diff options
Diffstat (limited to 'science/brian')
| -rw-r--r-- | science/brian/Makefile | 4 | ||||
| -rw-r--r-- | science/brian/distinfo | 4 | ||||
| -rw-r--r-- | science/brian/pkg-plist | 106 |
3 files changed, 104 insertions, 10 deletions
diff --git a/science/brian/Makefile b/science/brian/Makefile index b4f434d7cdbf..9ac83ee3d835 100644 --- a/science/brian/Makefile +++ b/science/brian/Makefile @@ -6,7 +6,7 @@ # PORTNAME= brian -PORTVERSION= 1.3.0 +PORTVERSION= 1.3.1 CATEGORIES= science python MASTER_SITES= CHEESESHOP \ SF/${PORTNAME}/Brian/${PORTVERSION} @@ -17,7 +17,7 @@ COMMENT= A clock-driven simulator for spiking neural networks BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}numpy>=1.1.0:${PORTSDIR}/math/py-numpy \ ${PYTHON_PKGNAMEPREFIX}scipy>=0.6.0:${PORTSDIR}/science/py-scipy \ ${PYTHON_PKGNAMEPREFIX}matplotlib>=0.90.1:${PORTSDIR}/math/py-matplotlib -RUN_DEPENDS= ${BUILD_DEPENDS} +RUN_DEPENDS:= ${BUILD_DEPENDS} USE_ZIP= yes USE_PYTHON= 2.5+ diff --git a/science/brian/distinfo b/science/brian/distinfo index 34f2f74b87c8..2186248e2921 100644 --- a/science/brian/distinfo +++ b/science/brian/distinfo @@ -1,2 +1,2 @@ -SHA256 (brian-1.3.0.zip) = 01efaee875eb1ba418fdb94ae954e51182e756052f2807d762ac7d6a06a8a558 -SIZE (brian-1.3.0.zip) = 452055 +SHA256 (brian-1.3.1.zip) = fcf435592a2c2689dd126109c5227fa781361923b5de43a4ac6998f464436d0f +SIZE (brian-1.3.1.zip) = 546412 diff --git a/science/brian/pkg-plist b/science/brian/pkg-plist index 77bf732de4a6..7da4ff619fb7 100644 --- a/science/brian/pkg-plist +++ b/science/brian/pkg-plist @@ -121,6 +121,21 @@ %%PYTHON_SITELIBDIR%%/brian/experimental/coincidence_detection.py %%PYTHON_SITELIBDIR%%/brian/experimental/coincidence_detection.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/coincidence_detection.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/__init__.py +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/__init__.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/__init__.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/compare.py +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/compare.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/compare.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/fast_compensation.py +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/fast_compensation.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/fast_compensation.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/filter.py +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/filter.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/compensation/filter.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/connectionmonitor.py +%%PYTHON_SITELIBDIR%%/brian/experimental/connectionmonitor.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/connectionmonitor.pyo %%PYTHON_SITELIBDIR%%/brian/experimental/cuda/__init__.py %%PYTHON_SITELIBDIR%%/brian/experimental/cuda/__init__.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/cuda/__init__.pyo @@ -133,6 +148,33 @@ %%PYTHON_SITELIBDIR%%/brian/experimental/integrodiff.py %%PYTHON_SITELIBDIR%%/brian/experimental/integrodiff.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/integrodiff.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/__init__.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/__init__.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/__init__.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/benchmark.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/benchmark.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/benchmark.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/compensation.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/compensation.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/compensation.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/criteria.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/criteria.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/criteria.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/gpu_modelfitting.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/gpu_modelfitting.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/gpu_modelfitting.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/lp2bert.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/lp2bert.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/lp2bert.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/modelfitting.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/modelfitting.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/modelfitting.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/modelfitting_old.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/modelfitting_old.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/modelfitting_old.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/simulator.py +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/simulator.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting/simulator.pyo %%PYTHON_SITELIBDIR%%/brian/experimental/morphology.py %%PYTHON_SITELIBDIR%%/brian/experimental/morphology.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/morphology.pyo @@ -145,12 +187,24 @@ %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/__init__.py %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/__init__.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/__init__.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/example_AER.py +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/example_AER.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/example_AER.pyo %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/realtime.py %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/realtime.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/realtime.pyo %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/spikequeue.py %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/spikequeue.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/spikequeue.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_AERSpikeMonitor.py +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_AERSpikeMonitor.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_AERSpikeMonitor.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_newspikegengroup.py +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_newspikegengroup.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_newspikegengroup.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_struct_vs_np.py +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_struct_vs_np.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic/test_struct_vs_np.pyo %%PYTHON_SITELIBDIR%%/brian/experimental/new_c_propagate.py %%PYTHON_SITELIBDIR%%/brian/experimental/new_c_propagate.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/new_c_propagate.pyo @@ -160,6 +214,18 @@ %%PYTHON_SITELIBDIR%%/brian/experimental/spatialneuron.py %%PYTHON_SITELIBDIR%%/brian/experimental/spatialneuron.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/spatialneuron.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/__init__.py +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/__init__.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/__init__.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/STDP1.py +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/STDP1.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/STDP1.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/eventbased_stdp.py +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/eventbased_stdp.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/stdp/eventbased_stdp.pyo +%%PYTHON_SITELIBDIR%%/brian/experimental/stochasticconnection.py +%%PYTHON_SITELIBDIR%%/brian/experimental/stochasticconnection.pyc +%%PYTHON_SITELIBDIR%%/brian/experimental/stochasticconnection.pyo %%PYTHON_SITELIBDIR%%/brian/experimental/trace_analysis.py %%PYTHON_SITELIBDIR%%/brian/experimental/trace_analysis.pyc %%PYTHON_SITELIBDIR%%/brian/experimental/trace_analysis.pyo @@ -202,6 +268,9 @@ %%PYTHON_SITELIBDIR%%/brian/hears/filtering/firfilterbank.py %%PYTHON_SITELIBDIR%%/brian/hears/filtering/firfilterbank.pyc %%PYTHON_SITELIBDIR%%/brian/hears/filtering/firfilterbank.pyo +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/fractionaldelay.py +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/fractionaldelay.pyc +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/fractionaldelay.pyo %%PYTHON_SITELIBDIR%%/brian/hears/filtering/gpulinearfilterbank.py %%PYTHON_SITELIBDIR%%/brian/hears/filtering/gpulinearfilterbank.pyc %%PYTHON_SITELIBDIR%%/brian/hears/filtering/gpulinearfilterbank.pyo @@ -211,9 +280,18 @@ %%PYTHON_SITELIBDIR%%/brian/hears/filtering/linearfilterbank.py %%PYTHON_SITELIBDIR%%/brian/hears/filtering/linearfilterbank.pyc %%PYTHON_SITELIBDIR%%/brian/hears/filtering/linearfilterbank.pyo -%%PYTHON_SITELIBDIR%%/brian/hears/filtering/pmfr.py -%%PYTHON_SITELIBDIR%%/brian/hears/filtering/pmfr.pyc -%%PYTHON_SITELIBDIR%%/brian/hears/filtering/pmfr.pyo +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/tan_carney.py +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/tan_carney.pyc +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/tan_carney.pyo +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/test.py +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/test.pyc +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/test.pyo +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/test2.py +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/test2.pyc +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/test2.pyo +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/zilany.py +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/zilany.pyc +%%PYTHON_SITELIBDIR%%/brian/hears/filtering/zilany.pyo %%PYTHON_SITELIBDIR%%/brian/hears/hrtf/__init__.py %%PYTHON_SITELIBDIR%%/brian/hears/hrtf/__init__.pyc %%PYTHON_SITELIBDIR%%/brian/hears/hrtf/__init__.pyo @@ -244,12 +322,21 @@ %%PYTHON_SITELIBDIR%%/brian/library/__init__.py %%PYTHON_SITELIBDIR%%/brian/library/__init__.pyc %%PYTHON_SITELIBDIR%%/brian/library/__init__.pyo -%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology.py -%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology.pyc -%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology.pyo %%PYTHON_SITELIBDIR%%/brian/library/ionic_currents.py %%PYTHON_SITELIBDIR%%/brian/library/ionic_currents.pyc %%PYTHON_SITELIBDIR%%/brian/library/ionic_currents.pyo +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/__init__.py +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/__init__.pyc +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/__init__.pyo +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/electrode_compensation.py +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/electrode_compensation.pyc +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/electrode_compensation.pyo +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/electrophysiology_models.py +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/electrophysiology_models.pyc +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/electrophysiology_models.pyo +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/trace_analysis.py +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/trace_analysis.pyc +%%PYTHON_SITELIBDIR%%/brian/library/electrophysiology/trace_analysis.pyo %%PYTHON_SITELIBDIR%%/brian/library/modelfitting/__init__.py %%PYTHON_SITELIBDIR%%/brian/library/modelfitting/__init__.pyc %%PYTHON_SITELIBDIR%%/brian/library/modelfitting/__init__.pyo @@ -424,6 +511,9 @@ %%PYTHON_SITELIBDIR%%/brian/tools/tabulate.py %%PYTHON_SITELIBDIR%%/brian/tools/tabulate.pyc %%PYTHON_SITELIBDIR%%/brian/tools/tabulate.pyo +%%PYTHON_SITELIBDIR%%/brian/tools/taskfarm.py +%%PYTHON_SITELIBDIR%%/brian/tools/taskfarm.pyc +%%PYTHON_SITELIBDIR%%/brian/tools/taskfarm.pyo %%PYTHON_SITELIBDIR%%/brian/units.py %%PYTHON_SITELIBDIR%%/brian/units.pyc %%PYTHON_SITELIBDIR%%/brian/units.pyo @@ -500,13 +590,17 @@ %%PYTHON_SITELIBDIR%%/brian/utils/sparse_patch/__init__.pyo @dirrm %%PYTHON_SITELIBDIR%%/brian/connections @dirrm %%PYTHON_SITELIBDIR%%/brian/deprecated +@dirrm %%PYTHON_SITELIBDIR%%/brian/experimental/compensation @dirrm %%PYTHON_SITELIBDIR%%/brian/experimental/codegen @dirrm %%PYTHON_SITELIBDIR%%/brian/experimental/cuda +@dirrm %%PYTHON_SITELIBDIR%%/brian/experimental/modelfitting @dirrm %%PYTHON_SITELIBDIR%%/brian/experimental/neuromorphic +@dirrm %%PYTHON_SITELIBDIR%%/brian/experimental/stdp @dirrm %%PYTHON_SITELIBDIR%%/brian/experimental @dirrm %%PYTHON_SITELIBDIR%%/brian/hears/filtering @dirrm %%PYTHON_SITELIBDIR%%/brian/hears/hrtf @dirrm %%PYTHON_SITELIBDIR%%/brian/hears +@dirrm %%PYTHON_SITELIBDIR%%/brian/library/electrophysiology @dirrm %%PYTHON_SITELIBDIR%%/brian/library/modelfitting @dirrm %%PYTHON_SITELIBDIR%%/brian/library @dirrm %%PYTHON_SITELIBDIR%%/brian/tests/testcorrectness |