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* Bump PORTREVISIONS for ports depending on the canonical version of GCC andgerald2016-12-071-1/+1
| | | | | | | | | | | | | | | lang/gcc which have moved from GCC 4.8.5 to GCC 4.9.4 (at least under some circumstances such as versions of FreeBSD or platforms), part II. The first part covered ports with USE_GCC=yes, USE_GCC=any, or one of gcc-c++11-lib, openmp, nestedfct, c++11-lib as well as c++14-lang, c++11-lang, c++0x, c11 requested via USES=compiler. This adds ports with USES=fortran and ports using Mk/bsd.octave.mk which in turn has USES=fortran. PR: 214965 Reported by: thierry
* biology/molden: distfile was updated in xwin.cpi2016-12-042-4/+4
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* biology/molden: add missing LICENSE_NAMEpi2016-11-101-1/+2
| | | | Reported by: pkg-fallout
* biology/molden: fix distinfo, set LICENSEpi2016-11-102-7/+11
| | | | | | Submitted by: marino Reported by: Eduardo Lemos de Sa <eduardo.lemosdesa@gmail.com> MFH: 2016Q4
* Mark BROKEN: unfetchable, size mismatchantoine2016-10-011-0/+1
| | | | Reported by: pkg-fallout
* biology/molden: 5.4 -> 5.7pi2016-08-262-6/+4
| | | | | | | | | | - Adds editable text fields that are longer than the visible string and introduces a new way of selecting a range of amino acids. - introduces interfaces to the open source packages openbabel and pharmer. Openbabel is used to create 2D images of the molecules in a .sdf file. It is also used to do 2D fingerprint searching. Pharmer is used to pharmacophore (3D) searching against indexed databases of .sdf files.
* - Mark BROKEN: does not fetch (distfile was removed from ftp)amdmi32016-08-221-0/+2
| | | | Approved by: portmgr blanket
* - Fix trailing whitespace in pkg-descrs, categories [a-f]*amdmi32016-05-191-1/+1
| | | | Approved by: portmgr blanket
* biology/molden: updated distfile, take maintainerpi2016-01-212-4/+4
| | | | | | - upstream distfile is moving target with same version number Submitted by: antoine
* Mark BROKEN: checksum and size mismatchantoine2016-01-211-0/+1
| | | | Reported by: pkg-fallout
* biology/molden: 5.0.7 -> 5.4pi2016-01-195-192/+799
| | | | | | | | | | | | | | Changes: - Missing hydrogens atoms of HETATM molecules (pdb files) are stored locally. - Pdb files can now be clipped. - Fixes missing residues. Introduces an alternative way of generating rotamers, without using z-matrices. This potentially a faster algorithm. - Supports Movie making through avconv/ffmpeg. - calculates the Electron Localization Function (ELF). - Updated code of ambfor/ambmd to speed up optimisations/MD of proteins solvated in water (Jan, 2014). PR: 204341
* Update the default version of GCC in the Ports Collection from GCC 4.7.4gerald2014-09-111-1/+1
| | | | | | | | | | to GCC 4.8.3. Part II, Bump PORTREVISIONs. PR: 192025 Tested by: antoine (-exp runs) Approved by: portmgr (implicit)
* Catch a couple of missing convertsion to :tu/:tlbapt2014-05-051-1/+1
| | | | | Submitted by: ak With hat: portmgr
* Update the default version of GCC used in the Ports Collection fromgerald2014-03-111-0/+1
| | | | | | | | | | | GCC 4.6.4 to GCC 4.7.3. This entails updating the lang/gcc port as well as changing the default in Mk/bsd.default-versions.mk. Part II, Bump PORTREVISIONs. PR: 182136 Supported by: Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports) Tested by: bdrewery (two -exp runs)
* - Update to 5.0.7miwi2014-02-272-24/+21
| | | | | PR: 185942 Submitted by: ports fury
* - USES=fortran gmake.tijl2013-12-292-16/+15
| | | | | | | - Add dependency on xproto. - Fix build with new CFLAGS. - Staging. - New WWW.
* Update to libmpc version 1.0.1 which brings the following fixes:gerald2013-10-261-0/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | - Switched to automake 1.11.6, see CVE-2012-3386. - #14669: Fixed extraction of CC from gmp.h. - Fixed case of intermediate zero real or imaginary part in mpc_fma, found by hydra with GMP_CHECK_RANDOMIZE=1346362345. This is on top of the following changes from version 1.0 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no invariant sections) for the documentation. - 100% of all lines are covered by tests - Renamed functions . mpc_mul_2exp to mpc_mul_2ui . mpc_div_2exp to mpc_div_2ui - 0^0, which returned (NaN,NaN) previously, now returns (1,+0). - Removed compatibility with K&R compilers, which was untestable due to lack of such compilers. - New functions . mpc_log10 . mpc_mul_2si, mpc_div_2si - Speed-ups . mpc_fma - Bug fixes . mpc_div and mpc_norm now return a value indicating the effective rounding direction, as the other functions. . mpc_mul, mpc_sqr and mpc_norm now return correct results even if there are over- or underflows during the computation. . mpc_asin, mpc_proj, mpc_sqr: Wrong result when input variable has infinite part and equals output variable is corrected. . mpc_fr_sub: Wrong return value for imaginary part is corrected. Convert to the new LIB_DEPENDS standard and remove hard-coded .so versions from a couple of dependent ports. Bump PORTREVISIONS of all dependent ports. PR: 183141 Approved by: portmgr (bdrewery)
* Add NO_STAGE all over the place in preparation for the staging support (cat: ↵bapt2013-09-201-0/+1
| | | | biology)
* - Update to 5.0.6miwi2013-04-262-3/+3
| | | | | PR: 178032 Submitted by: Ports Fury
* Update to 5.0.4eadler2012-12-152-3/+3
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* - Update to version 5.0.2sperber2012-12-017-275/+79
| | | | | | | | | | - Add MAKE_JOBS_UNSAFE - Convert to optionsng PR: ports/171970 Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com> Approved by: beat (mentor) Feature safe: yes
* Mea culpa, s/Whom/Created by/danfe2012-09-231-1/+1
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* - Adjust "Created by" tag to include more complete submitter's informationdanfe2012-09-231-5/+4
| | | | | - Mute MKDIRs, remove trailing dot from RESTRICTED, drop leading indefinite article from COMMENT where appropriate
* - Reassign to the heap at maintainer's requesttabthorpe2012-09-221-6/+2
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* Switch from libglut to freeglut and retire libglut. Libglut hasn't beenkwm2012-08-051-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | developed in years and has been dropped from the MESA 8.0 distribution. Freeglut is a rewrite of glut and is actively developed and is used by many linux distributions instead of libglut. Bump all ports that directly depend on libglut because of the shlib version change. There are some extra items in this patch. *) Because freeglut doesn't have the same dependancies as libglut, some ports need extra dependencies added to USE_XORG to make them build. *) Mark graphics/f90gl broken, f90gl depends on a header that is only shipped with libglut. *) Remove option for libglut/freeglut selection in games/cake, only freeglut remains now. *) While here fix a png related build issue games/vegastrike. Thanks to miwi for running the exp-run. Approved by: portmgr (miwi) Collaboration with: zeising@ Obtained from: xorg-dev staging area.
* The vast majority of pkg-descr files had the following format when theydougb2011-10-241-4/+1
| | | | | | | | | | | | | | | | had both lines: Author: ... WWW: .... So standardize on that, and move them to the end of the file when necessary. Also fix some more whitespace, and remove more "signature tags" of varying forms, like -- name, etc. s/AUTHOR/Author/ A few other various formatting issues
* - Get Rid MD5 supportmiwi2011-03-191-1/+0
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* Bump PORTREVISION for everything that sets USE_FORTRAN=yes which nowgerald2009-09-131-1/+1
| | | | | | implies lang/gcc44 up from lang/gcc43. Approved by: portmgr
* - Unbreak fetchpav2009-08-031-1/+1
| | | | Submitted by: maintainer
* - Unbreak distinfo after portrevision bumppav2009-01-102-4/+3
| | | | Reported by: pointyhat
* Bump PORTREVISION due to change of USE_FORTRAN=yes to GCC 4.3.gerald2009-01-081-0/+1
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* - Remove conditional checks relevant only on FreeBSD 5.x and olderpav2009-01-061-5/+1
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* - Roll back to 4.6 as 4.7 is the development version and is constantly beingwxs2008-11-115-110/+117
| | | | | | | | re-rolled. - Move post-patch target into files/patch-xwin.c to remove sed invocation. - Respect NOPORTDATA and DATADIR. - Bring files/patch-aa back (to preserve history) and retire patch-makefile. - Fixup files/patch-xwin.c so it applies cleanly to this version.
* Mark as broken since it has been re-rolled for the 4th(?) time.wxs2008-11-081-0/+2
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* Distfile was re-rolled. The changes were to fix some bugs in the code.wxs2008-11-073-10/+13
| | | | While I'm here, make it respect NOPORTDOCS.
* Update to 4.7wxs2008-11-058-140/+309
| | | | | PR: ports/128476 Submitted by: fulvio ciriaco <oivulf@gmail.com>
* Unbreak building for 8-x.bsam2008-08-162-4/+114
| | | | Submitted by: Steve Kargl <sgk at troutmask.apl.washington.edu> at ports@ ML
* - Mark BROKEN on -CURRENT: error: 'linkat' redeclared as different kind of ↵pav2008-04-261-0/+4
| | | | | | symbol Reported by: pointyhat
* - Remove unneeded dependency from gtk12/gtk20 [1]miwi2008-04-203-11/+10
| | | | | | | | | | | | | | | - Remove USE_XLIB/USE_X_PREFIX/USE_XPM in favor of USE_XORG - Remove X11BASE support in favor of LOCALBASE or PREFIX - Use USE_LDCONFIG instead of INSTALLS_SHLIB - Remove unneeded USE_GCC 3.4+ Thanks to all Helpers: Dmitry Marakasov, Chess Griffin, beech@, dinoex, rafan, gahr, ehaupt, nox, itetcu, flz, pav PR: 116263 Tested on: pointyhat Approved by: portmgr (pav)
* Now we use USE_FORTRAN=yes to use FORTRAN compiler.maho2007-07-121-5/+1
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* - Welcome X.org 7.2 \o/.flz2007-05-202-3/+4
| | | | | - Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}. - Bump PORTREVISION for ports intalling files in ${X11BASE}.
* - Update to 4.5clsung2007-04-243-14/+13
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* - Fix typomiwi2007-01-231-1/+1
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* Using only gfortran42. not gcc42.maho2007-01-122-6/+10
| | | | Bump portrevision.
* Migrated to gfortran.maho2007-01-093-6/+13
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* Unbreak: molden has been updated on Aug 17, with the same DISTNAME.thierry2006-09-174-23/+35
| | | | Changelog at <http://www.cmbi.ru.nl/molden/HISTORY>.
* BROKEN: Size mismatch. Since this is unmaintained, deprecate and schedulekris2006-09-041-0/+4
| | | | for termination on 2006-12-01
* NO_CDROM and NO_PACKAGE are not appropriate herekris2006-09-031-3/+1
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* Remove USE_REINPLACE from all categories starting with Bedwin2006-05-041-1/+0
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* - Update graphics/libglut to 6.4.1.sem2006-01-121-1/+3
| | | | | | | | | | | - Shared lib version and PORTREVISION bumb for all affected ports. While I'm here: - Remove USE_MESA knob where it was (35 ports). It marked as depricated for 2 years. PR: ports/90247 Submitted by: Ermal Lu?i <eri--@albabsd.org>
* - Unbreak by updating to 4.4barner2005-12-014-25/+22
| | | | | | | - Add dependecy to MESA PR: ports/89795 Submitted by: Johan van Selst <johans@stack.nl>
* - BROKEN: Size mismatchpav2005-11-241-0/+2
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* o update to 4.3maho2005-01-202-7/+4
| | | | | o unbreak o due to no fix for long period, drop maintainership to ports.
* This port is scheduled to be removed on 2005-02-18 if it is stillkris2004-12-191-0/+2
| | | | broken at that time, and a fix has not been submitted to GNATS.
* BROKEN: Checksum mismatchkris2004-06-201-0/+2
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* Cosmetic fix: use %%DOCSDIR%% macro.osa2003-10-221-4/+4
| | | | | | | No functionally changes. Submitted by: Oleg Karachevtsev <ok@etrust.ru> A part of PR: 57992
* enhancement, build and install the opengl viewer, moldenogl.maho2003-07-194-74/+64
| | | | | | | | | | update to 3.9, not 3.8, which is newer :) Committed by maintainer timeout: > Sat Apr 5 17:46:57 EST 2003 - edwin - informed maintainer PR: 47177 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
* De-pkg-comment.knu2003-02-212-1/+1
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* Update to 3.8arved2003-01-083-22/+6
| | | | Approved by: rmiya@cc.hirosaki-u.ac.jp (maintainer)
* Note distribution term.sada2002-05-271-8/+6
| | | | Requested by: maintainer
* Back my last commit out.sada2002-05-232-2/+2
| | | | | | We couldn't update distinfo without inspecting distfile's changes. PR: ports/37476 Suggested by: kris
* distfile has silently changed,sada2002-05-182-1/+2
| | | | | | so md5 has to be rewritten. PR: ports/37476 Submitted by: maintainer
* o update to 3.7.sf2002-01-242-34/+7
| | | | | | | | | differences from the PR: - this port requires Xlib so add USE_XLIB. - remove unnecessary PORTREVISION. PR: 34196 Submitted by: maintainer
* chase checksum for repacked distfile almost an year ago.sf2001-11-063-2/+3
| | | | | | | | | Maintainer does not have previous distfile. As the distfile for this port is not distributable, it is OK to me to change distinfo now. PR: 31010 Submitted by: maintainer
* Add NOPORTDOCS support to pkg-plistijliao2001-07-091-51/+51
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* Change MASTER_SITE and FTP/WWW lines: caos.kun.nl is cmbi.kun.nl now.roam2001-03-052-3/+3
| | | | | PR: 25422 Submitted by: Marc van Woerkom <marc.vanwoerkom@science-factory.com>
* A file was added to distfile and then repackaged with the same name.jeh2000-10-133-2/+5
| | | | | | | No response from MAINTAINER PR: 21345 Submitted by: Johann Visagie <wjv@cityip.co.za> (actual patch)
* Update to 3.6.will2000-06-086-114/+145
| | | | | PR: 19091 Submitted by: MAINTAINER
* Fix this port after the recent PORT{NAME,VERSION} changes. portlint(1)steve2000-05-281-2/+4
| | | | while I'm here.
* update with the new PORTNAME/PORTVERSION variablesmharo2000-04-091-4/+3
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* Forgot to remove this linecpiazza2000-02-071-1/+0
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* Don't strip things we don't know how to stripcpiazza2000-01-311-1/+1
| | | | | PR: 16445 Submitted by: Alexander Langer <alex@cichlids.com>
* echo -> ${ECHO} or ${ECHO_MSG} and in some cases, move echo stuffmharo1999-08-281-8/+8
| | | | to pkg/MESSAGE and use ${CAT} ${PKGMESSAGE}
* Change Id->FreeBSD.obrien1999-08-251-1/+1
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* Fix typos and/or cleanup WWW:.hoek1999-07-171-4/+1
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* As threatened, enforce the "Capital, no period" rule. Ellipses arehoek1999-06-271-1/+1
| | | | | permitted. Note that, given current numeric motif of PW, this is done in four equally-sized commits of 393 files each.
* Fill in a couple of missing WWW references...scrappy1999-06-051-0/+2
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* Build this port on an Alpha box instead of trying to use i386 binaries.steve1999-05-241-1/+5
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* display molecular orbitals and electron densities in 2D and 3Dtaoka1999-05-077-0/+201
Submitted by: rmiya@cc.hirosaki-u.ac.jp (Ryo MIYAMOTO)
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