Cleanup plists

1 files changed, 62 insertions, 62 deletions

diff --git a/science/coot/pkg-plist b/science/coot/pkg-plist
index 112d61dc27bb..d1ba63f5d598 100644
--- a/science/coot/pkg-plist
+++ b/science/coot/pkg-plist
@@ -256,148 +256,148 @@ lib/libcootilus.so.0
 lib/libcootilus.so.0.0.0
 %%PYTHON_SITELIBDIR%%/coot/3d_generator_import.py
 %%PYTHON_SITELIBDIR%%/coot/3d_generator_import.pyc
-%%PYTHON_SITELIBDIR%%/coot/3d_generator_import.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/3d_generator_import.pyo
 %%PYTHON_SITELIBDIR%%/coot/acedrg_link.py
 %%PYTHON_SITELIBDIR%%/coot/acedrg_link.pyc
-%%PYTHON_SITELIBDIR%%/coot/acedrg_link.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/acedrg_link.pyo
 %%PYTHON_SITELIBDIR%%/coot/americanisms.py
 %%PYTHON_SITELIBDIR%%/coot/americanisms.pyc
-%%PYTHON_SITELIBDIR%%/coot/americanisms.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/americanisms.pyo
 %%PYTHON_SITELIBDIR%%/coot/background_demo.py
 %%PYTHON_SITELIBDIR%%/coot/background_demo.pyc
-%%PYTHON_SITELIBDIR%%/coot/background_demo.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/background_demo.pyo
 %%PYTHON_SITELIBDIR%%/coot/bones_reader.py
 %%PYTHON_SITELIBDIR%%/coot/bones_reader.pyc
-%%PYTHON_SITELIBDIR%%/coot/bones_reader.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/bones_reader.pyo
 %%PYTHON_SITELIBDIR%%/coot/brute_lsqman.py
 %%PYTHON_SITELIBDIR%%/coot/brute_lsqman.pyc
-%%PYTHON_SITELIBDIR%%/coot/brute_lsqman.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/brute_lsqman.pyo
 %%PYTHON_SITELIBDIR%%/coot/check_for_updates.py
 %%PYTHON_SITELIBDIR%%/coot/check_for_updates.pyc
-%%PYTHON_SITELIBDIR%%/coot/check_for_updates.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/check_for_updates.pyo
 %%PYTHON_SITELIBDIR%%/coot/chemical_feature_clusters.py
 %%PYTHON_SITELIBDIR%%/coot/chemical_feature_clusters.pyc
-%%PYTHON_SITELIBDIR%%/coot/chemical_feature_clusters.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/chemical_feature_clusters.pyo
 %%PYTHON_SITELIBDIR%%/coot/cho_restraints_from_models.py
 %%PYTHON_SITELIBDIR%%/coot/cho_restraints_from_models.pyc
-%%PYTHON_SITELIBDIR%%/coot/cho_restraints_from_models.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/cho_restraints_from_models.pyo
 %%PYTHON_SITELIBDIR%%/coot/clear_backup.py
 %%PYTHON_SITELIBDIR%%/coot/clear_backup.pyc
-%%PYTHON_SITELIBDIR%%/coot/clear_backup.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/clear_backup.pyo
 %%PYTHON_SITELIBDIR%%/coot/cns2coot.py
 %%PYTHON_SITELIBDIR%%/coot/cns2coot.pyc
-%%PYTHON_SITELIBDIR%%/coot/cns2coot.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/cns2coot.pyo
 %%PYTHON_SITELIBDIR%%/coot/contact_score_isolated_ligand.py
 %%PYTHON_SITELIBDIR%%/coot/contact_score_isolated_ligand.pyc
-%%PYTHON_SITELIBDIR%%/coot/contact_score_isolated_ligand.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/contact_score_isolated_ligand.pyo
 %%PYTHON_SITELIBDIR%%/coot/coot_gui.py
 %%PYTHON_SITELIBDIR%%/coot/coot_gui.pyc
-%%PYTHON_SITELIBDIR%%/coot/coot_gui.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/coot_gui.pyo
 %%PYTHON_SITELIBDIR%%/coot/coot_load_modules.py
 %%PYTHON_SITELIBDIR%%/coot/coot_load_modules.pyc
-%%PYTHON_SITELIBDIR%%/coot/coot_load_modules.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/coot_load_modules.pyo
 %%PYTHON_SITELIBDIR%%/coot/coot_lsq.py
 %%PYTHON_SITELIBDIR%%/coot/coot_lsq.pyc
-%%PYTHON_SITELIBDIR%%/coot/coot_lsq.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/coot_lsq.pyo
 %%PYTHON_SITELIBDIR%%/coot/coot_toolbuttons.py
 %%PYTHON_SITELIBDIR%%/coot/coot_toolbuttons.pyc
-%%PYTHON_SITELIBDIR%%/coot/coot_toolbuttons.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/coot_toolbuttons.pyo
 %%PYTHON_SITELIBDIR%%/coot/coot_utils.py
 %%PYTHON_SITELIBDIR%%/coot/coot_utils.pyc
-%%PYTHON_SITELIBDIR%%/coot/coot_utils.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/coot_utils.pyo
 %%PYTHON_SITELIBDIR%%/coot/create_server.py
 %%PYTHON_SITELIBDIR%%/coot/create_server.pyc
-%%PYTHON_SITELIBDIR%%/coot/create_server.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/create_server.pyo
 %%PYTHON_SITELIBDIR%%/coot/dictionary_generators.py
 %%PYTHON_SITELIBDIR%%/coot/dictionary_generators.pyc
-%%PYTHON_SITELIBDIR%%/coot/dictionary_generators.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/dictionary_generators.pyo
 %%PYTHON_SITELIBDIR%%/coot/enhanced_ligand.py
 %%PYTHON_SITELIBDIR%%/coot/enhanced_ligand.pyc
-%%PYTHON_SITELIBDIR%%/coot/enhanced_ligand.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/enhanced_ligand.pyo
 %%PYTHON_SITELIBDIR%%/coot/extensions.py
 %%PYTHON_SITELIBDIR%%/coot/extensions.pyc
-%%PYTHON_SITELIBDIR%%/coot/extensions.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/extensions.pyo
 %%PYTHON_SITELIBDIR%%/coot/filter.py
 %%PYTHON_SITELIBDIR%%/coot/filter.pyc
-%%PYTHON_SITELIBDIR%%/coot/filter.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/filter.pyo
 %%PYTHON_SITELIBDIR%%/coot/fitting.py
 %%PYTHON_SITELIBDIR%%/coot/fitting.pyc
-%%PYTHON_SITELIBDIR%%/coot/fitting.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/fitting.pyo
 %%PYTHON_SITELIBDIR%%/coot/gap.py
 %%PYTHON_SITELIBDIR%%/coot/gap.pyc
-%%PYTHON_SITELIBDIR%%/coot/gap.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/gap.pyo
 %%PYTHON_SITELIBDIR%%/coot/generic_objects.py
 %%PYTHON_SITELIBDIR%%/coot/generic_objects.pyc
-%%PYTHON_SITELIBDIR%%/coot/generic_objects.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/generic_objects.pyo
 %%PYTHON_SITELIBDIR%%/coot/get_ebi.py
 %%PYTHON_SITELIBDIR%%/coot/get_ebi.pyc
-%%PYTHON_SITELIBDIR%%/coot/get_ebi.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/get_ebi.pyo
 %%PYTHON_SITELIBDIR%%/coot/get_recent_pdbe.py
 %%PYTHON_SITELIBDIR%%/coot/get_recent_pdbe.pyc
-%%PYTHON_SITELIBDIR%%/coot/get_recent_pdbe.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/get_recent_pdbe.pyo
 %%PYTHON_SITELIBDIR%%/coot/group_settings.py
 %%PYTHON_SITELIBDIR%%/coot/group_settings.pyc
-%%PYTHON_SITELIBDIR%%/coot/group_settings.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/group_settings.pyo
 %%PYTHON_SITELIBDIR%%/coot/gui_add_linked_cho.py
 %%PYTHON_SITELIBDIR%%/coot/gui_add_linked_cho.pyc
-%%PYTHON_SITELIBDIR%%/coot/gui_add_linked_cho.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/gui_add_linked_cho.pyo
 %%PYTHON_SITELIBDIR%%/coot/gui_contact_score_isolated_ligand.py
 %%PYTHON_SITELIBDIR%%/coot/gui_contact_score_isolated_ligand.pyc
-%%PYTHON_SITELIBDIR%%/coot/gui_contact_score_isolated_ligand.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/gui_contact_score_isolated_ligand.pyo
 %%PYTHON_SITELIBDIR%%/coot/gui_hole.py
 %%PYTHON_SITELIBDIR%%/coot/gui_hole.pyc
-%%PYTHON_SITELIBDIR%%/coot/gui_hole.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/gui_hole.pyo
 %%PYTHON_SITELIBDIR%%/coot/gui_ligand_sliders.py
 %%PYTHON_SITELIBDIR%%/coot/gui_ligand_sliders.pyc
-%%PYTHON_SITELIBDIR%%/coot/gui_ligand_sliders.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/gui_ligand_sliders.pyo
 %%PYTHON_SITELIBDIR%%/coot/gui_prosmart.py
 %%PYTHON_SITELIBDIR%%/coot/gui_prosmart.pyc
-%%PYTHON_SITELIBDIR%%/coot/gui_prosmart.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/gui_prosmart.pyo
 %%PYTHON_SITELIBDIR%%/coot/hello.py
 %%PYTHON_SITELIBDIR%%/coot/hello.pyc
-%%PYTHON_SITELIBDIR%%/coot/hello.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/hello.pyo
 %%PYTHON_SITELIBDIR%%/coot/interactive_nudge_residues.py
 %%PYTHON_SITELIBDIR%%/coot/interactive_nudge_residues.pyc
-%%PYTHON_SITELIBDIR%%/coot/interactive_nudge_residues.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/interactive_nudge_residues.pyo
 %%PYTHON_SITELIBDIR%%/coot/jligand.py
 %%PYTHON_SITELIBDIR%%/coot/jligand.pyc
-%%PYTHON_SITELIBDIR%%/coot/jligand.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/jligand.pyo
 %%PYTHON_SITELIBDIR%%/coot/jligand_gui.py
 %%PYTHON_SITELIBDIR%%/coot/jligand_gui.pyc
-%%PYTHON_SITELIBDIR%%/coot/jligand_gui.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/jligand_gui.pyo
 %%PYTHON_SITELIBDIR%%/coot/libcheck.py
 %%PYTHON_SITELIBDIR%%/coot/libcheck.pyc
-%%PYTHON_SITELIBDIR%%/coot/libcheck.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/libcheck.pyo
 %%PYTHON_SITELIBDIR%%/coot/ligand_check.py
 %%PYTHON_SITELIBDIR%%/coot/ligand_check.pyc
-%%PYTHON_SITELIBDIR%%/coot/ligand_check.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/ligand_check.pyo
 %%PYTHON_SITELIBDIR%%/coot/ligand_validation_sliders.py
 %%PYTHON_SITELIBDIR%%/coot/ligand_validation_sliders.pyc
-%%PYTHON_SITELIBDIR%%/coot/ligand_validation_sliders.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/ligand_validation_sliders.pyo
 %%PYTHON_SITELIBDIR%%/coot/local_code.py
 %%PYTHON_SITELIBDIR%%/coot/local_code.pyc
-%%PYTHON_SITELIBDIR%%/coot/local_code.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/local_code.pyo
 %%PYTHON_SITELIBDIR%%/coot/mutate.py
 %%PYTHON_SITELIBDIR%%/coot/mutate.pyc
-%%PYTHON_SITELIBDIR%%/coot/mutate.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/mutate.pyo
 %%PYTHON_SITELIBDIR%%/coot/ncs.py
 %%PYTHON_SITELIBDIR%%/coot/ncs.pyc
-%%PYTHON_SITELIBDIR%%/coot/ncs.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/ncs.pyo
 %%PYTHON_SITELIBDIR%%/coot/parse_pisa_xml.py
 %%PYTHON_SITELIBDIR%%/coot/parse_pisa_xml.pyc
-%%PYTHON_SITELIBDIR%%/coot/parse_pisa_xml.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/parse_pisa_xml.pyo
 %%PYTHON_SITELIBDIR%%/coot/pdbe_validation_data.py
 %%PYTHON_SITELIBDIR%%/coot/pdbe_validation_data.pyc
-%%PYTHON_SITELIBDIR%%/coot/pdbe_validation_data.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/pdbe_validation_data.pyo
 %%PYTHON_SITELIBDIR%%/coot/povray.py
 %%PYTHON_SITELIBDIR%%/coot/povray.pyc
-%%PYTHON_SITELIBDIR%%/coot/povray.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/povray.pyo
 %%PYTHON_SITELIBDIR%%/coot/python_coot_docs.py
 %%PYTHON_SITELIBDIR%%/coot/python_coot_docs.pyc
-%%PYTHON_SITELIBDIR%%/coot/python_coot_docs.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/python_coot_docs.pyo
 %%PYTHON_SITELIBDIR%%/coot/raster3d.py
 %%PYTHON_SITELIBDIR%%/coot/raster3d.pyc
-%%PYTHON_SITELIBDIR%%/coot/raster3d.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/raster3d.pyo
 %%PYTHON_SITELIBDIR%%/coot/rcrane/CHANGELOG.txt
 %%PYTHON_SITELIBDIR%%/coot/rcrane/LICENSE.txt
 %%PYTHON_SITELIBDIR%%/coot/rcrane/NOTICE.txt
@@ -457,46 +457,46 @@ lib/libcootilus.so.0.0.0
 %%PYTHON_SITELIBDIR%%/coot/rcrane/traceGui.py
 %%PYTHON_SITELIBDIR%%/coot/rcrane_loader.py
 %%PYTHON_SITELIBDIR%%/coot/rcrane_loader.pyc
-%%PYTHON_SITELIBDIR%%/coot/rcrane_loader.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/rcrane_loader.pyo
 %%PYTHON_SITELIBDIR%%/coot/redefine_functions.py
 %%PYTHON_SITELIBDIR%%/coot/redefine_functions.pyc
-%%PYTHON_SITELIBDIR%%/coot/redefine_functions.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/redefine_functions.pyo
 %%PYTHON_SITELIBDIR%%/coot/refmac.py
 %%PYTHON_SITELIBDIR%%/coot/refmac.pyc
-%%PYTHON_SITELIBDIR%%/coot/refmac.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/refmac.pyo
 %%PYTHON_SITELIBDIR%%/coot/remote_control.py
 %%PYTHON_SITELIBDIR%%/coot/remote_control.pyc
-%%PYTHON_SITELIBDIR%%/coot/remote_control.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/remote_control.pyo
 %%PYTHON_SITELIBDIR%%/coot/res_spec_utils.py
 %%PYTHON_SITELIBDIR%%/coot/res_spec_utils.pyc
-%%PYTHON_SITELIBDIR%%/coot/res_spec_utils.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/res_spec_utils.pyo
 %%PYTHON_SITELIBDIR%%/coot/run_mogul.py
 %%PYTHON_SITELIBDIR%%/coot/run_mogul.pyc
-%%PYTHON_SITELIBDIR%%/coot/run_mogul.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/run_mogul.pyo
 %%PYTHON_SITELIBDIR%%/coot/shelx.py
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-%%PYTHON_SITELIBDIR%%/coot/shelx.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/shelx.pyo
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-%%PYTHON_SITELIBDIR%%/coot/shelx_extensions.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/shelx_extensions.pyo
 %%PYTHON_SITELIBDIR%%/coot/template_key_bindings.py
 %%PYTHON_SITELIBDIR%%/coot/template_key_bindings.pyc
-%%PYTHON_SITELIBDIR%%/coot/template_key_bindings.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/template_key_bindings.pyo
 %%PYTHON_SITELIBDIR%%/coot/tips.py
 %%PYTHON_SITELIBDIR%%/coot/tips.pyc
-%%PYTHON_SITELIBDIR%%/coot/tips.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/tips.pyo
 %%PYTHON_SITELIBDIR%%/coot/tips_gui.py
 %%PYTHON_SITELIBDIR%%/coot/tips_gui.pyc
-%%PYTHON_SITELIBDIR%%/coot/tips_gui.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/tips_gui.pyo
 %%PYTHON_SITELIBDIR%%/coot/user_define_restraints.py
 %%PYTHON_SITELIBDIR%%/coot/user_define_restraints.pyc
-%%PYTHON_SITELIBDIR%%/coot/user_define_restraints.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/coot/user_define_restraints.pyo
 %%PYTHON_SITELIBDIR%%/lidia/__init__.py
 %%PYTHON_SITELIBDIR%%/lidia/__init__.pyc
-%%PYTHON_SITELIBDIR%%/lidia/__init__.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/lidia/__init__.pyo
 %%PYTHON_SITELIBDIR%%/lidia/fetch.py
 %%PYTHON_SITELIBDIR%%/lidia/fetch.pyc
-%%PYTHON_SITELIBDIR%%/lidia/fetch.%%PYTHON_PYOEXTENSION%%
+%%PYTHON_SITELIBDIR%%/lidia/fetch.pyo
 libexec/coot-bin
 libexec/coot-density-score-by-residue-bin
 libexec/coot-make-ligands-db