Update to 2.45.

PR:		209300
Submitted by:	tkato432 yahoo com
Sponsored by:	Absolight

3 files changed, 75 insertions, 9 deletions

diff --git a/science/gwyddion/Makefile b/science/gwyddion/Makefile
index 89b480229f71..031661a979ec 100644
--- a/science/gwyddion/Makefile
+++ b/science/gwyddion/Makefile
@@ -2,7 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	gwyddion
-PORTVERSION=	2.44
+PORTVERSION=	2.45
 CATEGORIES=	science graphics
 MASTER_SITES=	SF
 
diff --git a/science/gwyddion/distinfo b/science/gwyddion/distinfo
index 0069a36acfda..ad8c9ec66713 100644
--- a/science/gwyddion/distinfo
+++ b/science/gwyddion/distinfo
@@ -1,2 +1,2 @@
-SHA256 (gwyddion-2.44.tar.xz) = e7ee7545770a276e78fdff1b51e547d5d0ba39b94995da91e0d6797122b7eda5
-SIZE (gwyddion-2.44.tar.xz) = 3517624
+SHA256 (gwyddion-2.45.tar.xz) = 7958943825bac5a38be4bb13bcde04562a44515b5a5f4c3beaf6b6227c4691b5
+SIZE (gwyddion-2.45.tar.xz) = 3853940
diff --git a/science/gwyddion/pkg-plist b/science/gwyddion/pkg-plist
index 27ebeaccbe3c..abe025ec8c7c 100644
--- a/science/gwyddion/pkg-plist
+++ b/science/gwyddion/pkg-plist
@@ -16,6 +16,7 @@ include/gwyddion/app/gwyplaintool.h
 include/gwyddion/app/gwytool.h
 include/gwyddion/app/help.h
 include/gwyddion/app/log.h
+include/gwyddion/app/logging.h
 include/gwyddion/app/menu.h
 include/gwyddion/app/meta.h
 include/gwyddion/app/resource-editor.h
@@ -110,6 +111,7 @@ include/gwyddion/libgwymodule/gwymodule-layer.h
 include/gwyddion/libgwymodule/gwymodule-process.h
 include/gwyddion/libgwymodule/gwymodule-tool.h
 include/gwyddion/libgwymodule/gwymodule-volume.h
+include/gwyddion/libgwymodule/gwymodule-xyz.h
 include/gwyddion/libgwymodule/gwymodule.h
 include/gwyddion/libgwymodule/gwymodulebrowser.h
 include/gwyddion/libgwymodule/gwymoduleenums.h
@@ -141,8 +143,10 @@ include/gwyddion/libprocess/level.h
 include/gwyddion/libprocess/linestats.h
 include/gwyddion/libprocess/simplefft.h
 include/gwyddion/libprocess/spectra.h
+include/gwyddion/libprocess/spline.h
 include/gwyddion/libprocess/stats.h
 include/gwyddion/libprocess/stats_uncertainty.h
+include/gwyddion/libprocess/surface.h
 include/gwyddion/libprocess/tip.h
 include/gwyddion/libprocess/triangulation.h
 lib/gwyddion/include/gwyconfig.h
@@ -181,6 +185,7 @@ lib/gwyddion/modules/file/hitachi-afm.so
 lib/gwyddion/modules/file/hitachi-sem.so
 lib/gwyddion/modules/file/igorfile.so
 lib/gwyddion/modules/file/imgexport.so
+lib/gwyddion/modules/file/intelliwave.so
 lib/gwyddion/modules/file/intematix.so
 lib/gwyddion/modules/file/iso28600.so
 lib/gwyddion/modules/file/jeol.so
@@ -275,10 +280,12 @@ lib/gwyddion/modules/graph/graph_fdfit.so
 lib/gwyddion/modules/graph/graph_filter.so
 lib/gwyddion/modules/graph/graph_fit.so
 lib/gwyddion/modules/graph/graph_level.so
+lib/gwyddion/modules/graph/graph_peaks.so
 lib/gwyddion/modules/layer/axis.so
 lib/gwyddion/modules/layer/ellipse.so
 lib/gwyddion/modules/layer/lattice.so
 lib/gwyddion/modules/layer/line.so
+lib/gwyddion/modules/layer/path.so
 lib/gwyddion/modules/layer/point.so
 lib/gwyddion/modules/layer/rectangle.so
 lib/gwyddion/modules/plugin-proxy.so
@@ -293,6 +300,7 @@ lib/gwyddion/modules/process/calcoefs_new.so
 lib/gwyddion/modules/process/calcoefs_simple.so
 lib/gwyddion/modules/process/calcoefs_view.so
 lib/gwyddion/modules/process/calibrate.so
+lib/gwyddion/modules/process/coerce.so
 lib/gwyddion/modules/process/col_synth.so
 lib/gwyddion/modules/process/convolution_filter.so
 lib/gwyddion/modules/process/correct_affine.so
@@ -308,6 +316,7 @@ lib/gwyddion/modules/process/dwtanisotropy.so
 lib/gwyddion/modules/process/edge.so
 lib/gwyddion/modules/process/entropy.so
 lib/gwyddion/modules/process/extend.so
+lib/gwyddion/modules/process/extract_path.so
 lib/gwyddion/modules/process/facet-level.so
 lib/gwyddion/modules/process/facet_analysis.so
 lib/gwyddion/modules/process/fbm_synth.so
@@ -370,6 +379,7 @@ lib/gwyddion/modules/process/semsim.so
 lib/gwyddion/modules/process/shade.so
 lib/gwyddion/modules/process/slope_dist.so
 lib/gwyddion/modules/process/sphere-revolve.so
+lib/gwyddion/modules/process/straighten_path.so
 lib/gwyddion/modules/process/threshold.so
 lib/gwyddion/modules/process/tilt.so
 lib/gwyddion/modules/process/tip_blind.so
@@ -381,6 +391,7 @@ lib/gwyddion/modules/process/volumize_layers.so
 lib/gwyddion/modules/process/wave_synth.so
 lib/gwyddion/modules/process/wpour_mark.so
 lib/gwyddion/modules/process/xydenoise.so
+lib/gwyddion/modules/process/xyzize.so
 %%PYTHON%%lib/gwyddion/modules/pygwy.so
 lib/gwyddion/modules/tool/crop.so
 lib/gwyddion/modules/tool/distance.so
@@ -409,6 +420,8 @@ lib/gwyddion/modules/volume/volume_kmedians.so
 lib/gwyddion/modules/volume/volume_linestat.so
 lib/gwyddion/modules/volume/volume_slice.so
 %%PYTHON%%lib/gwyddion/modules/volume/volume_zcal.so
+lib/gwyddion/modules/xyz/xyz_drift.so
+lib/gwyddion/modules/xyz/xyz_raster.so
 %%PERL%%lib/gwyddion/perl/Gwyddion/dump.pm
 %%PYTHON%%lib/gwyddion/python/Gwyddion/__init__.py
 %%PYTHON%%lib/gwyddion/python/Gwyddion/__init__.pyc
@@ -419,22 +432,22 @@ lib/gwyddion/modules/volume/volume_slice.so
 %%RUBY%%lib/gwyddion/ruby/gwyddion/dump.rb
 lib/libgwyapp2.so
 lib/libgwyapp2.so.0
-lib/libgwyapp2.so.0.14.1
+lib/libgwyapp2.so.0.15.0
 lib/libgwyddion2.so
 lib/libgwyddion2.so.0
-lib/libgwyddion2.so.0.19.0
+lib/libgwyddion2.so.0.20.0
 lib/libgwydgets2.so
 lib/libgwydgets2.so.0
-lib/libgwydgets2.so.0.21.0
+lib/libgwydgets2.so.0.22.0
 lib/libgwydraw2.so
 lib/libgwydraw2.so.0
-lib/libgwydraw2.so.0.4.0
+lib/libgwydraw2.so.0.4.1
 lib/libgwymodule2.so
 lib/libgwymodule2.so.0
-lib/libgwymodule2.so.0.8.1
+lib/libgwymodule2.so.0.9.0
 lib/libgwyprocess2.so
 lib/libgwyprocess2.so.0
-lib/libgwyprocess2.so.0.27.0
+lib/libgwyprocess2.so.0.28.0
 %%PYTHON%%%%PYTHON_SITELIBDIR%%/gwy.so
 libdata/pkgconfig/gwyddion.pc
 libexec/gwyddion/plugins/file/dump
@@ -553,19 +566,26 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_color_range_auto-24.png
 %%DATADIR%%/pixmaps/gwy_color_range_fixed-24.png
 %%DATADIR%%/pixmaps/gwy_color_range_full-24.png
+%%DATADIR%%/pixmaps/gwy_convolution-24.png
 %%DATADIR%%/pixmaps/gwy_correct_affine-24.png
 %%DATADIR%%/pixmaps/gwy_crop-24.png
 %%DATADIR%%/pixmaps/gwy_cwt-24.png
 %%DATADIR%%/pixmaps/gwy_data_measure-24.png
 %%DATADIR%%/pixmaps/gwy_distance-24.png
+%%DATADIR%%/pixmaps/gwy_distribution_angle-24.png
+%%DATADIR%%/pixmaps/gwy_distribution_slope-24.png
 %%DATADIR%%/pixmaps/gwy_drift-24.png
 %%DATADIR%%/pixmaps/gwy_dwt-24.png
 %%DATADIR%%/pixmaps/gwy_edge-24.png
+%%DATADIR%%/pixmaps/gwy_entropy-24.png
 %%DATADIR%%/pixmaps/gwy_extend-24.png
 %%DATADIR%%/pixmaps/gwy_facet_level-24.png
 %%DATADIR%%/pixmaps/gwy_favourite-24.png
 %%DATADIR%%/pixmaps/gwy_fft-24.png
+%%DATADIR%%/pixmaps/gwy_fft_2d-24.png
+%%DATADIR%%/pixmaps/gwy_fft_filter_2d-24.png
 %%DATADIR%%/pixmaps/gwy_filter-24.png
+%%DATADIR%%/pixmaps/gwy_find_peaks-24.png
 %%DATADIR%%/pixmaps/gwy_fix_zero-24.png
 %%DATADIR%%/pixmaps/gwy_flip_horizontally-24.png
 %%DATADIR%%/pixmaps/gwy_flip_vertically-24.png
@@ -573,14 +593,27 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_gl_material-16.png
 %%DATADIR%%/pixmaps/gwy_gradient_horizontal-24.png
 %%DATADIR%%/pixmaps/gwy_gradient_vertical-24.png
+%%DATADIR%%/pixmaps/gwy_grain_correlation-24.png
+%%DATADIR%%/pixmaps/gwy_grain_exscribed_circle-24.png
+%%DATADIR%%/pixmaps/gwy_grain_inscribed_circle-24.png
 %%DATADIR%%/pixmaps/gwy_grains-24.png
+%%DATADIR%%/pixmaps/gwy_grains_edge-24.png
 %%DATADIR%%/pixmaps/gwy_grains_graph-24.png
 %%DATADIR%%/pixmaps/gwy_grains_measure-24.png
 %%DATADIR%%/pixmaps/gwy_grains_remove-24.png
 %%DATADIR%%/pixmaps/gwy_grains_water-24.png
 %%DATADIR%%/pixmaps/gwy_graph-24.png
+%%DATADIR%%/pixmaps/gwy_graph_align-24.png
+%%DATADIR%%/pixmaps/gwy_graph_cut-24.png
+%%DATADIR%%/pixmaps/gwy_graph_dos-24.png
+%%DATADIR%%/pixmaps/gwy_graph_export_ascii-24.png
+%%DATADIR%%/pixmaps/gwy_graph_export_png-24.png
+%%DATADIR%%/pixmaps/gwy_graph_export_vector-24.png
+%%DATADIR%%/pixmaps/gwy_graph_fd-24.png
+%%DATADIR%%/pixmaps/gwy_graph_filter-24.png
 %%DATADIR%%/pixmaps/gwy_graph_function-24.png
 %%DATADIR%%/pixmaps/gwy_graph_halfgauss-24.png
+%%DATADIR%%/pixmaps/gwy_graph_level-24.png
 %%DATADIR%%/pixmaps/gwy_graph_measure-24.png
 %%DATADIR%%/pixmaps/gwy_graph_palette-24.png
 %%DATADIR%%/pixmaps/gwy_graph_pointer-24.png
@@ -591,14 +624,21 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_graph_zoom_out-24.png
 %%DATADIR%%/pixmaps/gwy_gwyddion-32.png
 %%DATADIR%%/pixmaps/gwy_gwyddion-60.png
+%%DATADIR%%/pixmaps/gwy_hough-24.png
 %%DATADIR%%/pixmaps/gwy_immerse-24.png
 %%DATADIR%%/pixmaps/gwy_iso_roughness-24.png
 %%DATADIR%%/pixmaps/gwy_italic-20.png
 %%DATADIR%%/pixmaps/gwy_less-24.png
 %%DATADIR%%/pixmaps/gwy_level-24.png
+%%DATADIR%%/pixmaps/gwy_level_flatten_base-24.png
+%%DATADIR%%/pixmaps/gwy_level_median-24.png
 %%DATADIR%%/pixmaps/gwy_level_triangle-24.png
 %%DATADIR%%/pixmaps/gwy_light_rotate-24.png
 %%DATADIR%%/pixmaps/gwy_line_level-24.png
+%%DATADIR%%/pixmaps/gwy_load_debug-20.png
+%%DATADIR%%/pixmaps/gwy_load_info-20.png
+%%DATADIR%%/pixmaps/gwy_load_warning-20.png
+%%DATADIR%%/pixmaps/gwy_local_slope-24.png
 %%DATADIR%%/pixmaps/gwy_logscale_horizontal-24.png
 %%DATADIR%%/pixmaps/gwy_logscale_vertical-24.png
 %%DATADIR%%/pixmaps/gwy_mark_with-24.png
@@ -608,15 +648,18 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_mask_circle-24.png
 %%DATADIR%%/pixmaps/gwy_mask_circle_exclusive-24.png
 %%DATADIR%%/pixmaps/gwy_mask_circle_inclusive-24.png
+%%DATADIR%%/pixmaps/gwy_mask_distribute-24.png
 %%DATADIR%%/pixmaps/gwy_mask_editor-24.png
 %%DATADIR%%/pixmaps/gwy_mask_exclude-24.png
 %%DATADIR%%/pixmaps/gwy_mask_exclude_circle-24.png
+%%DATADIR%%/pixmaps/gwy_mask_extract-24.png
 %%DATADIR%%/pixmaps/gwy_mask_fill_draw-24.png
 %%DATADIR%%/pixmaps/gwy_mask_fill_erase-24.png
 %%DATADIR%%/pixmaps/gwy_mask_grow-24.png
 %%DATADIR%%/pixmaps/gwy_mask_intersect-24.png
 %%DATADIR%%/pixmaps/gwy_mask_invert-24.png
 %%DATADIR%%/pixmaps/gwy_mask_line-24.png
+%%DATADIR%%/pixmaps/gwy_mask_morph-24.png
 %%DATADIR%%/pixmaps/gwy_mask_paint_draw-24.png
 %%DATADIR%%/pixmaps/gwy_mask_paint_erase-24.png
 %%DATADIR%%/pixmaps/gwy_mask_rect_exclusive-24.png
@@ -624,8 +667,12 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_mask_remove-24.png
 %%DATADIR%%/pixmaps/gwy_mask_shrink-24.png
 %%DATADIR%%/pixmaps/gwy_mask_subtract-24.png
+%%DATADIR%%/pixmaps/gwy_mask_thin-24.png
+%%DATADIR%%/pixmaps/gwy_measure_lattice-24.png
 %%DATADIR%%/pixmaps/gwy_merge-24.png
 %%DATADIR%%/pixmaps/gwy_more-24.png
+%%DATADIR%%/pixmaps/gwy_neural_apply-24.png
+%%DATADIR%%/pixmaps/gwy_neural_train-24.png
 %%DATADIR%%/pixmaps/gwy_palettes-16.png
 %%DATADIR%%/pixmaps/gwy_palettes-24.png
 %%DATADIR%%/pixmaps/gwy_path_level-24.png
@@ -633,6 +680,8 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_polynom-24.png
 %%DATADIR%%/pixmaps/gwy_polynom_level-24.png
 %%DATADIR%%/pixmaps/gwy_profile-24.png
+%%DATADIR%%/pixmaps/gwy_psdf_log_phi-24.png
+%%DATADIR%%/pixmaps/gwy_psdf_section-24.png
 %%DATADIR%%/pixmaps/gwy_pygwy-24.png
 %%DATADIR%%/pixmaps/gwy_remove_under_mask-24.png
 %%DATADIR%%/pixmaps/gwy_rotate-24.png
@@ -650,6 +699,8 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_stat_quantities-24.png
 %%DATADIR%%/pixmaps/gwy_subscript-20.png
 %%DATADIR%%/pixmaps/gwy_superscript-20.png
+%%DATADIR%%/pixmaps/gwy_synthetic_ballistic_deposition-24.png
+%%DATADIR%%/pixmaps/gwy_synthetic_brownian_motion-24.png
 %%DATADIR%%/pixmaps/gwy_synthetic_columnar-24.png
 %%DATADIR%%/pixmaps/gwy_synthetic_diffusion-24.png
 %%DATADIR%%/pixmaps/gwy_synthetic_domains-24.png
@@ -659,9 +710,23 @@ share/applications/gwyddion.desktop
 %%DATADIR%%/pixmaps/gwy_synthetic_objects-24.png
 %%DATADIR%%/pixmaps/gwy_synthetic_particles-24.png
 %%DATADIR%%/pixmaps/gwy_synthetic_pattern-24.png
+%%DATADIR%%/pixmaps/gwy_synthetic_spectral-24.png
 %%DATADIR%%/pixmaps/gwy_synthetic_waves-24.png
+%%DATADIR%%/pixmaps/gwy_tilt-24.png
+%%DATADIR%%/pixmaps/gwy_tip_dilation-24.png
+%%DATADIR%%/pixmaps/gwy_tip_erosion-24.png
+%%DATADIR%%/pixmaps/gwy_tip_estimation-24.png
+%%DATADIR%%/pixmaps/gwy_tip_map-24.png
+%%DATADIR%%/pixmaps/gwy_tip_model-24.png
+%%DATADIR%%/pixmaps/gwy_tip_pid-24.png
 %%DATADIR%%/pixmaps/gwy_unrotate-24.png
 %%DATADIR%%/pixmaps/gwy_value_invert-24.png
+%%DATADIR%%/pixmaps/gwy_volume-24.png
+%%DATADIR%%/pixmaps/gwy_volume_calibrate-24.png
+%%DATADIR%%/pixmaps/gwy_volume_dimensions-24.png
+%%DATADIR%%/pixmaps/gwy_volume_invert-24.png
+%%DATADIR%%/pixmaps/gwy_volumize_layers-24.png
+%%DATADIR%%/pixmaps/gwy_zero_mean-24.png
 %%DATADIR%%/pixmaps/gwy_zoom_1_1-24.png
 %%DATADIR%%/pixmaps/gwy_zoom_fit-24.png
 %%DATADIR%%/pixmaps/gwy_zoom_in-24.png
@@ -674,6 +739,7 @@ share/applications/gwyddion.desktop
 share/icons/hicolor/48x48/apps/gwyddion.png
 share/locale/cs/LC_MESSAGES/gwyddion.mo
 share/locale/de/LC_MESSAGES/gwyddion.mo
+share/locale/en_GB/LC_MESSAGES/gwyddion.mo
 share/locale/es/LC_MESSAGES/gwyddion.mo
 share/locale/fr/LC_MESSAGES/gwyddion.mo
 share/locale/it/LC_MESSAGES/gwyddion.mo