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author | yuri <yuri@FreeBSD.org> | 2018-07-08 08:24:55 +0800 |
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committer | yuri <yuri@FreeBSD.org> | 2018-07-08 08:24:55 +0800 |
commit | fc3b3bff8d3bf5a0bab038b69f6baf2a2ba105ee (patch) | |
tree | 2771e7ca300ecea3a901bf9b8c925cd7718f6418 /science | |
parent | 5a18904783f8160780d3b2db9c003cc22d2014f3 (diff) | |
download | freebsd-ports-gnome-fc3b3bff8d3bf5a0bab038b69f6baf2a2ba105ee.tar.gz freebsd-ports-gnome-fc3b3bff8d3bf5a0bab038b69f6baf2a2ba105ee.tar.zst freebsd-ports-gnome-fc3b3bff8d3bf5a0bab038b69f6baf2a2ba105ee.zip |
New port: science/libccp4: Protein X-ray crystallography toolkit
Diffstat (limited to 'science')
-rw-r--r-- | science/Makefile | 1 | ||||
-rw-r--r-- | science/libccp4/Makefile | 31 | ||||
-rw-r--r-- | science/libccp4/distinfo | 3 | ||||
-rw-r--r-- | science/libccp4/pkg-descr | 12 | ||||
-rw-r--r-- | science/libccp4/pkg-plist | 44 |
5 files changed, 91 insertions, 0 deletions
diff --git a/science/Makefile b/science/Makefile index 985a4e52924a..ca7bd7a274a8 100644 --- a/science/Makefile +++ b/science/Makefile @@ -89,6 +89,7 @@ SUBDIR += kst2 SUBDIR += lamprop SUBDIR += libaec + SUBDIR += libccp4 SUBDIR += libcint SUBDIR += libctl SUBDIR += libefp diff --git a/science/libccp4/Makefile b/science/libccp4/Makefile new file mode 100644 index 000000000000..9d00c608b7ff --- /dev/null +++ b/science/libccp4/Makefile @@ -0,0 +1,31 @@ +# $FreeBSD$ + +PORTNAME= libccp4 +DISTVERSION= 6.5.1 +CATEGORIES= science +MASTER_SITES= ftp://ftp.ccp4.ac.uk/opensource/ + +MAINTAINER= yuri@FreeBSD.org +COMMENT= Protein X-ray crystallography toolkit + +LICENSE= GPLv3 LGPL3 +LICENSE_COMB= dual +LICENSE_FILE_GPLv3= ${WRKSRC}/COPYING +LICENSE_FILE_LGPL3= ${WRKSRC}/COPYING.LESSER + +LIB_DEPENDS= libmmdb2.so:science/mmdb2 + +USES= fortran gmake libtool localbase:ldflags +GNU_CONFIGURE= yes +CONFIGURE_ARGS= --enable-shared --disable-static +INSTALL_TARGET= install-strip +USE_LDCONFIG= yes + +CFLAGS+= -fPIC +FFLAGS+= -fPIC + +post-configure: + ${REINPLACE_CMD} -e 's| -Wl,--as-needed||; s| -Wl,--no-as-needed||' ${WRKSRC}/Makefile + ${REINPLACE_CMD} -e 's|^archive_cmds=|wl="-Wl,"; archive_cmds=|' ${WRKSRC}/libtool # wl is missing otherwise for some reason + +.include <bsd.port.mk> diff --git a/science/libccp4/distinfo b/science/libccp4/distinfo new file mode 100644 index 000000000000..603fa7715ef4 --- /dev/null +++ b/science/libccp4/distinfo @@ -0,0 +1,3 @@ +TIMESTAMP = 1531007069 +SHA256 (libccp4-6.5.1.tar.gz) = 280b473d950cdf8837ef66147ec581104298b892399bd856f13b096f2395dbe5 +SIZE (libccp4-6.5.1.tar.gz) = 947521 diff --git a/science/libccp4/pkg-descr b/science/libccp4/pkg-descr new file mode 100644 index 000000000000..6b560a6582e1 --- /dev/null +++ b/science/libccp4/pkg-descr @@ -0,0 +1,12 @@ +CCP4 exists to produce and support a world-leading, integrated suite of programs +that allows researchers to determine macromolecular structures by X-ray +crystallography, and other biophysical techniques. CCP4 aims to develop and +support the development of cutting edge approaches to experimental determination +and analysis of protein structure, and integrate these approaches into the +suite. CCP4 is a community based resource that supports the widest possible +researcher community, embracing academic, not for profit, and for profit +research. CCP4 aims to play a key role in the education and training of +scientists in experimental structural biology. It encourages the wide +dissemination of new ideas, techniques and practice. + +WWW: https://www.ccp4.ac.uk/ diff --git a/science/libccp4/pkg-plist b/science/libccp4/pkg-plist new file mode 100644 index 000000000000..be093c7c61b1 --- /dev/null +++ b/science/libccp4/pkg-plist @@ -0,0 +1,44 @@ +include/ccp4/ccp4_array.h +include/ccp4/ccp4_errno.h +include/ccp4/ccp4_file_err.h +include/ccp4/ccp4_fortran.h +include/ccp4/ccp4_general.h +include/ccp4/ccp4_parser.h +include/ccp4/ccp4_program.h +include/ccp4/ccp4_spg.h +include/ccp4/ccp4_sysdep.h +include/ccp4/ccp4_types.h +include/ccp4/ccp4_unitcell.h +include/ccp4/ccp4_utils.h +include/ccp4/ccp4_vars.h +include/ccp4/cmap_data.h +include/ccp4/cmap_errno.h +include/ccp4/cmap_header.h +include/ccp4/cmap_labels.h +include/ccp4/cmap_skew.h +include/ccp4/cmap_stats.h +include/ccp4/cmaplib.h +include/ccp4/cmaplib_f.h +include/ccp4/cmtzlib.h +include/ccp4/csymlib.h +include/ccp4/cvecmat.h +include/ccp4/library_file.h +include/ccp4/mtzdata.h +include/ccp4/overview.h +include/ccp4/pack_c.h +include/ccp4/w32mvs.h +lib/libccp4c.so +lib/libccp4c.so.0 +lib/libccp4c.so.0.0.0 +lib/libccp4f.so +lib/libccp4f.so.0 +lib/libccp4f.so.0.0.0 +libdata/pkgconfig/libccp4c.pc +libdata/pkgconfig/libccp4f.pc +share/atomsf.lib +share/atomsf_electron.lib +share/atomsf_neutron.lib +share/ccp4/ccp4-config.cmake +share/font84.ascii +share/syminfo.lib +share/symop.lib |