Update to version 0.13.1.

3 files changed, 83 insertions, 25 deletions

diff --git a/science/py-scikit-learn/Makefile b/science/py-scikit-learn/Makefile
index 4df0267beb09..91d6c7c4381e 100644
--- a/science/py-scikit-learn/Makefile
+++ b/science/py-scikit-learn/Makefile
@@ -3,7 +3,7 @@
 # $FreeBSD$
 
 PORTNAME=	scikit-learn
-PORTVERSION=	0.12.1
+PORTVERSION=	0.13.1
 CATEGORIES=	science python
 MASTER_SITES=	${MASTER_SITE_CHEESESHOP}
 MASTER_SITE_SUBDIR=source/s/scikit-learn
diff --git a/science/py-scikit-learn/distinfo b/science/py-scikit-learn/distinfo
index 1dcee94aee08..08af1a44f80b 100644
--- a/science/py-scikit-learn/distinfo
+++ b/science/py-scikit-learn/distinfo
@@ -1,2 +1,2 @@
-SHA256 (scikit-learn-0.12.1.tar.gz) = f542e58a15c93e118036801b55441470e9fc668e8811c39cc0f935a800ff8eaf
-SIZE (scikit-learn-0.12.1.tar.gz) = 2964072
+SHA256 (scikit-learn-0.13.1.tar.gz) = a6e4759a779ba792435d096c882a0d66ee29d369755c09209f1a4e50877bdc94
+SIZE (scikit-learn-0.13.1.tar.gz) = 3477412
diff --git a/science/py-scikit-learn/pkg-plist b/science/py-scikit-learn/pkg-plist
index 44c6037a8434..326dcf2ab84f 100644
--- a/science/py-scikit-learn/pkg-plist
+++ b/science/py-scikit-learn/pkg-plist
@@ -108,6 +108,12 @@
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/base.py
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/base.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/base.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/california_housing.py
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/california_housing.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/california_housing.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/covtype.py
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/covtype.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/covtype.pyo
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/data/boston_house_prices.csv
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/data/diabetes_data.csv.gz
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/data/diabetes_target.csv.gz
@@ -160,6 +166,9 @@
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_base.py
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_base.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_base.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_covtype.py
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_covtype.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_covtype.pyo
 %%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_lfw.py
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 %%PYTHON_SITELIBDIR%%/sklearn/datasets/tests/test_lfw.pyo
@@ -181,6 +190,9 @@
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/dict_learning.py
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/dict_learning.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/dict_learning.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/decomposition/factor_analysis.py
+%%PYTHON_SITELIBDIR%%/sklearn/decomposition/factor_analysis.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/decomposition/factor_analysis.pyo
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/fastica_.py
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/fastica_.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/fastica_.pyo
@@ -202,6 +214,9 @@
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_dict_learning.py
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_dict_learning.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_dict_learning.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_factor_analysis.py
+%%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_factor_analysis.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_factor_analysis.pyo
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_fastica.py
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_fastica.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_fastica.pyo
@@ -217,6 +232,9 @@
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 %%PYTHON_SITELIBDIR%%/sklearn/decomposition/tests/test_sparse_pca.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/dummy.py
+%%PYTHON_SITELIBDIR%%/sklearn/dummy.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/dummy.pyo
 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/__init__.py
 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/__init__.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/__init__.pyo
@@ -230,6 +248,9 @@
 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/gradient_boosting.py
 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/gradient_boosting.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/gradient_boosting.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/ensemble/partial_dependence.py
+%%PYTHON_SITELIBDIR%%/sklearn/ensemble/partial_dependence.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/ensemble/partial_dependence.pyo
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 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/setup.pyc
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@@ -245,12 +266,18 @@
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 %%PYTHON_SITELIBDIR%%/sklearn/ensemble/tests/test_gradient_boosting.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/ensemble/tests/test_partial_dependence.py
+%%PYTHON_SITELIBDIR%%/sklearn/ensemble/tests/test_partial_dependence.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/ensemble/tests/test_partial_dependence.pyo
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 %%PYTHON_SITELIBDIR%%/sklearn/externals/joblib/__init__.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/externals/joblib/__init__.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/externals/joblib/_compat.py
+%%PYTHON_SITELIBDIR%%/sklearn/externals/joblib/_compat.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/externals/joblib/_compat.pyo
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@@ -323,12 +350,19 @@
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 %%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/__init__.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/_hashing.so
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 %%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/dict_vectorizer.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/dict_vectorizer.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/hashing.py
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/hashing.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/hashing.pyo
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 %%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/image.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/image.pyo
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/setup.py
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/setup.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/setup.pyo
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@@ -338,6 +372,9 @@
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+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/tests/test_feature_hasher.py
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/tests/test_feature_hasher.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/feature_extraction/tests/test_feature_hasher.pyo
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@@ -398,6 +435,9 @@
 %%PYTHON_SITELIBDIR%%/sklearn/hmm.py
 %%PYTHON_SITELIBDIR%%/sklearn/hmm.pyc
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+%%PYTHON_SITELIBDIR%%/sklearn/isotonic.py
+%%PYTHON_SITELIBDIR%%/sklearn/isotonic.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/isotonic.pyo
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@@ -426,6 +466,9 @@
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+%%PYTHON_SITELIBDIR%%/sklearn/linear_model/passive_aggressive.py
+%%PYTHON_SITELIBDIR%%/sklearn/linear_model/passive_aggressive.pyc
+%%PYTHON_SITELIBDIR%%/sklearn/linear_model/passive_aggressive.pyo
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@@ -439,18 +482,6 @@
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-%%PYTHON_SITELIBDIR%%/sklearn/utils/tests/test_weighted_mode.pyc
-%%PYTHON_SITELIBDIR%%/sklearn/utils/tests/test_weighted_mode.pyo
 %%PYTHON_SITELIBDIR%%/sklearn/utils/validation.py
 %%PYTHON_SITELIBDIR%%/sklearn/utils/validation.pyc
 %%PYTHON_SITELIBDIR%%/sklearn/utils/validation.pyo
@@ -819,7 +878,6 @@
 @dirrm %%PYTHON_SITELIBDIR%%/sklearn/metrics
 @dirrm %%PYTHON_SITELIBDIR%%/sklearn/manifold
 @dirrm %%PYTHON_SITELIBDIR%%/sklearn/linear_model/tests
-@dirrm %%PYTHON_SITELIBDIR%%/sklearn/linear_model/sparse
 @dirrm %%PYTHON_SITELIBDIR%%/sklearn/linear_model
 @dirrm %%PYTHON_SITELIBDIR%%/sklearn/gaussian_process/tests
 @dirrm %%PYTHON_SITELIBDIR%%/sklearn/gaussian_process