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* biology/molden: 5.0.7 -> 5.4pi2016-01-193-187/+795
| | | | | | | | | | | | | | Changes: - Missing hydrogens atoms of HETATM molecules (pdb files) are stored locally. - Pdb files can now be clipped. - Fixes missing residues. Introduces an alternative way of generating rotamers, without using z-matrices. This potentially a faster algorithm. - Supports Movie making through avconv/ffmpeg. - calculates the Electron Localization Function (ELF). - Updated code of ambfor/ambmd to speed up optimisations/MD of proteins solvated in water (Jan, 2014). PR: 204341
* - Update to version 5.0.2sperber2012-12-014-197/+42
| | | | | | | | | | - Add MAKE_JOBS_UNSAFE - Convert to optionsng PR: ports/171970 Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com> Approved by: beat (mentor) Feature safe: yes
* - Remove conditional checks relevant only on FreeBSD 5.x and olderpav2009-01-061-5/+1
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* - Roll back to 4.6 as 4.7 is the development version and is constantly beingwxs2008-11-112-44/+53
| | | | | | | | re-rolled. - Move post-patch target into files/patch-xwin.c to remove sed invocation. - Respect NOPORTDATA and DATADIR. - Bring files/patch-aa back (to preserve history) and retire patch-makefile. - Fixup files/patch-xwin.c so it applies cleanly to this version.
* Update to 4.7wxs2008-11-055-70/+238
| | | | | PR: ports/128476 Submitted by: fulvio ciriaco <oivulf@gmail.com>
* Unbreak building for 8-x.bsam2008-08-161-0/+114
| | | | Submitted by: Steve Kargl <sgk at troutmask.apl.washington.edu> at ports@ ML
* - Remove unneeded dependency from gtk12/gtk20 [1]miwi2008-04-201-4/+4
| | | | | | | | | | | | | | | - Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG - Remove X11BASE support in favor of LOCALBASE or PREFIX - Use USE_LDCONFIG instead of INSTALLS_SHLIB - Remove unneeded USE_GCC 3.4+ Thanks to all Helpers: Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr, ehaupt, nox, itetcu, flz, pav PR: 116263 Tested on: pointyhat Approved by: portmgr (pav)
* - Update to 4.5clsung2007-04-241-9/+9
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* Migrated to gfortran.maho2007-01-092-1/+11
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* Unbreak: molden has been updated on Aug 17, with the same DISTNAME.thierry2006-09-171-14/+23
| | | | Changelog at <http://www.cmbi.ru.nl/molden/HISTORY>.
* - Unbreak by updating to 4.4barner2005-12-011-16/+14
| | | | | | | - Add dependecy to MESA PR: ports/89795 Submitted by: Johan van Selst <johans@stack.nl>
* enhancement, build and install the opengl viewer, moldenogl.maho2003-07-191-71/+60
| | | | | | | | | | update to 3.9, not 3.8, which is newer :) Committed by maintainer timeout: > Sat Apr 5 17:46:57 EST 2003 - edwin - informed maintainer PR: 47177 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
* Update to 3.8arved2003-01-081-19/+0
| | | | Approved by: rmiya@cc.hirosaki-u.ac.jp (maintainer)
* Update to 3.6.will2000-06-082-35/+43
| | | | | PR: 19091 Submitted by: MAINTAINER
* display molecular orbitals and electron densities in 2D and 3Dtaoka1999-05-072-0/+82
Submitted by: rmiya@cc.hirosaki-u.ac.jp (Ryo MIYAMOTO)
generated by cgit (git 2.34.1) at 2024-12-02 17:22:43 +0800