Add MPICH-2, an implementation of the Message-Passing Interface (MPI).

The goals of MPICH2 are to provide an MPI implementation for important
platforms, including clusters, SMPs, and massively parallel processors.
It also provides a vehicle for MPI implementation research and for
developing new and better parallel programming environments.

MPICH2 replaces MPICH1 and should be used instead of MPICH1 except for
the case of clusters with heterogeneous data representations.

Note: some regression tests fail with Fortran 90, but the problem has
been solved in 1.0.4-rc1, and 1.0.4 should be available RSN.

Repocopied by:	marcus

13 files changed, 908 insertions, 836 deletions

diff --git a/net/Makefile b/net/Makefile
index 3d224a864f25..7563e69eea31 100644
--- a/net/Makefile
+++ b/net/Makefile
@@ -299,6 +299,7 @@
     SUBDIR += mpd
     SUBDIR += mpd4
     SUBDIR += mpich
+    SUBDIR += mpich2
     SUBDIR += mping
     SUBDIR += mrt
     SUBDIR += mrtg-ping-probe
diff --git a/net/mpich2/Makefile b/net/mpich2/Makefile
index 722a8e819daa..3323e880ae16 100644
--- a/net/mpich2/Makefile
+++ b/net/mpich2/Makefile
@@ -5,209 +5,212 @@
 # $FreeBSD$
 #
 
-PORTNAME=	mpich
-PORTVERSION=	1.2.6
-PORTREVISION=	1
+PORTNAME=	mpich2
+PORTVERSION=	1.0.3
 CATEGORIES=	net parallel
-MASTER_SITES=	ftp://ftp.mcs.anl.gov/pub/mpi/
+MASTER_SITES=	ftp://ftp.mcs.anl.gov/pub/mpi/	\
+		http://www-unix.mcs.anl.gov/mpi/mpich/downloads/
 DIST_SUBDIR=	mpich
+#PATCH_SITES=	ftp://ftp.mcs.anl.gov/pub/mpi/mpich2-patch/
+#PATCHFILES=
 
-PATCH_SITES=	ftp://ftp.mcs.anl.gov/pub/mpi/patch/${PORTVERSION}/
-PATCHFILES=	10039 10243 10246
+MAINTAINER=	thierry@FreeBSD.org
+COMMENT=	A portable implementation of MPI-1 and MPI-2
 
-MAINTAINER=	dbader@ece.unm.edu
-COMMENT=	Message Passing Interface (MPI) Library
+#-----------------------------------------------------------------------
+# You may define these options:
+#
+# - WITHOUT_JAVA	don't build MPE Jumpshot-4
+# - WITHOUT_X11		disable MPE graphics routines
+# - WITHOUT_F90		disable gfortran support
+#-----------------------------------------------------------------------
 
-CONFIGURE_ARGS=	-prefix=${PREFIX}/mpich
+USE_PYTHON=	yes
+USE_PERL5_BUILD=yes
 
-OPTIONS=	X11	"Enable MPE graphics" on \
-		TK	"Build with TK support" on \
-		JAVA	"Build with Java support" off \
-		SSH	"Enable SSH client support" on
+GNU_CONFIGURE=	yes
+CONFIGURE_TARGET=	--build=${MACHINE_ARCH}-portbld-freebsd${OSREL}
+CONFIGURE_ARGS=	--enable-romio
+CONFIGURE_ENV=	PTHREAD_LIBS="${PTHREAD_LIBS}" F77=${F77} FFLAGS=${FFLAGS}
+FFLAGS?=	-O2
+NOCCACHE=	yes
+MAKE_ENV=	CCACHE_DISABLE=yes
 
-.include <bsd.port.pre.mk>
+NO_MTREE=	yes
+INSTALLS_SHLIB=	yes
+
+SUB_FILES=	pkg-message
 
 .if defined(WITHOUT_X11)
-WITHOUT_TK=	yes
-CONFIGURE_ARGS+=--disable-mpe_graphics
+CONFIGURE_ARGS+=	--disable-graphics
+WITHOUT_JAVA=	yes
 PLIST_SUB+=	X11="@comment "
 .else
 USE_XLIB=	yes
-CONFIGURE_ARGS+=--enable-mpe_graphics
 PLIST_SUB+=	X11=""
 .endif
 
-.if defined(WITHOUT_TK)
-CONFIGURE_ARGS+=-mpe_opts="--without-tcldir --without-tkdir --without-wishloc"
-PLIST_SUB+=	TK="@comment "
-.else
-RUN_DEPENDS+=	wish8.4:${PORTSDIR}/x11-toolkits/tk84
-BUILD_DEPENDS+=	wish8.4:${PORTSDIR}/x11-toolkits/tk84
-CONFIGURE_ARGS+=-mpe_opts="--with-wishloc=wish8.4"
-PLIST_SUB+=	TK=""
-.endif
-
-.if defined(WITHOUT_JAVA) || defined(PACKAGE_BUILDING)
+.if defined(WITHOUT_JAVA)
 CONFIGURE_ARGS+=	--without-java
 PLIST_SUB+=	JAVA="@comment "
 .else
 USE_JAVA=	yes
 JAVA_VERSION=	1.4+
-RUN_DEPENDS+=	javavm:${PORTSDIR}/java/javavmwrapper
 BUILD_DEPENDS+=	javavm:${PORTSDIR}/java/javavmwrapper
+RUN_DEPENDS+=	javavm:${PORTSDIR}/java/javavmwrapper
 PLIST_SUB+=	JAVA=""
 .endif
 
-HAS_CONFIGURE=	yes
-
-ALL_TARGET=
-
-MANPREFIX=	${PREFIX}/mpich
-
-MAN1=		MPI.1 cleanipcs.1 mpiCC.1 mpicc.1 mpif77.1 mpif90.1 mpiman.1		\
-		mpireconfig.1 mpirun.1 Jumpshots.1 chp4_servs.1 tstmachines.1
-MAN3=		MPI_File_get_position.3 MPI_File_preallocate.3				\
-		MPI_2DOUBLE_PRECISION.3 MPI_2INT.3 MPI_2INTEGER.3 MPI_2REAL.3		\
-		MPI_ANY_SOURCE.3 MPI_ANY_TAG.3 MPI_Abort.3 MPI_Address.3 MPI_Aint.3	\
-		MPI_Allgatherv.3 MPI_Allreduce.3 MPI_Alltoall.3 MPI_Alltoallv.3		\
-		MPI_ERR_REQUEST.3 MPIO_Wait.3 MPI_Attr_get.3 MPI_Attr_put.3 MPI_BAND.3	\
-		MPI_BOR.3 MPI_BOTTOM.3 MPI_BSEND_OVERHEAD.3 MPI_BXOR.3 MPI_BYTE.3	\
-		MPI_Barrier.3 MPI_Bcast.3 MPI_Bsend_init.3 MPI_Buffer_attach.3		\
-		MPI_Buffer_detach.3 MPI_CART.3 MPI_CHAR.3 MPI_COMM_SELF.3		\
-		MPI_COMM_WORLD.3 MPI_COMPLEX.3 MPI_CONGRUENT.3 MPI_Cancel.3		\
-		MPI_Cart_coords.3 MPI_Cart_create.3 MPI_Cart_get.3 MPI_Cart_map.3	\
-		MPI_Cart_rank.3 MPI_Cart_shift.3 MPI_Cart_sub.3 MPI_Comm_compare.3	\
-		MPI_Comm_create.3 MPI_Comm_dup.3 MPI_Comm_free.3 MPI_Comm_group.3	\
-		MPI_Comm_get_name.3 MPI_Comm_rank.3 MPI_Comm_remote_size.3		\
-		MPI_Comm_size.3 MPI_Comm_split.3 MPI_Comm_set_name.3			\
-		MPI_Comm_test_inter.3 MPI_Copy_function.3 MPI_DATATYPE_NULL.3		\
-		MPI_DOUBLE.3 MPI_DOUBLE_COMPLEX.3 MPI_DOUBLE_INT.3			\
-		MPI_DOUBLE_PRECISION.3 MPI_DUP_FN.3 MPI_Delete_function.3		\
-		MPI_Dims_create.3 MPI_ERROR.3 MPI_ERRORS_ARE_FATAL.3			\
-		MPI_ERRORS_RETURN.3 MPI_ERR_ARG.3 MPI_IO.3 MPI_ERR_BUFFER.3		\
-		MPI_ERR_BUFFER_EXISTS.3 MPI_ERR_COMM.3 MPI_ERR_COMM_INTER.3		\
-		MPI_ERR_COMM_INTRA.3 MPI_ERR_COMM_NULL.3 MPI_ERR_COUNT.3		\
-		MPI_ERR_DIMS.3 MPI_ERR_ERRORCODE.3 MPI_ERR_GROUP.3 MPI_ERR_INIT.3	\
-		MPI_ERR_INTERN.3 MPI_ERR_IN_STATUS.3 MPI_ERR_LASTCODE.3			\
-		MPI_ERR_LIMIT.3 MPI_ERR_NOMATCH.3 MPI_ERR_OP.3 MPI_ERR_NULL.3		\
-		MPI_ERR_PERM_KEY.3 MPI_ERR_PERM_OP.3 MPI_ERR_PERM_TYPE.3		\
-		MPI_ERR_PRE_INIT.3 MPI_ERR_RANK.3 MPI_ERR_ROOT.3 MPI_ERR_TAG.3		\
-		MPI_ERR_TOPOLOGY.3 MPI_ERR_TRUNCATE.3 MPI_ERR_TYPE.3 MPI_ERR_UNKNOWN.3	\
-		MPI_Errhandler_free.3 MPI_Errhandler_get.3 MPI_Errhandler_set.3		\
-		MPI_FLOAT.3 MPI_GRAPH.3 MPI_Error_class.3 MPI_FLOAT_INT.3		\
-		MPI_Finalize.3 MPI_Gather.3 MPI_File_delete.3 MPI_File_f2c.3		\
-		MPI_File_get_amode.3 MPI_File_get_atomicity.3				\
-		MPI_File_get_byte_offset.3 MPI_File_get_group.3				\
-		MPI_File_set_errhandler.3 MPI_File_get_info.3 MPI_File_iread.3		\
-		MPI_File_set_size.3 MPI_File_get_size.3 MPI_File_read.3			\
-		MPI_File_get_view.3 MPI_File_iread_at.3 MPI_File_iread_shared.3		\
-		MPI_File_iwrite.3 MPI_File_iwrite_at.3 MPI_File_iwrite_shared.3		\
-		MPI_File_open.3 MPI_File_read_all.3 MPI_File_read_at_all_begin.3	\
-		MPI_File_read_all_begin.3 MPI_File_read_all_end.3 MPI_File_read_at.3	\
-		MPI_File_read_at_all.3 MPI_File_read_ordered.3 MPI_Info_get_nthkey.3	\
-		MPI_File_read_ordered_begin.3 MPI_File_read_ordered_end.3		\
-		MPI_File_read_shared.3 MPI_File_seek.3 MPI_File_set_atomicity.3		\
-		MPI_File_set_info.3 MPI_File_write.3 MPI_File_sync.3			\
-		MPI_File_write_all.3 MPI_File_write_all_begin.3				\
-		MPI_File_write_all_end.3 MPI_HOST.3 MPI_File_write_at.3			\
-		MPI_File_write_at_all.3 MPI_File_write_at_all_end.3			\
-		MPI_Type_create_subarray.3 MPI_File_write_ordered.3			\
-		MPI_File_write_ordered_end.3 MPI_File_write_shared.3 MPI_Info_c2f.3	\
-		MPI_Info_create.3 MPI_GROUP_EMPTY.3 MPI_GROUP_NULL.3 MPI_Gatherv.3	\
-		MPI_Get_count.3 MPI_Get_elements.3 MPI_Get_processor_name.3		\
-		MPI_Get_version.3 MPI_Graph_create.3 MPI_Graph_get.3 MPI_Graph_map.3	\
-		MPI_Graph_neighbors.3 MPI_Graphdims_get.3 MPI_Group_compare.3		\
-		MPI_Group_difference.3 MPI_Group_excl.3 MPI_Group_free.3		\
-		MPI_Group_incl.3 MPI_Group_intersection.3 MPI_Group_range_excl.3	\
-		MPI_Group_range_incl.3 MPI_Group_rank.3 MPI_Group_size.3		\
-		MPI_Group_translate_ranks.3 MPI_Group_union.3 MPI_Handler_function.3	\
-		MPI_IDENT.3 MPI_INT.3 MPI_INTEGER.3 MPI_INTEGER1.3 MPI_INTEGER2.3	\
-		MPI_INTEGER4.3 MPI_Ibsend.3 MPI_Info_delete.3 MPI_Info_dup.3		\
-		MPIO_Request_c2f.3 MPI_Info_f2c.3 MPI_Info_free.3 MPI_LB.3		\
-		MPI_Info_get_nkeys.3 MPI_Info_get_valuelen.3 MPI_File_get_errhandler.3	\
-		MPI_Info_set.3 MPI_Init.3 MPI_Initialized.3 MPI_Int2handle.3		\
-		MPI_Intercomm_create.3 MPI_Intercomm_merge.3 MPI_Iprobe.3 MPI_Irecv.3	\
-		MPI_Irsend.3 MPI_Isend.3 MPI_Issend.3 MPI_KEYVAL_INVALID.3		\
-		MPI_Keyval_create.3 MPI_Keyval_free.3 MPI_LAND.3 MPI_LOGICAL.3		\
-		MPI_LONG.3 MPI_LONG_DOUBLE.3 MPI_LONG_INT.3 MPI_LONG_LONG_INT.3		\
-		MPI_LOR.3 MPI_LXOR.3 MPI_MAX.3 MPI_MAXLOC.3 MPI_MAX_ERROR_STRING.3	\
-		MPI_MAX_PROCESSOR_NAME.3 MPI_MIN.3 MPI_MINLOC.3 MPI_NULL_COPY_FN.3	\
-		MPI_NULL_DELETE_FN.3 MPI_OP_NULL.3 MPI_Op_create.3 MPI_PACKED.3		\
-		MPI_PROC_NULL.3 MPI_PROD.3 MPI_Pack.3 MPI_Pack_size.3 MPI_Pcontrol.3	\
-		MPI_Probe.3 MPI_REAL.3 MPI_REAL8.3 MPI_REQUEST_NULL.3 MPI_Recv.3	\
-		MPI_Recv_init.3 MPI_Reduce.3 MPI_Rsend.3 MPI_Request_c2f.3		\
-		MPI_Rsend_init.3 MPI_SHORT.3 MPI_SHORT_INT.3 MPI_SIMILAR.3		\
-		MPI_SOURCE.3 MPI_SUCCESS.3 MPI_SUM.3 MPI_Scan.3 MPI_Scatter.3		\
-		MPI_Scatterv.3 MPI_Send.3 MPI_Send_init.3 MPI_Sendrecv.3		\
-		MPI_Sendrecv_replace.3 MPI_Ssend.3 MPI_Ssend_init.3 MPI_Start.3		\
-		MPI_Status_c2f.3 MPI_Status_set_cancelled.3 MPI_Status_set_elements.3	\
-		MPI_TAG.3 MPI_TAG_UB.3 MPI_Test.3 MPI_Test_cancelled.3 MPI_Testall.3	\
-		MPI_Testany.3 MPI_Testsome.3 MPI_Topo_test.3 MPI_Type_contiguous.3	\
-		MPI_Type_create_indexed_block.3 MPI_Init_thread.3 MPI_UB.3		\
-		MPI_Unpack.3 MPI_Type_free.3 MPI_Type_get_envelope.3			\
-		MPI_Type_hindexed.3 MPI_Type_hvector.3 MPI_Type_lb.3 MPI_Type_size.3	\
-		MPI_Type_struct.3 MPI_Type_ub.3 MPI_Type_vector.3 MPI_UNDEFINED.3	\
-		MPI_UNDEFINED_RANK.3 MPI_UNEQUAL.3 MPI_UNSIGNED.3 MPI_UNSIGNED_CHAR.3	\
-		MPI_UNSIGNED_LONG.3 MPI_UNSIGNED_SHORT.3 MPI_User_function.3		\
-		MPI_WTIME_IS_GLOBAL.3 MPI_Wait.3 MPI_Waitall.3 MPI_Waitany.3		\
-		MPI_Waitsome.3 MPI_Wtick.3 MPI_Wtime.3 MPIO_Test.3 Constants.3		\
-		MPI_2COMPLEX.3 MPI_2DOUBLE_COMPLEX.3 MPI_Allgather.3 MPI_Attr_delete.3	\
-		MPI_Bsend.3 MPI_COMM_NULL.3 MPI_Cartdim_get.3 MPI_Comm_remote_group.3	\
-		MPI_ERRHANDLER_NULL.3 MPI_ERR_BAD_ARGS.3 MPI_ERR_EXHAUSTED.3		\
-		MPI_ERR_OTHER.3 MPI_Errhandler_create.3 MPI_Error_string.3		\
-		MPI_Finalized.3 MPI_Graph_neighbors_count.3 MPI_Info_get.3		\
-		MPI_Type_create_darray.3 MPI_LONG_DOUBLE_INT.3 MPI_Op_free.3		\
-		MPI_REAL4.3 MPI_Reduce_scatter.3 MPI_Request_free.3 MPI_Startall.3	\
-		MPI_Type_commit.3 MPI_Type_extent.3 MPI_Type_get_contents.3		\
-		MPI_Type_indexed.3 MPI_File_c2f.3 MPI_File_close.3			\
-		MPI_File_get_position_shared.3 MPI_File_get_type_extent.3		\
-		MPI_File_read_at_all_end.3 MPI_File_seek_shared.3 MPI_File_set_view.3	\
-		MPI_File_write_ordered_begin.3 MPIO_Request_f2c.3			\
-		MPI_File_write_at_all_begin.3
-MAN4=		CLOG_Init.4 CLOG_commtype.4 CLOG_cput.4 CLOG_csync.4			\
-		CLOG_get_new_event.4 CLOG_get_new_state.4 CLOG_init_buffers.4		\
-		CLOG_mergelogs.4 CLOG_mergend.4 CLOG_msgtype.4 CLOG_procbuf.4 MPE.4	\
-		CLOG_newbuff.4 CLOG_reclen.4 CLOG_reinit_buff.4 CLOG_treesetup.4	\
-		MPE_Add_RGB_color.4 MPE_CaptureFile.4 MPE_Close_graphics.4		\
-		MPE_Comm_global_rank.4 MPE_Counter_create.4 MPE_Counter_free.4		\
-		MPE_Counter_nxtval.4 MPE_Decomp1d.4 MPE_Describe_state.4		\
-		MPE_Draw_circle.4 MPE_Draw_line.4 MPE_Draw_logic.4 MPE_Draw_point.4	\
-		MPE_Draw_points.4 MPE_Draw_string.4 MPE_Fill_circle.4			\
-		MPE_Fill_rectangle.4 MPE_Finish_log.4 MPE_GetTags.4			\
-		MPE_IO_Stdout_to_file.4 MPE_Iget_mouse_press.4 MPE_Init_log.4		\
-		MPE_Initialized_logging.4 MPE_Line_thickness.4 MPE_Log_event.4		\
-		MPE_Log_get_event_number.4 MPE_Log_receive.4 MPE_Log_send.4		\
-		MPE_Num_colors.4 MPE_Open_graphics.4 MPE_Print_datatype_pack_action.4	\
-		MPE_Seq_begin.4 MPE_Update.4 MPE_ReturnTags.4 MPE_Seq_end.4		\
-		MPE_Start_log.4 MPE_Stop_log.4 MPE_TagsEnd.4 CLOG_Finalize.4		\
-		CLOG_Output.4 CLOG_nodebuffer2disk.4 CLOG_rectype.4			\
-		MPE_Describe_event.4 MPE_Get_mouse_press.4 MPE_Make_color_array.4	\
-		MPE_Print_datatype_unpack_action.4
-
-# Use ssh instead of rsh
-.if !defined(WITHOUT_SSH)
-.if ${OSVERSION} >= 400016 && exists(/usr/bin/ssh)
-CONFIGURE_ENV+=	RSHCOMMAND="/usr/bin/ssh"
-.elif defined(WITH_SSH) || exists(${LOCALBASE}/bin/ssh)
-RUN_DEPENDS+=	${LOCALBASE}/bin/ssh:${PORTSDIR}/security/ssh
-CONFIGURE_ENV+=	RSHCOMMAND="${LOCALBASE}/bin/ssh"
+.if defined(WITHOUT_F90)
+CONFIGURE_ARGS+=	--disable-f90
+PLIST_SUB+=	F90="@comment "
+.else
+F90=		gfortran41
+BUILD_DEPENDS+=	${F90}:${PORTSDIR}/lang/gfortran
+F90FLAGS+=	-ff2c
+CONFIGURE_ENV+=	F90=${F90} F90FLAGS=${F90FLAGS}
+PLIST_SUB+=	F90=""
 .endif
+
+.if defined(NOPORTDOCS)
+CONFIGURE_ARGS+=	--without-docdir --without-htmldir
+.else
+CONFIGURE_ARGS+=	--with-docdir=${DOCSDIR} --with-htmldir=${DOCSDIR}
 .endif
 
+MAN1=		MPI.1 mpicc.1 mpicxx.1 mpiexec.1 mpif77.1 mpif90.1
+MAN3=		MPI_Abort.3 MPI_Accumulate.3 MPI_Add_error_class.3		\
+		MPI_Add_error_code.3 MPI_Add_error_string.3 MPI_Address.3	\
+		MPI_Allgather.3 MPI_Allgatherv.3 MPI_Alloc_mem.3 MPI_Allreduce.3\
+		MPI_Alltoall.3 MPI_Alltoallv.3 MPI_Alltoallw.3 MPI_Attr_delete.3\
+		MPI_Attr_get.3 MPI_Attr_put.3 MPI_Barrier.3 MPI_Bcast.3		\
+		MPI_Bsend.3 MPI_Bsend_init.3 MPI_Buffer_attach.3		\
+		MPI_Buffer_detach.3 MPI_Cancel.3 MPI_Cart_coords.3		\
+		MPI_Cart_create.3 MPI_Cart_get.3 MPI_Cart_map.3 MPI_Cart_rank.3	\
+		MPI_Cart_shift.3 MPI_Cart_sub.3 MPI_Cartdim_get.3		\
+		MPI_Close_port.3 MPI_Comm_accept.3 MPI_Comm_call_errhandler.3	\
+		MPI_Comm_compare.3 MPI_Comm_connect.3 MPI_Comm_create.3		\
+		MPI_Comm_create_errhandler.3 MPI_Comm_create_keyval.3		\
+		MPI_Comm_delete_attr.3 MPI_Comm_disconnect.3 MPI_Comm_dup.3	\
+		MPI_Comm_free.3 MPI_Comm_free_keyval.3 MPI_Comm_get_attr.3	\
+		MPI_Comm_get_errhandler.3 MPI_Comm_get_name.3			\
+		MPI_Comm_get_parent.3 MPI_Comm_group.3 MPI_Comm_join.3		\
+		MPI_Comm_rank.3 MPI_Comm_remote_group.3 MPI_Comm_remote_size.3	\
+		MPI_Comm_set_attr.3 MPI_Comm_set_errhandler.3			\
+		MPI_Comm_set_name.3 MPI_Comm_size.3 MPI_Comm_spawn.3		\
+		MPI_Comm_spawn_multiple.3 MPI_Comm_split.3 MPI_Comm_test_inter.3\
+		MPI_Dims_create.3 MPI_Errhandler_create.3 MPI_Errhandler_free.3	\
+		MPI_Errhandler_get.3 MPI_Errhandler_set.3 MPI_Error_class.3	\
+		MPI_Error_string.3 MPI_Exscan.3 MPI_File_c2f.3			\
+		MPI_File_call_errhandler.3 MPI_File_close.3			\
+		MPI_File_create_errhandler.3 MPI_File_delete.3 MPI_File_f2c.3	\
+		MPI_File_get_amode.3 MPI_File_get_atomicity.3			\
+		MPI_File_get_byte_offset.3 MPI_File_get_errhandler.3		\
+		MPI_File_get_group.3 MPI_File_get_info.3 MPI_File_get_position.3\
+		MPI_File_get_position_shared.3 MPI_File_get_size.3		\
+		MPI_File_get_type_extent.3 MPI_File_get_view.3 MPI_File_iread.3	\
+		MPI_File_iread_at.3 MPI_File_iread_shared.3 MPI_File_iwrite.3	\
+		MPI_File_iwrite_at.3 MPI_File_iwrite_shared.3 MPI_File_open.3	\
+		MPI_File_preallocate.3 MPI_File_read.3 MPI_File_read_all.3	\
+		MPI_File_read_all_begin.3 MPI_File_read_all_end.3		\
+		MPI_File_read_at.3 MPI_File_read_at_all.3			\
+		MPI_File_read_at_all_begin.3 MPI_File_read_at_all_end.3		\
+		MPI_File_read_ordered.3 MPI_File_read_ordered_begin.3		\
+		MPI_File_read_ordered_end.3 MPI_File_read_shared.3		\
+		MPI_File_seek.3 MPI_File_seek_shared.3 MPI_File_set_atomicity.3	\
+		MPI_File_set_errhandler.3 MPI_File_set_info.3			\
+		MPI_File_set_size.3 MPI_File_set_view.3 MPI_File_sync.3		\
+		MPI_File_write.3 MPI_File_write_all.3 MPI_File_write_all_begin.3\
+		MPI_File_write_all_end.3 MPI_File_write_at.3			\
+		MPI_File_write_at_all.3 MPI_File_write_at_all_begin.3		\
+		MPI_File_write_at_all_end.3 MPI_File_write_ordered.3		\
+		MPI_File_write_ordered_begin.3 MPI_File_write_ordered_end.3	\
+		MPI_File_write_shared.3 MPI_Finalize.3 MPI_Finalized.3		\
+		MPI_Free_mem.3 MPI_Gather.3 MPI_Gatherv.3 MPI_Get.3		\
+		MPI_Get_address.3 MPI_Get_count.3 MPI_Get_elements.3		\
+		MPI_Get_processor_name.3 MPI_Get_version.3 MPI_Graph_create.3	\
+		MPI_Graph_get.3 MPI_Graph_map.3 MPI_Graph_neighbors.3		\
+		MPI_Graph_neighbors_count.3 MPI_Graphdims_get.3			\
+		MPI_Grequest_complete.3 MPI_Grequest_start.3 MPI_Group_compare.3\
+		MPI_Group_difference.3 MPI_Group_excl.3 MPI_Group_free.3	\
+		MPI_Group_incl.3 MPI_Group_intersection.3 MPI_Group_range_excl.3\
+		MPI_Group_range_incl.3 MPI_Group_rank.3 MPI_Group_size.3	\
+		MPI_Group_translate_ranks.3 MPI_Group_union.3 MPI_Ibsend.3	\
+		MPI_Info_create.3 MPI_Info_delete.3 MPI_Info_dup.3		\
+		MPI_Info_free.3 MPI_Info_get.3 MPI_Info_get_nkeys.3		\
+		MPI_Info_get_nthkey.3 MPI_Info_get_valuelen.3 MPI_Info_set.3	\
+		MPI_Init.3 MPI_Init_thread.3 MPI_Initialized.3			\
+		MPI_Intercomm_create.3 MPI_Intercomm_merge.3 MPI_Iprobe.3	\
+		MPI_Irecv.3 MPI_Irsend.3 MPI_Is_thread_main.3 MPI_Isend.3	\
+		MPI_Issend.3 MPI_Keyval_create.3 MPI_Keyval_free.3		\
+		MPI_Lookup_name.3 MPI_Op_create.3 MPI_Op_free.3 MPI_Open_port.3	\
+		MPI_Pack.3 MPI_Pack_external.3 MPI_Pack_external_size.3		\
+		MPI_Pack_size.3 MPI_Pcontrol.3 MPI_Probe.3 MPI_Publish_name.3	\
+		MPI_Put.3 MPI_Query_thread.3 MPI_Recv.3 MPI_Recv_init.3		\
+		MPI_Reduce.3 MPI_Reduce_scatter.3 MPI_Register_datarep.3	\
+		MPI_Request_free.3 MPI_Request_get_status.3 MPI_Rsend.3		\
+		MPI_Rsend_init.3 MPI_Scan.3 MPI_Scatter.3 MPI_Scatterv.3	\
+		MPI_Send.3 MPI_Send_init.3 MPI_Sendrecv.3 MPI_Sendrecv_replace.3\
+		MPI_Ssend.3 MPI_Ssend_init.3 MPI_Start.3 MPI_Startall.3		\
+		MPI_Status_set_cancelled.3 MPI_Status_set_elements.3 MPI_Test.3	\
+		MPI_Test_cancelled.3 MPI_Testall.3 MPI_Testany.3 MPI_Testsome.3	\
+		MPI_Topo_test.3 MPI_Type_commit.3 MPI_Type_contiguous.3		\
+		MPI_Type_create_darray.3 MPI_Type_create_hindexed.3		\
+		MPI_Type_create_hvector.3 MPI_Type_create_indexed_block.3	\
+		MPI_Type_create_keyval.3 MPI_Type_create_resized.3		\
+		MPI_Type_create_struct.3 MPI_Type_create_subarray.3		\
+		MPI_Type_delete_attr.3 MPI_Type_dup.3 MPI_Type_extent.3		\
+		MPI_Type_free.3 MPI_Type_free_keyval.3 MPI_Type_get_attr.3	\
+		MPI_Type_get_contents.3 MPI_Type_get_envelope.3			\
+		MPI_Type_get_extent.3 MPI_Type_get_name.3			\
+		MPI_Type_get_true_extent.3 MPI_Type_hindexed.3			\
+		MPI_Type_hvector.3 MPI_Type_indexed.3 MPI_Type_lb.3		\
+		MPI_Type_match_size.3 MPI_Type_set_attr.3 MPI_Type_set_name.3	\
+		MPI_Type_size.3 MPI_Type_struct.3 MPI_Type_ub.3			\
+		MPI_Type_vector.3 MPI_Unpack.3 MPI_Unpack_external.3		\
+		MPI_Unpublish_name.3 MPI_Wait.3 MPI_Waitall.3 MPI_Waitany.3	\
+		MPI_Waitsome.3 MPI_Win_call_errhandler.3 MPI_Win_complete.3	\
+		MPI_Win_create.3 MPI_Win_create_errhandler.3			\
+		MPI_Win_create_keyval.3 MPI_Win_delete_attr.3 MPI_Win_fence.3	\
+		MPI_Win_free.3 MPI_Win_free_keyval.3 MPI_Win_get_attr.3		\
+		MPI_Win_get_errhandler.3 MPI_Win_get_group.3 MPI_Win_get_name.3	\
+		MPI_Win_lock.3 MPI_Win_post.3 MPI_Win_set_attr.3		\
+		MPI_Win_set_errhandler.3 MPI_Win_set_name.3 MPI_Win_start.3	\
+		MPI_Win_test.3 MPI_Win_unlock.3 MPI_Win_wait.3 MPI_Wtick.3	\
+		MPI_Wtime.3
+
+THREAD2FIX=	configure src/mpid/ch3/channels/ib/configure
+LOCALBASE2FIX=	src/mpe2/src/slog2sdk/trace_rlog/configure	\
+		src/mpe2/src/slog2sdk/trace_sample/configure
+X11BASE2FIX=	src/mpe2/src/graphics/configure
+
+.include <bsd.port.pre.mk>
+
+PREFIX:=	${PREFIX}/${PORTNAME}
+
+pre-configure:
+	${REINPLACE_CMD} -e 's|-lpthread|${PTHREAD_LIBS}|g' ${THREAD2FIX:S|^|${WRKSRC}/|}
+	${REINPLACE_CMD} -e 's|/usr/local|${LOCALBASE}|g' ${LOCALBASE2FIX:S|^|${WRKSRC}/|}
+	${REINPLACE_CMD} -e 's|/usr/X11R6|${X11BASE}|g' ${X11BASE2FIX:S|^|${WRKSRC}/|}
+
 post-install:
-	${CHOWN} -R ${BINOWN}:${BINGRP} ${PREFIX}/mpich/bin ${PREFIX}/mpich/lib
-	${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${PREFIX}/mpich/doc ${PREFIX}/mpich/include	\
-		${PREFIX}/mpich/share
-	${LN} -sf ${PREFIX}/mpich/bin/mpicxx ${PREFIX}/mpich/bin/mpiCC
-	@${RMDIR} ${PREFIX}/mpich/lib/shared ${PREFIX}/mpich/examples/MPI-2-C++
-.if ! defined(WITHOUT_JAVA) && ! defined(PACKAGE_BUILDING)
-	${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${PREFIX}/mpich/logfiles
-.endif
+	@${CHOWN} -R ${SHAREOWN}:${SHAREGRP} ${PREFIX}
+	@${CHOWN} -R ${BINOWN}:${BINGRP} ${PREFIX}/bin
+	@${PYTHON_CMD} ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/bin
+	@${PYTHON_CMD} -O ${PYTHON_LIBDIR}/compileall.py ${PREFIX}/bin
+	@${CAT} ${PKGMESSAGE}
 
 .if defined(MAINTAINER_MODE)
-test:	build
-	(cd ${WRKSRC}/examples/test ;	\
-	${MAKE} testing)
+regression-test:	install
+.if !exists(${HOME}/.mpd.conf)
+	@${ECHO_CMD} "MPD_SECRETWORD=change_on_install" > ${HOME}/.mpd.conf
+	${CHMOD} go-r ${HOME}/.mpd.conf
+	@${ECHO_MSG} "${HOME}/.mpd.conf has been generated - please change the secret word!"
+.endif
+	${PREFIX}/bin/mpd &
+	(cd ${WRKSRC} && \
+	PATH=${PATH}:${PREFIX}/bin ${MAKE} testing)
+	${PREFIX}/bin/mpdallexit
 .endif
 
 .include <bsd.port.post.mk>
diff --git a/net/mpich2/distinfo b/net/mpich2/distinfo
index 9a31905f46d6..da86ca1c7614 100644
--- a/net/mpich2/distinfo
+++ b/net/mpich2/distinfo
@@ -1,12 +1,3 @@
-MD5 (mpich/mpich-1.2.6.tar.gz) = dbf6ea0b5717bbf88851e5bd36aed644
-SHA256 (mpich/mpich-1.2.6.tar.gz) = ad82592411a771253734a92d86918f7ae8e6d02ab0f41c69e49bc0d5b2374599
-SIZE (mpich/mpich-1.2.6.tar.gz) = 15248688
-MD5 (mpich/10039) = 04309cd7e59974ca7dd41c9529309384
-SHA256 (mpich/10039) = d852b5a6e493f701aa55ae6e5bec3f2992b189085ea97fe1a9d5f039b26a395b
-SIZE (mpich/10039) = 913
-MD5 (mpich/10243) = 0cfe2279c645bfb2c7a32295169560a1
-SHA256 (mpich/10243) = 1c45602fc85aa0be342fe5185ace8041aac7e09cbd8e5f245e3738202ff205fe
-SIZE (mpich/10243) = 212
-MD5 (mpich/10246) = 0dab4539aba34898e1b36ef6bc99f9ed
-SHA256 (mpich/10246) = 98f3401032862b67ade18af9bc2ee6e7bdecec5f206bcaf2a71f34c5bb723e53
-SIZE (mpich/10246) = 471
+MD5 (mpich/mpich2-1.0.3.tar.gz) = 6fa6b0f5a290285a90c239127d1eaa58
+SHA256 (mpich/mpich2-1.0.3.tar.gz) = 294717fc05e9d509ed0e45c99709ddba696ad6919c47fc0801a410fe129623df
+SIZE (mpich/mpich2-1.0.3.tar.gz) = 12166368
diff --git a/net/mpich2/files/patch-ab b/net/mpich2/files/patch-ab
deleted file mode 100644
index 67d06a0ffd25..000000000000
--- a/net/mpich2/files/patch-ab
+++ /dev/null
@@ -1,13 +0,0 @@
---- mpid/server/configure.orig	Tue Sep 12 07:57:09 2000
-+++ mpid/server/configure	Tue Sep 12 08:01:11 2000
-@@ -1589,8 +1589,8 @@
- 	    ac_find_inc_dir=$dir
- 	    break
- 	fi
--	if test -r $dir/include/ssl.h ; then
--	    ac_find_inc_dir=$dir/include
-+	if test -r $dir/include/openssl/ssl.h ; then
-+	    ac_find_inc_dir=$dir/include/openssl
- 	    break
- 	fi
- done
diff --git a/net/mpich2/files/patch-configure b/net/mpich2/files/patch-configure
new file mode 100644
index 000000000000..616c1dc32512
--- /dev/null
+++ b/net/mpich2/files/patch-configure
@@ -0,0 +1,13 @@
+--- configure.orig	Wed Nov 23 19:41:50 2005
++++ configure	Mon Jul 17 00:46:50 2006
+@@ -24963,8 +24963,8 @@
+ rm -f conftest.err conftest.$ac_objext \
+       conftest$ac_exeext conftest.$ac_ext
+ if test "$ac_cv_search_pthread_key_create" = no; then
+-  for ac_lib in pthread; do
+-    LIBS="-l$ac_lib  $ac_func_search_save_LIBS"
++  for ac_lib in $PTHREAD_LIBS; do
++    LIBS="$ac_lib  $ac_func_search_save_LIBS"
+     cat >conftest.$ac_ext <<_ACEOF
+ /* confdefs.h.  */
+ _ACEOF
diff --git a/net/mpich2/files/patch-mpid::ch2::chtick.c b/net/mpich2/files/patch-mpid::ch2::chtick.c
deleted file mode 100644
index a12aee39f11f..000000000000
--- a/net/mpich2/files/patch-mpid::ch2::chtick.c
+++ /dev/null
@@ -1,10 +0,0 @@
---- mpid/ch2/chtick.c-orig	Wed Apr  4 09:16:05 2001
-+++ mpid/ch2/chtick.c	Sat Aug 25 08:49:10 2001
-@@ -14,6 +14,7 @@
-       !defined(MPID_CH_Wtime)
- #define USING_POSIX_CLOCK
- #include <time.h>
-+#include <sys/time.h>
- #endif
- /* 
-    This returns a value that is correct but not the best value that
diff --git a/net/mpich2/files/patch-src_env_Makefile.in b/net/mpich2/files/patch-src_env_Makefile.in
new file mode 100644
index 000000000000..097d046dd9b8
--- /dev/null
+++ b/net/mpich2/files/patch-src_env_Makefile.in
@@ -0,0 +1,21 @@
+--- ./src/env/Makefile.in.orig	Wed Nov 23 19:45:48 2005
++++ ./src/env/Makefile.in	Mon Jul 17 10:06:09 2006
+@@ -52,13 +52,13 @@
+ 	if [ ! -d ${DESTDIR}${exec_prefix} ] ; then $(MKDIR_P) ${DESTDIR}${exec_prefix} ; fi
+ 	if [ ! -d ${DESTDIR}${prefix} ] ; then $(MKDIR_P) ${DESTDIR}${prefix} ; fi
+ 	if [ ! -d ${DESTDIR}${bindir} ] ; then $(MKDIR_P) ${DESTDIR}${bindir} ; fi
+-	$(INSTALL_PROGRAM) $(INSTALL_STRIP_FLAG) mpicc ${DESTDIR}${bindir}/mpicc
+-	$(INSTALL_PROGRAM) $(INSTALL_STRIP_FLAG) mpich2version ${DESTDIR}${bindir}/mpich2version
++	$(BSD_INSTALL_SCRIPT) mpicc ${DESTDIR}${bindir}/mpicc
++	$(BSD_INSTALL_SCRIPT) mpich2version ${DESTDIR}${bindir}/mpich2version
+ 	if [ ! -d ${DESTDIR}${sysconfdir} ] ; then $(MKDIR_P) ${DESTDIR}${sysconfdir} ; fi
+ 	$(INSTALL_DATA) mpicc.conf ${DESTDIR}${sysconfdir}/mpicc.conf
+-	if [ -s mpicxx ] ; then $(INSTALL_PROGRAM) $(INSTALL_STRIP_FLAG) mpicxx ${DESTDIR}${bindir}/mpicxx ; fi
+-	if [ -s mpif77 ] ; then $(INSTALL_PROGRAM) $(INSTALL_STRIP_FLAG) mpif77 ${DESTDIR}${bindir}/mpif77 ; fi
+-	if [ -s mpif90 ] ; then $(INSTALL_PROGRAM) $(INSTALL_STRIP_FLAG) mpif90 ${DESTDIR}${bindir}/mpif90 ; fi
++	if [ -s mpicxx ] ; then $(BSD_INSTALL_SCRIPT) mpicxx ${DESTDIR}${bindir}/mpicxx ; fi
++	if [ -s mpif77 ] ; then $(BSD_INSTALL_SCRIPT) mpif77 ${DESTDIR}${bindir}/mpif77 ; fi
++	if [ -s mpif90 ] ; then $(BSD_INSTALL_SCRIPT) mpif90 ${DESTDIR}${bindir}/mpif90 ; fi
+ 	if [ -s mpicxx.conf ] ; then $(INSTALL_DATA) mpicxx.conf ${DESTDIR}${sysconfdir}/mpicxx.conf ; fi
+ 	if [ -s mpif77.conf ] ; then $(INSTALL_DATA) mpif77.conf ${DESTDIR}${sysconfdir}/mpif77.conf ; fi
+ 	if [ -s mpif90.conf ] ; then $(INSTALL_DATA) mpif90.conf ${DESTDIR}${sysconfdir}/mpif90.conf ; fi
diff --git a/net/mpich2/files/patch-src_mpe2_src_slog2sdk_trace_rlog_configure b/net/mpich2/files/patch-src_mpe2_src_slog2sdk_trace_rlog_configure
new file mode 100644
index 000000000000..6f6b47cc68ba
--- /dev/null
+++ b/net/mpich2/files/patch-src_mpe2_src_slog2sdk_trace_rlog_configure
@@ -0,0 +1,10 @@
+--- src/mpe2/src/slog2sdk/trace_rlog/configure.orig	Wed Nov 23 19:43:07 2005
++++ src/mpe2/src/slog2sdk/trace_rlog/configure	Mon Jul 17 20:22:48 2006
+@@ -22562,6 +22562,7 @@
+     /usr/java/j2sdk* \
+     /usr/local \
+     /usr/local/java* \
++    /usr/local/diablo-jdk* \
+     /usr/local/jdk* \
+     /usr/local/j2sdk* \
+     /usr/share \
diff --git a/net/mpich2/files/patch-src_mpe2_src_slog2sdk_trace_sample_configure b/net/mpich2/files/patch-src_mpe2_src_slog2sdk_trace_sample_configure
new file mode 100644
index 000000000000..6938d3a66f74
--- /dev/null
+++ b/net/mpich2/files/patch-src_mpe2_src_slog2sdk_trace_sample_configure
@@ -0,0 +1,10 @@
+--- src/mpe2/src/slog2sdk/trace_sample/configure.orig	Wed Nov 23 19:43:12 2005
++++ src/mpe2/src/slog2sdk/trace_sample/configure	Mon Jul 17 20:32:00 2006
+@@ -22561,6 +22561,7 @@
+     /usr/local \
+     /usr/local/java* \
+     /usr/local/jdk* \
++    /usr/local/diablo-jdk* \
+     /usr/local/j2sdk* \
+     /usr/share \
+     /usr/share/java* \
diff --git a/net/mpich2/files/patch-src_mpi_romio_configure b/net/mpich2/files/patch-src_mpi_romio_configure
new file mode 100644
index 000000000000..8e2678b18d4d
--- /dev/null
+++ b/net/mpich2/files/patch-src_mpi_romio_configure
@@ -0,0 +1,22 @@
+--- src/mpi/romio/configure.orig	Wed Nov 23 19:41:55 2005
++++ src/mpi/romio/configure	Mon Jul 17 01:05:21 2006
+@@ -7482,8 +7482,8 @@
+ rm -f conftest.err conftest.$ac_objext \
+       conftest$ac_exeext conftest.$ac_ext
+ if test "$ac_cv_search_pthread_create" = no; then
+-  for ac_lib in pthread; do
+-    LIBS="-l$ac_lib  $ac_func_search_save_LIBS"
++  for ac_lib in $PTHREAD_LIBS; do
++    LIBS="$ac_lib  $ac_func_search_save_LIBS"
+     cat >conftest.$ac_ext <<_ACEOF
+ /* confdefs.h.  */
+ _ACEOF
+@@ -7527,7 +7527,7 @@
+   ac_status=$?
+   echo "$as_me:$LINENO: \$? = $ac_status" >&5
+   (exit $ac_status); }; }; then
+-  ac_cv_search_pthread_create="-l$ac_lib"
++  ac_cv_search_pthread_create="$ac_lib"
+ break
+ else
+   echo "$as_me: failed program was:" >&5
diff --git a/net/mpich2/files/pkg-message.in b/net/mpich2/files/pkg-message.in
new file mode 100644
index 000000000000..fc10902e5382
--- /dev/null
+++ b/net/mpich2/files/pkg-message.in
@@ -0,0 +1,7 @@
+=======================================================================
+
+MPICH-2 has been installed under %%PREFIX%%.
+
+Please include %%PREFIX%%/bin in your $PATH.
+
+=======================================================================
diff --git a/net/mpich2/pkg-descr b/net/mpich2/pkg-descr
index fac61bdd06fb..12dbf1c70c1c 100644
--- a/net/mpich2/pkg-descr
+++ b/net/mpich2/pkg-descr
@@ -1,8 +1,8 @@
-MPICH is a portable implementation of the MPI (Message Passing
-Interface) standard. The goal of MPI, simply stated, is to develop a
-widely used standard for writing message-passing programs. As such the
-interface should establish a practical, portable, efficient, and
-flexible standard for message passing. Included are a full set of
-documents and parallel programming examples.
+MPICH2 is an implementation of the Message-Passing Interface (MPI).
+
+The goals of MPICH2 are to provide an MPI implementation for important
+platforms, including clusters, SMPs, and massively parallel processors.
+It also provides a vehicle for MPI implementation research and for developing
+new and better parallel programming environments
 
 WWW: http://www.mcs.anl.gov/mpi/mpich/
diff --git a/net/mpich2/pkg-plist b/net/mpich2/pkg-plist
index ba82ed95fcad..2a0def2caa1a 100644
--- a/net/mpich2/pkg-plist
+++ b/net/mpich2/pkg-plist
@@ -1,622 +1,639 @@
-%%JAVA%%mpich/bin/clog2TOslog2
-mpich/bin/clog2alog
-%%JAVA%%mpich/bin/clog2print
-%%JAVA%%mpich/bin/clogTOslog2
-mpich/bin/clog_print
-%%JAVA%%mpich/bin/clogprint
-%%JAVA%%mpich/bin/jumpshot
-%%JAVA%%mpich/bin/logconvertor
-mpich/bin/mpicc
-mpich/bin/mpichversion
-mpich/bin/mpicxx
-@exec ln -sf %D/%F %B/mpiCC
-@unexec rm -f %D/mpich/bin/mpiCC
-mpich/bin/mpif77
-mpich/bin/mpif90
-mpich/bin/mpiman
-mpich/bin/mpireconfig
-mpich/bin/mpireconfig.dat
-mpich/bin/mpirun
-mpich/bin/mpirun.args
-mpich/bin/mpirun.ch_p4
-mpich/bin/mpirun.ch_p4.args
-mpich/bin/mpirun.p4shmem
-mpich/bin/mpirun.pg
-mpich/bin/mpirun.rand
-mpich/bin/mpirun_dbg.dbx
-mpich/bin/mpirun_dbg.ddd
-mpich/bin/mpirun_dbg.gdb
-mpich/bin/mpirun_dbg.ladebug
-mpich/bin/mpirun_dbg.totalview
-mpich/bin/mpirun_dbg.xxgdb
-%%JAVA%%mpich/bin/rlogTOslog2
-%%JAVA%%mpich/bin/rlog_check_timeorder
-%%JAVA%%mpich/bin/rlog_print
-%%JAVA%%mpich/bin/rlogprint
-mpich/bin/serv_p4
-%%JAVA%%mpich/bin/slog2navigator
-%%JAVA%%mpich/bin/slog2print
-mpich/bin/tarch
-mpich/bin/tdevice
-%%JAVA%%mpich/bin/traceTOslog2.in
-%%JAVA%%mpich/bin/traceprint.in
-mpich/doc/mpeman.pdf
-mpich/doc/mpeman.ps.gz
-mpich/doc/mpichman-chp4.pdf
-mpich/doc/mpichman-chp4.ps.gz
-mpich/doc/mpichman-chp4mpd.pdf
-mpich/doc/mpichman-chp4mpd.ps.gz
-mpich/doc/mpichman-chshmem.pdf
-mpich/doc/mpichman-chshmem.ps.gz
-mpich/doc/mpichman-globus2.pdf
-mpich/doc/mpichman-globus2.ps.gz
-mpich/doc/mpiman.ps
-mpich/doc/romio-users.ps.gz
-%%JAVA%%mpich/doc/jumpshot-4/usersguide.pdf
-%%JAVA%%mpich/doc/jumpshot-4/html/Backward24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Convert24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Delete24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Down24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Edit24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Find24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/FindBack24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/FindFore24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Forward24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/HandCloseUpLeft25.png
-%%JAVA%%mpich/doc/jumpshot-4/html/HandOpenUpLeft25.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Help24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Home24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Information24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/New24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Open24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Paste24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Preferences24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Print24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Properties24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/up.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Refresh24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Stop24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/TreeCollapse24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/TreeExpand24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/Up24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/WARNINGS
-%%JAVA%%mpich/doc/jumpshot-4/html/WinRedo.png
-%%JAVA%%mpich/doc/jumpshot-4/html/WinUndo.png
-%%JAVA%%mpich/doc/jumpshot-4/html/ZoomIn24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/ZoomMinusUpLeft25.png
-%%JAVA%%mpich/doc/jumpshot-4/html/ZoomOut24.png
-%%JAVA%%mpich/doc/jumpshot-4/html/ZoomPlusUpLeft25.png
-%%JAVA%%mpich/doc/jumpshot-4/html/adj_row_count.png
-%%JAVA%%mpich/doc/jumpshot-4/html/adj_row_height.png
-%%JAVA%%mpich/doc/jumpshot-4/html/contents.png
-%%JAVA%%mpich/doc/jumpshot-4/html/convertor_init.png
-%%JAVA%%mpich/doc/jumpshot-4/html/convertor_parameters.png
-%%JAVA%%mpich/doc/jumpshot-4/html/convertor_progress.png
-%%JAVA%%mpich/doc/jumpshot-4/html/histogram_arrow.png
-%%JAVA%%mpich/doc/jumpshot-4/html/histogram_arrow_infobox.png
-%%JAVA%%mpich/doc/jumpshot-4/html/histogram_mpi_overhead.png
-%%JAVA%%mpich/doc/jumpshot-4/html/histogram_state_all_cumu_excl.png
-%%JAVA%%mpich/doc/jumpshot-4/html/histogram_state_infobox.png
-%%JAVA%%mpich/doc/jumpshot-4/html/histogram_state_over_incl.png
-%%JAVA%%mpich/doc/jumpshot-4/html/index.html
-%%JAVA%%mpich/doc/jumpshot-4/html/internals.pl
-%%JAVA%%mpich/doc/jumpshot-4/html/labels.pl
-%%JAVA%%mpich/doc/jumpshot-4/html/legend_checkbox_menu.png
-%%JAVA%%mpich/doc/jumpshot-4/html/legend_color_chooser.png
-%%JAVA%%mpich/doc/jumpshot-4/html/legend_name.png
-%%JAVA%%mpich/doc/jumpshot-4/html/legend_popup.png
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-mpich/www/www3/MPI_Type_hvector.html
-mpich/www/www3/MPI_Type_indexed.html
-mpich/www/www3/MPI_Type_lb.html
-mpich/www/www3/MPI_Type_size.html
-mpich/www/www3/MPI_Type_struct.html
-mpich/www/www3/MPI_Type_ub.html
-mpich/www/www3/MPI_Type_vector.html
-mpich/www/www3/MPI_Unpack.html
-mpich/www/www3/MPI_Wait.html
-mpich/www/www3/MPI_Waitall.html
-mpich/www/www3/MPI_Waitany.html
-mpich/www/www3/MPI_Waitsome.html
-mpich/www/www3/MPI_Wtick.html
-mpich/www/www3/MPI_Wtime.html
-mpich/www/www3/index.html
-mpich/www/www4/CLOG_Finalize.html
-mpich/www/www4/CLOG_Init.html
-mpich/www/www4/CLOG_Output.html
-mpich/www/www4/CLOG_commtype.html
-mpich/www/www4/CLOG_cput.html
-mpich/www/www4/CLOG_csync.html
-mpich/www/www4/CLOG_get_new_event.html
-mpich/www/www4/CLOG_get_new_state.html
-mpich/www/www4/CLOG_init_buffers.html
-mpich/www/www4/CLOG_mergelogs.html
-mpich/www/www4/CLOG_mergend.html
-mpich/www/www4/CLOG_msgtype.html
-mpich/www/www4/CLOG_newbuff.html
-mpich/www/www4/CLOG_nodebuffer2disk.html
-mpich/www/www4/CLOG_procbuf.html
-mpich/www/www4/CLOG_reclen.html
-mpich/www/www4/CLOG_rectype.html
-mpich/www/www4/CLOG_reinit_buff.html
-mpich/www/www4/CLOG_treesetup.html
-mpich/www/www4/MPE.html
-mpich/www/www4/MPE_Add_RGB_color.html
-mpich/www/www4/MPE_CaptureFile.html
-mpich/www/www4/MPE_Close_graphics.html
-mpich/www/www4/MPE_Comm_global_rank.html
-mpich/www/www4/MPE_Counter_create.html
-mpich/www/www4/MPE_Counter_free.html
-mpich/www/www4/MPE_Counter_nxtval.html
-mpich/www/www4/MPE_Decomp1d.html
-mpich/www/www4/MPE_Describe_event.html
-mpich/www/www4/MPE_Describe_state.html
-mpich/www/www4/MPE_Draw_circle.html
-mpich/www/www4/MPE_Draw_line.html
-mpich/www/www4/MPE_Draw_logic.html
-mpich/www/www4/MPE_Draw_point.html
-mpich/www/www4/MPE_Draw_points.html
-mpich/www/www4/MPE_Draw_string.html
-mpich/www/www4/MPE_Fill_circle.html
-mpich/www/www4/MPE_Fill_rectangle.html
-mpich/www/www4/MPE_Finish_log.html
-mpich/www/www4/MPE_GetTags.html
-mpich/www/www4/MPE_Get_mouse_press.html
-mpich/www/www4/MPE_IO_Stdout_to_file.html
-mpich/www/www4/MPE_Iget_mouse_press.html
-mpich/www/www4/MPE_Init_log.html
-mpich/www/www4/MPE_Initialized_logging.html
-mpich/www/www4/MPE_Line_thickness.html
-mpich/www/www4/MPE_Log_event.html
-mpich/www/www4/MPE_Log_get_event_number.html
-mpich/www/www4/MPE_Log_receive.html
-mpich/www/www4/MPE_Log_send.html
-mpich/www/www4/MPE_Make_color_array.html
-mpich/www/www4/MPE_Num_colors.html
-mpich/www/www4/MPE_Open_graphics.html
-mpich/www/www4/MPE_Print_datatype_pack_action.html
-mpich/www/www4/MPE_Print_datatype_unpack_action.html
-mpich/www/www4/MPE_ReturnTags.html
-mpich/www/www4/MPE_Seq_begin.html
-mpich/www/www4/MPE_Seq_end.html
-mpich/www/www4/MPE_Start_log.html
-mpich/www/www4/MPE_Stop_log.html
-mpich/www/www4/MPE_TagsEnd.html
-mpich/www/www4/MPE_Update.html
-mpich/www/www4/index.html
-%%JAVA%%@dirrm mpich/doc/jumpshot-4/html/
-%%JAVA%%@dirrm mpich/doc/jumpshot-4/
-@dirrm mpich/www/www4
-@dirrm mpich/www/www3
-@dirrm mpich/www/www1
-@dirrm mpich/www
-@dirrm mpich/share/examples
-@dirrm mpich/share
-@dirrm mpich/sbin
-@dirrm mpich/man/man4
-@dirrm mpich/man/man3
-@dirrm mpich/man/man1
-@dirrm mpich/man
-%%JAVA%%@dirrm mpich/logfiles
-@dirrm mpich/lib
-@dirrm mpich/include/mpi2c++
-@dirrm mpich/include
-@dirrm mpich/examples
-@dirrm mpich/etc
-@dirrm mpich/doc
-@dirrm mpich/bin
-@dirrm mpich
+@comment "PREFIX set to %D/mpich2."
+%%JAVA%%bin/clog2TOslog2
+bin/clog2_print
+%%JAVA%%bin/clog2print
+%%JAVA%%bin/clogTOslog2
+%%JAVA%%bin/clogprint
+%%JAVA%%bin/jumpshot
+%%JAVA%%bin/logconvertor
+bin/mpd
+bin/mpd.py
+bin/mpd.pyc
+bin/mpd.pyo
+bin/mpdallexit
+bin/mpdallexit.py
+bin/mpdallexit.pyc
+bin/mpdallexit.pyo
+bin/mpdboot
+bin/mpdboot.py
+bin/mpdboot.pyc
+bin/mpdboot.pyo
+bin/mpdcheck
+bin/mpdcheck.py
+bin/mpdcheck.pyc
+bin/mpdcheck.pyo
+bin/mpdchkpyver.py
+bin/mpdchkpyver.pyc
+bin/mpdchkpyver.pyo
+bin/mpdcleanup
+bin/mpdcleanup.py
+bin/mpdcleanup.pyc
+bin/mpdcleanup.pyo
+bin/mpdexit
+bin/mpdexit.py
+bin/mpdexit.pyc
+bin/mpdexit.pyo
+bin/mpdgdbdrv.py
+bin/mpdgdbdrv.pyc
+bin/mpdgdbdrv.pyo
+bin/mpdhelp
+bin/mpdhelp.py
+bin/mpdhelp.pyc
+bin/mpdhelp.pyo
+bin/mpdkilljob
+bin/mpdkilljob.py
+bin/mpdkilljob.pyc
+bin/mpdkilljob.pyo
+bin/mpdlib.py
+bin/mpdlib.pyc
+bin/mpdlib.pyo
+bin/mpdlistjobs
+bin/mpdlistjobs.py
+bin/mpdlistjobs.pyc
+bin/mpdlistjobs.pyo
+bin/mpdman.py
+bin/mpdman.pyc
+bin/mpdman.pyo
+bin/mpdringtest
+bin/mpdringtest.py
+bin/mpdringtest.pyc
+bin/mpdringtest.pyo
+bin/mpdroot
+bin/mpdrun
+bin/mpdrun.py
+bin/mpdrun.pyc
+bin/mpdrun.pyo
+bin/mpdsigjob
+bin/mpdsigjob.py
+bin/mpdsigjob.pyc
+bin/mpdsigjob.pyo
+bin/mpdtrace
+bin/mpdtrace.py
+bin/mpdtrace.pyc
+bin/mpdtrace.pyo
+bin/mpicc
+bin/mpich2version
+bin/mpicxx
+bin/mpiexec
+bin/mpiexec.py
+bin/mpiexec.pyc
+bin/mpiexec.pyo
+bin/mpif77
+%%F90%%bin/mpif90
+bin/mpirun
+bin/mpirun.py
+bin/mpirun.pyc
+bin/mpirun.pyo
+%%JAVA%%bin/rlogTOslog2
+%%JAVA%%bin/rlog_check_timeorder
+%%JAVA%%bin/rlog_print
+%%JAVA%%bin/rlogprint
+%%JAVA%%bin/slog2filter
+%%JAVA%%bin/slog2navigator
+%%JAVA%%bin/slog2print
+%%JAVA%%bin/slog2updater
+%%JAVA%%bin/traceTOslog2.in
+%%JAVA%%bin/traceprint.in
+etc/mpe_f77env.conf
+etc/mpe_f77env.conf.in
+%%X11%%etc/mpe_graphics.conf
+etc/mpe_help.conf
+etc/mpe_help.conf.in
+etc/mpe_log.conf
+%%X11%%etc/mpe_mpianim.conf
+etc/mpe_mpicheck.conf
+etc/mpe_mpilog.conf
+etc/mpe_mpitrace.conf
+etc/mpe_nolog.conf
+etc/mpicc.conf
+etc/mpicxx.conf
+etc/mpif77.conf
+%%F90%%etc/mpif90.conf
+examples/cpi
+include/clog_commset.h
+include/clog_uuid.h
+include/mpe.h
+include/mpe_graphics.h
+%%X11%%include/mpe_graphicsf.h
+include/mpe_log.h
+include/mpe_logf.h
+include/mpe_misc.h
+include/mpe_thread.h
+include/mpi.h
+%%F90%%include/mpi.mod
+include/mpicxx.h
+include/mpif.h
+include/mpio.h
+include/mpiof.h
+%%JAVA%%lib/clog2TOdrawable.jar
+%%JAVA%%lib/clog2TOslog2.jar
+%%JAVA%%lib/clog2print.jar
+%%JAVA%%lib/clogTOdrawable.jar
+%%JAVA%%lib/clogTOslog2.jar
+%%JAVA%%lib/clogprint.jar
+%%JAVA%%lib/jumpshot.jar
+%%JAVA%%lib/jumpshot_launcher.jar
+%%JAVA%%lib/libTraceInput.la
+%%JAVA%%lib/libTraceInput.so
+%%X11%%lib/libampe.a
+lib/libfmpich.a
+%%F90%%lib/libmpichf90.a
+lib/liblmpe.a
+lib/libmpe.a
+lib/libmpe_collchk.a
+lib/libmpe_f2cmpi.a
+lib/libmpe_nompi.a
+lib/libmpe_nompi_null.a
+lib/libmpe_null.a
+lib/libmpich.a
+lib/libmpichcxx.a
+lib/libtmpe.a
+%%JAVA%%lib/logconvertor.jar
+lib/mpe_prof.o
+%%JAVA%%lib/slog2filter.jar
+%%JAVA%%lib/slog2navigator.jar
+%%JAVA%%lib/slog2printrecur.jar
+%%JAVA%%lib/slog2printserial.jar
+%%JAVA%%lib/slog2update205to206.jar
+%%JAVA%%lib/traceTOslog2.jar
+%%JAVA%%lib/traceprint.jar
+%%JAVA%%logfiles/barrier.rlog
+%%JAVA%%logfiles/fpilog.clog
+%%JAVA%%logfiles/fpilog.slog2
+sbin/mpeuninstall
+%%PORTDOCS%%%%DOCSDIR%%/index.htm
+%%PORTDOCS%%%%DOCSDIR%%/install.pdf
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/About24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Backward24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Convert24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/ConvertCancel24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/ConvertOk24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Delete24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Down24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Edit24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Find24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/FindBack24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/FindFore24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Forward24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/HandCloseUpLeft25.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/HandOpenUpLeft25.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Help24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Home24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Information24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/New24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Open24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Paste24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Preferences24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Print24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Properties24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Refresh24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Stop24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/TreeCollapse24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/TreeExpand24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/Up24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/WARNINGS
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/WinRedo.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/WinUndo.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/ZoomIn24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/ZoomMinusUpLeft25.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/ZoomOut24.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/ZoomPlusUpLeft25.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/adj_row_count.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/adj_row_height.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/contents.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/convertor_done.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/convertor_init.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/convertor_parameters.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/convertor_progress.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/histogram_arrow.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/histogram_arrow_infobox.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/histogram_mpi_overhead.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/histogram_state_all_cumu_excl.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/histogram_state_infobox.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/histogram_state_over_incl.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/index.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/internals.pl
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/labels.pl
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_checkbox_menu.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_color_chooser.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_name.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_popup.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_s.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_sort_menu.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_topo.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/legend_v.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/main.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/mouse_hand_mode.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/mouse_zoom_mode.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/next.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/next_g.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node1.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node10.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node11.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node12.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node13.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node14.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node15.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node16.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node17.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node18.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node19.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node2.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node20.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node21.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node22.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node23.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node24.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node25.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node26.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node27.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node28.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node29.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node3.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node30.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node31.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node32.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node33.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node34.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node4.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node5.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node6.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node7.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node8.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/node9.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/preference_pview_state.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/prev.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/prev_g.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_infobox_duration.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_infobox_preview_state.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_infobox_real_primitive.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_infobox_time.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_mpi_overhead.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_nesting_detail.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_nesting_legend_innermost.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_nesting_legend_middle.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_nesting_legend_outermost.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_nesting_preview_all.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_popup.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_popup_finer.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_preview_detail_0.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_preview_detail_0_excl.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_preview_detail_1.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_preview_detail_1_excl.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_preview_detail_2.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_preview_detail_3.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_preview_detail_4.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_search_preview.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/timeline_search_preview_zoomed.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/up.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/up_g.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/usersguide.css
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/usersguide.html
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/yaxis_label_panel_expanded.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/html/yaxis_label_panel_simple.png
+%%PORTDOCS%%%%JAVA%%%%DOCSDIR%%/jumpshot-4/usersguide.pdf
+%%PORTDOCS%%%%DOCSDIR%%/logging.pdf
+%%PORTDOCS%%%%DOCSDIR%%/smpd_pmi.pdf
+%%PORTDOCS%%%%DOCSDIR%%/user.pdf
+%%PORTDOCS%%%%DOCSDIR%%/www1/MPI.html
+%%PORTDOCS%%%%DOCSDIR%%/www1/index.htm
+%%PORTDOCS%%%%DOCSDIR%%/www1/mpicc.html
+%%PORTDOCS%%%%DOCSDIR%%/www1/mpicxx.html
+%%PORTDOCS%%%%DOCSDIR%%/www1/mpiexec.html
+%%PORTDOCS%%%%DOCSDIR%%/www1/mpif77.html
+%%PORTDOCS%%%%DOCSDIR%%/www1/mpif90.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Abort.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Accumulate.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Add_error_class.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Add_error_code.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Add_error_string.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Address.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Allgather.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Allgatherv.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Alloc_mem.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Allreduce.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Alltoall.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Alltoallv.html
+%%PORTDOCS%%%%DOCSDIR%%/www3/MPI_Alltoallw.html
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+share/examples_collchk/Makefile
+share/examples_collchk/Makefile.in
+share/examples_collchk/composite.c
+share/examples_collchk/scatterv.c
+share/examples_collchk/time_allreduce.c
+share/examples_collchk/time_alltoallv.c
+share/examples_collchk/time_alltoallv0.c
+share/examples_collchk/time_bcast.c
+share/examples_collchk/wrong_composite.c
+share/examples_collchk/wrong_int_byte.c
+share/examples_collchk/wrong_reals.f
+share/examples_collchk/wrong_root.c
+share/examples_collchk/wrong_scatterv.c
+%%X11%%share/examples_graphics/Makefile
+%%X11%%share/examples_graphics/Makefile.in
+%%X11%%share/examples_graphics/cpi.c
+%%X11%%share/examples_graphics/cxgraphics.c
+%%X11%%share/examples_graphics/fxgraphics.f
+share/examples_logging/Makefile
+share/examples_logging/Makefile.in
+share/examples_logging/comm1_isr.c
+share/examples_logging/comm1_isr_loop.c
+share/examples_logging/cpi.c
+share/examples_logging/cpilog.c
+share/examples_logging/cpilog_pack.c
+share/examples_logging/fcomm1_isr.f
+share/examples_logging/fpilog.f
+share/examples_logging/fpilog_pack.F
+share/examples_logging/iotest.c
+share/examples_logging/srtest.c
+@dirrm share/examples_logging
+%%X11%%@dirrm share/examples_graphics
+@dirrm share/examples_collchk
+%%PORTDOCS%%@dirrm %%DOCSDIR%%/www3
+%%PORTDOCS%%@dirrm %%DOCSDIR%%/www1
+%%JAVA%%%%PORTDOCS%%@dirrm %%DOCSDIR%%/jumpshot-4/html
+%%JAVA%%%%PORTDOCS%%@dirrm %%DOCSDIR%%/jumpshot-4
+%%PORTDOCS%%@dirrm %%DOCSDIR%%
+%%PORTDOCS%%@dirrm share/doc
+@dirrm share
+@dirrm sbin
+@dirrm man/man3
+@dirrm man/man1
+@dirrm man
+%%JAVA%%@dirrm logfiles
+@dirrm lib
+@dirrm include
+@dirrm examples
+@dirrm etc
+@dirrm bin