| Commit message (Expand) | Author | Age | Files | Lines |
* | add gaussian98, an ab-initio molecular orbital calculation program. | sf | 2001-02-11 | 12 | -0/+822 |
* | Update to 0.84a. Generate the plist. | trevor | 2001-02-09 | 3 | -8/+10 |
* | - Update EMBOSS (biology/emboss) from 1.9.0 to 1.9.1 | kevlo | 2001-01-29 | 10 | -77/+118 |
* | update from 3.7 to 3.8 | ijliao | 2001-01-25 | 18 | -167/+706 |
* | Upgrade to version 1.9.0 | kevlo | 2001-01-24 | 6 | -13/+47 |
* | Massive style enforcement - use ^I instead of spaces for variables identation. | sobomax | 2001-01-17 | 1 | -2/+2 |
* | Clean up inefficient perl invocations; use multiple REs in the same call. | will | 2001-01-08 | 1 | -2/+2 |
* | Update to 1.2.6 | kevlo | 2000-12-23 | 4 | -7/+25 |
* | Remove trailing period and package name from the pkg-comment. | demon | 2000-12-19 | 1 | -1/+1 |
* | Update to version 5.79. | steve | 2000-12-11 | 3 | -26/+42 |
* | Update distfiles' checksums after the distfiles have been rerolled yet | roam | 2000-12-04 | 2 | -4/+5 |
* | Distfile tarballs were rerolled without notice due to a minor bug. | roam | 2000-12-01 | 1 | -4/+4 |
* | - Update port biology/emboss from 1.7.0 to 1.8.0 | jeh | 2000-11-28 | 4 | -17/+124 |
* | Make nolonger support :U. Fix to compensate for that. | jeh | 2000-11-19 | 1 | -3/+6 |
* | They made changes to the "blast" program. | jeh | 2000-11-15 | 2 | -2/+3 |
* | - This is a fairly extensive rework of this port. | jeh | 2000-11-13 | 3 | -0/+56 |
* | - This is a fairly extensive rework of this port. | jeh | 2000-11-13 | 4 | -5/+150 |
* | Change motif to a normal dependency. REQUIRES_MOTIF is now called | asami | 2000-11-08 | 1 | -1/+1 |
* | Yes. They did re-roll this version, it is legit. | jeh | 2000-11-03 | 2 | -2/+2 |
* | Updated to new version. That is the pits, the day after it becomes | jeh | 2000-11-02 | 4 | -4/+3 |
* | Make portlint happy, remove a space | jeh | 2000-11-01 | 1 | -1/+1 |
* | Update to version 1.7.0 | jeh | 2000-11-01 | 3 | -2/+11 |
* | File missing in pkg-plist | jeh | 2000-10-30 | 1 | -0/+1 |
* | New Port: biology/ncbi-toolkit | jeh | 2000-10-29 | 11 | -0/+376 |
* | Update biology/sim4 to 2000.10.19 | jeh | 2000-10-26 | 3 | -5/+7 |
* | gmake is needed | jeh | 2000-10-24 | 1 | -0/+1 |
* | Update to version 0.6.2 | jeh | 2000-10-13 | 3 | -174/+132 |
* | A file was added to distfile and then repackaged with the same name. | jeh | 2000-10-13 | 3 | -2/+5 |
* | Initial import of fastDNAml Version 1.2.2 | jeh | 2000-10-12 | 6 | -0/+93 |
* | Missing " in post-patch target | jeh | 2000-10-11 | 1 | -1/+1 |
* | PR 21608 was not processed as intented. | jeh | 2000-10-11 | 2 | -21/+22 |
* | Initial import of biology/biojava | jeh | 2000-10-10 | 6 | -0/+661 |
* | - Update to 1.6.0 | kevlo | 2000-10-10 | 3 | -363/+372 |
* | - Update biology/p5-AcePerl from 1.62 to 1.67 | kevlo | 2000-10-10 | 6 | -61/+88 |
* | Initiail version of nab (4.2) | jeh | 2000-10-10 | 17 | -0/+666 |
* | This is nab (nucleic acid builder), a language for macromolecules | jeh | 2000-10-10 | 1 | -0/+1 |
* | - Fix MASTER_SITES/DISTNAME | jeh | 2000-10-10 | 3 | -20/+19 |
* | The last commit changes the ports and therefore need a PORTREVISION bump | jeh | 2000-10-10 | 2 | -0/+2 |
* | Support PREFIX properly | jeh | 2000-10-10 | 2 | -1/+5 |
* | - Fix MASTER_SITES | jeh | 2000-10-10 | 4 | -18/+36 |
* | Add do-install target to port's Makefile. Remove patch section | trevor | 2000-10-09 | 2 | -10/+5 |
* | Change PKGDIR from pkg/ to . Also fix places where ${PKGDIR} is | asami | 2000-10-08 | 1 | -1/+1 |
* | Rename ${FILESDIR}/patch-* to ${PATCHDIR}/extra-patch-*. | asami | 2000-10-08 | 1 | -2/+2 |
* | Implement USE_GTK, part 1. | reg | 2000-10-05 | 3 | -38/+26 |
* | - Support CC/CFLAGS/PREFIX properly | jeh | 2000-10-03 | 6 | -8/+127 |
* | Correct and sort PLISTs. | reg | 2000-10-03 | 2 | -6/+6 |
* | Change MAINTAINER for my ports. | trevor | 2000-10-02 | 1 | -1/+1 |
* | Add USE_XLIB | kris | 2000-09-22 | 1 | -0/+1 |
* | respect CXX and CXXFLAGS (Kato Tsuguru) | ade | 2000-09-19 | 4 | -20/+39 |
* | Update to 0.90.d03 | nbm | 2000-09-11 | 3 | -132/+152 |
* | Fix checksum | kevlo | 2000-09-09 | 1 | -18/+1 |
* | Don't break package building on Satoshi's cluster. Explicitly depend | tg | 2000-09-08 | 1 | -1/+1 |
* | Upgrade to 1.5.0 | nbm | 2000-09-08 | 4 | -66/+113 |
* | Update to emboss 1.4.0. | nbm | 2000-09-07 | 4 | -52/+83 |
* | Update to version 2000.08.24 | kevlo | 2000-09-04 | 4 | -7/+23 |
* | USE_LIBTOOL implies GNU_CONFIGURE, so remove redundant GNU_CONFIGURE lines. | sobomax | 2000-08-21 | 1 | -1/+0 |
* | Update to emboss 1.1.0, fixing some style bugs too. | nbm | 2000-08-13 | 5 | -6/+321 |
* | Upgrade to 0.90.d02. | will | 2000-08-06 | 2 | -3/+3 |
* | Fix MASTER_SITES | jedgar | 2000-08-02 | 1 | -1/+1 |
* | Add emboss, the European Molecular Biology Open Software Suite | nbm | 2000-08-01 | 6 | -0/+700 |
* | Add py-biopython, is a collection of Python packages and modules created | nbm | 2000-07-31 | 6 | -0/+166 |
* | Add BioPerl, a collection of Perl5 mods for bioinformatics/genomics | nbm | 2000-07-28 | 7 | -0/+259 |
* | Add p5-AcePerl, a perl interface to the ACEDB genome database system | nbm | 2000-07-28 | 9 | -0/+177 |
* | Add sim4, an implementation of the sim4 algorithm for aligning expressed | nbm | 2000-07-27 | 7 | -0/+48 |
* | Add xdrawchem 0.82 - a program for drawing molecules | alex | 2000-07-19 | 7 | -0/+65 |
* | Activating the chemeq, clustalw, paml, and phylip ports. | steve | 2000-07-10 | 1 | -0/+4 |
* | Adding phylip version 3.5. | steve | 2000-07-10 | 5 | -0/+161 |
* | Add paml version 3.01. | steve | 2000-07-10 | 7 | -0/+89 |
* | Adding clustalw version 1.81. | steve | 2000-07-10 | 6 | -0/+66 |
* | Adding chemeq version 1.10. | steve | 2000-07-10 | 5 | -0/+62 |
* | - Use GTK_CONFIG/GLIB_CONFIG instead of hardcoded gtk12-config/glib12-config | steve | 2000-07-08 | 2 | -19/+27 |
* | Unbreak by extracting the correct distfile | kris | 2000-07-03 | 1 | -8/+2 |
* | ...local-distfiles... -> MASTER_SITE_LOCAL | alex | 2000-06-20 | 1 | -1/+2 |
* | fc is ftn77 now, adjust accordingly. | alex | 2000-06-12 | 3 | -5/+6 |
* | Update to version 1.0.3 | alex | 2000-06-11 | 4 | -24/+23 |
* | Clean up this port so that it installs stuff in a more proper location | will | 2000-06-09 | 3 | -138/+138 |
* | Update to the latest version as of 5 June. | knu | 2000-06-08 | 4 | -15/+26 |
* | Fix build for 4.0 and later. Make DESCR shorter. | will | 2000-06-08 | 5 | -165/+181 |
* | Update to 3.6. | will | 2000-06-08 | 6 | -114/+145 |
* | Convert to usable F77 binary, especially on 4.0 and newer. | will | 2000-06-08 | 4 | -82/+73 |
* | Fix MD5 checksum. Since I was unable to find an older version of the | will | 2000-06-05 | 1 | -1/+1 |
* | Fix this port after the recent PORT{NAME,VERSION} changes. portlint(1) | steve | 2000-05-28 | 1 | -2/+4 |
* | Update to version 2000.04.26. | steve | 2000-05-28 | 3 | -5/+3 |
* | Chase the checksum (lots of code changes) | kris | 2000-04-24 | 1 | -1/+1 |
* | WRKSRC-related fixes. | asami | 2000-04-16 | 1 | -0/+1 |
* | update with the new PORTNAME/PORTVERSION variables | mharo | 2000-04-09 | 15 | -53/+51 |
* | Remove andy@icc.surw.chel.su as maintainer from his ports..he doesn't | kris | 2000-03-29 | 1 | -1/+1 |
* | Add virtual category "linux" to Linux apps and support libs/utils. | asami | 2000-02-28 | 1 | -1/+1 |
* | Chase the checksum (minor source changes) | kris | 2000-02-27 | 1 | -1/+1 |
* | update URLs | mharo | 2000-02-24 | 1 | -2/+2 |
* | update WWW | mharo | 2000-02-24 | 1 | -1/+1 |
* | Forgot to remove this line | cpiazza | 2000-02-07 | 1 | -1/+0 |
* | Don't strip things we don't know how to strip | cpiazza | 2000-01-31 | 1 | -1/+1 |
* | fix some pkg/MESSAGE stuff | mharo | 2000-01-30 | 2 | -2/+2 |
* | Update to ver 1.2.2 | cpiazza | 2000-01-15 | 2 | -3/+3 |
* | Bump glib12 's share library version to 3, | vanilla | 1999-10-10 | 2 | -10/+2 |
* | f77(1) on the Alpha doesn't grok '-malign-double' so only use it on the | steve | 1999-09-27 | 1 | -0/+4 |
* | Enforce random pkg/COMMENT rules, including the one that states Emacs | hoek | 1999-09-18 | 2 | -2/+2 |
* | Grammar and WWW: fix. | hoek | 1999-09-18 | 1 | -7/+6 |
* | Update to new version. | steve | 1999-09-18 | 3 | -8/+5 |
* | Compile-error | taoka | 1999-09-10 | 2 | -3/+9 |
* | Compile error | taoka | 1999-09-09 | 1 | -1/+1 |
* | Added gperiodic and xmolwt | taoka | 1999-09-07 | 1 | -0/+2 |
* | Displays a periodic table of the elements. | taoka | 1999-09-07 | 5 | -0/+58 |
* | This program calculate formula weight and percent of each elements. | taoka | 1999-09-07 | 6 | -0/+82 |
* | Distfile changed on the MASTER_SITE. I have no idea if this | cpiazza | 1999-08-31 | 2 | -6/+6 |
* | Remove preceeding pkgname from some of the comments having one. | hoek | 1999-08-30 | 1 | -1/+1 |
* | grammar gnit | hoek | 1999-08-30 | 1 | -1/+1 |
* | ln -> ${LN} | mharo | 1999-08-28 | 2 | -2/+2 |
* | echo -> ${ECHO} or ${ECHO_MSG} and in some cases, move echo stuff | mharo | 1999-08-28 | 1 | -8/+8 |
* | Updated to 2.7.1 | taoka | 1999-08-25 | 3 | -11/+24 |
* | Change Id->FreeBSD. | obrien | 1999-08-25 | 14 | -14/+14 |
* | Make port depend on linux_base instead of linux_lib. | marcel | 1999-07-21 | 1 | -3/+3 |
* | Fix typos and/or cleanup WWW:. | hoek | 1999-07-17 | 4 | -18/+13 |
* | BROKEN='MD5 checksum error' | obrien | 1999-07-15 | 1 | -1/+3 |
* | Fix port after distfile change. | cpiazza | 1999-07-11 | 2 | -3/+2 |
* | Remove trailing spaces, and any periods that were hidden by them. | hoek | 1999-06-28 | 2 | -2/+2 |
* | As threatened, enforce the "Capital, no period" rule. Ellipses are | hoek | 1999-06-27 | 9 | -9/+9 |
* | Install into ${PREFIX}, not /usr/local. | cpiazza | 1999-06-26 | 3 | -7/+7 |
* | Clean up warnings for -current (g77) | cpiazza | 1999-06-25 | 1 | -7/+9 |
* | Change ${INSTALL} to use -s and -c. | cpiazza | 1999-06-24 | 1 | -45/+45 |
* | Update tinker from version 3.6 to version 3.7 | cpiazza | 1999-06-23 | 7 | -310/+289 |
* | Make the psi88 port install into PREFIX instead of a hardcoded | cpiazza | 1999-06-19 | 1 | -4/+14 |
* | The xforms ports is no longer an i386-only port. | steve | 1999-06-09 | 1 | -4/+1 |
* | Fill in a couple of missing WWW references... | scrappy | 1999-06-05 | 2 | -0/+4 |
* | Fix build for -current boxes with egcs' f77 compiler. | steve | 1999-05-24 | 2 | -11/+29 |
* | Allow this port to be built on -current i386 boxes that have egcs' f77 | steve | 1999-05-24 | 1 | -2/+11 |
* | This port doesn't build with egcs' f77 compiler. | steve | 1999-05-24 | 1 | -2/+7 |
* | Build this port on an Alpha box instead of trying to use i386 binaries. | steve | 1999-05-24 | 1 | -1/+5 |
* | Fix build for Alpha. | steve | 1999-05-24 | 1 | -1/+1 |
* | Fix build on -current (Alpha) machines. | steve | 1999-05-24 | 2 | -18/+29 |
* | Added WWW: for www-site target in DESCR | taoka | 1999-05-19 | 2 | -2/+2 |
* | Added deft and ortep3 | taoka | 1999-05-19 | 1 | -1/+3 |
* | The Oak Ridge Thermal Ellipsoid Plot Program for Crystal Structure | taoka | 1999-05-19 | 7 | -0/+594 |
* | Density functional molecular orbital calculation. | taoka | 1999-05-19 | 7 | -0/+226 |
* | Fix checksum | flathill | 1999-05-09 | 1 | -1/+1 |
* | Changed MASTER_SITES | taoka | 1999-05-08 | 1 | -2/+2 |
* | Changed MASTER_SITES | taoka | 1999-05-08 | 1 | -3/+3 |
* | Add platon and molden | taoka | 1999-05-07 | 1 | -1/+3 |
* | display molecular orbitals and electron densities in 2D and 3D | taoka | 1999-05-07 | 7 | -0/+201 |
* | the one of crystallographic tools | taoka | 1999-05-07 | 6 | -0/+175 |
* | Be able to use ${PREFIX} | taoka | 1999-05-07 | 5 | -13/+67 |
* | Fixed ${CATEGORIES} (removed misc from it) | taoka | 1999-05-06 | 1 | -2/+2 |
* | Semi-empirical (MNDO, etc.) molecular orbital calculation | taoka | 1999-05-06 | 11 | -0/+213 |
* | Plotting wavefunctions (molecular orbitals) in 3D | taoka | 1999-05-06 | 9 | -0/+365 |
* | Add mopac and psi88 (Move mopac and psi88 from misc to biology) | taoka | 1999-05-06 | 1 | -1/+3 |
* | Weasal and Wabbits and BIG FOOT. | hoek | 1999-05-03 | 6 | -17/+12 |
* | Upgrade to 2.1.1 | fenner | 1999-03-09 | 3 | -8/+16 |
* | Adjust port Makefiles to new EXTRACT_* variable defaults. See log of | asami | 1999-02-03 | 1 | -1/+3 |
* | Correct the MD5 checksum. | vanilla | 1999-01-31 | 1 | -1/+1 |
* | Added 'ONLY_FOR_ARCHS=i386' to XForms dependent ports. | simokawa | 1999-01-07 | 1 | -1/+4 |
* | Add 'ONLY_FOR_ARCHS=i386' to linux_lib dependent ports. | simokawa | 1999-01-07 | 1 | -1/+3 |
* | Change *_DEPENDS on lang/perl5 to USE_PERL5 so we won't have any | asami | 1999-01-02 | 1 | -3/+2 |
* | Update MASTER_SITES. | billf | 1998-12-10 | 2 | -4/+6 |
* | Add a comment about setting env var 'FC' to 'g77' if EGCS is to be | jkoshy | 1998-11-18 | 1 | -3/+4 |
* | Activate tinker. | jkoshy | 1998-11-17 | 1 | -1/+2 |
* | New port of the Tinker Molecular modelling program. | jkoshy | 1998-11-17 | 11 | -0/+725 |
* | Use bsd.port.{pre,post}.mk to move PORTOBJFORMAT to front, or change | asami | 1998-11-14 | 1 | -6/+8 |
* | Update of MASTER_SITES. | billf | 1998-11-13 | 1 | -2/+2 |
* | Unbreak for ELF | jseger | 1998-11-03 | 1 | -3/+1 |
* | Master site changed, update MD5. | jkoshy | 1998-10-08 | 2 | -3/+3 |
* | Checksum changed again.... | asami | 1998-09-28 | 1 | -1/+1 |
* | Remove empty doc dir on deinstall. | steve | 1998-09-27 | 1 | -0/+1 |
* | Don't strip the binary when building ELF. | steve | 1998-09-27 | 1 | -1/+5 |
* | Checksum of seaview.tar changed. | steve | 1998-09-27 | 1 | -1/+1 |
* | Mark broken for ELF because of xforms port. | steve | 1998-09-27 | 1 | -2/+4 |
* | Take the manpages out of pkg/PLIST and put them in MAN1. | steve | 1998-09-16 | 2 | -2/+3 |
* | Unbreak by making a new checksum and fixing the makefile to find a new source | jseger | 1998-08-21 | 3 | -6/+4 |
* | BROKEN: | jseger | 1998-08-21 | 1 | -1/+3 |
* | Remove manpages from pkg/PLIST | obrien | 1998-08-14 | 1 | -8/+0 |
* | Fix up dependencies for ports that moved into the x11-toolkits category. | asami | 1998-08-08 | 1 | -2/+2 |
* | Rename all USE_X11 to USE_X_PREFIX. Requires 1.279 (3.0-current) or | asami | 1998-08-05 | 1 | -2/+2 |
* | Making x11 category more useful project part 1: take out "x11" of | asami | 1998-07-28 | 2 | -4/+4 |
* | Another batch of "Add homepage." for benchmarks through converters. | hoek | 1998-07-25 | 1 | -0/+2 |
* | Turn on hmmer. | steve | 1998-07-13 | 1 | -1/+2 |
* | Initial import of hmmer version 2.0. | steve | 1998-07-13 | 6 | -0/+86 |
* | Update to 2.6b2.1. | steve | 1998-05-24 | 3 | -7/+7 |
* | mkdir -> ${MKDIR}. This also has the side-effect of making this | asami | 1998-03-31 | 1 | -2/+2 |
* | Add DIST_SUBDIR, the name "periodic.tab" is kinda generic. Speaking of which, | asami | 1998-03-17 | 2 | -7/+8 |
* | Add linux_lib DEPEND lines. | jseger | 1998-03-17 | 1 | -1/+4 |
* | Activate povchem. | vanilla | 1998-03-16 | 1 | -1/+2 |
* | Povchem is a tool to generate POV file from a PDB(Protein | vanilla | 1998-03-16 | 7 | -0/+78 |
* | Activate kinemage | jseger | 1998-01-30 | 1 | -1/+2 |
* | Import of ports/biology/kinemage 4.2 | jseger | 1998-01-30 | 5 | -0/+37 |
* | Typo (LIB_DEPEND -> LIB_DEPENDS). | asami | 1997-12-26 | 1 | -2/+2 |
* | Move pkg/INSTALL to pkg/MESSAGE, add another patch from maintainer. | vanilla | 1997-12-24 | 3 | -6/+14 |
* | Activate seaview. | vanilla | 1997-12-22 | 1 | -1/+2 |
* | Seaview is a multiple DNA sequence alignment editor. | vanilla | 1997-12-22 | 6 | -0/+72 |
* | Activate babel. | vanilla | 1997-12-22 | 1 | -1/+2 |
* | This is a port of a molecular file format converter, babel. | vanilla | 1997-12-22 | 7 | -0/+95 |
* | Activate rasmol. | vanilla | 1997-12-16 | 1 | -2/+2 |
* | rasmol is a biological molecule visualization program. | vanilla | 1997-12-16 | 6 | -0/+46 |
* | The new ports category "biology" starts here today. No Darwin | asami | 1997-12-13 | 2 | -0/+7 |