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authormakc <makc@FreeBSD.org>2013-03-28 21:10:23 +0800
committermakc <makc@FreeBSD.org>2013-03-28 21:10:23 +0800
commitbf305361dd463782a8dba7b1ce0c3c5012319ea0 (patch)
tree2815aefe315f2fb505a1a6b8ef8b2efdc403ccf9 /science
parent31a6009625ff651b22ad5165a050e892483b6530 (diff)
downloadfreebsd-ports-gnome-bf305361dd463782a8dba7b1ce0c3c5012319ea0.tar.gz
freebsd-ports-gnome-bf305361dd463782a8dba7b1ce0c3c5012319ea0.tar.zst
freebsd-ports-gnome-bf305361dd463782a8dba7b1ce0c3c5012319ea0.zip
- Rename pyBioLCCC to pyteomics.biolccc (follow upstream)
- Update to 1.5.0 - Trim Makefile header
Diffstat (limited to 'science')
-rw-r--r--science/Makefile2
-rw-r--r--science/py-biolccc/Makefile22
-rw-r--r--science/py-biolccc/distinfo2
-rw-r--r--science/py-biolccc/pkg-plist6
-rw-r--r--science/pyteomics.biolccc/Makefile15
-rw-r--r--science/pyteomics.biolccc/distinfo2
-rw-r--r--science/pyteomics.biolccc/pkg-descr (renamed from science/py-biolccc/pkg-descr)4
-rw-r--r--science/pyteomics.biolccc/pkg-plist10
8 files changed, 30 insertions, 33 deletions
diff --git a/science/Makefile b/science/Makefile
index f32ce1b10749..63031f98418c 100644
--- a/science/Makefile
+++ b/science/Makefile
@@ -152,7 +152,6 @@
SUBDIR += psi3
SUBDIR += psychopy
SUBDIR += py-DendroPy
- SUBDIR += py-biolccc
SUBDIR += py-h5py
SUBDIR += py-hcluster
SUBDIR += py-mdp
@@ -178,6 +177,7 @@
SUBDIR += pycdf
SUBDIR += pynn
SUBDIR += pyteomics
+ SUBDIR += pyteomics.biolccc
SUBDIR += qcl
SUBDIR += qtresistors
SUBDIR += ruby-dcl
diff --git a/science/py-biolccc/Makefile b/science/py-biolccc/Makefile
deleted file mode 100644
index c73ea1c0744f..000000000000
--- a/science/py-biolccc/Makefile
+++ /dev/null
@@ -1,22 +0,0 @@
-# New ports collection makefile for: py-biolccc
-# Date created: 2010-10-24
-# Whom: Max Brazhnikov <makc@FreeBSD.org>
-#
-# $FreeBSD$
-#
-
-PORTNAME= BioLCCC
-PORTVERSION= 1.4.0
-CATEGORIES= science python
-MASTER_SITES= CHEESESHOP/source/p/${PYDISTUTILS_PKGNAME}/
-PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
-DISTNAME= ${PYDISTUTILS_PKGNAME}-${PORTVERSION}
-
-MAINTAINER= makc@FreeBSD.org
-COMMENT= Python bindings for BioLCCC
-
-USE_PYTHON= 2.6+
-USE_PYDISTUTILS= yes
-PYDISTUTILS_PKGNAME= pyBioLCCC
-
-.include <bsd.port.mk>
diff --git a/science/py-biolccc/distinfo b/science/py-biolccc/distinfo
deleted file mode 100644
index bb9199c5b135..000000000000
--- a/science/py-biolccc/distinfo
+++ /dev/null
@@ -1,2 +0,0 @@
-SHA256 (pyBioLCCC-1.4.0.tar.gz) = f01465719300e176e9902b8925ce52c9c4f98824a281fadb3c63beffc0df7b62
-SIZE (pyBioLCCC-1.4.0.tar.gz) = 109926
diff --git a/science/py-biolccc/pkg-plist b/science/py-biolccc/pkg-plist
deleted file mode 100644
index 874e146b9590..000000000000
--- a/science/py-biolccc/pkg-plist
+++ /dev/null
@@ -1,6 +0,0 @@
-%%PYTHON_SITELIBDIR%%/_pyBioLCCC.so
-%%PYTHON_SITELIBDIR%%/pyBioLCCC.py
-%%PYTHON_SITELIBDIR%%/pyBioLCCC.pyc
-%%PYTHON_SITELIBDIR%%/pyBioLCCC.pyo
-@dirrmtry %%PYTHON_SITELIBDIR%%
-@dirrmtry %%PYTHON_LIBDIR%%
diff --git a/science/pyteomics.biolccc/Makefile b/science/pyteomics.biolccc/Makefile
new file mode 100644
index 000000000000..b94be7eaaf84
--- /dev/null
+++ b/science/pyteomics.biolccc/Makefile
@@ -0,0 +1,15 @@
+# $FreeBSD$
+
+PORTNAME= pyteomics.biolccc
+PORTVERSION= 1.5.0
+CATEGORIES= science python
+MASTER_SITES= CHEESESHOP/source/p/${PORTNAME}/
+PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}
+
+MAINTAINER= makc@FreeBSD.org
+COMMENT= Python bindings for BioLCCC
+
+USE_PYTHON= 2.6+
+USE_PYDISTUTILS= yes
+
+.include <bsd.port.mk>
diff --git a/science/pyteomics.biolccc/distinfo b/science/pyteomics.biolccc/distinfo
new file mode 100644
index 000000000000..1d74573e9aca
--- /dev/null
+++ b/science/pyteomics.biolccc/distinfo
@@ -0,0 +1,2 @@
+SHA256 (pyteomics.biolccc-1.5.0.tar.gz) = 1de9b941a3df33ba203fdce64c70096eb35c5aabd21458911f822bb4bff4d749
+SIZE (pyteomics.biolccc-1.5.0.tar.gz) = 110645
diff --git a/science/py-biolccc/pkg-descr b/science/pyteomics.biolccc/pkg-descr
index 48c63965cfdd..d0818e8e1ade 100644
--- a/science/py-biolccc/pkg-descr
+++ b/science/pyteomics.biolccc/pkg-descr
@@ -3,6 +3,6 @@ protein retention time in liquid chromatography. It is based on
BioLCCC model (Liquid Chromatography of Biomacromolecules at Critical
Conditions).
-pyBioLCCC is set of Python wrappings around libBioLCCC.
+pyteomics.biolccc is set of Python wrappings around libBioLCCC.
-WWW: http://theorchromo.ru/lib/
+WWW: http://pypi.python.org/pypi/pyteomics.biolccc
diff --git a/science/pyteomics.biolccc/pkg-plist b/science/pyteomics.biolccc/pkg-plist
new file mode 100644
index 000000000000..34f78a286e61
--- /dev/null
+++ b/science/pyteomics.biolccc/pkg-plist
@@ -0,0 +1,10 @@
+%%PYTHON_SITELIBDIR%%/pyteomics/__init__.py
+%%PYTHON_SITELIBDIR%%/pyteomics/__init__.pyc
+%%PYTHON_SITELIBDIR%%/pyteomics/__init__.pyo
+%%PYTHON_SITELIBDIR%%/pyteomics/_biolccc.so
+%%PYTHON_SITELIBDIR%%/pyteomics/biolccc.py
+%%PYTHON_SITELIBDIR%%/pyteomics/biolccc.pyc
+%%PYTHON_SITELIBDIR%%/pyteomics/biolccc.pyo
+@dirrmtry %%PYTHON_SITELIBDIR%%/pyteomics
+@dirrmtry %%PYTHON_SITELIBDIR%%
+@dirrmtry %%PYTHON_LIBDIR%%