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authortcberner <tcberner@FreeBSD.org>2019-10-26 07:41:34 +0800
committertcberner <tcberner@FreeBSD.org>2019-10-26 07:41:34 +0800
commit7ae80d23477d21f401b0e6cd526d3987d1a1fcfe (patch)
tree10b7014104ebd0aaae8e4e402003e77848c50655 /math
parentfe67b3e2768a792fd7e933cd2d6ea95cd9bbec51 (diff)
downloadfreebsd-ports-gnome-7ae80d23477d21f401b0e6cd526d3987d1a1fcfe.tar.gz
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freebsd-ports-gnome-7ae80d23477d21f401b0e6cd526d3987d1a1fcfe.zip
math/gsl: update to 2.6
- math/p5-Math-GSL does not seem to have any upstream activity to make it work with this version -> mark it broken - this also breaks the two consumers of this port - biology/gemma: has a conflict with cblas, and is makred broken. PR: 241363 Exp-run by: antoine
Diffstat (limited to 'math')
-rw-r--r--math/asymptote/Makefile2
-rw-r--r--math/deal.ii/Makefile2
-rw-r--r--math/dieharder/Makefile2
-rw-r--r--math/fflas-ffpack/Makefile2
-rw-r--r--math/giacxcas/Makefile1
-rw-r--r--math/gsl/Makefile3
-rw-r--r--math/gsl/distinfo6
-rw-r--r--math/gsl/pkg-plist22
-rw-r--r--math/labplot/Makefile1
-rw-r--r--math/mandelbulber2/Makefile2
-rw-r--r--math/mathgl/Makefile1
-rw-r--r--math/mcsim/Makefile1
-rw-r--r--math/ocamlgsl/Makefile2
-rw-r--r--math/octave-forge-gsl/Makefile2
-rw-r--r--math/orpie/Makefile2
-rw-r--r--math/p5-Algorithm-KMeans/Makefile1
-rw-r--r--math/p5-Math-GSL/Makefile3
-rw-r--r--math/pspp/Makefile2
-rw-r--r--math/py-cvxopt/Makefile2
-rw-r--r--math/py-pygsl/Makefile2
-rw-r--r--math/py-pygslodeiv2/Makefile2
-rw-r--r--math/rubygem-rb-gsl/Makefile2
22 files changed, 45 insertions, 20 deletions
diff --git a/math/asymptote/Makefile b/math/asymptote/Makefile
index 5eb8c5d991b7..9e1cf5782ac8 100644
--- a/math/asymptote/Makefile
+++ b/math/asymptote/Makefile
@@ -3,7 +3,7 @@
PORTNAME= asymptote
PORTVERSION= 2.56
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MASTER_SITES= SF/${PORTNAME}/${PORTVERSION}
DISTNAME= ${PORTNAME}-${PORTVERSION}.src
diff --git a/math/deal.ii/Makefile b/math/deal.ii/Makefile
index 512f5e98061d..3c4c9c669e06 100644
--- a/math/deal.ii/Makefile
+++ b/math/deal.ii/Makefile
@@ -3,7 +3,7 @@
PORTNAME= deal.II
DISTVERSIONPREFIX= v
DISTVERSION= 9.1.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org
diff --git a/math/dieharder/Makefile b/math/dieharder/Makefile
index 5305a88bfdc0..b41f4077ed7c 100644
--- a/math/dieharder/Makefile
+++ b/math/dieharder/Makefile
@@ -3,7 +3,7 @@
PORTNAME= dieharder
PORTVERSION= 3.31.1
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= math
MASTER_SITES= http://www.phy.duke.edu/~rgb/General/dieharder/ LOCAL/bf
diff --git a/math/fflas-ffpack/Makefile b/math/fflas-ffpack/Makefile
index 4c25ed7a377a..668c936ea5e1 100644
--- a/math/fflas-ffpack/Makefile
+++ b/math/fflas-ffpack/Makefile
@@ -3,7 +3,7 @@
PORTNAME= fflas-ffpack
PORTVERSION= 1.4.3
-PORTREVISION= 16
+PORTREVISION= 17
CATEGORIES= math
MASTER_SITES= http://linalg.org/ LOCAL/bf
diff --git a/math/giacxcas/Makefile b/math/giacxcas/Makefile
index 9ba520146426..66cb48d6faa4 100644
--- a/math/giacxcas/Makefile
+++ b/math/giacxcas/Makefile
@@ -3,6 +3,7 @@
PORTNAME= giacxcas
DISTVERSION= 1.5.0-67
+PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= http://www-fourier.ujf-grenoble.fr/~parisse/debian/dists/stable/main/source/:giac \
http://www-fourier.ujf-grenoble.fr/~parisse/giac/freebsd/
diff --git a/math/gsl/Makefile b/math/gsl/Makefile
index 7cc00fab520b..558da29aee96 100644
--- a/math/gsl/Makefile
+++ b/math/gsl/Makefile
@@ -2,8 +2,7 @@
# $FreeBSD$
PORTNAME= gsl
-PORTVERSION= 2.5
-PORTREVISION= 1
+PORTVERSION= 2.6
CATEGORIES= math
MASTER_SITES= GNU
diff --git a/math/gsl/distinfo b/math/gsl/distinfo
index 51580cef2e74..bbf53b1b2661 100644
--- a/math/gsl/distinfo
+++ b/math/gsl/distinfo
@@ -1,3 +1,3 @@
-TIMESTAMP = 1529158403
-SHA256 (gsl-2.5.tar.gz) = 0460ad7c2542caaddc6729762952d345374784100223995eb14d614861f2258d
-SIZE (gsl-2.5.tar.gz) = 7303881
+TIMESTAMP = 1566551853
+SHA256 (gsl-2.6.tar.gz) = b782339fc7a38fe17689cb39966c4d821236c28018b6593ddb6fd59ee40786a8
+SIZE (gsl-2.6.tar.gz) = 7398548
diff --git a/math/gsl/pkg-plist b/math/gsl/pkg-plist
index de5c97ccdbce..507c6fd2ee47 100644
--- a/math/gsl/pkg-plist
+++ b/math/gsl/pkg-plist
@@ -19,6 +19,10 @@ include/gsl/gsl_block_uint.h
include/gsl/gsl_block_ulong.h
include/gsl/gsl_block_ushort.h
include/gsl/gsl_bspline.h
+include/gsl/gsl_bst.h
+include/gsl/gsl_bst_avl.h
+include/gsl/gsl_bst_rb.h
+include/gsl/gsl_bst_types.h
include/gsl/gsl_cblas.h
include/gsl/gsl_cdf.h
include/gsl/gsl_chebyshev.h
@@ -213,6 +217,20 @@ include/gsl/gsl_splinalg.h
include/gsl/gsl_spline.h
include/gsl/gsl_spline2d.h
include/gsl/gsl_spmatrix.h
+include/gsl/gsl_spmatrix_char.h
+include/gsl/gsl_spmatrix_complex_double.h
+include/gsl/gsl_spmatrix_complex_float.h
+include/gsl/gsl_spmatrix_complex_long_double.h
+include/gsl/gsl_spmatrix_double.h
+include/gsl/gsl_spmatrix_float.h
+include/gsl/gsl_spmatrix_int.h
+include/gsl/gsl_spmatrix_long.h
+include/gsl/gsl_spmatrix_long_double.h
+include/gsl/gsl_spmatrix_short.h
+include/gsl/gsl_spmatrix_uchar.h
+include/gsl/gsl_spmatrix_uint.h
+include/gsl/gsl_spmatrix_ulong.h
+include/gsl/gsl_spmatrix_ushort.h
include/gsl/gsl_statistics.h
include/gsl/gsl_statistics_char.h
include/gsl/gsl_statistics_double.h
@@ -250,8 +268,8 @@ include/gsl/gsl_wavelet.h
include/gsl/gsl_wavelet2d.h
lib/libgsl.a
lib/libgsl.so
-lib/libgsl.so.23
-lib/libgsl.so.23.1.0
+lib/libgsl.so.25
+lib/libgsl.so.25.0.0
lib/libgslcblas.a
lib/libgslcblas.so
lib/libgslcblas.so.0
diff --git a/math/labplot/Makefile b/math/labplot/Makefile
index 7e9dc9c4b4d3..7ebc4a6f079b 100644
--- a/math/labplot/Makefile
+++ b/math/labplot/Makefile
@@ -3,6 +3,7 @@
PORTNAME= labplot
PORTVERSION= 2.7.0
+PORTREVISION= 1
CATEGORIES= math kde
MASTER_SITES= KDE/stable/${PORTNAME}/${PORTVERSION}
diff --git a/math/mandelbulber2/Makefile b/math/mandelbulber2/Makefile
index 761a3363677f..811d6e25db76 100644
--- a/math/mandelbulber2/Makefile
+++ b/math/mandelbulber2/Makefile
@@ -2,7 +2,7 @@
PORTNAME= mandelbulber2
DISTVERSION= 2.19
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MAINTAINER= yuri@FreeBSD.org
diff --git a/math/mathgl/Makefile b/math/mathgl/Makefile
index 8350ddde4c4d..e335ee69ca1b 100644
--- a/math/mathgl/Makefile
+++ b/math/mathgl/Makefile
@@ -2,6 +2,7 @@
PORTNAME= mathgl
DISTVERSION= 2.4.4
+PORTREVISION= 1
CATEGORIES= math graphics
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}%20${PORTVERSION}/
diff --git a/math/mcsim/Makefile b/math/mcsim/Makefile
index 330a9486ecb0..3d2eccca0c51 100644
--- a/math/mcsim/Makefile
+++ b/math/mcsim/Makefile
@@ -3,6 +3,7 @@
PORTNAME= mcsim
PORTVERSION= 6.1.0
+PORTREVISION= 1
CATEGORIES= math
MASTER_SITES= GNU
diff --git a/math/ocamlgsl/Makefile b/math/ocamlgsl/Makefile
index 1bd447fb90b8..6646945c0f6e 100644
--- a/math/ocamlgsl/Makefile
+++ b/math/ocamlgsl/Makefile
@@ -4,7 +4,7 @@
PORTNAME= ocaml-gsl
DISTVERSIONPREFIX=v
DISTVERSION= 1.19.1
-PORTREVISION= 3
+PORTREVISION= 4
CATEGORIES= math
MAINTAINER= michipili@gmail.com
diff --git a/math/octave-forge-gsl/Makefile b/math/octave-forge-gsl/Makefile
index d56b96856660..7078bebad156 100644
--- a/math/octave-forge-gsl/Makefile
+++ b/math/octave-forge-gsl/Makefile
@@ -3,7 +3,7 @@
PORTNAME= octave-forge-gsl
PORTVERSION= 2.1.1
-PORTREVISION= 6
+PORTREVISION= 7
CATEGORIES= math
MAINTAINER= stephen@FreeBSD.org
diff --git a/math/orpie/Makefile b/math/orpie/Makefile
index ac60a9ffa9c9..4440bdeca241 100644
--- a/math/orpie/Makefile
+++ b/math/orpie/Makefile
@@ -3,7 +3,7 @@
PORTNAME= orpie
PORTVERSION= 1.5.2
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES+= math
MASTER_SITES= GENTOO http://pessimization.com/software/orpie/
diff --git a/math/p5-Algorithm-KMeans/Makefile b/math/p5-Algorithm-KMeans/Makefile
index b103d9a37901..bc0ff1c64bac 100644
--- a/math/p5-Algorithm-KMeans/Makefile
+++ b/math/p5-Algorithm-KMeans/Makefile
@@ -2,6 +2,7 @@
PORTNAME= Algorithm-KMeans
PORTVERSION= 2.05
+PORTREVISION= 1
CATEGORIES= math perl5
MASTER_SITES= CPAN
MASTER_SITE_SUBDIR= CPAN:AVIKAK
diff --git a/math/p5-Math-GSL/Makefile b/math/p5-Math-GSL/Makefile
index 4bfaec297e2e..ec50f7aa1fab 100644
--- a/math/p5-Math-GSL/Makefile
+++ b/math/p5-Math-GSL/Makefile
@@ -3,6 +3,7 @@
PORTNAME= Math-GSL
PORTVERSION= 0.40
+PORTREVISION= 1
CATEGORIES= math perl5
MASTER_SITES= CPAN
PKGNAMEPREFIX= p5-
@@ -23,6 +24,8 @@ TEST_DEPENDS= p5-Test-Class>=0.12:devel/p5-Test-Class \
USES= perl5
USE_PERL5= modbuild
+BROKEN= Does not work with gsl-2.6
+
post-install:
${FIND} ${STAGEDIR}${PREFIX}/${SITE_ARCH_REL}/auto/Math/GSL/ -name "*.so" -exec ${STRIP_CMD} {} +
diff --git a/math/pspp/Makefile b/math/pspp/Makefile
index 61c4625a44e3..484d83c25571 100644
--- a/math/pspp/Makefile
+++ b/math/pspp/Makefile
@@ -3,7 +3,7 @@
PORTNAME= pspp
PORTVERSION= 1.2.0
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math
MASTER_SITES= GNU
diff --git a/math/py-cvxopt/Makefile b/math/py-cvxopt/Makefile
index ea31161dfac1..7883a14206cf 100644
--- a/math/py-cvxopt/Makefile
+++ b/math/py-cvxopt/Makefile
@@ -2,7 +2,7 @@
PORTNAME= cvxopt
DISTVERSION= 1.2.3
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math python
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-pygsl/Makefile b/math/py-pygsl/Makefile
index a3444dc33a81..f6dc7d2f190e 100644
--- a/math/py-pygsl/Makefile
+++ b/math/py-pygsl/Makefile
@@ -3,7 +3,7 @@
PORTNAME= pygsl
PORTVERSION= 2.3.0
-PORTREVISION= 4
+PORTREVISION= 5
CATEGORIES= math python
MASTER_SITES= SF/${PORTNAME}/${PORTNAME}/${PORTNAME}-${PORTVERSION}
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/py-pygslodeiv2/Makefile b/math/py-pygslodeiv2/Makefile
index 69d6c7d24e55..f2fe13139443 100644
--- a/math/py-pygslodeiv2/Makefile
+++ b/math/py-pygslodeiv2/Makefile
@@ -2,7 +2,7 @@
PORTNAME= pygslodeiv2
DISTVERSION= 0.9.2
-PORTREVISION= 1
+PORTREVISION= 2
CATEGORIES= math python
MASTER_SITES= CHEESESHOP
PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
diff --git a/math/rubygem-rb-gsl/Makefile b/math/rubygem-rb-gsl/Makefile
index 48cf161b34fb..8dc69f39a637 100644
--- a/math/rubygem-rb-gsl/Makefile
+++ b/math/rubygem-rb-gsl/Makefile
@@ -3,7 +3,7 @@
PORTNAME= gsl
PORTVERSION= 2.1.0.2
-PORTREVISION= 2
+PORTREVISION= 3
CATEGORIES= math rubygems
MASTER_SITES= RG
PKGNAMEPREFIX= rubygem-rb-