR}/math/parmetis
-CONFIGURE_ARGS+= --with-parmetis=1 \
- --with-parmetis-include=${LOCALBASE}/include/parmetis \
- --with-parmetis-lib=[${LOCALBASE}/lib/parmetis/libparmetis.a,${LOCALBASE}/lib/parmetis/libmetis.a]
-CONFLICTS+= metis-4*
-.endif
-
-.if exists(${LIBBLACS})
-WITH_BLACS= yes
-.endif
-.if defined(WITH_BLACS) && defined(WITH_MPI)
-LIB_DEPENDS+= libblacs.so:${PORTSDIR}/math/blacs
-CONFIGURE_ARGS+= --with_blacs=1 \
- --with-blacs-include=${LOCALBASE}/include \
- --with-blacs-lib=[${LOCALBASE}/lib/libblacsc.a,${LOCALBASE}/lib/libblacsf77.a,${LOCALBASE}/lib/libblacs.a]
-. if exists(${LIBSCALAPACK}) && defined(WITH_MPI)
-WITH_SCALAPACK= yes
-. endif
-. if defined(WITH_SCALAPACK)
-LIB_DEPENDS+= libscalapack.so:${PORTSDIR}/math/scalapack
-CONFIGURE_ARGS+= --with-scalapack=1 \
- --with-scalapack-dir=${LOCALBASE}
-. endif
-.endif
-
-#.if exists(${LOCALBASE}/bin/lgrind)
-#WITH_LGRIND= yes
-#.endif
-#.if defined(WITH_LGRIND)
-#BUILD_DEPENDS+= lgrind:${PORTSDIR}/print/lgrind
-#RUN_DEPENDS+= lgrind:${PORTSDIR}/print/lgrind
-#.endif
-
-.if exists(${LOCALBASE}/lib/libnetcdf.so)
-WITH_NETCDF= yes
-.endif
-.if defined(WITH_NETCDF)
-LIB_DEPENDS+= libnetcdf.so:${PORTSDIR}/science/netcdf
-CONFIGURE_ENV+= PNETCDF_INCLUDE=${LOCALBASE}/include \
- PNETCDF_LIB=${LOCALBASE}/lib
-.endif
-
-.if exists(${LOCALBASE}/bin/svn)
-WITH_SVN= yes
-.endif
-.if defined(WITH_SVN)
-BUILD_DEPENDS+= svn:${PORTSDIR}/devel/subversion
-RUN_DEPENDS+= svn:${PORTSDIR}/devel/subversion
-.endif
-
-#.if exists(${LOCALBASE}/bin/valgrind)
-#WITH_VALGRIND= yes
-#.endif
-#.if defined(WITH_VALGRIND)
-#BUILD_DEPENDS+= valgrind:${PORTSDIR}/devel/valgrind
-#RUN_DEPENDS+= valgrind:${PORTSDIR}/devel/valgrind
-#.endif
-
-.if !defined(WITHOUT_SPOOLES)
-. if exists(${LOCALBASE}/lib/libspooles.a) \
- && !exists(${LOCALBASE}/include/spooles/MPI/spoolesMPI.h)
-BROKEN= Please deinstall spooles and reinstall spooles-mpich
-. else
-BUILD_DEPENDS+= ${LOCALBASE}/lib/libspooles.a:${PORTSDIR}/math/spooles-mpich
-. endif
-CONFIGURE_ARGS+= --with-spooles-include=${LOCALBASE}/include/spooles \
- --with-spooles-lib=[${LOCALBASE}/lib/libspooles.a,${LIBDIR}/libm.a]
-.endif
-
-pre-everything::
- @${ECHO_MSG}
-.if !defined (WITH_MPI)
- @${ECHO_MSG} "Define WITH_MPI to use MPI."
- @${ECHO_MSG} "Note: this is not compatible with Python bindings!"
-.elif !defined (WITHOUT_MPI)
- @${ECHO_MSG} "Define WITHOUT_MPI to not use MPI."
-.endif
-.if !defined (WITH_SVN)
- @${ECHO_MSG} "Define WITH_SVN to use subversion."
-.endif
-.if !defined (WITHOUT_X11)
- @${ECHO_MSG} "Define WITHOUT_X11 to remove X11 support."
-.endif
-.if !defined (WITH_ATLAS)
- @${ECHO_MSG} "Define WITH_ATLAS to replace Blas / Lapack support by Atlas."
-.endif
-.if !defined (WITHOUT_BS95)
- @${ECHO_MSG} "Define WITHOUT_BS95 to remove BlockSolve95 support."
-.endif
-.if !defined (WITHOUT_PARMETIS)
- @${ECHO_MSG} "Define WITHOUT_PARMETIS to remove ParMETIS support."
-.endif
-.if !defined (WITHOUT_SPOOLES)
- @${ECHO_MSG} "Define WITHOUT_SPOOLES to remove SPOOLES support."
-.endif
-#.if !defined (WITHOUT_SUPERLU)
-# @${ECHO_MSG} "Define WITHOUT_SUPERLU to remove SuperLU support."
-#.endif
-.if !defined (WITHOUT_UMFPACK)
- @${ECHO_MSG} "Define WITHOUT_UMFPACK to remove UMFPACK support."
-.endif
- @${ECHO_MSG}
-
-pre-configure:
- @${RM} ${WRKSRC}/bmake/common/rules.shared.basic.orig
- ${REINPLACE_CMD} -e "s|AMD/Include|include/AMD|" \
- -e "s|AMD/Lib|${LOCALBASE}/lib|" \
- ${WRKSRC}/python/PETSc/packages/UMFPACK.py
- ${REINPLACE_CMD} -e "s|/bin/ksh|${LOCALBASE}/bin/ksh|" \
- ${WRKSRC}/bin/popup
- @${RM} ${WRKSRC}/bin/popup.bak
-.if defined (WITH_MPI)
-. for ps in ml.py MPE.py
- ${REINPLACE_CMD} -e "s|-lpmpich|-lmpl|" \
- ${WRKSRC}/python/PETSc/packages/${ps}
-. endfor
- ${REINPLACE_CMD} -e "s|libpmpich|libmpl|" \
- ${WRKSRC}/python/BuildSystem/config/packages/MPI.py
-.endif
-
-post-install:
- ${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/${PFX}/bin
- ${PYTHON_CMD} -O ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/${PFX}/bin
- ${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/${PFX}/bmake
- ${PYTHON_CMD} -O ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/${PFX}/bmake
-.if ${PORT_OPTIONS:MDOCS}
- (cd ${BUILD_WRKSRC}; ${SETENV} ${MAKE_ENV} ${MAKE} ${MAKE_FLAGS} \
- ${MAKEFILE} ${MAKE_ARGS} install_docs)
-.endif
- @${ECHO_MSG}
- @${CAT} ${PKGMESSAGE}
- @${ECHO_MSG}
-
-.if defined(MAINTAINER_MODE)
-regression-test:
-. if defined (WITH_MPI) && !defined(WITH_OPENMPI)
-. if !exists(${HOME}/.mpd.conf)
- @${ECHO_CMD} "MPD_SECRETWORD=change_on_install" > ${HOME}/.mpd.conf
- ${CHMOD} go-r ${HOME}/.mpd.conf
- @${ECHO_MSG} "${HOME}/.mpd.conf has been generated - please change the secret word!"
-. endif
- ${LOCALBASE}/bin/mpd &
-. endif
- (cd ${BUILD_WRKSRC}; \
- ${SETENV} ${MAKE_ENV} ${MAKE} ${MAKE_FLAGS} ${MAKEFILE} ${MAKE_ARGS} test)
-. if defined (WITH_MPI) && !defined(WITH_OPENMPI)
- ${LOCALBASE}/bin/mpdallexit
-. endif
-.endif
-
-.include <bsd.port.mk>
diff --git a/math/petsc/distinfo b/math/petsc/distinfo
deleted file mode 100644
index f0222a42bfc1..000000000000
--- a/math/petsc/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (petsc-2.3.3-p0.tar.gz) = a08d0f2022349321a26ae6c63f0ad5b069d37f48028377c549b81cc3e7b97ddf
-SIZE (petsc-2.3.3-p0.tar.gz) = 10966078
diff --git a/math/petsc/files/patch-bmake__common__rules.shared.basic b/math/petsc/files/patch-bmake__common__rules.shared.basic
deleted file mode 100644
index f64f611487b7..000000000000
--- a/math/petsc/files/patch-bmake__common__rules.shared.basic
+++ /dev/null
@@ -1,13 +0,0 @@
---- bmake/common/rules.shared.basic.orig 2007-05-23 19:30:02.000000000 -0400
-+++ bmake/common/rules.shared.basic 2012-06-15 00:43:31.000000000 -0400
-@@ -10,6 +10,10 @@
- shared_solaris2: shared_solaris
- shared_solaris2_gnu: shared_solaris_gnu
-
-+shared_freebsd10: shared_freebsd
-+shared_freebsd9: shared_freebsd
-+shared_freebsd8: shared_freebsd
-+shared_freebsd7: shared_freebsd
- shared_freebsd6: shared_freebsd
- shared_freebsd5: shared_freebsd
- shared_freebsd4: shared_freebsd
diff --git a/math/petsc/files/patch-config_configure.py b/math/petsc/files/patch-config_configure.py
deleted file mode 100644
index e5be99315905..000000000000
--- a/math/petsc/files/patch-config_configure.py
+++ /dev/null
@@ -1,11 +0,0 @@
---- ./config/configure.py.orig Sat Sep 2 02:24:13 2006
-+++ ./config/configure.py Sat Sep 2 23:23:33 2006
-@@ -97,7 +97,7 @@
- print ' *** Do not run configure as root, or using sudo. ***'
- print ' ***** That should be reserved for installation *****'
- print '================================================================================='
-- sys.exit(3)
-+ #sys.exit(3)
-
- # Check for broken cygwin
- if chkcygwin():
diff --git a/math/petsc/files/patch-makefile b/math/petsc/files/patch-makefile
deleted file mode 100644
index 22d6f88e3d34..000000000000
--- a/math/petsc/files/patch-makefile
+++ /dev/null
@@ -1,40 +0,0 @@
---- makefile.orig Sat Sep 2 03:57:37 2006
-+++ makefile Sat Sep 2 23:20:34 2006
-@@ -6,6 +6,7 @@
- ALL: all
- LOCDIR = ./
- DIRS = src include
-+DOCS_DIR = ${INSTALL_DIR}/../share/doc/petsc
- CFLAGS =
- FFLAGS =
-
-@@ -21,7 +22,7 @@
- echo " Do not run configure as root, or using sudo.";\
- echo " That should be reserved for installation";\
- echo "********************************************************************"; \
-- exit 1; fi
-+ fi
- @${OMAKE} PETSC_ARCH=${PETSC_ARCH} chkpetsc_dir
- -@${OMAKE} all_build 2>&1 | tee make_log_${PETSC_ARCH}
- -@egrep -i "( error | error:)" make_log_${PETSC_ARCH} > /dev/null; if [ "$$?" = "0" ]; then \
-@@ -261,14 +262,14 @@
- -@if [ "${INSTALL_DIR}" = "${PETSC_DIR}" ]; then \
- echo "You did not set a directory to install to";\
- else \
-- echo Installing PETSc documentation at ${INSTALL_DIR};\
-- if [ ! -d `dirname ${INSTALL_DIR}` ]; then \
-- ${MKDIR} `dirname ${INSTALL_DIR}` ; \
-+ echo Installing PETSc documentation at ${DOCS_DIR};\
-+ if [ ! -d `dirname ${DOCS_DIR}` ]; then \
-+ ${MKDIR} `dirname ${DOCS_DIR}` ; \
- fi;\
-- if [ ! -d ${INSTALL_DIR} ]; then \
-- ${MKDIR} ${INSTALL_DIR} ; \
-+ if [ ! -d ${DOCS_DIR} ]; then \
-+ ${MKDIR} ${DOCS_DIR} ; \
- fi;\
-- cp -fr docs ${INSTALL_DIR};\
-+ cp -fr docs/* ${DOCS_DIR};\
- ${RM} -fr docs/tex;\
- fi;
- # ------------------------------------------------------------------
diff --git a/math/petsc/files/patch-python_PETSc_packages_spooles.py b/math/petsc/files/patch-python_PETSc_packages_spooles.py
deleted file mode 100644
index 9184ce43136b..000000000000
--- a/math/petsc/files/patch-python_PETSc_packages_spooles.py
+++ /dev/null
@@ -1,12 +0,0 @@
---- ./python/PETSc/packages/spooles.py.orig Thu Aug 11 01:08:42 2005
-+++ ./python/PETSc/packages/spooles.py Sun Aug 21 23:04:09 2005
-@@ -11,7 +11,8 @@
- self.download = ['ftp://ftp.mcs.anl.gov/pub/petsc/externalpackages/spooles-2.2.tar.gz']
- self.functions = ['InpMtx_init']
- self.includes = ['MPI/spoolesMPI.h']
-- self.liblist = [[os.path.join('MPI','src','spoolesMPI.a'),'spooles.a']]
-+ # FreeBSD: MPI is included in our spooles.a
-+ # self.liblist = [[os.path.join('MPI','src','spoolesMPI.a'),'spooles.a']]
- self.libdir = ''
- self.includedir = ''
- return
diff --git a/math/petsc/files/patch-src__mat__impls__aij__seq__umfpack__umfpack.c b/math/petsc/files/patch-src__mat__impls__aij__seq__umfpack__umfpack.c
deleted file mode 100644
index 030e253cb259..000000000000
--- a/math/petsc/files/patch-src__mat__impls__aij__seq__umfpack__umfpack.c
+++ /dev/null
@@ -1,34 +0,0 @@
---- src/mat/impls/aij/seq/umfpack/umfpack.c.orig 2013-03-30 09:30:52.000000000 -0400
-+++ src/mat/impls/aij/seq/umfpack/umfpack.c 2013-03-30 09:32:20.000000000 -0400
-@@ -153,7 +153,7 @@
- PetscErrorCode ierr;
- int m=A->rmap.n,n=A->cmap.n,*ai=mat->i,*aj=mat->j,status,*ra,idx;
- PetscScalar *av=mat->a;
-- const char *strategy[]={"AUTO","UNSYMMETRIC","SYMMETRIC","2BY2"},
-+ const char *strategy[]={"AUTO","UNSYMMETRIC","SYMMETRIC"},
- *scale[]={"NONE","SUM","MAX"};
- PetscTruth flg;
-
-@@ -189,14 +189,12 @@
- case 0: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_AUTO; break;
- case 1: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_UNSYMMETRIC; break;
- case 2: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_SYMMETRIC; break;
-- case 3: lu->Control[UMFPACK_STRATEGY] = UMFPACK_STRATEGY_2BY2; break;
- }
- }
- ierr = PetscOptionsReal("-mat_umfpack_dense_col","Control[UMFPACK_DENSE_COL]","None",lu->Control[UMFPACK_DENSE_COL],&lu->Control[UMFPACK_DENSE_COL],PETSC_NULL);CHKERRQ(ierr);
- ierr = PetscOptionsReal("-mat_umfpack_dense_row","Control[UMFPACK_DENSE_ROW]","None",lu->Control[UMFPACK_DENSE_ROW],&lu->Control[UMFPACK_DENSE_ROW],PETSC_NULL);CHKERRQ(ierr);
- ierr = PetscOptionsReal("-mat_umfpack_amd_dense","Control[UMFPACK_AMD_DENSE]","None",lu->Control[UMFPACK_AMD_DENSE],&lu->Control[UMFPACK_AMD_DENSE],PETSC_NULL);CHKERRQ(ierr);
- ierr = PetscOptionsReal("-mat_umfpack_block_size","Control[UMFPACK_BLOCK_SIZE]","None",lu->Control[UMFPACK_BLOCK_SIZE],&lu->Control[UMFPACK_BLOCK_SIZE],PETSC_NULL);CHKERRQ(ierr);
-- ierr = PetscOptionsReal("-mat_umfpack_2by2_tolerance","Control[UMFPACK_2BY2_TOLERANCE]","None",lu->Control[UMFPACK_2BY2_TOLERANCE],&lu->Control[UMFPACK_2BY2_TOLERANCE],PETSC_NULL);CHKERRQ(ierr);
- ierr = PetscOptionsReal("-mat_umfpack_fixq","Control[UMFPACK_FIXQ]","None",lu->Control[UMFPACK_FIXQ],&lu->Control[UMFPACK_FIXQ],PETSC_NULL);CHKERRQ(ierr);
- ierr = PetscOptionsReal("-mat_umfpack_aggressive","Control[UMFPACK_AGGRESSIVE]","None",lu->Control[UMFPACK_AGGRESSIVE],&lu->Control[UMFPACK_AGGRESSIVE],PETSC_NULL);CHKERRQ(ierr);
-
-@@ -291,7 +289,6 @@
- ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_DENSE_ROW]: %g\n",lu->Control[UMFPACK_DENSE_ROW]);CHKERRQ(ierr);
- ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AMD_DENSE]: %g\n",lu->Control[UMFPACK_AMD_DENSE]);CHKERRQ(ierr);
- ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_BLOCK_SIZE]: %g\n",lu->Control[UMFPACK_BLOCK_SIZE]);CHKERRQ(ierr);
-- ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_2BY2_TOLERANCE]: %g\n",lu->Control[UMFPACK_2BY2_TOLERANCE]);CHKERRQ(ierr);
- ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_FIXQ]: %g\n",lu->Control[UMFPACK_FIXQ]);CHKERRQ(ierr);
- ierr = PetscViewerASCIIPrintf(viewer," Control[UMFPACK_AGGRESSIVE]: %g\n",lu->Control[UMFPACK_AGGRESSIVE]);CHKERRQ(ierr);
-
diff --git a/math/petsc/files/patch-src__mat__impls__rowbs__mpi__mpirowbs.h b/math/petsc/files/patch-src__mat__impls__rowbs__mpi__mpirowbs.h
deleted file mode 100644
index 4deb3db1d37b..000000000000
--- a/math/petsc/files/patch-src__mat__impls__rowbs__mpi__mpirowbs.h
+++ /dev/null
@@ -1,13 +0,0 @@
---- src/mat/impls/rowbs/mpi/mpirowbs.h.orig Sat Oct 2 09:13:29 2004
-+++ src/mat/impls/rowbs/mpi/mpirowbs.h Tue Oct 5 21:58:07 2004
-@@ -5,8 +5,8 @@
- #include "src/mat/matimpl.h"
-
- EXTERN_C_BEGIN
--#include "BSsparse.h"
--#include "BSprivate.h"
-+#include <BSsparse.h>
-+#include <BSprivate.h>
- EXTERN_C_END
-
- /*
diff --git a/math/petsc/files/pkg-message.in b/math/petsc/files/pkg-message.in
deleted file mode 100644
index 9e26616e140e..000000000000
--- a/math/petsc/files/pkg-message.in
+++ /dev/null
@@ -1,5 +0,0 @@
-===================================================
-Before using PETSc, you'll have to set PETSC_DIR to
-%%PETSC_DIR%%
-and eventually PETSC_ARCH to %%PETSC_ARCH%%.
-===================================================
diff --git a/math/petsc/pkg-descr b/math/petsc/pkg-descr
deleted file mode 100644
index 7206a4e3e40d..000000000000
--- a/math/petsc/pkg-descr
+++ /dev/null
@@ -1,9 +0,0 @@
-PETSc, the Portable, Extensible Toolkit for Scientific computation, provides
-sets of tools for the parallel (as well as serial), numerical solution of PDEs
-that require solving large-scale, sparse nonlinear systems of equations. PETSc
-includes nonlinear and linear equation solvers that employ a variety of Newton
-techniques and Krylov subspace methods. PETSc provides several parallel sparse
-matrix formats, including compressed row, block compressed row, and block
-diagonal storage.
-
-WWW: http://www.mcs.anl.gov/petsc/
diff --git a/math/petsc/pkg-plist b/math/petsc/pkg-plist
deleted file mode 100644
index 8b803a9670a2..000000000000
--- a/math/petsc/pkg-plist
+++ /dev/null
@@ -1,282 +0,0 @@
-%%PFX%%/bin/TOPSGenerator.py
-%%PFX%%/bin/TOPSGenerator.pyc
-%%PFX%%/bin/TOPSGenerator.pyo
-%%PFX%%/bin/TOPSInstaller.py
-%%PFX%%/bin/TOPSInstaller.pyc
-%%PFX%%/bin/TOPSInstaller.pyo
-%%PFX%%/bin/adiforfix.py
-%%PFX%%/bin/adiforfix.pyc
-%%PFX%%/bin/adiforfix.pyo
-%%PFX%%/bin/adprocess.py
-%%PFX%%/bin/adprocess.pyc
-%%PFX%%/bin/adprocess.pyo
-%%PFX%%/bin/chibaoutput
-%%PFX%%/bin/config/acconfig.h
-%%PFX%%/bin/config/aclocal.m4
-%%PFX%%/bin/config/config.guess
-%%PFX%%/bin/config/config.sub
-%%PFX%%/bin/config/findftnlibs
-%%PFX%%/bin/config/install-sh
-%%PFX%%/bin/configarch
-%%PFX%%/bin/hostnames.chiba
-%%PFX%%/bin/matlab/@freader/close.m
-%%PFX%%/bin/matlab/@freader/freader.m
-%%PFX%%/bin/matlab/@freader/read.m
-%%PFX%%/bin/matlab/@sreader/close.m
-%%PFX%%/bin/matlab/@sreader/read.m
-%%PFX%%/bin/matlab/@sreader/sreader.m
-%%PFX%%/bin/matlab/PetscBagRead.m
-%%PFX%%/bin/matlab/PetscBinaryRead.m
-%%PFX%%/bin/matlab/PetscBinaryWrite.m
-%%PFX%%/bin/matlab/PetscReadBinaryMatlab.m
-%%PFX%%/bin/matlab/launch.m
-%%PFX%%/bin/mpiexec.chiba
-%%PFX%%/bin/mpiexec.gmalloc
-%%PFX%%/bin/mpiexec.lam
-%%PFX%%/bin/mpiexec.llrun
-%%PFX%%/bin/mpiexec.poe
-%%PFX%%/bin/mpiexec.prun
-%%PFX%%/bin/mpiexec.sshsync
-%%PFX%%/bin/mpiexec.uni
-%%PFX%%/bin/mpiexec.valgrind
-%%PFX%%/bin/parseargs.py
-%%PFX%%/bin/parseargs.pyc
-%%PFX%%/bin/parseargs.pyo
-%%PFX%%/bin/petsc_libtool
-%%PFX%%/bin/petscmpiexec
-%%PFX%%/bin/popup
-%%PFX%%/bin/portabilitycheck.py
-%%PFX%%/bin/portabilitycheck.pyc
-%%PFX%%/bin/portabilitycheck.pyo
-%%PFX%%/bin/processSummary.py
-%%PFX%%/bin/processSummary.pyc
-%%PFX%%/bin/processSummary.pyo
-%%PFX%%/bin/taucc.py
-%%PFX%%/bin/taucc.pyc
-%%PFX%%/bin/taucc.pyo
-%%PFX%%/bin/update.py
-%%PFX%%/bin/update.pyc
-%%PFX%%/bin/update.pyo
-%%PFX%%/bin/urlget
-%%PFX%%/bin/urlget.py
-%%PFX%%/bin/urlget.pyc
-%%PFX%%/bin/urlget.pyo
-%%PFX%%/bin/win32fe/win32fe.exe
-%%PFX%%/bin/win32fe/win32feutils.dll
-%%PFX%%/bmake/adic.init
-%%PFX%%/bmake/adicmf.init
-%%PFX%%/bmake/adicmfb.init
-%%PFX%%/bmake/common/base
-%%PFX%%/bmake/common/rules
-%%PFX%%/bmake/common/rules.shared.basic
-%%PFX%%/bmake/common/test
-%%PFX%%/bmake/common/variables
-%%PFX%%/bmake/%%TARGET%%/RDict.db
-%%PFX%%/bmake/%%TARGET%%/configure.py
-%%PFX%%/bmake/%%TARGET%%/configure.pyc
-%%PFX%%/bmake/%%TARGET%%/configure.pyo
-%%PFX%%/bmake/%%TARGET%%/petscconf
-%%PFX%%/bmake/%%TARGET%%/petscconf.h
-%%PFX%%/bmake/%%TARGET%%/petscconfiginfo.h
-%%PFX%%/bmake/%%TARGET%%/petscfix.h
-%%PFX%%/bmake/%%TARGET%%/petscmachineinfo.h
-%%PFX%%/bmake/%%TARGET%%/petscrules
-%%PFX%%/bmake/petscconf
-%%PFX%%/include/adic/ad_deriv.h
-%%PFX%%/include/adic/ad_deriv.h.html
-%%PFX%%/include/adic/ad_grad.h
-%%PFX%%/include/adic/ad_grad.h.html
-%%PFX%%/include/adic/ad_grad_daxpy.h
-%%PFX%%/include/adic/ad_grad_daxpy.h.html
-%%PFX%%/include/adic/ad_grad_macro_axpys.h
-%%PFX%%/include/adic/ad_grad_macro_axpys.h.html
-%%PFX%%/include/adic/ad_utils.h
-%%PFX%%/include/adic/ad_utils.h.html
-%%PFX%%/include/adic/adintr_proto.h
-%%PFX%%/include/adic/adintr_proto.h.html
-%%PFX%%/include/adic/adintrinsics.h
-%%PFX%%/include/adic/adintrinsics.h.html
-%%PFX%%/include/adic/initcommon.h
-%%PFX%%/include/adic/initcommon.h.html
-%%PFX%%/include/adic/initenum.h
-%%PFX%%/include/adic/initenum.h.html
-%%PFX%%/include/adic/knr-compat.h
-%%PFX%%/include/adic/knr-compat.h.html
-%%PFX%%/include/adic/run-alloc.h
-%%PFX%%/include/adic/run-alloc.h.html
-%%PFX%%/include/adic/run-map.h
-%%PFX%%/include/adic/run-map.h.html
-%%PFX%%/include/finclude/index.html
-%%PFX%%/include/finclude/makefile
-%%PFX%%/include/finclude/makefile.html
-%%PFX%%/include/finclude/moddeps
-%%PFX%%/include/finclude/petsc.h
-%%PFX%%/include/finclude/petsc.h.html
-%%PFX%%/include/finclude/petscall.h
-%%PFX%%/include/finclude/petscall.h90
-%%PFX%%/include/finclude/petscao.h
-%%PFX%%/include/finclude/petscao.h.html
-%%PFX%%/include/finclude/petscbag.h
-%%PFX%%/include/finclude/petscda.h
-%%PFX%%/include/finclude/petscda.h.html
-%%PFX%%/include/finclude/petscda.h90
-%%PFX%%/include/finclude/petscda.h90.html
-%%PFX%%/include/finclude/petscdef.h
-%%PFX%%/include/finclude/petscdef.h.html
-%%PFX%%/include/finclude/petscdraw.h
-%%PFX%%/include/finclude/petscdraw.h.html
-%%PFX%%/include/finclude/petscerror.h
-%%PFX%%/include/finclude/petscis.h
-%%PFX%%/include/finclude/petscis.h.html
-%%PFX%%/include/finclude/petscis.h90
-%%PFX%%/include/finclude/petscis.h90.html
-%%PFX%%/include/finclude/petscksp.h
-%%PFX%%/include/finclude/petscksp.h.html
-%%PFX%%/include/finclude/petsclog.h
-%%PFX%%/include/finclude/petsclog.h.html
-%%PFX%%/include/finclude/petscmat.h
-%%PFX%%/include/finclude/petscmat.h.html
-%%PFX%%/include/finclude/petscmat.h90
-%%PFX%%/include/finclude/petscmat.h90.html
-%%PFX%%/include/finclude/petscmesh.h
-%%PFX%%/include/finclude/petscmesh.h90
-%%PFX%%/include/finclude/petscmg.h
-%%PFX%%/include/finclude/petscmg.h.html
-%%PFX%%/include/finclude/petscpc.h
-%%PFX%%/include/finclude/petscpc.h.html
-%%PFX%%/include/finclude/petscsnes.h
-%%PFX%%/include/finclude/petscsnes.h.html
-%%PFX%%/include/finclude/petscsys.h
-%%PFX%%/include/finclude/petscsys.h.html
-%%PFX%%/include/finclude/petscts.h
-%%PFX%%/include/finclude/petscts.h.html
-%%PFX%%/include/finclude/petscvec.h
-%%PFX%%/include/finclude/petscvec.h.html
-%%PFX%%/include/finclude/petscvec.h90
-%%PFX%%/include/finclude/petscvec.h90.html
-%%PFX%%/include/finclude/petscviewer.h
-%%PFX%%/include/finclude/petscviewer.h.html
-%%PFX%%/include/finclude/petscviewer.h90
-%%PFX%%/include/index.html
-%%PFX%%/include/makefile
-%%PFX%%/include/makefile.html
-%%PFX%%/include/mpiuni/mpi.h
-%%PFX%%/include/mpiuni/mpi.h.html
-%%PFX%%/include/mpiuni/mpif.h
-%%PFX%%/include/mpiuni/mpif.h.html
-%%PFX%%/include/petsc.h
-%%PFX%%/include/petsc.h.html
-%%PFX%%/include/petsc/petsc.h
-%%PFX%%/include/petsc/vec.h
-%%PFX%%/include/petscadic.h
-%%PFX%%/include/petscao.h
-%%PFX%%/include/petscao.h.html
-%%PFX%%/include/petscbag.h
-%%PFX%%/include/petscbag.h.html
-%%PFX%%/include/petscblaslapack.h
-%%PFX%%/include/petscblaslapack.h.html
-%%PFX%%/include/petscblaslapack_c.h
-%%PFX%%/include/petscblaslapack_caps.h
-%%PFX%%/include/petscblaslapack_cptofcd.h
-%%PFX%%/include/petscblaslapack_stdcall.h
-%%PFX%%/include/petscblaslapack_uscore.h
-%%PFX%%/include/petscbt.h
-%%PFX%%/include/petscbt.h.html
-%%PFX%%/include/petscctable.h
-%%PFX%%/include/petscda.h
-%%PFX%%/include/petscda.h.html
-%%PFX%%/include/petscdmmg.h
-%%PFX%%/include/petscdmmg.h.html
-%%PFX%%/include/petscdraw.h
-%%PFX%%/include/petscdraw.h.html
-%%PFX%%/include/petscerror.h
-%%PFX%%/include/petscerror.h.html
-%%PFX%%/include/petscis.h
-%%PFX%%/include/petscis.h.html
-%%PFX%%/include/petscksp.h
-%%PFX%%/include/petscksp.h.html
-%%PFX%%/include/petsclog.h
-%%PFX%%/include/petsclog.h.html
-%%PFX%%/include/petscmat.h
-%%PFX%%/include/petscmat.h.html
-%%PFX%%/include/petscmath.h
-%%PFX%%/include/petscmath.h.html
-%%PFX%%/include/petscmatlab.h
-%%PFX%%/include/petscmatlab.h.html
-%%PFX%%/include/petscmesh.h
-%%PFX%%/include/petscmg.h
-%%PFX%%/include/petscmg.h.html
-%%PFX%%/include/petscoptions.h
-%%PFX%%/include/petscoptions.h.html
-%%PFX%%/include/petscpc.h
-%%PFX%%/include/petscpc.h.html
-%%PFX%%/include/petscpf.h
-%%PFX%%/include/petscpf.h.html
-%%PFX%%/include/petscsnes.h
-%%PFX%%/include/petscsnes.h.html
-%%PFX%%/include/petscsys.h
-%%PFX%%/include/petscsys.h.html
-%%PFX%%/include/petsctime.h
-%%PFX%%/include/petsctime.h.html
-%%PFX%%/include/petscts.h
-%%PFX%%/include/petscts.h.html
-%%PFX%%/include/petscvec.h
-%%PFX%%/include/petscvec.h.html
-%%PFX%%/include/petscversion.h
-%%PFX%%/include/petscversion.h.html
-%%PFX%%/include/petscviewer.h
-%%PFX%%/include/petscviewer.h.html
-%%PFX%%/include/private/isimpl.h
-%%PFX%%/include/private/isimpl.h.html
-%%PFX%%/include/private/kspimpl.h
-%%PFX%%/include/private/kspimpl.h.html
-%%PFX%%/include/private/matimpl.h
-%%PFX%%/include/private/matimpl.h.html
-%%PFX%%/include/private/meshimpl.h
-%%PFX%%/include/private/pcimpl.h
-%%PFX%%/include/private/pcimpl.h.html
-%%PFX%%/include/private/petscimpl.h
-%%PFX%%/include/private/petscimpl.h.html
-%%PFX%%/include/private/snesimpl.h
-%%PFX%%/include/private/snesimpl.h.html
-%%PFX%%/include/private/tsimpl.h
-%%PFX%%/include/private/tsimpl.h.html
-%%PFX%%/include/private/vecimpl.h
-%%PFX%%/include/private/vecimpl.h.html
-%%PFX%%/include/zpetsc.h
-%%PFX%%/include/zpetsc.h.html
-%%MPIUNI%%%%PFX%%/lib/%%TARGET%%/libmpiuni.a
-%%PFX%%/lib/%%TARGET%%/libpetsc.a
-%%PFX%%/lib/%%TARGET%%/libpetsc.so
-%%PFX%%/lib/%%TARGET%%/libpetsccontrib.a
-%%PFX%%/lib/%%TARGET%%/libpetsccontrib.so
-%%PFX%%/lib/%%TARGET%%/libpetscdm.a
-%%PFX%%/lib/%%TARGET%%/libpetscdm.so
-%%PFX%%/lib/%%TARGET%%/libpetscksp.a
-%%PFX%%/lib/%%TARGET%%/libpetscksp.so
-%%PFX%%/lib/%%TARGET%%/libpetscmat.a
-%%PFX%%/lib/%%TARGET%%/libpetscmat.so
-%%PFX%%/lib/%%TARGET%%/libpetscsnes.a
-%%PFX%%/lib/%%TARGET%%/libpetscsnes.so
-%%PFX%%/lib/%%TARGET%%/libpetscts.a
-%%PFX%%/lib/%%TARGET%%/libpetscts.so
-%%PFX%%/lib/%%TARGET%%/libpetscvec.a
-%%PFX%%/lib/%%TARGET%%/libpetscvec.so
-@dirrm %%PFX%%/lib/%%TARGET%%
-@dirrm %%PFX%%/lib
-@dirrm %%PFX%%/include/private
-@dirrm %%PFX%%/include/petsc
-@dirrm %%PFX%%/include/mpiuni
-@dirrm %%PFX%%/include/finclude
-@dirrm %%PFX%%/include/adic
-@dirrm %%PFX%%/include
-@dirrm %%PFX%%/bmake/%%TARGET%%
-@dirrm %%PFX%%/bmake/common
-@dirrm %%PFX%%/bmake
-@dirrm %%PFX%%/bin/win32fe
-@dirrm %%PFX%%/bin/matlab/@sreader
-@dirrm %%PFX%%/bin/matlab/@freader
-@dirrm %%PFX%%/bin/matlab
-@dirrm %%PFX%%/bin/config
-@dirrm %%PFX%%/bin
-@dirrm %%PFX%%
diff --git a/math/sdpa-gmp/Makefile b/math/sdpa-gmp/Makefile
deleted file mode 100644
index 556897903dfb..000000000000
--- a/math/sdpa-gmp/Makefile
+++ /dev/null
@@ -1,46 +0,0 @@
-# Created by: NAKATA, Maho <maho@FreeBSD.org>
-# $FreeBSD$
-
-PORTNAME= sdpa-gmp
-PORTVERSION= 7.1.2
-PORTREVISION= 5
-CATEGORIES= math
-MASTER_SITES= http://sdpa.indsys.chuo-u.ac.jp/sdpa/files/
-DISTFILES= ${SRCFILE} ${MANUALFILE}
-DIST_SUBDIR= sdpa
-EXTRACT_ONLY= ${SRCFILE}
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Multi precision arithmetic version of math/sdpa
-
-NO_STAGE= yes
-.include <bsd.port.pre.mk>
-
-SRCDATE= 20091005
-MANDATE= 20080618
-MANUALVER= 7.1.1
-SRCFILE= ${PORTNAME}.${PORTVERSION}.src.${SRCDATE}.tar.gz
-MANUALFILE= sdpa.${MANUALVER}.manual.${MANDATE}.pdf
-GNU_CONFIGURE= yes
-LIB_DEPENDS+= libspooles.so:${PORTSDIR}/math/spooles \
- libgmp.so:${PORTSDIR}/math/gmp \
- libmpfr.so:${PORTSDIR}/math/mpfr
-
-CONFIGURE_ARGS+= --with-system-spooles
-CPPFLAGS+= -I${LOCALBASE}/include -I${LOCALBASE}/include/spooles
-LDFLAGS+= -L${LOCALBASE}/lib
-CFLAGS+= -I${LOCALBASE}/include -I${LOCALBASE}/include/spooles
-CXXFLAGS+= -I${LOCALBASE}/include -I${LOCALBASE}/include/spooles
-
-PLIST_SUB+= MANUALFILE=${MANUALFILE}
-
-do-install:
- ${INSTALL_PROGRAM} ${WRKSRC}/sdpa_gmp ${PREFIX}/bin
- @${MKDIR} ${DATADIR}
- ${INSTALL_DATA} ${WRKSRC}/param.sdpa ${DATADIR}
-.if !defined(NOPORTDOCS)
- @${MKDIR} ${DOCSDIR}
- ${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/${MANUALFILE} ${DOCSDIR}
-.endif
-
-.include <bsd.port.post.mk>
diff --git a/math/sdpa-gmp/distinfo b/math/sdpa-gmp/distinfo
deleted file mode 100644
index 602c34fa9320..000000000000
--- a/math/sdpa-gmp/distinfo
+++ /dev/null
@@ -1,4 +0,0 @@
-SHA256 (sdpa/sdpa-gmp.7.1.2.src.20091005.tar.gz) = 47012f929f7a8e7f65a87929b4ff16a955f24ced51d37f7f5fd710bbba9a912b
-SIZE (sdpa/sdpa-gmp.7.1.2.src.20091005.tar.gz) = 4715397
-SHA256 (sdpa/sdpa.7.1.1.manual.20080618.pdf) = b6bec5b0e1fc8f010522dac7dc2b092b72006e86f07aae904a3ce2b410313d8a
-SIZE (sdpa/sdpa.7.1.1.manual.20080618.pdf) = 258725
diff --git a/math/sdpa-gmp/pkg-descr b/math/sdpa-gmp/pkg-descr
deleted file mode 100644
index ce6ed45a1b14..000000000000
--- a/math/sdpa-gmp/pkg-descr
+++ /dev/null
@@ -1,10 +0,0 @@
-The SDPA-GMP (The GMP version of SemiDefinite Programming Algorithm)
-is a software package for solving semidefinite program (SDP), intended
-for very hard to solve SDPs and SDPs requires ultra high accuracy.
-It is based on a Mehrotra-type predictor-corrector infeasible
-primal-dual interior-point method. The SDPA-GMP shares the same
-features as the SDPA, excpt for calculations will be done
-with multiple precision arithmetics via the GMP
-(the GNU Multiple Precision Arithmetic Library).
-
-WWW: http://sdpa.indsys.chuo-u.ac.jp/sdpa/index.html
diff --git a/math/sdpa-gmp/pkg-plist b/math/sdpa-gmp/pkg-plist
deleted file mode 100644
index 7400e5de37be..000000000000
--- a/math/sdpa-gmp/pkg-plist
+++ /dev/null
@@ -1,5 +0,0 @@
-bin/sdpa_gmp
-share/sdpa-gmp/param.sdpa
-@dirrm share/sdpa-gmp
-%%PORTDOCS%%%%DOCSDIR%%/%%MANUALFILE%%
-%%PORTDOCS%%@dirrm %%DOCSDIR%%
diff --git a/math/sedumi/Makefile b/math/sedumi/Makefile
deleted file mode 100644
index 9786e47e78f4..000000000000
--- a/math/sedumi/Makefile
+++ /dev/null
@@ -1,49 +0,0 @@
-# Created by: NAKATA, Maho <maho@FreeBSD.org>
-# $FreeBSD$
-
-PORTNAME= sedumi
-PORTVERSION= 1.1
-PORTREVISION= 7
-CATEGORIES= math
-MASTER_SITES= ${MASTER_SITE_LOCAL:S|%SUBDIR%|maho/sedumi|}
-# http://sedumi.mcmaster.ca/
-DISTNAME= SeDuMi_1_1R3
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= SeDuMi is an semidefinite programming solver on Matlab
-
-RUN_DEPENDS= octave:${PORTSDIR}/math/octave
-BUILD_DEPENDS= octave:${PORTSDIR}/math/octave
-
-USES= zip
-WRKSRC= ${WRKDIR}/SeDuMi_1_1
-
-NO_STAGE= yes
-pre-patch:
- @${LS} ${WRKSRC}/*.m ${WRKSRC}/*.c > ${WRKDIR}/FILELIST
- @for i in `${CAT} ${WRKDIR}/FILELIST`; do \
- cd ${WRKSRC} ; ${REINPLACE_CMD} -e 's# ##g' $$i ; \
- done
- @cd ${WRKSRC} ; ${RM} *.bak
-
-pre-build:
- @cd ${WRKSRC} ; ${RM} *.dll *.orig
-
-do-build:
- cd ${WRKSRC} ; octave install_sedumi.m
- @cd ${WRKSRC} ; ${RM} *.c *.o
-
-do-install:
- ${MKDIR} ${PREFIX}/sedumi
- ${INSTALL_PROGRAM} ${WRKSRC}/*mex ${PREFIX}/sedumi
- ${INSTALL_DATA} ${WRKSRC}/*m ${PREFIX}/sedumi
-.ifndef (NOPORTDOCS)
- ${MKDIR} ${DOCSDIR}
- ${INSTALL_DATA} ${WRKSRC}/*.txt ${DOCSDIR}
- ${INSTALL_DATA} ${WRKSRC}/doc/* ${DOCSDIR}
-.endif
-.ifndef (NOPORTEXAMPLES)
- ${MKDIR} ${EXAMPLESDIR}
- ${INSTALL_DATA} ${WRKSRC}/examples/* ${EXAMPLESDIR}
-.endif
-.include <bsd.port.mk>
diff --git a/math/sedumi/distinfo b/math/sedumi/distinfo
deleted file mode 100644
index 2f83f0292c3e..000000000000
--- a/math/sedumi/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (SeDuMi_1_1R3.zip) = a81ca3a00b87e3a1cced26d8b340f90bb170e050513ec219acbc90da0a330b22
-SIZE (SeDuMi_1_1R3.zip) = 2235915
diff --git a/math/sedumi/files/patch-and_or b/math/sedumi/files/patch-and_or
deleted file mode 100644
index 2d3675f769cf..000000000000
--- a/math/sedumi/files/patch-and_or
+++ /dev/null
@@ -1,318 +0,0 @@
---- checkpars.m 2008-10-06 10:28:27.000000000 +0900
-+++ checkpars.m 2008-10-06 10:28:59.000000000 +0900
-@@ -41,7 +41,7 @@
- % --------------------------------------------------
- % Algorithm selection parameters
- % --------------------------------------------------
--if ~isfield(pars,'alg') | sum([0 1 2] == pars.alg) == 0
-+if ~isfield(pars,'alg') || sum([0 1 2] == pars.alg) == 0
- pars.alg = 2;
- end
- if ~isfield(pars,'beta') % 0.1 <= beta <= 0.9 (theoretically in (0,1))
-@@ -88,7 +88,7 @@
- % --------------------------------------------------
- % Initialization
- % --------------------------------------------------
--if ~isfield(pars,'mu') | pars.mu <= 0
-+if ~isfield(pars,'mu') || pars.mu <= 0
- pars.mu = 1;
- end
- % --------------------------------------------------
-
---- getsymbada.m 2008-10-06 10:28:27.000000000 +0900
-+++ getsymbada.m 2008-10-06 10:34:06.000000000 +0900
-@@ -42,7 +42,7 @@
-
- Alpq = spones(extractA(At,Ablkjc,0,3,1,psdblkstart(1)));
- Ablks = findblks(At,Ablkjc,3,[],psdblkstart);
--if spars(Ablks)==1 | spars(Alpq)==1 | (~isempty(DAt.q) & spars(DAt.q)==1)
-+if spars(Ablks)==1 || spars(Alpq)==1 || (~isempty(DAt.q) && spars(DAt.q)==1)
- SYMBADA=sparse(ones(size(At,2),size(At,2)));
- else
- SYMBADA = Alpq' * Alpq + Ablks'*Ablks + DAt.q'*DAt.q;
-
---- optstep.m 2008-10-06 10:28:27.000000000 +0900
-+++ optstep.m 2008-10-06 10:30:28.000000000 +0900
-@@ -48,7 +48,7 @@
- z0 = x0 / d.l(1);
- %This value is never used.
- %deptol = 1E-10 * max(x0,z0);
-- if (feasratio < -0.5) & (x0 < z0*z0)
-+ if (feasratio < -0.5) && (x0 < z0*z0)
- x0 = 0; % Try project onto direction.
- end
- % ------------------------------------------------------------
-@@ -82,7 +82,7 @@
- % ----------------------------------------
- % CHECK WHETHER x[B] >= 0 AND WHETHER RESIDUAL DID NOT DETERIORATE.
- % ----------------------------------------
-- if (min(x) < 0.0) | ...
-+ if (min(x) < 0.0) || ...
- (norm(err.b,inf) > 5 * max(max(y0,1e-10 * x0) * R.maxb, y0 * R.maxRb))
- x = []; % Incorrect guess of LP-basis
- return
-@@ -111,7 +111,7 @@
- cx = c'*x;
- by = b'*y;
- z0 = by - cx; %[JFS 9/2003: changed condition below
-- if (~isempty(lpNB) & (min(z(lpNB)) < 0.0)) | ...
-+ if (~isempty(lpNB) && (min(z(lpNB)) < 0.0)) || ...
- normzB > 5 * max(1E-10 * (x0+(x0==0)) * norm(c), min(y0,1e-8) * norm(R.c))
- x = []; % Incorrect guess of LP-basis
- return
-
---- posttransfo.m 2008-10-06 10:28:27.000000000 +0900
-+++ posttransfo.m 2008-10-06 10:34:23.000000000 +0900
-@@ -82,7 +82,7 @@
- % ----------------------------------------
- % Postprocess the SDP part
- % ----------------------------------------
--if pars.sdp==1 & isfield(prep,'sdp')
-+if pars.sdp==1 && isfield(prep,'sdp')
- xpf(1:K.f,1)=xp(1:K.f);
- xp=xp(K.f+1:end);
- Kf=K.f;
-
---- pretransfo.m 2008-10-06 10:28:27.000000000 +0900
-+++ pretransfo.m 2008-10-06 10:37:11.000000000 +0900
-@@ -43,14 +43,14 @@
- K.f = 0;
- elseif isempty(K.f)
- K.f = 0;
--elseif (K.f~= floor(K.f)) | (K.f < 0)
-+elseif (K.f~= floor(K.f)) || (K.f < 0)
- error('K.f should be nonnegative integer')
- end
- if ~isfield(K,'l') % K.l
- K.l = 0;
- elseif isempty(K.l)
- K.l = 0;
--elseif (K.l~= floor(K.l)) | (K.l < 0)
-+elseif (K.l~= floor(K.l)) || (K.l < 0)
- error('K.l should be nonnegative integer')
- end
- if ~isfield(K,'q') % K.q
-@@ -58,7 +58,7 @@
- elseif sum(K.q) == 0
- K.q = [];
- elseif ~isempty(K.q)
-- if (min(K.q) < 2) | any(K.q~= floor(K.q))
-+ if (min(K.q) < 2) || any(K.q~= floor(K.q))
- error('K.q should contain only integers bigger than 1')
- end
- if size(K.q,1) > 1
-@@ -70,7 +70,7 @@
- elseif sum(K.r) == 0
- K.r = [];
- elseif ~isempty(K.r)
-- if (min(K.r) < 3) | any(K.r~= floor(K.r))
-+ if (min(K.r) < 3) || any(K.r~= floor(K.r))
- error('K.r should contain only integers bigger than 2')
- end
- if size(K.r,1) > 1
-@@ -82,7 +82,7 @@
- elseif sum(K.s) == 0
- K.s = [];
- elseif ~isempty(K.s)
-- if min(K.s < 1) | any(K.s~= floor(K.s))
-+ if min(K.s < 1) || any(K.s~= floor(K.s))
- error('K.s should contain only positive integers')
- end
- if size(K.s,1) > 1
-@@ -95,7 +95,7 @@
- if ~isfield(K,'ycomplex') % K.ycomplex
- K.ycomplex = [];
- elseif ~isempty(K.ycomplex)
-- if (min(K.ycomplex) < 1) | (min(size(K.ycomplex)) > 1) | ...
-+ if (min(K.ycomplex) < 1) || (min(size(K.ycomplex)) > 1) || ...
- any(K.ycomplex~= floor(K.ycomplex))
- error('K.ycomplex should be a list containing only positive integers')
- end
-@@ -109,7 +109,7 @@
- if ~isfield(K,'xcomplex') % K.xcomplex
- K.xcomplex = [];
- elseif ~isempty(K.xcomplex)
-- if (min(K.xcomplex) < 1) | (min(size(K.xcomplex))) > 1 | ...
-+ if (min(K.xcomplex) < 1) || (min(size(K.xcomplex))) > 1 || ...
- any(K.xcomplex~= floor(K.xcomplex))
- error('K.xcomplex should be a list containing only positive integers')
- end
-@@ -123,7 +123,7 @@
- if ~isfield(K,'scomplex') % K.scomplex
- K.scomplex = [];
- elseif ~isempty(K.scomplex)
-- if min(K.scomplex) < 1 | min(size(K.scomplex)) > 1 | ...
-+ if min(K.scomplex) < 1 || min(size(K.scomplex)) > 1 || ...
- any(K.scomplex~= floor(K.scomplex))
- error('K.scomplex should be a list containing only positive integers')
- end
-@@ -138,7 +138,7 @@
- % Check size of At,b,c (w.r.t. K)
- % Let m = #eq-constraints, N = #variables (before transformations)
- % ----------------------------------------
--if (min(size(b)) > 1) | (min(size(c)) > 1)
-+if (min(size(b)) > 1) || (min(size(c)) > 1)
- error('Parameters b and c must be vectors')
- end
- m = min(size(At));
-@@ -175,16 +175,16 @@
- % ------------------------------------------------------------
- % Check for NaN and Inf
- % ------------------------------------------------------------
--if any(any(isnan(At))) | any(isnan(b)) | any(isnan(c))
-+if any(any(isnan(At))) || any(isnan(b)) || any(isnan(c))
- error('A,b,c data contains NaN values')
- end
--if any(any(isinf(At))) | any(isinf(b)) | any(isinf(c))
-+if any(any(isinf(At))) || any(isinf(b)) || any(isinf(c))
- error('A,b,c data contains Inf values')
- end
- % ------------------------------------------------------------
- % Save the standardized data for further use if needed
- % ------------------------------------------------------------
--if isfield(pars,'errors') & pars.errors==1
-+if isfield(pars,'errors') && pars.errors==1
- origcoeff.At=At;
- origcoeff.c=c;
- origcoeff.b=b;
-@@ -271,7 +271,7 @@
- if ~isfield(pars,'free')
- pars.free=1;
- end
--if pars.free & K.l>0
-+if pars.free && K.l>0
- stest=c(K.f+1:K.f+K.l)-At(K.f+1:K.f+K.l,:)*rand(m,1);
- %Now we detect if stest contains the same vector twice, or opposite
- %vectors.
-
---- sedumi.m 2008-10-06 10:28:27.000000000 +0900
-+++ sedumi.m 2008-10-06 10:35:24.000000000 +0900
-@@ -293,10 +293,10 @@
- my_fprintf(pars.fid,'Detected %i diagonal SDP block(s) with %i linear variables\n',blockcount,varcount);
- end
- end
-- if isfield(prep,'freeblock1') & length(prep.freeblock1)>0
-+ if isfield(prep,'freeblock1') && length(prep.freeblock1)>0
- my_fprintf(pars.fid,'Detected %i free variables in the linear part\n',length(prep.freeblock1));
- end
-- if isfield(prep,'Kf') & prep.Kf>0
-+ if isfield(prep,'Kf') && prep.Kf>0
- switch pars.free
- case 0
- my_fprintf(pars.fid,'Split %i free variables\n',prep.Kf);
-@@ -384,9 +384,9 @@
- keyboard
- end
-
-- if pars.stepdif==2 & ...
-- (iter>20 | (iter>1 & (err.kcg + Lsd.kcg>3)) | ...
-- (iter>5 & abs(1-feasratio)<0.05) )
-+ if pars.stepdif==2 && ...
-+ (iter>20 || (iter>1 && (err.kcg + Lsd.kcg>3)) || ...
-+ (iter>5 && abs(1-feasratio)<0.05) )
- pars.stepdif=1;
- end
- % --------------------------------------------------
-@@ -438,7 +438,7 @@
- meritOld = merit;
- merit = (sum(R.w) + max(R.sd,0))^2 * y0 / R.b0;
- rate = merit / meritOld;
-- if (rate >= 0.9999) & (wr.desc == 1)
-+ if (rate >= 0.9999) && (wr.desc == 1)
- % ------------------------------------------------------------
- % STOP = -1 --> Stop due to numerical problems
- % ------------------------------------------------------------
-@@ -470,7 +470,7 @@
- % If we get in superlinear region of LP,
- % try to guess optimal solution:
- % ----------------------------------------
-- if lponly & (rate < 0.05)
-+ if lponly && (rate < 0.05)
- [xsol,ysol] = optstep(A,b,c, y0,y,d,v,dxmdz, ...
- K,L,symLden,dense, Ablkjc,Aord,ADA,DAt, feasratio, R,pars);
- if ~isempty(xsol)
-@@ -478,7 +478,7 @@
- feasratio = 1 - 2*(xsol(1)==0);
- break
- end
-- elseif (by > 0) & (abs(1+feasratio) < 0.05) & (R.b0*y0 < 0.5)
-+ elseif (by > 0) && (abs(1+feasratio) < 0.05) && (R.b0*y0 < 0.5)
- if max(eigK(full(qreshape(Amul(A,dense,y,1),1,K)),K)) <= pars.eps * by
- STOP = 3; % Means Farkas solution found !
- break
-@@ -576,7 +576,7 @@
- % If the quality of the Farkas solution is good and better than
- % the approx. feasible soln, set x0=0: Farkas solution found.
- % ------------------------------------------------------------
-- if (reldirinf < pars.eps) | (relinf > max(pars.bigeps, reldirinf))
-+ if (reldirinf < pars.eps) || (relinf > max(pars.bigeps, reldirinf))
- x0 = 0.0;
- pinf = pdirinf;
- dinf = ddirinf;
-@@ -654,7 +654,7 @@
- my_fprintf(pars.fid, 'Failed: no sensible solution/direction found.\n');
- info.numerr = 2;
- elseif STOP == -1
-- if (pinf > -pars.eps * cx) & (dinf > pars.eps * by)
-+ if (pinf > -pars.eps * cx) && (dinf > pars.eps * by)
- info.numerr = 1;
- else
- info.numerr = 0;
-
---- stepdif.m 2008-10-06 10:28:27.000000000 +0900
-+++ stepdif.m 2008-10-06 10:35:37.000000000 +0900
-@@ -61,7 +61,7 @@
- % CASE Rsd > 0: gap constraint locally part of merit.
- % CASE Rsd < 0: gap constraint locally not part of merit.
- % ------------------------------------------------------------
--usegap = (R.sd > 0) | (R.sd == 0 & dRg > 0);
-+usegap = (R.sd > 0) || (R.sd == 0 && dRg > 0);
- if usegap
- r0 = R.w(1)+R.w(2)+R.sd;
- beta = (rdy0 * R.w(1) + rcdx)/ r0;
-diff -u widelen.m widelen.m
---- widelen.m 2008-10-06 10:28:27.000000000 +0900
-+++ widelen.m 2008-10-06 10:32:16.000000000 +0900
-@@ -71,7 +71,7 @@
- % ------------------------------------------------------------
- t = 0.0;
- ntry = 0; % do loop at least once
--while (t < 0.5 * tR) | ( (fullt-tR) + (1e-7 * fullt) < (tR - t) ) | ntry==0
-+while (t < 0.5 * tR) || ( (fullt-tR) + (1e-7 * fullt) < (tR - t) ) || ntry==0
- ntry = 1;
- if tR == maxt % Bisection
- tM = 0.1 * t + 0.9 * tR;
-@@ -105,7 +105,7 @@
- % ALL:
- wM.lab = [xM(1:K.l).*zM(1:K.l); detxz ./ lab2q; lab2q; psdeig(wM.s,K)];
- [deltaM,hM,alphaM] = iswnbr(wM.lab, thetaSQR);
-- if (deltaM <= pars.beta) | ((tM < fullt / 10) & (deltaM < 1))
-+ if (deltaM <= pars.beta) || ((tM < fullt / 10) && (deltaM < 1))
- w = wM;
- t = tM;
- wr.h=hM;
-
---- wregion.m 2008-10-06 10:45:27.000000000 +0900
-+++ wregion.m 2008-10-06 10:45:48.000000000 +0900
-@@ -62,9 +62,9 @@
- [uzc.u,zispos] = psdfactor(zc,K);
- critval = max(y0, sqrt(min(d.l(1),1/d.l(1)))*v(1)); % >= y0
- critval = max(1E-3, pars.cg.restol) * critval * R.maxRb;
-- if (~xispos) | (~zispos) | (errc.maxb > critval) ...
-- | ( (~isempty(uxc.tdet)) & (min(uxc.tdet) <= 0.0)) ...
-- | ( (~isempty(uzc.tdet)) & (min(uzc.tdet) <= 0.0))
-+ if (~xispos) || (~zispos) || (errc.maxb > critval) ...
-+ || ( (~isempty(uxc.tdet)) && (min(uxc.tdet) <= 0.0)) ...
-+ || ( (~isempty(uzc.tdet)) && (min(uzc.tdet) <= 0.0))
- STOP = -1; % Reject and terminate
- dxmdz = [];
- err = errc;
-@@ -121,7 +121,7 @@
- % i.e. errb <= phi*(-dy0) * (1+t*dy0/y0) * maxRb
- % ----------------------------------------
- PHI = 0.5;
-- if dy0 < 0 & (PHI*dy0^2*R.maxRb)~=0
-+ if dy0 < 0 && (PHI*dy0^2*R.maxRb)~=0
- critval = - (PHI * dy0*R.maxRb + err.maxb)*y0c / (PHI*dy0^2*R.maxRb);
- else
- critval = 1;
diff --git a/math/sedumi/files/patch-posttransfo.m b/math/sedumi/files/patch-posttransfo.m
deleted file mode 100644
index 71d858e70c04..000000000000
--- a/math/sedumi/files/patch-posttransfo.m
+++ /dev/null
@@ -1,11 +0,0 @@
---- posttransfo.m~ 2008-10-06 10:55:23.000000000 +0900
-+++ posttransfo.m 2008-10-06 11:04:36.000000000 +0900
-@@ -83,7 +83,7 @@
- % Postprocess the SDP part
- % ----------------------------------------
- if pars.sdp==1 && isfield(prep,'sdp')
-- xpf(1:K.f,1)=xp(1:K.f);
-+ xpf=xp(1:K.f);
- xp=xp(K.f+1:end);
- Kf=K.f;
- K.f=0;
diff --git a/math/sedumi/files/patch-string.h b/math/sedumi/files/patch-string.h
deleted file mode 100644
index c74fb2ed7957..000000000000
--- a/math/sedumi/files/patch-string.h
+++ /dev/null
@@ -1,40 +0,0 @@
---- iswnbr.c~ 2008-10-06 10:47:34.000000000 +0900
-+++ iswnbr.c 2008-10-06 10:51:42.000000000 +0900
-@@ -39,6 +39,7 @@
-
- #include <math.h>
- #include <stdlib.h>
-+#include <string.h>
- #include "mex.h"
-
- #define DELTA_OUT myplhs[0]
---- quadadd.c~ 2008-10-06 10:47:34.000000000 +0900
-+++ quadadd.c 2008-10-06 10:51:34.000000000 +0900
-@@ -39,6 +39,7 @@
- */
- #include <math.h>
- #include "mex.h"
-+#include <string.h>
- #include "blksdp.h"
-
- #define ZHI_OUT myplhs[0]
---- vecsym.c~ 2008-10-06 10:47:34.000000000 +0900
-+++ vecsym.c 2008-10-06 10:51:18.000000000 +0900
-@@ -39,6 +39,7 @@
-
- #include <math.h>
- #include "mex.h"
-+#include <string.h>
- #include "blksdp.h"
-
- #define Y_OUT plhs[0]
---- bwblkslv.c~ 2008-10-06 10:47:33.000000000 +0900
-+++ bwblkslv.c 2008-10-06 10:51:12.000000000 +0900
-@@ -42,6 +42,7 @@
- */
-
- #include "mex.h"
-+#include <string.h>
- #include "blksdp.h"
-
- #define Y_OUT plhs[0]
diff --git a/math/sedumi/pkg-descr b/math/sedumi/pkg-descr
deleted file mode 100644
index 7a34b9d7e457..000000000000
--- a/math/sedumi/pkg-descr
+++ /dev/null
@@ -1,5 +0,0 @@
-SeDuMi is a software package to solve optimization problems over symmetric
-cones. This includes linear, quadratic, second order conic and semidefinite
-optimization, and any combination of these.
-
-WWW: http://sedumi.mcmaster.ca/
diff --git a/math/sedumi/pkg-plist b/math/sedumi/pkg-plist
deleted file mode 100644
index 7c68124852aa..000000000000
--- a/math/sedumi/pkg-plist
+++ /dev/null
@@ -1,154 +0,0 @@
-sedumi/Amul.m
-sedumi/Contents.m
-sedumi/PopK.m
-sedumi/ada_pcg.m
-sedumi/adendotd.m
-sedumi/adendotd.mex
-sedumi/adenscale.mex
-sedumi/asmDxq.m
-sedumi/blkchol.m
-sedumi/blkchol.mex
-sedumi/bwblkslv.m
-sedumi/bwblkslv.mex
-sedumi/bwdpr1.m
-sedumi/bwdpr1.mex
-sedumi/cellK.m
-sedumi/checkpars.m
-sedumi/cholsplit.mex
-sedumi/choltmpsiz.mex
-sedumi/ddot.m
-sedumi/ddot.mex
-sedumi/deninfac.m
-sedumi/dpr1fact.m
-sedumi/dpr1fact.mex
-sedumi/eigK.m
-sedumi/eigK.mex
-sedumi/extractA.m
-sedumi/extractA.mex
-sedumi/eyeK.m
-sedumi/eyeK.mex
-sedumi/factorK.mex
-sedumi/findblks.m
-sedumi/findblks.mex
-sedumi/finsymbden.m
-sedumi/finsymbden.mex
-sedumi/frameit.m
-sedumi/fwblkslv.m
-sedumi/fwblkslv.mex
-sedumi/fwdpr1.m
-sedumi/fwdpr1.mex
-sedumi/getDAt.m
-sedumi/getDAtm.m
-sedumi/getada1.m
-sedumi/getada1.mex
-sedumi/getada2.m
-sedumi/getada2.mex
-sedumi/getada3.m
-sedumi/getada3.mex
-sedumi/getdense.m
-sedumi/getsymbada.m
-sedumi/givensrot.m
-sedumi/givensrot.mex
-sedumi/incorder.m
-sedumi/incorder.mex
-sedumi/install_sedumi.m
-sedumi/invcholfac.m
-sedumi/invcholfac.mex
-sedumi/iswnbr.m
-sedumi/iswnbr.mex
-sedumi/loopPcg.m
-sedumi/makereal.m
-sedumi/makereal.mex
-sedumi/mat.m
-sedumi/maxstep.m
-sedumi/my_fprintf.m
-sedumi/optstep.m
-sedumi/ordmmdmex.m
-sedumi/ordmmdmex.mex
-sedumi/partitA.m
-sedumi/partitA.mex
-sedumi/postprocessSDP.m
-sedumi/posttransfo.m
-sedumi/preprocessSDP.m
-sedumi/pretransfo.m
-sedumi/psdeig.m
-sedumi/psdeig.mex
-sedumi/psdfactor.m
-sedumi/psdfactor.mex
-sedumi/psdframeit.mex
-sedumi/psdinvjmul.m
-sedumi/psdinvjmul.mex
-sedumi/psdinvscale.mex
-sedumi/psdjmul.m
-sedumi/psdjmul.mex
-sedumi/psdscale.m
-sedumi/psdscale.mex
-sedumi/qblkmul.m
-sedumi/qblkmul.mex
-sedumi/qframeit.m
-sedumi/qframev.mex
-sedumi/qinvjmul.m
-sedumi/qinvsqrt.mex
-sedumi/qjmul.m
-sedumi/qrK.mex
-sedumi/qreshape.m
-sedumi/qreshape.mex
-sedumi/qscaleK.mex
-sedumi/quadadd.m
-sedumi/quadadd.mex
-sedumi/rotlorentz.m
-sedumi/sddir.m
-sedumi/sdfactor.m
-sedumi/sdinit.m
-sedumi/sedumi.m
-sedumi/sortnnz.m
-sedumi/sortnnz.mex
-sedumi/sparbwslv.m
-sedumi/sparfwslv.m
-sedumi/spars.m
-sedumi/sqrtinv.m
-sedumi/sqrtinv.mex
-sedumi/statsK.m
-sedumi/statsK.mex
-sedumi/stepdif.m
-sedumi/symbbwblk.mex
-sedumi/symbchol.m
-sedumi/symbcholden.m
-sedumi/symbfwblk.mex
-sedumi/symfctmex.m
-sedumi/symfctmex.mex
-sedumi/tdet.m
-sedumi/triumtriu.m
-sedumi/triumtriu.mex
-sedumi/trydif.m
-sedumi/updtransfo.m
-sedumi/urotorder.m
-sedumi/urotorder.mex
-sedumi/vec.m
-sedumi/veccomplex.m
-sedumi/vecsym.m
-sedumi/vecsym.mex
-sedumi/vectril.m
-sedumi/vectril.mex
-sedumi/whichcpx.m
-sedumi/whichcpx.mex
-sedumi/widelen.m
-sedumi/wrapPcg.m
-sedumi/wregion.m
-@dirrm sedumi
-%%PORTDOCS%%%%DOCSDIR%%/Changelog.txt
-%%PORTDOCS%%%%DOCSDIR%%/Install.txt
-%%PORTDOCS%%%%DOCSDIR%%/Readme.txt
-%%PORTDOCS%%%%DOCSDIR%%/SeDuMi_Guide_105R5.pdf
-%%PORTDOCS%%%%DOCSDIR%%/SeDuMi_Guide_105R5.ps
-%%PORTDOCS%%%%DOCSDIR%%/SeDuMi_Guide_11.pdf
-%%PORTDOCS%%%%DOCSDIR%%/SeDuMi_Guide_11.ps
-%%PORTDOCS%%%%DOCSDIR%%/Version.txt
-%%PORTDOCS%%@dirrm %%DOCSDIR%%
-%%PORTEXAMPLES%%%%EXAMPLESDIR%%/Examples.txt
-%%PORTEXAMPLES%%%%EXAMPLESDIR%%/OH_2Pi_STO-6GN9r12g1T2.mat
-%%PORTEXAMPLES%%%%EXAMPLESDIR%%/arch0.mat
-%%PORTEXAMPLES%%%%EXAMPLESDIR%%/control07.mat
-%%PORTEXAMPLES%%%%EXAMPLESDIR%%/nb.mat
-%%PORTEXAMPLES%%%%EXAMPLESDIR%%/trto3.mat
-%%PORTEXAMPLES%%@dirrm %%EXAMPLESDIR%%
diff --git a/math/unixstat/Makefile b/math/unixstat/Makefile
deleted file mode 100644
index b24b58be9b30..000000000000
--- a/math/unixstat/Makefile
+++ /dev/null
@@ -1,53 +0,0 @@
-# Created by: mwm
-# $FreeBSD$
-
-PORTNAME= unixstat
-PORTVERSION= 5.4
-PORTREVISION= 1
-CATEGORIES= math
-MASTER_SITES= # must fetch manually
-DISTNAME= stat
-EXTRACT_SUFX= .tar.Z
-
-MAINTAINER= ports@FreeBSD.org
-COMMENT= Statistics package designed for use with the Unix shell
-
-RESTRICTED= License does not allow mass redistribution.
-
-NO_STAGE= yes
-.include <bsd.port.pre.mk>
-
-EXTRACT_CMD= uncompress
-EXTRACT_BEFORE_ARGS=-c
-EXTRACT_AFTER_ARGS=| ${TAR} -xf -
-
-MAN1= abut.1 anova.1 calc.1 colex.1 contab.1 desc.1 dm.1 dprime.1 \
- dsort.1 features.1 ff.1 fls.1 fpack.1 linex.1 maketrix.1 \
- manstat.1 oneway.1 pair.1 perm.1 probdist.1 rankind.1 \
- rankrel.1 ranksort.1 regress.1 repeat.1 reverse.1 series.1 \
- stats.1 transpose.1 ts.1 unixstat.1 validata.1
-
-.if !exists(${DISTDIR}/${DISTNAME}${EXTRACT_SUFX})
-IGNORE= Gary Perlman requires that users agree to his license\
-before he will allow access to the distfile.\
-See his web site at http://www.acm.org/~perlman/stat/ for\
-details. Then put ${DISTNAME}${EXTRACT_SUFX} in\
-${DISTDIR} and run make again
-.endif
-
-post-patch:
- @${MV} ${WRKSRC}/man/intro.1 ${WRKSRC}/man/unixstat.1
- @${RM} ${WRKSRC}/man/cat.1
-
-do-build:
- @(cd ${WRKSRC}/src; ${SETENV} ${MAKE_ENV} make ${MAKE_ARGS})
-
-do-install:
- @${INSTALL_PROGRAM} ${WRKSRC}/bin/* ${PREFIX}/bin
- @${INSTALL_MAN} ${WRKSRC}/man/*.1 ${PREFIX}/man/man1
-.if !defined(NOPORTDOCS)
- @${MKDIR} ${DOCSDIR}
- @${INSTALL_DATA} ${WRKSRC}/handbook/* ${DOCSDIR}
-.endif
-
-.include <bsd.port.post.mk>
diff --git a/math/unixstat/distinfo b/math/unixstat/distinfo
deleted file mode 100644
index 0d1e4cf70528..000000000000
--- a/math/unixstat/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (stat.tar.Z) = 1ea41c4a7350c7bdb50ca7529c2d44819a2b2d73b74c2a98e636829f2964dd34
-SIZE (stat.tar.Z) = 591053
diff --git a/math/unixstat/files/patch-Makefile b/math/unixstat/files/patch-Makefile
deleted file mode 100644
index 9d621641d9b6..000000000000
--- a/math/unixstat/files/patch-Makefile
+++ /dev/null
@@ -1,20 +0,0 @@
---- src/makefile.orig Tue Jun 22 18:00:21 1993
-+++ src/makefile Sun Dec 12 22:51:48 2004
-@@ -14,14 +14,13 @@
- ##########################################################################
-
- DESTDIR=../bin# destination directory
--DESTDIR=../../bin# destination directory
--CFLAGS =-O# C Compiler Options
-+#DESTDIR=../../bin# destination directory
- LINK =$(CC) $(CFLAGS) -o $(DESTDIR)/$@# Generic link command
- LIBS =-lm# libraries needed (math)
--EDITOR =/usr/ucb/vi# editor to call on make edit
-+EDITOR =/usr/bin/vi# editor to call on make edit
- RM =/bin/rm -f# remove forcefully
- MV =/bin/mv# move/rename files
--MAKE =/bin/make# use for recursive makes
-+MAKE =/usr/bin/make# use for recursive makes
-
- MAINS = abut.c anova.c calc.y colex.c contab.c desc.c dm.y dprime.c \
- dsort.c features.c ff.c fpack.c linex.c maketrix.c oneway.c \
diff --git a/math/unixstat/files/patch-src b/math/unixstat/files/patch-src
deleted file mode 100644
index 3aa26aabaf0b..000000000000
--- a/math/unixstat/files/patch-src
+++ /dev/null
@@ -1,82 +0,0 @@
---- src/ff.c.orig Sun Dec 12 22:56:48 2004
-+++ src/ff.c Sun Dec 12 22:59:17 2004
-@@ -911,7 +911,7 @@
-
- strcpy (numbuf, oldexpand (title, gpage, page, file));
- if (Needfls)
-- fls (file, numbuf, answer);
-+ usfls (file, numbuf, answer);
- else
- strcpy (answer, numbuf);
- return (answer);
---- src/fls.c.orig Sun Dec 12 22:59:31 2004
-+++ src/fls.c Sun Dec 12 23:00:12 2004
-@@ -183,7 +183,7 @@
- statstdin (statptr)
- struct stat *statptr;
- {
-- long clock, time ();
-+ long clock ;
- clock = time (0);
- statptr->st_atime = clock;
- statptr->st_mtime = clock;
-@@ -200,7 +200,7 @@
-
- /*FUNCTION fls: formated listing of file */
- Status
--fls (file, format, bptr) /* put formatted file listing in buffer */
-+usfls (file, format, bptr) /* put formatted file listing in buffer */
- char *file; /* name of the file to print */
- char *format; /* print format control string, like printf */
- char *bptr; /* pointer to buffer in which to print stats */
---- src/calc.c.orig Sun Dec 12 23:08:23 2004
-+++ src/calc.c Sun Dec 12 23:11:21 2004
-@@ -1,4 +1,3 @@
--extern char *malloc(), *realloc();
-
- # line 2 "calc.y"
- /* Copyright 1981 Gary Perlman */
-@@ -79,7 +78,7 @@
- double eval (), Answer;
- double *Constant;
- char *getline ();
--FILE *Outfile = stdout;
-+FILE *Outfile;
-
- # line 83 "calc.y"
- typedef union
-@@ -222,6 +221,7 @@
- {
- int i;
- signal (SIGINT, SIG_IGN);
-+ Outfile = stdout;
- if (isatty (fileno (stdin)))
- {
- Interactive = 1;
-*** /tmp/perm.c.orig Sat Jul 14 18:22:36 2007
---- src/perm.c Sat Jul 14 18:23:06 2007
-***************
-*** 19,29 ****
- Boole InfoLimits; /* print program limits */
- Boole InfoOptions; /* print usage information */
-
-! int jpossible Cdecl ((char **array, int n, int * choice, int i));
-! int jgetunused Cdecl ((char **array, int n, int i));
-! int jchoose Cdecl ((char **array, int n, int *choice, int i));
- Status jstrpermut Cdecl ((char **array, int n));
-! void jprint Cdecl ((char *name, char **array, int n));
- void strpermut Cdecl ((char **array, int size));
- int initial Cdecl ((int argc, char **argv));
- void usinfo Cdecl ((void));
---- 19,29 ----
- Boole InfoLimits; /* print program limits */
- Boole InfoOptions; /* print usage information */
-
-! static int jpossible Cdecl ((char **array, int n, int * choice, int i));
-! static int jgetunused Cdecl ((char **array, int n, int i));
-! static int jchoose Cdecl ((char **array, int n, int *choice, int i));
- Status jstrpermut Cdecl ((char **array, int n));
-! static void jprint Cdecl ((char *name, char **array, int n));
- void strpermut Cdecl ((char **array, int size));
- int initial Cdecl ((int argc, char **argv));
- void usinfo Cdecl ((void));
diff --git a/math/unixstat/pkg-descr b/math/unixstat/pkg-descr
deleted file mode 100644
index 8ba48e2ff4f5..000000000000
--- a/math/unixstat/pkg-descr
+++ /dev/null
@@ -1,16 +0,0 @@
-|STAT is a set of about 30 data manipulation and analysis programs
-developed by Gary Perlman at the University of California, San Diego
-and at the Wang Institute. The manipulation programs are general
-utilities that work with other standard programs like sort. The
-analysis programs compute most widely used statistics. |STAT programs
-are designed with the philosophy that individual programs should be
-designed as tools that do one task well and produce output suitable
-for input via pipes to |STAT and other programs. Interactive use is
-supported in the command line interpreter/editor while batch files or
-shell scripts provide a programming language for complex
-analyses. Typical usage involves a pipeline of transformations of data
-followed by input to an analysis program, summarized schematically by:
-
- INPUT DATA | TRANSFORM | ANALYSIS | OUTPUT RESULTS
-
-WWW: http://www.acm.org/~perlman/stat/
diff --git a/math/unixstat/pkg-plist b/math/unixstat/pkg-plist
deleted file mode 100644
index eb94330155a4..000000000000
--- a/math/unixstat/pkg-plist
+++ /dev/null
@@ -1,59 +0,0 @@
-bin/abut
-bin/anova
-bin/calc
-bin/colex
-bin/contab
-bin/desc
-bin/dm
-bin/dprime
-bin/dsort
-bin/features
-bin/ff
-bin/fpack
-bin/linex
-bin/maketrix
-bin/oneway
-bin/pair
-bin/perm
-bin/probdist
-bin/rankind
-bin/rankrel
-bin/ranksort
-bin/regress
-bin/repeat
-bin/reverse
-bin/series
-bin/stats
-bin/transpose
-bin/ts
-bin/validata
-%%PORTDOCS%%%%DOCSDIR%%/!Cover.nr
-%%PORTDOCS%%%%DOCSDIR%%/!Cover.ps
-%%PORTDOCS%%%%DOCSDIR%%/!Cover.txt
-%%PORTDOCS%%%%DOCSDIR%%/0-Preface.nr
-%%PORTDOCS%%%%DOCSDIR%%/0-Preface.ps
-%%PORTDOCS%%%%DOCSDIR%%/1-Introduction.nr
-%%PORTDOCS%%%%DOCSDIR%%/1-Introduction.ps
-%%PORTDOCS%%%%DOCSDIR%%/2-Example.nr
-%%PORTDOCS%%%%DOCSDIR%%/2-Example.ps
-%%PORTDOCS%%%%DOCSDIR%%/3-Conventions.nr
-%%PORTDOCS%%%%DOCSDIR%%/3-Conventions.ps
-%%PORTDOCS%%%%DOCSDIR%%/4-Manipulation.nr
-%%PORTDOCS%%%%DOCSDIR%%/4-Manipulation.ps
-%%PORTDOCS%%%%DOCSDIR%%/5-Analysis.nr
-%%PORTDOCS%%%%DOCSDIR%%/5-Analysis.ps
-%%PORTDOCS%%%%DOCSDIR%%/6-Manuals.nr
-%%PORTDOCS%%%%DOCSDIR%%/6-Manuals.ps
-%%PORTDOCS%%%%DOCSDIR%%/CHANGES
-%%PORTDOCS%%%%DOCSDIR%%/Calc.nr
-%%PORTDOCS%%%%DOCSDIR%%/DM.nr
-%%PORTDOCS%%%%DOCSDIR%%/contents.nr
-%%PORTDOCS%%%%DOCSDIR%%/exam.dat
-%%PORTDOCS%%%%DOCSDIR%%/example.bat
-%%PORTDOCS%%%%DOCSDIR%%/example.txt
-%%PORTDOCS%%%%DOCSDIR%%/handbook.txt
-%%PORTDOCS%%%%DOCSDIR%%/macros
-%%PORTDOCS%%%%DOCSDIR%%/macros.txt
-%%PORTDOCS%%%%DOCSDIR%%/makefile
-%%PORTDOCS%%%%DOCSDIR%%/update.txt
-%%PORTDOCS%%@dirrm %%DOCSDIR%%