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* With portmgr hat on, reset maintainership of this port. All of wjv'sMark Linimon2005-01-221-1/+1
| | | | | other ports were reset a couple of months ago; this one appears to have been missed.
* o update to 4.3Maho Nakata2005-01-202-7/+4
| | | | | o unbreak o due to no fix for long period, drop maintainership to ports.
* Update to 0.6.2.Akinori MUSHA2004-12-263-7/+26
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* This port is scheduled to be removed on 2005-02-18 if it is stillKris Kennaway2004-12-192-0/+4
| | | | broken at that time, and a fix has not been submitted to GNATS.
* Update to version 2.0.8Kirill Ponomarev2004-12-193-10/+19
| | | | | PR: ports/75106 Submitted by: Ports Fury
* - Update to 2004.12.16Sergey Matveychuk2004-12-182-3/+3
| | | | | PR: ports/75205 Submitted by: maintainer
* Clean up wording of IGNORE output.Mark Linimon2004-12-171-1/+1
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* Unquote the IGNORE string.Mark Linimon2004-12-171-1/+1
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* With portmgr hat on, switch from BROKEN to ignore. It does indeed build.Mark Linimon2004-12-171-1/+1
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* - Fix OPTIONS handlingPav Lucistnik2004-12-121-3/+1
| | | | Pointy hat to: sem
* Not a real update with the last patch.Sergey Matveychuk2004-12-112-4/+5
| | | | The real update here.
* - This update brings seaview to the latest release (dated 09.24.04Sergey Matveychuk2004-12-111-1/+1
| | | | | | | | | | | in the FTP site). - While here add a modeline for vi, and fix a tab (cosmetic) - Make portlint happy. PR: ports/74897 Submitted by: maintainer
* - Add some sites I found with Google, as old master site don't have thisPav Lucistnik2004-12-091-1/+4
| | | | | | version anymore Reported by: pointyhat via krion
* BROKEN: Broken distinfo fileKris Kennaway2004-12-041-0/+2
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* Fix build on Python 2.4Hye-Shik Chang2004-12-021-0/+14
| | | | Spotted by: kris
* Update MASTER_SITES and WWW: lineKirill Ponomarev2004-11-272-2/+2
| | | | | PR: ports/74421 Submitted by: Ports Fury
* [new port] biology/embassySergey Matveychuk2004-11-275-0/+271
| | | | | PR: ports/74330 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* - Update to 2.9.0Sergey Matveychuk2004-11-269-1812/+1632
| | | | | | | - Pass maintainership to submitter PR: ports/74333 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* Add missing filesKris Kennaway2004-11-261-0/+11
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* - Update to 2.03Sergey Matveychuk2004-11-267-384/+175
| | | | | | | - Pass maintainership to submitter PR: ports/74332 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* - Remove a junk white space.Sergey Matveychuk2004-11-261-1/+1
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* - Update to 2.3.2Sergey Matveychuk2004-11-265-69/+38
| | | | | | | | - Add WITH_PVM knob - Pass maintainership to submitter PR: ports/74331 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* Minor cleanup.Mark Linimon2004-11-231-2/+2
| | | | | PR: ports/72094 Submitted by: M. L. Dodson <bdodson at scms dot utmb dot edu> (maintainer)
* - Update biology/biojava to 1.30Volker Stolz2004-11-223-613/+255
| | | | | | | | | - Install javadoc and example files - Assign maintainership to submitter PR: ports/73391 Submitted by: Cheng-Dae Choe Add. reviewing: hq@
* With portmgr hat on, reset inactive maintainer. These ports are now upMark Linimon2004-11-208-8/+8
| | | | for adoption.
* With portmgr hat on, reset inactive maintainer.Mark Linimon2004-11-201-1/+1
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* - Distfiles change every few days, so drop md5 checking on themPav Lucistnik2004-11-182-4/+5
| | | | Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
* Add blast, a powerful software package for gene and protein identification,Pav Lucistnik2004-11-126-0/+324
| | | | | | | | using sensitive, selective and rapid similarity searches of protein and nucleotide sequence databases. PR: ports/69636 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar>
* Bump PORTREVISIONS for all ports that depend on atk or pango to ease in theJoe Marcus Clarke2004-11-084-4/+4
| | | | big upgrade.
* - Fix build on amd64 (crude hack to pass -fPIC to c++ compiles)Pav Lucistnik2004-11-071-0/+11
| | | | | Reported by: pointyhat via kris Tested on: arved's box
* Update to 3.14Kevin Lo2004-11-063-5/+4
| | | | | PR: ports/72422 Submitted by: Choe, Cheng-Dae <whitekid@gmail.com>
* Correct a typo: s/linux-opera/linux-openmotif/g.Jeremy Messenger2004-11-021-1/+1
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* - Update to 2004.06.16Pav Lucistnik2004-11-024-167/+276
| | | | | Inspired by: ports/72726 Approved by: maintainer timeout (2 weeks)
* Chase the linux-openmotif shared library version and mark biology/spdbv asJeremy Messenger2004-11-021-1/+4
| | | | | | | | broke, I get no respone from the maintainer since Oct 22, 2004. The www/linux-opera works fine with new linux-openmotif. Also, bump PORTREVISION. To fix or update for biology/spdbv is welcome, I shall commit them if I get patch(es) in my Inbox.
* Now installs on FreeBSD 5.x.Kris Kennaway2004-10-291-7/+1
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* - Update to 1.30Pav Lucistnik2004-10-283-128/+209
| | | | | | PR: ports/71400 Submitted by: Stefan Walter <sw@gegenunendlich.de> Approved by: maintainer timeout (2 months)
* Avoid the use of != statements in ports MakefileMaho Nakata2004-10-241-1/+5
| | | | | PR: 71095 Submitted by: eik
* - Update to 3.62Pav Lucistnik2004-10-123-6/+16
| | | | | | | | - Install font files PR: ports/72212 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> Approved by: David A. Bader <dbader@ece.unm.edu> (maintainer)
* BROKEN on 5.x: Does not compileKris Kennaway2004-09-291-1/+7
| | | | Approved by: portmgr (self)
* Upgrade to latest revision to make fetchable again.Thierry Thomas2004-09-252-3/+3
| | | | Approved by: portmgr (marcus)
* Update config.h and unbreak.Thierry Thomas2004-09-241-2/+2
| | | | | | PR: ports/71505 Submitted by: maintainer Approved by: portmgr (marcus).
* The build should be fixed now, so remove BROKEN mark.Alexey Dokuchaev2004-09-231-7/+1
| | | | Approved by: portmgr (marcus), fjoe (mentor, implicit)
* BROKEN on 5.x: Does not compileKris Kennaway2004-09-191-1/+7
| | | | Approved by: portmgr (self)
* BROKEN on 5.x: Does not installKris Kennaway2004-09-191-0/+4
| | | | Approved by: portmgr (self)
* BROKEN on 5.x: Does not installKris Kennaway2004-09-191-0/+4
| | | | Approved by: portmgr (self)
* Unbreak the build on 5.X and -CURRENT.Alexey Dokuchaev2004-09-181-0/+44
| | | | | Reported by: pointyhat.freebsd.org Approved by: portmgr (marcus), fjoe (mentor, implicit)
* BROKEN on 5.x: Does not compileKris Kennaway2004-09-181-1/+7
| | | | Approved by: portmgr (self)
* - add missing MAN1 and MAN3Yen-Ming Lee2004-09-042-357/+537
| | | | | | | | | - apply DATADIR, EXAMPLESDIR, and DOCSDIR in PLIST - update the usage of NOPORTDOCS PR: 71322 Submitted by: leeym Approved by: Fernan Aguero <fernan@iib.unsam.edu.ar>
* - Unbreak by upgrading to 4.2;Thierry Thomas2004-08-204-444/+387
| | | | | | | | - Use DIST_SUBDIR because tarball is not versioned; - Add sysdate to PORTVERSION to handle minor revisions; - Do some cleaning.
* biology/lsysexp is not brokenEdwin Groothuis2004-08-181-3/+5
| | | | | | | fix gtk build error PR: ports/70598 Submitted by: David Yeske <dyeske@yahoo.com>
* This is now buildable on 5.x, remove BROKEN.Kris Kennaway2004-08-171-7/+1
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* After devel/p5-File-Temp has gained an IGNORE for PERL_LEVEL > 500800, allMathieu Arnold2004-08-121-1/+3
| | | | | these ports were broken because they always depended on it. I've rearranged all the dependencies to fit the new scheme.
* - Update to 5.2Pav Lucistnik2004-07-312-3/+13
| | | | | PR: ports/69799 Submitted by: Jan Lentfer <Jan.Lentfer@web.de> (maintainer)
* Use X_IMAKE_PORT instead of dist-specific imake dependencies. While here,Eric Anholt2004-07-241-6/+3
| | | | make the BROKEN message a little more informative.
* Update to version 2.7.2.1.1Kirill Ponomarev2004-07-105-42/+35
| | | | | PR: ports/68861 Submitted by: Ports Fury
* Apply a big libtool patch to allow porters to use the libtool installed byJoe Marcus Clarke2004-07-101-1/+1
| | | | | | | | | | | | | | | | | | | | | | | | | | | the libtoolX ports instead of the one included with each port. Ports that set USE_LIBTOOL_VER=X will now use the ports version of libtool instead of the included version. To restore previous behavior, use the new macro, USE_INC_LIBTOOL_VER. Both macros accept the same argument: a libtool version. For example, to use the ports version of libtool-1.5, add the following to your Makefile: USE_LIBTOOL_VER= 15 To use the included version of libtool with extra hacks provided by libtool-1.5, add the following to your Makefile: USE_INC_LIBTOOL_VER= 15 With this change, ports that had to add additional libtool hacks to prevent .la files from being installed or to fix certain threading issues can now delete those hacks (after appropriate testing, of course). PR: 63944 Based on work by:eik and marcus Approved by: ade (autotools maintainer) Tested by: kris on pointyhat Bound to be hidden problems: You bet
* Fix distsiteVolker Stolz2004-07-061-2/+1
| | | | | | PR: ports/67473 Submitted by: Roman Neuhauser Approved by: maintainer timeout
* BROKEN: Checksum mismatchKris Kennaway2004-07-031-0/+2
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* Update to 4.6Volker Stolz2004-07-027-51/+58
| | | | | PR: ports/68561 Submitted by: maintainer
* BROKEN: Does not buildKris Kennaway2004-07-021-0/+2
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* Update to fix fetch. Rework PORTVERSION to be more like biology/fasta3Mark Linimon2004-07-014-9/+11
| | | | | | | | and pacify portlint. PR: ports/67428 Submitted by: Roman Neuhauser <neuhauser at chello dot cz> Approved by: maintainer timeout (one month)
* Chase mastersite and fix checksum to unbreak. (Changes are inclusion of aMark Linimon2004-07-012-8/+4
| | | | | | | | | logfile, one Linux-only change, and one change in a test script). Assign submitter as new maintainer as current one has not responded to PRs for some time. PR: ports/68199 Submitted by: Fernan Aguero <fernan at iib dot unsam dot edu dot ar>
* Update to 1.7.6.1.Mark Linimon2004-06-304-11/+43
| | | | | | PR: ports/67429 Submitted by: Roman Neuhauser <neuhauser at chello dot cz> Approved by: maintainer timeout (4 weeks)
* Drop maintainershipMario Sergio Fujikawa Ferreira2004-06-241-1/+1
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* Fix MASTER_SITES:Volker Stolz2004-06-231-2/+2
| | | | | | | | | - add trailing slash - ftp.ebi.ac.uk only has 2.8.0 PR: ports/67427 Submitted by: Roman Neuhauser Approved by: maintainer timeout
* Add ariadne 1.3, programs to compare protein sequences andKirill Ponomarev2004-06-225-0/+60
| | | | | | | profiles, using the Smith-Waterman algorithm. PR: ports/67811 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar>
* Set an expiry date of 2004-08-20 for these BROKEN/IGNORE/FORBIDDENKris Kennaway2004-06-222-1/+5
| | | | | ports. They will be removed on or after that date if they are still broken and no fix has been submitted to GNATS.
* BROKEN: Checksum mismatchKris Kennaway2004-06-201-0/+2
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* Replace explicit imake dependency with USE_IMAKE=yesEric Anholt2004-06-181-5/+1
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* Update to 20040613 releaseMario Sergio Fujikawa Ferreira2004-06-132-3/+3
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* - Remove obsolete MASTER_SITESKirill Ponomarev2004-06-081-2/+1
| | | | | PR: ports/67690 Submitted by: Roman Neuhauser <neuhauser@chello.cz>
* - Update MASTER_SITESPav Lucistnik2004-06-021-3/+3
| | | | | PR: ports/67472 Submitted by: Roman Neuhauser <neuhauser@chello.cz>
* [PATCH] biology/mopac patchsite fixEdwin Groothuis2004-06-011-1/+1
| | | | | | | | | | | | this is a followup to ports/67432 I completely overlooked the fact that the port was setting PATCH_SITES, here's a fix for that maintainer cc'd PR: ports/67441 Submitted by: Roman Neuhauser <neuhauser@chello.cz>
* [PATCH] biology/mopac distsite fixEdwin Groothuis2004-06-011-1/+1
| | | | | | | connection refused (portsurvey reports timeouts) PR: ports/67432 Submitted by: Roman Neuhauser <neuhauser@chello.cz>
* [PATCH] biology/gff2ps distsite fixEdwin Groothuis2004-06-011-3/+3
| | | | | | | couple distfiles with their respective urls to reduce time and traffic PR: ports/67430 Submitted by: Roman Neuhauser <neuhauser@chello.cz>
* - Update WWWPav Lucistnik2004-05-301-1/+1
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* - Fix MASTER_SITESKirill Ponomarev2004-05-231-4/+1
| | | | | PR: ports/67045 Submitted by: Stefan Walter <sw@gegenunendlich.de>
* - Remove long time unresponsive MASTER_SITEPav Lucistnik2004-05-221-1/+0
| | | | | PR: ports/67016 Submitted by: Roman Neuhauser <neuhauser@chello.cz>
* - Update MASTER_SITES and WWW: lineKirill Ponomarev2004-05-222-2/+2
| | | | | PR: ports/67015 Submitted by: Roman Neuhauser <neuhauser@chello.cz>
* Add forgotten patches...Thierry Thomas2004-05-214-2/+62
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* BROKEN: Broken pkg-plistKris Kennaway2004-05-211-0/+2
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* unbreak, only minor changes in the distfiles (see PR)Oliver Eikemeier2004-05-182-8/+7
| | | | | | | | Since the distfile has no version number, put it in DIST_SUBDIR= ${PORTNAME}-${PORTVERSION} PR: 66817 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (new maintainer)
* Add a missing BUILD_DEPENDS.Thierry Thomas2004-05-111-0/+1
| | | | Reported by: Kris.
* Upgrade to 2.0b7 and unbreak.Thierry Thomas2004-05-117-113/+128
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* Fix MASTER_SITESMarkus Brueffer2004-05-091-1/+1
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* Make portlint happy by replacing space to tabMaho Nakata2004-05-072-4/+4
| | | | | PR: 65409 Submitted by: trevor
* - update to 4.5.3Pete Fritchman2004-05-026-17/+235
| | | | | | | - remove version from pkg-descr PR: 65972 Submitted by: maintainer
* - Honor CFLAGSKirill Ponomarev2004-04-161-1/+1
| | | | | PR: ports/65599 Submitted by: michael johnson <ahze at ahze dot net>
* BROKEN: Checksum mismatchKris Kennaway2004-04-121-0/+2
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* Mark this port BROKEN with gtk+-2.4.Joe Marcus Clarke2004-04-111-0/+2
| | | | Reported by: bento via kris
* Tidy up whitespace.Trevor Johnson2004-04-112-6/+6
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* Trim whitespace.Trevor Johnson2004-04-112-66/+66
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* Add openbabel dependency (bento log forwarded by kris).Trevor Johnson2004-04-091-0/+2
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* Update to 1.7.8.Trevor Johnson2004-04-083-16/+16
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* After patching, remove the carriage-return characters from povchem.cTrevor Johnson2004-04-071-0/+2
| | | | | | because they because they choke GCC 2.95.4. noticed by: kris
* Chase home page.Trevor Johnson2004-04-071-1/+1
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* Fix build with gtk 2.4.Adam Weinberger2004-04-051-1/+6
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* Chase the glib20 update, and bump all affected ports' PORTREVISIONs.Joe Marcus Clarke2004-04-054-3/+4
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* Remove category pkg/COMMENT files in favour of a COMMENT variable in theKris Kennaway2004-04-022-1/+2
| | | | | | | category makefile. Submitted by: Matthew Seaman <m.seaman@infracaninophile.co.uk> PR: 59651
* SIZEify (maintainer timeout)Trevor Johnson2004-03-3134-0/+38
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* Add SIZE data.Akinori MUSHA2004-03-221-0/+1
| | | | Submitted by: trevor
* Do not hardcord PICFLAGMaho Nakata2004-03-201-7/+1
| | | | Submitted by: ru
* Backout previous change of PICFLAG, sinceMaho Nakata2004-03-191-0/+6
| | | | | | | | | | | | | | | | | | | | | | | | | | | | behaviour of -fPIC and -fpic are different. Here is the comment form obrien: -- "-fpic" is a [minor?] optimization for machines that can handle it: -fpic Generate position-independent code (PIC) suitable for use in a shared library, if supported for the target machine. Such code accesses all constant addresses through a global offset table (GOT). The dynamic loader resolves the GOT entries when the program starts (the dynamic loader is not part of GCC; it is part of the operating system). If the GOT size for the linked executable exceeds a machine-specific maximum size, you get an error message from the linker indicating that -fpic does not work; in that case, recompile with -fPIC instead. (These maximums are 16k on the m88k, 8k on the SPARC, and 32k on the m68k and RS/6000. The 386 has no such limit.) -fPIC If supported for the target machine, emit position-independent code, suitable for dynamic linking and avoiding any limit on the size of the global offset table. This option makes a difference on the m68k, m88k, and the SPARC. Thanks to: obrien
* -fPIC is appropreate on all architectures.Maho Nakata2004-03-191-6/+0
| | | | Submitted by: kris
* Add size data, approved by maintainers.Trevor Johnson2004-03-191-0/+1
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* 1) Silent version up without changing the version numberMaho Nakata2004-03-183-6/+6
| | | | | | | | very minor change in README 2) change WWW: section at pkg-descr 3) SIZEify Submitted by: kris via bento
* Add size data.Trevor Johnson2004-03-181-0/+1
| | | | Approved by: maintainers
* SIZEify.Trevor Johnson2004-03-182-0/+2
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* 1) update to 0.9.3Maho Nakata2004-03-175-11/+44
| | | | | | 2) honor PREFIX & LOCALBASE 3) SIZEify 4) possible fix for amd64 and ia64
* Whoa there, boy, that's a mighty big commit y'all have there...Ade Lovett2004-03-141-1/+1
| | | | | | | | | | | | | | | Begin autotools sanitization sequence by requiring ports to explicitly specify which version of {libtool,autoconf,automake} they need, erasing the concept of a "system default". For ports-in-waiting: USE_LIBTOOL=YES -> USE_LIBTOOL_VER=13 USE_AUTOCONF=YES -> USE_AUTOCONF_VER=213 USE_AUTOMAKE=YES -> USE_AUTOMAKE_VER=14 Ports attempting to use the old style system after June 1st 2004 will be sorely disappointed.
* - Update to version 2003.09.21Kirill Ponomarev2004-03-124-15/+9
| | | | | PR: ports/64160 Submitted by: Liam J. Foy <liamfoy@sepulcrum.org>
* Insert "-l" into PATCH_ARGS, to cause the "patch" command to ignoreTrevor Johnson2004-03-091-0/+1
| | | | | carriage-return characters in povchem.c which otherwise cause patch-ab to fail to apply.
* Add MD5 of 2004-01-06 version of povchem.c. Its contents areTrevor Johnson2004-03-091-1/+1
| | | | | identical to the 1999-08-22 version, except that the new file has a carriage return character added at the end of each line, DOS-style.
* Unmark as broken for 4.x; instead, mark as ignore for perl < 5.6.Mark Linimon2004-03-081-2/+2
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* BROKEN on amd64 and ia64: Does not compile (missing -fPIC)Kris Kennaway2004-03-071-1/+7
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* Maintainer reports being unable to look after this port any longer.Mark Linimon2004-03-071-1/+1
| | | | Thanks for your efforts in the past.
* - Update to version 0.4Kirill Ponomarev2004-02-282-3/+3
| | | | | PR: ports/63478 Submitted by: maintainer
* - Fix MASTER_SITESKirill Ponomarev2004-02-281-1/+1
| | | | | PR: ports/63469 Submitted by: maintainer
* Update to 20040226 releaseMario Sergio Fujikawa Ferreira2004-02-273-3/+10
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* BROKEN on alpha: Does not compileKris Kennaway2004-02-231-1/+7
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* BROKEN on alpha 5.x: does not compileKris Kennaway2004-02-231-1/+7
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* BROKEN: Checksum mismatchKris Kennaway2004-02-221-0/+2
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* BROKEN on 4.x: Configure failsKris Kennaway2004-02-221-1/+7
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* BROKEN: Does not fetchKris Kennaway2004-02-221-0/+2
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* BROKEN: Checksum mismatchKris Kennaway2004-02-221-0/+2
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* Upgrade to 1.23.Dag-Erling Smørgrav2004-02-106-1001/+1125
| | | | Approved by: maintainer timeout
* USE_SIZEifyMario Sergio Fujikawa Ferreira2004-02-082-0/+2
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* Correct whitespace in COMMENTKris Kennaway2004-02-071-1/+1
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* Use PLIST_FILES (bento-tested, marcus-reviewed).Trevor Johnson2004-02-0610-5/+5
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* Use PLIST_FILES.Trevor Johnson2004-02-062-1/+1
| | | | Reviewed by: marcus
* Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.Joe Marcus Clarke2004-02-0417-5/+17
| | | | (Part 2)
* - Fix build on AMD64Kirill Ponomarev2004-02-022-2/+41
| | | | - Use DOCSDIR
* - Update to 3.6.bPav Lucistnik2004-02-012-4/+3
| | | | | PR: ports/62142 Submitted by: David A. Bader <dbader@ece.unm.edu> (maintainer)
* - Update to version 2003.11.25Kirill Ponomarev2004-01-292-2/+2
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* Add SIZE.Trevor Johnson2004-01-289-0/+11
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* Yet another C++ fix.Christian Weisgerber2004-01-261-1/+9
| | | | Reported by: kris (bento)
* Use the CPIO macro defined in bsd.port.mk.Trevor Johnson2004-01-221-1/+1
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* Major update from 0.7.2 to 1.4 by new maintainer. This is almost a completeMark Linimon2004-01-216-405/+1689
| | | | | | | | | | | | | | | | | | | | rework of the port. See the page http://news.open-bio.org/archives/cat_bioperl.html for the changes between 1.2 and 1.4. The older changes are in the CVS tree. From the new maintainer: Note that this new port just handles the installation of bioperl and not of additional extra stuff (bioperl-gui, bioperl-corba-server, bioperl-corba-client). This is unlike the behaviour of the current port. The extra stuff, though still functional, had very little adoption among users, and does not appear to be currently supported/maintained. PR: ports/47303 (and subsequent) Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (new maintainer)
* silent updates of archives:Maho Nakata2003-12-283-4/+8
| | | | | | | | | a) program: Draw the hydrophobicity function F5 b) documentation: add very minor description not related FreeBSD. 1) bump portrevision 2) several clean ups for Makefile
* - Fix MASTER_SITESKirill Ponomarev2003-12-201-1/+1
| | | | | PR: 60417 Submitted by: maintainer
* Mark as broken on 5.x due to the usual gcc terminating-character hassles.Mark Linimon2003-12-191-1/+7
| | | | Notified mainatainer.
* - Update to last snapshotPav Lucistnik2003-12-072-9/+6
| | | | | PR: ports/58511 (based on) Submitted by: Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> (maintainer)
* - Update checksum again, seems author removes .ps version of documentationPav Lucistnik2003-11-224-467/+31
| | | | | | | from tarball - Unmark broken, it builds for me just fine Approved by: adamw (mentor)
* Define USE_PERL5_BUILD, not erroneous USE_PERL.Trevor Johnson2003-11-202-2/+2
| | | | Submitted by: Oliver Eikemeier
* Define USE_PERL to make Perl available for (mostly deprecated)Trevor Johnson2003-11-202-0/+2
| | | | "perl -pi -e" construction.
* - Unbreak on 5.xPav Lucistnik2003-11-203-7/+54
| | | | Approved by: adamw (mentor)
* - Update to new version 2003.11.17Kirill Ponomarev2003-11-176-66/+17
| | | | - Unbreak this port
* unPERLify by using REINPLACE_CMD and SED where appropriate.Joe Marcus Clarke2003-11-162-3/+1
| | | | | PR: 47654 Submitted by: Simon 'portlint' Schubert <corecode@corecode.ath.cx>
* Switch to wxgtk2.Max Khon2003-11-141-1/+2
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* Use the FIND and XARGS macros introduced in bsd.port.mk 1.391.Trevor Johnson2003-11-133-3/+3
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* Remove my e-mail address from comment blocks of portsTrevor Johnson2003-11-131-1/+1
| | | | I have contributed, in hopes of attracting less spam.
* wxgtk-devel -> wxgtkMax Khon2003-11-101-1/+2
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* - Switch to wxgtk2Max Khon2003-11-101-7/+9
| | | | - USE_MESA -> USE_GL
* LIB_DEPENDS on libglut for libglut rather than soon-to-disappear Mesa3.Eric Anholt2003-11-081-1/+1
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* Update to 2.0.7.Adam Weinberger2003-11-083-4/+7
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* Mark BROKEN: distfile has changed.Eric Anholt2003-11-071-0/+2
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* ${MASTER_SITES} are slow. This patch adds a mirror site to helpJames E. Housley2003-11-061-1/+2
| | | | | | | | fetch work more frequently. This patch patches the Makefile from PORTSDIR}/biology PR: 58130 Submitted by: MAINTAINER
* Make this port use wxgtk 2.4.2.Max Khon2003-11-053-7/+19
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* Chase wxgtk library name (and version) change.Max Khon2003-11-051-1/+1
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* Pet portlint.Mark Linimon2003-11-041-1/+1
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* Date: Tue, 04 Nov 2003 00:42:55 +0900Edwin Groothuis2003-11-041-1/+1
| | | | | | | | | | | | | | | | From: Motomichi Matsuzaki <mzaki@e-mail.ne.jp> Subject: Re: question about FreeBSD ports you maintain Briefly, I have no time for maintaining ports. So I wish to leave the maintainer position of these ports: biology/fastdnaml textproc/wv Thanks you for maintaining the FreeBSD system. Best regards, Motomichi Matsuzaki
* Mark BROKEN (see bento logs). These ports are scheduled for removalKris Kennaway2003-11-031-1/+1
| | | | | after Feb 2 2004 if they are still broken at that time and no fixes have been submitted by PR.
* ports with possibly unreachable MAINTAINERsEdwin Groothuis2003-11-022-2/+2
| | | | | | | *** addresses that seem to be dead: PR: ports/58694 Submitted by: Oliver Eikemeier <eikemeier@fillmore-labs.com>
* Chased new mastersite per distfile survey. Notified maintainer.Mark Linimon2003-10-261-1/+1
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* utilize SITE_PERLYing-Chieh Liao2003-10-244-387/+385
| | | | | PR: 58166 Submitted by: Cheng-Lung Sung <clsung@dragon2.net>
* Respect CC and CFLAGSKris Kennaway2003-10-231-5/+11
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* Cosmetic fix: use %%DOCSDIR%% macro.Sergey A. Osokin2003-10-2231-1259/+1259
| | | | | | | No functionally changes. Submitted by: Oleg Karachevtsev <ok@etrust.ru> A part of PR: 57992
* - Update to 0.5.2Kirill Ponomarev2003-10-213-297/+298
| | | | | PR: 58304 Submitted by: Clement Laforet <sheepkiller@cultdeadsheep.org>
* Don't remove share/java/classes system directory.Kris Kennaway2003-10-191-1/+0
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* Fixes the checksum problem, but doesn't fix the port; adds a BROKENMark Linimon2003-10-162-2/+3
| | | | | | | line about how it fails. Some other interested person will have to take it from here. PR: 56882
* Update to 0.5.3.Akinori MUSHA2003-10-153-2/+4
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* update biology/nab: 4.5.1 -> 4.5.2Daichi GOTO2003-10-145-20/+38
| | | | | PR: 57970 Submitted by: M. L. Dodson <bdodson@scms.utmb.edu> (maintainer)
* BROKEN: Broken pkg-plistKris Kennaway2003-10-131-0/+2
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* BROKEN: Does not fetchKris Kennaway2003-10-131-0/+2
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* Port update (maintainer): biology/wiseEdwin Groothuis2003-09-242-2/+2
| | | | | | | | | Fenner's porsurvey show wise no longer available at original site. Original site readme shows it has moved so update the MASTER_SITES accordingly. PR: ports/57154 Submmited by: Tony Maher <tonymaher@optushome.com.au>
* Make portlint(1) happy by changing strip to ${STRIP_CMD}Sergey A. Osokin2003-09-242-2/+2
| | | | | Submitted by: Oleg Karachevtsev <ok@etrust.ru> PR: 56998
* Update port: biology/gperiodic to 2.0.6Edwin Groothuis2003-09-083-4/+5
| | | | | | | - Update to version 2.0.6 PR: ports/56522 Submitted by: KATO Tsuguru <tkato@prontomail.com>
* new port:biology/lsysexpEdwin Groothuis2003-09-035-0/+71
| | | | | | | | | | | | | | | | | | L-system Explorer is a program used for viewing and creating L-system fractals. The following features are supported: - Over 500 builtin L-systems, arranged into about 20 groups. - Ability to create and save custom L-systems and L-system groups. - Abilty to save images of L-systems (in PNG or JPEG format). - Multiple L-systems can be viewed at the same time. - Able to use custom colors and gradients. - Can also generate random gradients, or completely random colors. - Able to draw using lines, points, or a random combination of both. PR: iports/51400 Submitted by: David Yeske <dyeske@yahoo.com>
* Silent changes to the port distfile which *not* have significantMaho Nakata2003-09-021-2/+2
| | | | | | | | functional differences. just changing very minor change of documatation, adding very minor functionality and some cleanup for coding Submitted by: bento's log
* - Add an end-of-string to each line of the inputKirill Ponomarev2003-08-281-7/+7
| | | | | | | when parsing the input files PR: 56043 Submitted by: maintainer
* Update to 0.5.2.Akinori MUSHA2003-08-233-2/+13
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* Fix build on python2.3Hye-Shik Chang2003-08-201-1/+6
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* o Main modificationNorikatsu Shigemura2003-08-192-9/+7
| | | | | | | | | | | | | | | | | | graphics/gd(based on 1.8.4) -> graphics/gd1 graphics/gd2(based on 2.0.15) -> graphics/gd graphics/p5-GD(based on 1.41) -> graphics/p5-GD1 graphics/p5-GD2(based on 2.07) -> graphics/p5-GD japanese/gd -> japanese/gd1 japanese/gd2 -> japanese/gd o Include some feature WITH_XPM(w/, w/o WITHOUT_X11) o Chase this modification o Fix build error [1] PR: ports/54540 Submitted by: Ports Fury Approved by: maintainer (blanket) Reported by: bento via kris [1]
* As announced on May 6, remove the broken p5-bioperl-devel port.Kris Kennaway2003-08-088-686/+0
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* BROKEN: Checksum mismatchKris Kennaway2003-08-071-0/+2
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* Fix python version detection routines to cope with python 2.3'sHye-Shik Chang2003-08-021-1/+1
| | | | boolean representation.
* Somehow pkg-plist is removed...Maho Nakata2003-08-011-0/+128
| | | | Pointy hat to: myself
* a) Update to 1.7.3Maho Nakata2003-08-013-84/+18
| | | | | | | | | b) Maintainer timeout: This PR is submitted by Thu May 08 07:30:18 PDT 2003 but no reply from the maintainer. PR: 51971 Submitted by: KATO Tsuguru <tkato@prontomail.com> aka Ports Fury
* Add USE_XLIB=yes to compileMaho Nakata2003-07-311-0/+1
| | | | Submitted by: kris via bento
* Update to 0.5.1.Akinori MUSHA2003-07-292-2/+2
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* A new port garlic, free molecular viewer and editor, free molecularMaho Nakata2003-07-286-0/+399
| | | | | visualization program, protein structure, DNA structure, PDB, molecular rendering, biological macromolecule.
* - Update to version 2.0.5Kirill Ponomarev2003-07-285-41/+25
| | | | | | PR: 54899 Submitted by: KATO Tsuguru <tkato@prontomail.com> Approved by: fjoe (mentor) (implicit)
* Some clean-up.Maho Nakata2003-07-261-17/+14
| | | | | | a) ECHO-> ECHO_CMD b) place of WITH_OPTIMIZED_FLAGS seems to be wrong. c) fix errors reported from freshports.org
* Duplicated the `pre-extract:' and `post-build:'Maho Nakata2003-07-261-9/+0
| | | | | Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov> Pointy hat to: myself
* a) Some corrupts with Makefile and pkg-plist.Maho Nakata2003-07-252-12/+26
| | | | | | | b) forgot to notice that drop maintainership to ports@ Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov> Pointy hat to: myself
* a) Forgot to update distinfo 52498Maho Nakata2003-07-255-33/+69
| | | | | | | | | b) added LEGAL. author requests no distribution except from his FTP site c) clean-ups for compiler optimization Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov> Pointy hat to: maho; partially :)
* Update to 0.90Maho Nakata2003-07-244-309/+328
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* enhancement, build and install the opengl viewer, moldenogl.Maho Nakata2003-07-194-74/+64
| | | | | | | | | | update to 3.9, not 3.8, which is newer :) Committed by maintainer timeout: > Sat Apr 5 17:46:57 EST 2003 - edwin - informed maintainer PR: 47177 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
* honor CFLAGS and FFLAGSMaho Nakata2003-07-192-3/+4
| | | | | PR: 54396 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
* Maintainer update of biology/tinker port to version 4.0.Maho Nakata2003-07-195-20/+42
| | | | | PR: 52498 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
* Add semi-colons(;) after declare statements that go in the povray scene fileYen-Ming Lee2003-07-143-7/+168
| | | | | | | | | | | | | so that povchem works with povray-3.5. Maintainer prefer not to depend on ImageMagick since users can use their favorite picture viewer. display isn't the only one choice. Drop maintainership. PR: 54397 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov> Reviewed by: Chen-hsiung Chan <frankch@waru.life.nthu.edu.tw>
* o Change library name from libgd to libgd1.Norikatsu Shigemura2003-07-122-3/+4
| | | | | | | | | o Do not install everything except headers and libraries (to avoid conflicting with graphics/gd2) o Fix dependency on new libgd1(for many ports). PR: ports/54100 Submitted by: Ports Fury
* s/NOPORTSDOCS/NOPORTDOCS/ [1]Sergey A. Osokin2003-07-112-6/+6
| | | | | | | Use %%PORTDOCS%%%%DOCSDIR%% in pkg-plist. PR: 53911 [1] Approved by: maintainer
* update biology/nab: 4.4 -> 4.5.1Daichi GOTO2003-07-0812-403/+393
| | | | | PR: 52786 Submitted by: M. L. Dodson <bdodson@scms.utmb.EDU> (maintainer)
* Update to 0.5.0.Akinori MUSHA2003-06-263-5/+25
|
* update ports/biology/act to latest release (v2)Daichi GOTO2003-06-233-988/+1603
| | | | | PR: 49093 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar>
* - update to 1.83Erwin Lansing2003-06-183-3/+4
| | | | | | | | | - give maintainership to submitter as the old maintainer's address bounces PR: 52054 Submitted by: Philip M. Gollucci <philip@p6m7g8.com> Approved by: maintainer bounces
* Move inclusion of bsd.port.pre.mk later in the file for conditional BROKENKris Kennaway2003-06-051-5/+5
| | | | | | | tag. Early inclusion caused problems for some ports, so to be safe I'm updating all of them. Pointy hat to: kris
* Assign MAINTAINER to ports@FreeBSD.org.Adam Weinberger2003-06-051-1/+1
| | | | | PR: ports/52534 Submitted by: Christian Brueffer <chris@unixpages.org>
* Upgrade to 2003.01.21. Appears to only add some more file export/printTim Vanderhoek2003-05-227-40/+49
| | | | | | options. Additional patches were necessary since the fltk port seems to have been upgraded and thus also broken this port (which would been already broken due to the checksum failure).
* Add back the WWW which was inexplicably deleted in a previousTim Vanderhoek2003-05-221-6/+11
| | | | | | revision. Make a few organisational improvements. However, be too lazy to move to pkg-message a note that really shouldn't be necessary for the end user at all.
* - fix build under gcc 3.3Pete Fritchman2003-05-191-1/+8
| | | | | | | - respect CC/CFLAGS PR: 52013 Submitted by: maintainer
* Back out previous commit, the port was fixed a few days ago.Kris Kennaway2003-05-191-7/+1
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* BROKEN on 5.1: bad C++Kris Kennaway2003-05-182-2/+14
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* - Update to latest release.Michael Landin2003-05-145-62/+3
| | | | | | | | | - Better autoconf/automake so patches no longer needed - Changed dependency. (now wxgtk-devel) PR: 51741 Submitted by: maintainer Approved by: roberto(mentor)
* BROKEN: Broken pkg-plistKris Kennaway2003-05-071-0/+2
|
* Update to 2003.04.21Tilman Keskinoz2003-05-058-79/+59
| | | | | PR: 51709 Submitted by: Tony Maher <tonymaher@optushome.com.au>
* - unbreak on 4.x: add dependency on gdkpixbuf, fix Makefiles to compile withPete Fritchman2003-05-043-44/+30
| | | | | | | | the correct libraries - add a WITH_OPTIMIZED_CFLAGS knob PR: 51614 Submitted by: maintainer
* Updated to 0.8.6.Maho Nakata2003-05-035-362/+283
| | | | | Submitted by: M. L. Dodson <bdodson@scms.utmb.EDU> Pkg-plist by: maho
* Update to 20030425 snapshotMario Sergio Fujikawa Ferreira2003-04-263-6/+6
|
* Remove USE_GNOMENG.Joe Marcus Clarke2003-04-183-3/+0
|
* Update the biology/tinker Makefile so it builds on -currentEdwin Groothuis2003-03-301-1/+6
| | | | | PR: ports/50371 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
* * Fix build with GCC3 (-CURRENT).Christian Weisgerber2003-03-255-24/+89
| | | | | | | * Honor CXX/CXXFLAGS. * Use predefined DOCSDIR and EXAMPLESDIR variables. Approved by: maintainer timeout
* Clear moonlight beckons.Ade Lovett2003-03-0728-14/+14
| | | | | | | Requiem mors pacem pkg-comment, And be calm ports tree. E Nomini Patri, E Fili, E Spiritu Sancti.
* Retire comment file.Trevor Johnson2003-03-012-1/+1
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* Update to 20030227 snapshotMario Sergio Fujikawa Ferreira2003-02-282-2/+2
|
* De-pkg-commentMario Sergio Fujikawa Ferreira2003-02-242-1/+1
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* De-pkg-comment.Akinori MUSHA2003-02-2172-36/+36
|
* De-pkg-comment.Akinori MUSHA2003-02-218-4/+4
|
* Fix install and packaging list.Christian Weisgerber2003-02-183-59/+67
| | | | Reported by: kris
* De-pkg-comment.Akinori MUSHA2003-02-182-1/+1
|
* Update to 1.83.Christian Weisgerber2003-02-1613-182/+179
| | | | | PR: 48264 Submitted by: David A. Bader <dbader@eece.unm.edu>
* * Update to 3.13.Christian Weisgerber2003-02-155-20/+7
| | | | | | | PR: 48255 Submitted by: David A. Bader <dbader@eece.unm.edu> * Also honor CC/CFLAGS.
* Add dependency on security/p5-Digest-MD5Edwin Groothuis2003-02-131-0/+3
| | | | Noticed on: bento
* Update to version 0.5.1.Christian Weisgerber2003-02-128-68/+4
| | | | | PR: 48047 Submitted by: Ports Fury
* Remove gaussian98Kris Kennaway2003-02-051-1/+0
| | | | Pointy hat to: maho
* Delete biology/gaussian98. Maintain is too hard andMaho Nakata2003-02-0111-820/+0
| | | | gray in license
* Update to 0.4.0.Akinori MUSHA2003-01-293-14/+26
|
* add '-f' argument to rm so that the script always work even if aMario Sergio Fujikawa Ferreira2003-01-241-1/+1
| | | | | | file is not there Submitted by: Frerich Raabe <frerich.raabe@gmx.de>
* New Port: biology/actEdwin Groothuis2003-01-166-0/+1031
| | | | | PR: ports/35753 Submitted by: Camson Huynh <chuynh@biolateral.com.au>
* Add missing fileKris Kennaway2003-01-141-0/+1
|
* Add some missing filesKris Kennaway2003-01-141-0/+4
|
* Update to 3.8Tilman Keskinoz2003-01-083-22/+6
| | | | Approved by: rmiya@cc.hirosaki-u.ac.jp (maintainer)
* update biology/babel to properly output mm3 files.Edwin Groothuis2003-01-032-1/+93
| | | | | PR: ports/42425 Submitted by: Glenn Johnson <glennpj@charter.net>
* upgrade to 3.7Ying-Chieh Liao2003-01-025-193/+255
| | | | | PR: 44957 Submitted by: maintainer
* add missing includeYing-Chieh Liao2002-12-291-0/+10
| | | | | PR: 46584 Submitted by: Ports Fury
* fix build on -currentYing-Chieh Liao2002-12-225-0/+53
| | | | | PR: 46459 Submitted by: Ports Fury
* Fix typo: distribfold.org -> distributedfolding.orgMario Sergio Fujikawa Ferreira2002-12-202-2/+2
| | | | Submitted by: Matt Mills <alpha@vanity.com>
* o Update to 20021105 snapshotMario Sergio Fujikawa Ferreira2002-12-192-4/+9
| | | | | | | | | | o Depend on compat4x on OSVERSION >= 500000 since these are 4.5-RELEASE binaries o House a copy under MASTER_SITE_LOCAL: the local copy will be versioned, developer has yet to be convinced of the advantages of distributing versioned files Approved by: portmgr (knu)
* Mark BROKEN due to "Unknown problem"Mario Sergio Fujikawa Ferreira2002-11-251-0/+2
| | | | Submitted by: maintainer
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