Deleting science/PETSc: The previously-deleted port math/petsc exists. It will be resurrected and this version will be committed with it.

5 files changed, 0 insertions, 310 deletions

diff --git a/science/PETSc/Makefile b/science/PETSc/Makefile
deleted file mode 100644
index 8a3eacab3da9..000000000000
--- a/science/PETSc/Makefile
+++ /dev/null
@@ -1,39 +0,0 @@
-# Created by: Yuri Victorovich <yuri@FreeBSD.org>
-# $FreeBSD$
-
-PORTNAME=	PETSc
-DISTVERSION=	3.8.3
-CATEGORIES=	science devel
-MASTER_SITES=	http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/
-DISTNAME=	${PORTNAME:tl}-${DISTVERSION}
-
-MAINTAINER=	yuri@FreeBSD.org
-COMMENT=	Suite of data structures and routines from Argonne National Laboratory
-
-LICENSE=	BSD2CLAUSE
-LICENSE_FILE=	${WRKSRC}/LICENSE
-
-LIB_DEPENDS=	libmpich.so:net/mpich2
-
-USES=		blaslapack fortran gmake python shebangfix
-GNU_CONFIGURE=	yes
-CONFIGURE_ARGS=	--with-shared-libraries=1 \
-		--with-mpi-dir=${LOCALBASE} \
-		CFLAGS="${CFLAGS} -msse2" CXXFLAGS="${CXXFLAGS} -msse2" CPPFLAGS="${CPPFLAGS}" \
-		LDFLAGS="${LDFLAGS}" LIBS=""
-USE_XORG=	x11
-MAKEFILE=	makefile
-SHEBANG_FILES=	bin/*.py bin/popup bin/saws/SAWs.py bin/saws/*.bash bin/sendToJenkins
-USE_LDCONFIG=	yes
-BINARY_ALIAS=	python=${PYTHON_CMD}
-
-DATADIR=	${PREFIX}/share/${PORTNAME:tl}
-PLIST_SUB=	SHLIB=${DISTVERSION} SHL=${DISTVERSION:C/\.[0-9]$//}
-
-post-install:
-	@${STRIP_CMD} ${STAGEDIR}${PREFIX}/lib/libpetsc.so.${DISTVERSION}
-	@${FIND} ${STAGEDIR}${PREFIX} \( -name "*.html" -o -name "*.mod" \) -delete
-	@cd ${STAGEDIR}${PREFIX} && ${RM} -r bin/win32fe bin/uncrustify.cfg lib/petsc
-	@${RM} -r ${STAGEDIR}${DATADIR}/examples # examples are a mess as installed
-
-.include <bsd.port.mk>
diff --git a/science/PETSc/distinfo b/science/PETSc/distinfo
deleted file mode 100644
index e268ad0e3986..000000000000
--- a/science/PETSc/distinfo
+++ /dev/null
@@ -1,3 +0,0 @@
-TIMESTAMP = 1513506952
-SHA256 (petsc-3.8.3.tar.gz) = 01f9c3ed937eafac6c9e006510b61c7cd07197115ec40c429fc835f346ca3eac
-SIZE (petsc-3.8.3.tar.gz) = 27931992
diff --git a/science/PETSc/files/patch-makefile b/science/PETSc/files/patch-makefile
deleted file mode 100644
index 7bf1648c0061..000000000000
--- a/science/PETSc/files/patch-makefile
+++ /dev/null
@@ -1,11 +0,0 @@
---- makefile.orig	2017-12-18 03:43:13 UTC
-+++ makefile
-@@ -277,7 +277,7 @@ reconfigure:
- 	@${PYTHON} ${PETSC_ARCH}/lib/petsc/conf/reconfigure-${PETSC_ARCH}.py
- #
- install:
--	@${PYTHON} ./config/install.py -destDir=${DESTDIR}
-+	@${PYTHON} ./config/install.py -destDir=${DESTDIR}${PREFIX}
- 	${OMAKE} PETSC_ARCH=${PETSC_ARCH} PETSC_DIR=${PETSC_DIR} mpi4py-install petsc4py-install
- 
- newall:
diff --git a/science/PETSc/pkg-descr b/science/PETSc/pkg-descr
deleted file mode 100644
index b4fbcfaf59e6..000000000000
--- a/science/PETSc/pkg-descr
+++ /dev/null
@@ -1,7 +0,0 @@
-A suite of data structures and routines for the scalable (parallel) solution of
-scientific applications modeled by partial differential equations. It supports
-MPI, and GPUs through CUDA or OpenCL, as well as hybrid MPI-GPU parallelism.
-PETSc (sometimes called PETSc/Tao) also contains the Tao optimization software
-library.
-
-WWW: http://www.mcs.anl.gov/petsc
diff --git a/science/PETSc/pkg-plist b/science/PETSc/pkg-plist
deleted file mode 100644
index cc25820ab5d5..000000000000
--- a/science/PETSc/pkg-plist
+++ /dev/null
@@ -1,250 +0,0 @@
-bin/FASTMathInstaller.py
-bin/PetscBinaryIO.py
-bin/PetscBinaryIOTrajectory.py
-bin/PetscBinaryIO_tests.py
-bin/TOPSGenerator.py
-bin/adiforfix.py
-bin/configVars.py
-bin/parseargs.py
-bin/petsc-mpiexec.uni
-bin/petsc_conf.py
-bin/petsc_gen_xdmf.py
-bin/petscdiff
-bin/petsclogformat.py
-bin/petscmpiexec
-bin/petscnagupgrade.py
-bin/popup
-bin/portabilitycheck.py
-bin/saws/SAWs.py
-bin/saws/getSAWs.bash
-bin/saws/getStack.bash
-bin/sendToJenkins
-bin/taucc.py
-bin/update.py
-include/petsc.h
-include/petsc/finclude/petsc.h
-include/petsc/finclude/petscao.h
-include/petsc/finclude/petscbag.h
-include/petsc/finclude/petscdm.h
-include/petsc/finclude/petscdmda.h
-include/petsc/finclude/petscdmlabel.h
-include/petsc/finclude/petscdmnetwork.h
-include/petsc/finclude/petscdmplex.h
-include/petsc/finclude/petscdraw.h
-include/petsc/finclude/petscerror.h
-include/petsc/finclude/petscis.h
-include/petsc/finclude/petscksp.h
-include/petsc/finclude/petsclog.h
-include/petsc/finclude/petscmat.h
-include/petsc/finclude/petscpc.h
-include/petsc/finclude/petscsnes.h
-include/petsc/finclude/petscsnesfas.h
-include/petsc/finclude/petscsys.h
-include/petsc/finclude/petsctao.h
-include/petsc/finclude/petscts.h
-include/petsc/finclude/petscvec.h
-include/petsc/finclude/petscviewer.h
-include/petsc/mpiuni/mpi.h
-include/petsc/mpiuni/mpif.h
-include/petsc/mpiuni/mpiunifdef.h
-include/petsc/private/bagimpl.h
-include/petsc/private/characteristicimpl.h
-include/petsc/private/dmdaimpl.h
-include/petsc/private/dmforestimpl.h
-include/petsc/private/dmimpl.h
-include/petsc/private/dmlabelimpl.h
-include/petsc/private/dmmbimpl.h
-include/petsc/private/dmnetworkimpl.h
-include/petsc/private/dmpatchimpl.h
-include/petsc/private/dmpleximpl.h
-include/petsc/private/dmswarmimpl.h
-include/petsc/private/drawimpl.h
-include/petsc/private/dtimpl.h
-include/petsc/private/f90impl.h
-include/petsc/private/fortranimpl.h
-include/petsc/private/glvisvecimpl.h
-include/petsc/private/glvisviewerimpl.h
-include/petsc/private/hash.h
-include/petsc/private/isimpl.h
-include/petsc/private/kernels/blockinvert.h
-include/petsc/private/kernels/blockmatmult.h
-include/petsc/private/kernels/blocktranspose.h
-include/petsc/private/kernels/petscaxpy.h
-include/petsc/private/kspimpl.h
-include/petsc/private/linesearchimpl.h
-include/petsc/private/logimpl.h
-include/petsc/private/matimpl.h
-include/petsc/private/matorderimpl.h
-include/petsc/private/pcgamgimpl.h
-include/petsc/private/pcimpl.h
-include/petsc/private/pcmgimpl.h
-include/petsc/private/petscconvestimpl.h
-include/petsc/private/petscdsimpl.h
-include/petsc/private/petscfeimpl.h
-include/petsc/private/petscfptimpl.h
-include/petsc/private/petscfvimpl.h
-include/petsc/private/petscimpl.h
-include/petsc/private/sfimpl.h
-include/petsc/private/snesimpl.h
-include/petsc/private/taoimpl.h
-include/petsc/private/taolinesearchimpl.h
-include/petsc/private/tsimpl.h
-include/petsc/private/vecimpl.h
-include/petsc/private/viewerimpl.h
-include/petscao.h
-include/petscbag.h
-include/petscblaslapack.h
-include/petscblaslapack_mangle.h
-include/petscblaslapack_stdcall.h
-include/petscbt.h
-include/petsccharacteristic.h
-include/petscconf.h
-include/petscconfiginfo.h
-include/petscconvest.h
-include/petscctable.h
-include/petsccuda.h
-include/petsccusp.h
-include/petscdm.h
-include/petscdmcomposite.h
-include/petscdmda.h
-include/petscdmdatypes.h
-include/petscdmforest.h
-include/petscdmlabel.h
-include/petscdmmoab.h
-include/petscdmnetwork.h
-include/petscdmpatch.h
-include/petscdmplex.h
-include/petscdmredundant.h
-include/petscdmshell.h
-include/petscdmsliced.h
-include/petscdmswarm.h
-include/petscdmtypes.h
-include/petscdraw.h
-include/petscdrawtypes.h
-include/petscds.h
-include/petscdstypes.h
-include/petscdt.h
-include/petscerror.h
-include/petscfe.h
-include/petscfetypes.h
-include/petscfix.h
-include/petscfv.h
-include/petscfvtypes.h
-include/petscgll.h
-include/petscis.h
-include/petscistypes.h
-include/petscksp.h
-include/petsclog.h
-include/petscmachineinfo.h
-include/petscmat.h
-include/petscmatcoarsen.h
-include/petscmatelemental.h
-include/petscmath.h
-include/petscmathypre.h
-include/petscmatlab.h
-include/petscoptions.h
-include/petscpc.h
-include/petscpctypes.h
-include/petscpf.h
-include/petscsf.h
-include/petscsftypes.h
-include/petscsnes.h
-include/petscsys.h
-include/petsctao.h
-include/petsctaolinesearch.h
-include/petsctime.h
-include/petscts.h
-include/petscvalgrind.h
-include/petscvec.h
-include/petscversion.h
-include/petscviennacl.h
-include/petscviewer.h
-include/petscviewerhdf5.h
-include/petscviewersaws.h
-include/petscviewertypes.h
-include/petscwebclient.h
-lib/libpetsc.so
-lib/libpetsc.so.%%SHL%%
-lib/libpetsc.so.%%SHLIB%%
-libdata/pkgconfig/PETSc.pc
-%%DATADIR%%/datafiles/matrices/amesos2_test_mat0.mtx
-%%DATADIR%%/datafiles/matrices/hpd-complex-int32-float32
-%%DATADIR%%/datafiles/matrices/hpd-complex-int32-float64
-%%DATADIR%%/datafiles/matrices/hpd-complex-int64-float32
-%%DATADIR%%/datafiles/matrices/hpd-complex-int64-float64
-%%DATADIR%%/datafiles/matrices/nh-complex-int32-float32
-%%DATADIR%%/datafiles/matrices/nh-complex-int32-float64
-%%DATADIR%%/datafiles/matrices/nh-complex-int64-float32
-%%DATADIR%%/datafiles/matrices/nh-complex-int64-float64
-%%DATADIR%%/datafiles/matrices/ns-real-int32-float32
-%%DATADIR%%/datafiles/matrices/ns-real-int32-float64
-%%DATADIR%%/datafiles/matrices/ns-real-int64-float32
-%%DATADIR%%/datafiles/matrices/ns-real-int64-float64
-%%DATADIR%%/datafiles/matrices/spd-real-int32-float128
-%%DATADIR%%/datafiles/matrices/spd-real-int32-float32
-%%DATADIR%%/datafiles/matrices/spd-real-int32-float64
-%%DATADIR%%/datafiles/matrices/spd-real-int64-float32
-%%DATADIR%%/datafiles/matrices/spd-real-int64-float64
-%%DATADIR%%/datafiles/meshes/2Dgrd.exo
-%%DATADIR%%/datafiles/meshes/Rect-tri3.exo
-%%DATADIR%%/datafiles/meshes/annulus-20.exo
-%%DATADIR%%/datafiles/meshes/blockcylinder-50.exo
-%%DATADIR%%/datafiles/meshes/cow.msh
-%%DATADIR%%/datafiles/meshes/cube_5tets.cas
-%%DATADIR%%/datafiles/meshes/cube_5tets_ascii.cas
-%%DATADIR%%/datafiles/meshes/cylinder.med
-%%DATADIR%%/datafiles/meshes/doublet-tet.msh
-%%DATADIR%%/datafiles/meshes/grid_c.cgns
-%%DATADIR%%/datafiles/meshes/horse.ply.bz2
-%%DATADIR%%/datafiles/meshes/sevenside-quad-15.exo
-%%DATADIR%%/datafiles/meshes/sevenside-quad.exo
-%%DATADIR%%/datafiles/meshes/sevenside.exo
-%%DATADIR%%/datafiles/meshes/simpleblock-100.exo
-%%DATADIR%%/datafiles/meshes/square.cas
-%%DATADIR%%/datafiles/meshes/square.med
-%%DATADIR%%/datafiles/meshes/square.msh
-%%DATADIR%%/datafiles/meshes/square_bin.msh
-%%DATADIR%%/datafiles/meshes/square_bin_physnames.msh
-%%DATADIR%%/datafiles/meshes/square_quad.msh
-%%DATADIR%%/datafiles/meshes/squaremotor-30.exo
-%%DATADIR%%/datafiles/meshes/texas.msh
-%%DATADIR%%/datafiles/meshes/tut21.cgns
-%%DATADIR%%/matlab/@PetscOpenFile/PetscOpenFile.m
-%%DATADIR%%/matlab/@PetscOpenFile/close.m
-%%DATADIR%%/matlab/@PetscOpenFile/read.m
-%%DATADIR%%/matlab/@PetscOpenFile/write.m
-%%DATADIR%%/matlab/@PetscOpenSocket/PetscOpenSocket.m
-%%DATADIR%%/matlab/@PetscOpenSocket/close.m
-%%DATADIR%%/matlab/@PetscOpenSocket/read.m
-%%DATADIR%%/matlab/@PetscOpenSocket/write.m
-%%DATADIR%%/matlab/PetscBagRead.m
-%%DATADIR%%/matlab/PetscBinaryRead.m
-%%DATADIR%%/matlab/PetscBinaryWrite.m
-%%DATADIR%%/matlab/PetscReadBinaryMatlab.m
-%%DATADIR%%/matlab/PetscReadBinaryTrajectory.m
-%%DATADIR%%/matlab/UFgetPetscMat.m
-%%DATADIR%%/matlab/generatePetscTestFiles.m
-%%DATADIR%%/matlab/generatehtml.m
-%%DATADIR%%/matlab/laplacian.m
-%%DATADIR%%/matlab/laplacianlicense.txt
-%%DATADIR%%/matlab/launch.m
-%%DATADIR%%/saws/documentation
-%%DATADIR%%/saws/images/arrow.png
-%%DATADIR%%/saws/images/transition.bmp
-%%DATADIR%%/saws/js/PETSc.js
-%%DATADIR%%/saws/js/boxTree.js
-%%DATADIR%%/saws/js/defaults.js
-%%DATADIR%%/saws/js/drawDiagrams.js
-%%DATADIR%%/saws/js/events.js
-%%DATADIR%%/saws/js/getCmdOptions.js
-%%DATADIR%%/saws/js/listLogic.js
-%%DATADIR%%/saws/js/main.js
-%%DATADIR%%/saws/js/matrixTex.js
-%%DATADIR%%/saws/js/parsePrefix.js
-%%DATADIR%%/saws/js/populateLists.js
-%%DATADIR%%/saws/js/recordSawsData.js
-%%DATADIR%%/saws/js/tree.js
-%%DATADIR%%/saws/js/treeInterface.js
-%%DATADIR%%/saws/js/utils.js
-%%DATADIR%%/saws/readme
-%%DATADIR%%/xml/performance_xml2html.xsl