| Commit message (Collapse) | Author | Age | Files | Lines |
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Reported by: krismail
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PR: 96995
Submitted by: Martin Wilke <freebsd___unixfreunde.de>
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PR: ports/96949
Submitted by: Martin Wilke <freebsd@unixfreunde.de>
Approved by: maintainer
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PR: ports/96907
Submitted by: Joerg Pulz <Joerg.Pulz@frm2.tum.de>
Approved by: Quincey Koziol <koziol@ncsa.uiuc.edu> (maintainer)
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Submitted by: Pedro F. Giffuni <giffunip (at) asme.org> (maintainer)
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- portlint(1)
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- Bump portrevision.
Approved by: maintainer via email, mnag (mentor).
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MINC (Medical Imaging NetCDF) is a medical imaging data format and an
associated set of tools and libraries. MINC was created in 1993 by Peter
Neelin at the McConnell Brain Imaging Centre of the Montreal Neurological
Institute. Many others have contributed to the design and implementation
MINC over the years.
PR: ports/93495
Submitted by: Jason Bacon <bacon (at) smithers.neuro.mcw.edu>
Repocopied by: marcus
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Reported by: kris
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Reported by: ports-amd64 via Kris
Seen with: Pedro F. Giffuni <giffunip (at) asme.org> (maintainer)
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Submitted by: maintainer
Reported by: ports-i386 via Kris
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- pkg-plist fixed
PR: 96331
Submitted by: Martin Wilke <freebsd@unixfreunde.de>
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The function of ElmerPost is to visualize the numerical results produced
by ElmerSolver and other finite element programs. ElmerPost operates with
the data specific to the unknown variables (temperature, velocity,
pressure, displacement etc.) defined in the mathematical model. ElmerPost
plots e.g. contours and vector fields, and can manipulate computed data
into another form using the built-in MATC-language (for instance heat
fluxes from temperature distributions).
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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ElmerFront is a tool for initializing the computational process in Elmer.
It communicates with external software producing geometrical data, i.e.,
CAD files and computational meshes. ElmerFront generates its own finite
element meshes, allows the user to build mathematical models graphically,
and finally produces input data for ElmerSolver.
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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ElmerSolver is thus an independent module that processes the computational
mesh and the model input file containing references to the selected
equations and model parameters. ElmerSolver makes the equations into a
discrete form, handles coupled systems, non-linearities and
time-dependences, and provides output data for visualization.
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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Elmer is an open-source computational tool for multi-physics problems.
Elmer includes physical models of fluid dynamics, structural mechanics,
electromagnetics and heat transfer. These are described by partial
differential equations which Elmer solves by the Finite Element Method (FEM).
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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Elmer is an open-source computational tool for multi-physics problems.
Elmer includes physical models of fluid dynamics, structural mechanics,
electromagnetics and heat transfer. These are described by partial
differential equations which Elmer solves by the Finite Element Method (FEM)
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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extruded and rotated 3D geometries. ElmerGrid is independent but fully
supports ElmerSolver and ElmerPost. It may be used to create linear,
quadratic and cubic triangles and rectangles. It has also versatile
capabilities in mesh manipulation.
ElmerGrid may also be used in grid manipulation. ElmerGrid may, for
example, be used to transfer different mesh formats to that understood by
ElmerSolver or ElmerPost. ElmerGrid also includes mesh partitioning
routines that have been optimized for ElmerSolver. The partitioning may be
done by METIS or by a simple geometric division.
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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Elmer is an open-source computational tool for multi-physics problems.
Elmer includes physical models of fluid dynamics, structural mechanics,
electromagnetics and heat transfer. These are described by partial
differential equations which Elmer solves by the Finite Element Method (FEM)
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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several libraries built inside of VTK with system versions.
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Submitted by: Pedro F. Giffuni <giffunip (at) yahoo.com>
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PR: ports/96010
Submitted by: Ports Fury
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- USE_REINPLACE is not needed any more
PR: 95849
Submitted by: Rong-En Fan (maintainer)
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PR: 94302
Submitted by: maintainer
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back sometime.
Hat: portmgr
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PR: ports/95610
Submitted by: maintainer
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PR: ports/93941
Submitted by: Joerg Pulz <Joerg.Pulz@frm2.tum.de> (maintainer)
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- Better description;
- Quiete some warnings;
- Pet portlint.
Submitted by: Pedro F. Giffuni <giffunip (at) yahoo.com>
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- Fix typo in pkg-plist
PR: ports/95227
Submitted by: Kay Lehmann <kay_lehmann@web.de> (maintainer)
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Changelog at <http://www.opencfd.co.uk/openfoam/version1.3.html>.
PR: 95205
Submitted by: /me
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file.
Full diff at
<http://people.freebsd.org/~thierry/ports/cdf31_4-dist_cdf31_5-dist.diff>.
Reported by: dosirak via Kris
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- Add OPTIONS for CDF and netCDF
- Pass maintainership to Kay Lehman who kindly volunteered to maintain
this port
PR: ports/94707
Submitted by: Kay Lehmann <kay_lehmann@web.de>
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PR: 94846
Submitted by: Petr Rehor <prehor (at) gmail.com>
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- portlint(1)
PR: 94805
Reported by: maintainer
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- Remove leftover USE_REINPLACE
PR: 93842
Submitted by: new maintainer
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xsmc but with a simpler user interface; written with GNU/GTK library and
released under GNU/GPL. Written by Lapo Pieri IK5NAX
WWW: http://www.qsl.net/ik5nax
PR: ports/93224
Submitted by: Diane Bruce <db (at) db.net> - VA3DB
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Changelog at <http://geuz.org/getdp/doc/VERSIONS>.
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PR: ports/94504
Submitted by: Ports Fury
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Changelog at <http://geuz.org/getdp/doc/VERSIONS>.
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PR: ports/93969
Submitted by: Pedro Giffuni <giffunip@asme.org>
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PR: ports/93968
Submitted by: Pedro Giffuni <giffunip@asme.org>
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Discussed with: kris
Approved by: portmgr (implicit)
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Since all these items were commented out, this is a null-op commit.
Approved by: portmgr (implicit)
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Reported by: Courtney Thomas <cc.thomas (at) earthlink.net>
Approved by: portmgr (marcus)
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Approved by: portmgr (marcus)
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Diff available at <http://pompo.net/ports/cdf31-dist_060216-030224.diff>:
minor fixes for Linux Intel's Fortran compiler and cdfcvt.
Approved by: portmgr (krion)
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Approved by: portmgr (kris)
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Add a patch to unbreak compilation with mpich. [2]
PR: ports/92909 [1], ports/93176 [2]
Submitted by: Kay Lehmann <kay_lehmann@web.de> (maintainer)
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Full diff at <http://pompo.net/ports/cdf31-dist_060209_060216.diff>
(fixes into cdfcvt).
Reported by: pointyhat via Kris
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the author.
PR: 93372
Submitted by: Li-Lun Wang (Leland Wang) <llwang@infor.org> (maintainer)
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Noticed by: danfe
Approved by: garga (mentor)
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associated set of tools and libraries. MINC was created in 1993 by Peter
Neelin at the McConnell Brain Imaging Centre of the Montreal Neurological
Institute. Many others have contributed to the design and implementation
MINC over the years.
PR: ports/91918
Submitted by: Jason W. Bacon <bacon (at) smithers.neuro.mcw.edu>
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- our patches to support FreeBSD have been included;
- support of Intel C++ and Fortran compilers for Linux has been added.
Full diff available at
<http://pompo.net/ports/cdf31-dist_060130_060209.diff>.
Reported by: Ion-Mihai Tetcu on #bsdports
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Reported by: thierry
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after kris' mail
Approved by: garga (mentor)
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Approved by: garga (mentor)
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- Try to fix on sparc64.
Reported by: pointyhat via Kris
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Don't bump PORTREVISION, the only diff is in Release.notes.
Reported by: pointyhat via Kris
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PR: 92497
Submitted by: /me
Repocopied by: marcus
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Author fixed the problem with filename versioning by placing filenames
without version in their name in a subdirectory on the web server.
Changes to the software itself:
-DPIC -fPIC used only for amd64 and ia64, suggested by kris
Approved by: garga (mentor)
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Reported by: pointyhat via Kris
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multi-dimensional data sets. The basic component of CDF is a software
programming interface that is a device independent view of the CDF data
model. The application developer is insulated from the actual physical
file format for reasons of conceptual simplicity, device independence,
and future expandability. CDF files created on any given platform can
be transported to any other platform on to which CDF is ported and used
with any CDF tools or layered applications.
A comparison between CDF, netCDF, HDF and HDF5 is available at
<http://cdf.gsfc.nasa.gov/html/FAQ.html>.
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-DPIC -fPIC were added to CFLAGS in Makefile.FreeBSD_PORT to make it
compile on amd64.
Approved by: garga (mentor)
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AFNI (Advanced Functional Neuro Imaging) is a tool for analyzing
3 dimensional images, especially functional MRI images used in
brain mapping research.
WWW: http://afni.nimh.nih.gov/
PR: ports/90752
Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu>
Reviewed by: garga (mentor)
Approved by: garga (mentor)
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Approved by: krion@
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Approved by: krion@
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anything from complex fluid flows involving chemical reactions, turbulence and
heat transfer, to solid dynamics, electromagnetics and the pricing of financial
options.
WWW: http://www.opencfd.co.uk/openfoam/index.html
PR: ports/91886
Submitted by: thierry
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Notified by: fenner, kris, and edwin
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Approved by: krion@
PR: ports/88711 (related)
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[2] Install shared libraries and some cmake files so ports depending on paraview
can build.
Not very tested, because it crashes my X Server (oops), though I suspect the
previous version would have as well if I'd pre-tested.
PR: [2] 91885
Submitted by: [2] Thierry
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- Fix install [1]
Reported by: krismail [1]
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- Shared lib version and PORTREVISION bumb for all affected ports.
While I'm here:
- Remove USE_MESA knob where it was (35 ports).
It marked as depricated for 2 years.
PR: ports/90247
Submitted by: Ermal Lu?i <eri--@albabsd.org>
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Submitted by: Stefan 'Steve' Tell <stefan.tell@crashmail.de>
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Subject: Ports with version numbers going backwards: graphics/kimdaba, science/gerris...
Looks like an issue with Tools/scripts/bumpportrevision, I'll check
it in a second.
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PR: ports/91270
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PR: ports/91169
Submitted by: Rong-En Fan <rafan@infor.org> (maintainer)
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PR: ports/90558
Submitted by: Ports Fury
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boundaries and so on.
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Approved by: Oliver Dunkl <odunkl@gmx.net> (MAINTAINER)
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Requested by: maintainer
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seems to be difficult to connect to at the moment and I haven't found
another mirror site.
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in bsd.autotools.mk essentially makes this a no-op given that all the
old variables set a USE_AUTOTOOLS_COMPAT variable, which is parsed in
exactly the same way as USE_AUTOTOOLS itself.
Moreover, USE_AUTOTOOLS has already been extensively tested by the GNOME
team -- all GNOME 2.12.x ports use it.
Preliminary documentation can be found at:
http://people.FreeBSD.org/~ade/autotools.txt
which is in the process of being SGMLized before introduction into the
Porters Handbook.
Light blue touch-paper. Run.
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been inactive more than 6 months. We hope to see him back sometime.
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Reported by: pointyhat via Kris.
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PR: ports/88350
Submitted by: KATO Tsuguru <tkato432@yahoo.com>
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compatible incremental compiler (i.e. runs IDL programs).
IDL is a registered trademark of Research Systems Inc.
(see: <http://www.rsinc.com/>)
Remark: slave port for Python module intentionnally not yet committed.
WWW: http://gnudatalanguage.sourceforge.net/
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Submitted by: kris, linimon, fenner
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Reported by: pointyhat via kris
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the libtiff vulnerability.
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Submitted by: fenner
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Submitted by: edwin
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- Remove uncommented Makefile code
PR: 87158
Submitted by: Oliver Dunkl <odunkl@gmx.net> (maintainer)
Approved by: novel (mentor)
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Submitted by: Martin Kroeker <martin@ruby.chemie.uni-freiburg.de>
edwin
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PR: ports/87078
Submitted by: Sangwoo Shim <borishim@gmail.com> (maintainer)
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Gerris is an Open Source Free Software library for the solution of partial
differential equations describing fluid flow. Gerris is supported by NIWA
(National Institute of Water and Atmospheric research) and by the
Marsden Fund of the Royal Society of New Zealand. The code is written
entirely in C and uses both the GLib Library and the GTS Library for
geometrical functions and object-oriented programming.
PR: 86297
Submitted by: Oliver Dunkl <odunkl (at) gmx.net>
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Update Maintainer email
PR: 86419
Submitted by: Sangwoo Shim <sangwoos@gmail.com>
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URLs automatically rewritten from /search?dist=Foo or /dist/Foo
to /dist/Foo/ (note trailing slash). After a 2002(!) reorganization,
this is the preferred way to refer to modules on search.cpan.org.
This pass brought to you by http://people.freebsd.org/~fenner/fix-search
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Thank you for your efforts in the past!
Noticed by: tobez
Approved by: portmgr (self)
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Since I"m there, pet portlint and respect NOPORTDOCS.
PR: 84746
Submitted by: Carlos A M dos Santos <casantos (at) urisan.tche.br>
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- Unconditionally install the examples
- Do not silence mkdir
[1]:
PR: ports/86100
Submitted by: TAOKA Fumiyoshi <fmysh@iijmio-mail.jp>
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PR: ports/85914
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp> (maintainer)
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Previously noticed by: pav
Hat: portmgr
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PR: ports/85897
Submitted by: maintainer
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Approved by: osa,ahze
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-O2 and -fno-unit-at-a-time.
Submitted by: Roland Smith (maintainer)
Reported by: krion via pointyhat
Approved by: portmgr (krion)
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PR: ports/83872
Submitted by: maintainer
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Approved by: perky (mentor)
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PR: ports/78836
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp>
Approved by: maintainer timeout (4 months)
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Reported by: krismail
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Interfaces for Data Analysis).
PR: ports/83599
Submitted by: Vsevolod Stakhov <vsevolod@highsecure.ru>
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PR: ports/83276
Submitted by: Rong-En Fan <rafan@infor.org> (maintainer)
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PR: ports/82680
Submitted by: maintainer
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PR: 82224
Submitted by: Raphael Langerhorst <raphael-langerhorst@gmx.at>
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with the need to visualize large data sets in mind.
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remove broken for 6
PR: 81964
Submitted by: KATO Tsuguru <tkato432@yahoo.com>
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Reported by: Kris via pointyhat
Submitted by: maintainer
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PR: ports/81939
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp> (maintainer)
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- don't use version number in installation directories
PR: ports/81798
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp>
(maintainer)
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Approved by: portmgr (marcus)
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Reported by: krismail
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PR: ports/81473
Submitted by: maintainer
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with lots of libraries etc. There are two knobs which are in development at
the moment so I disabled them with an IGNORE message. They need some work and
maybe some testing.
PR: ports/81136
Submitted by: Kay Lehmann <kay_lehmann@web.de>
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that gnome.help_display() can locate the help
- Invoke update-mime-database from the package installation and
deinstallation, since the .desktop file contains a MimeType key
- Fix the icon paths in gramps.keys
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PR: ports/81098
Submitted by: maintainer
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- Fix missing symbols/libraries at runtime
PRs: ports/74878 (TAOKA Fumiyoshi)
ports/80624 (Gregory Crosswhite)
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Lamprop takes in input file describing the lay-up and constituent materials
of a fiber-reinforced composite laminate, and calculates some mechanical
and other properties. The submitter is the original author of the software,
and will maintain the port.
PR: 81066
Submitted by: Roland Smith <rsmith (at) xs4all.nl>
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PR: 80873
Submitted by: me
Approved by: maintainer
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PR: ports/80682
Submitted by: maintainer.
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PR: ports/80645
Submitted by: Stefan 'Steve' Tell <stell@zeus.crashmail.de> (maintainer)
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Obtained from: thierry
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after 5.4-RELEASE.
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Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.
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fine without explicit version in there, while specifying it can
occasionally confuse (cf. ports/78527). Packages depend on specific
versions of Xaw3d and X libraries anyway and ports will get the right
version number through imake.
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since it now appears in the correct order.
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Clue provided by: marcus (extra patch)
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pdf files are updated without changing the version number.
Recently psi3 3.2.2 has been released, and users manual,
programmers manual and installation doc pdfs are updated accordingly.
This is tempral fix and we must update to 3.2.2 soon.
Submitted by: kris via pointyhat
Approved by: portmgr (marcus)
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Forgotten by: maho
Approved by: portmgr (self)
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Approved by: portmgr (kris)
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Approved by: portmgr (marcus)
Submitted by: kris
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fix the build on 5.x.
Reported by: mich, lofi
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PR: ports/79007
Submitted by: Shin'ya Murakami (maintainer)
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exploring
Mandelbrot sets. Features of mxp include:
- zoom and un-zoom
- dynamic resizing of drawing window
- setup save/load
- asynchronous image generation (buttons always work)
- GIF output
- animation
- nine color schemes
- color rotation
- color change options
- detailed statistics
WWW: http://www.ibiblio.org/pub/Linux/apps/math/fractals/
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PR: ports/78924
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp> (maintainer)
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is added when we're using gcc 2.95.4, but not using gcc 3.4. Since its
required, add it explicitly.
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versions of HDF:
"Szip is an implementation of the extended-Rice lossless compression
algorithm.
WWW: http://hdf.ncsa.uiuc.edu/doc_resource/SZIP/"
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. Convert to using the autoconf build infrastructure that is part of
the distribution rather than rolling our own build infrastructure.
. Take maintainership. [1]
Approved by: mi [1] (previous maintainer)
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the plist since /usr/local/bin isn't in pkg_add's PATH. Bump the PORTREVISION.
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PR: ports/76941
Submitted by: Sangwoo Shim <ssw@neo.redjade.org> (maintainer)
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PR: ports/78184
Submitted by: maintainer
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PR: ports/78315
Submitted by: Ports Fury
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PR: ports/78177
Submitted by: "Jose M."
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PR: ports/76856
Submitted by: Shin'ya Murakami <murakami (at) ahs.scitec.kobe-u.ac.jp>
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science/cdcl-gtk -> delete
science/ruby-dcl -> update to 1.5 and use gtk by default
science/ruby-dcl-gtk -> delete
science/ruby-gphys -> update to 0.3.5 and fix dependency
science/gave -> update to 1.1.3 and fix dependency
PR: ports/76853
Submitted by: maintainer
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According to Hiroki Sato:
"In teTeX 3.0, pdfetex is used for a DVI output, so the texinfo.tex
always detects the PDF output feature. Although there are several means
to fix this problem, I think disabling such detection should be simple
and enough."
Reported by: kris via pointyhat
Obtained from: hrs
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PR: ports/77731
Submitted by: Bjorn Konig <bkoenig@cs.tu-berlin.de> (maintainer)
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PR: ports/77695
Submitted by: Sam Lawrance <boris at brooknet.com.au>
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McStas is an ongoing project to create a general tool for simulating neutron
scattering instruments. The project is conducted at Risoe National Laboratory
in cooperation with the ILL.
McStas is based on a compiler that reads a high-level specification language
defining the instrument to be simulated and produces C code that performs the
Monte Carlo Simulation.
WWW: http://neutron.risoe.dk/
PR: ports/66031
Submitted by: Joerg Pulz <Joerg.Pulz@frm2.tum.de>
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PR: ports/77586
Submitted by: Rong-En Fan <rafan@infor.org> (maintainer)
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PR: ports/77523
Submitted by: Quincey Koziol <koziol@ncsa.uiuc.edu> (maintainer)
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Requested by: old maintainer
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PR: ports/77376
Submitted by: Stefan 'Steve' Tell <stell@zeus.crashmail.de> (maintainer)
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Repocopy by: marcus
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Submitted by: kris via pointyhat
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PR: ports/77070
Submitted by: Brad Huntting <huntting@glarp.com> (maintainer)
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Submitted by: Martin Kroeker <martin@ruby.chemie.uni-freiburg.de>
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PR: ports/77139
Submitted by: Ports Fury
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- Add 'java' category
PR: 77040 [1]
Submitted by: maintainer [1]
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Submitted by: kris via pointyhat
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invalidating the packing list on pointyhat. Someone with more Perl
module fu could probably do this a lot easier.
Packing list problem reported by: kris
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Submitted by: Christopher Illies <christopher.illies@web.de>,
MartinKroeker <martin@ruby.chemie.uni-freiburg.de>
(original author) and maho
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PR: ports/75342
Submitted by: maintainer.
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- Fix plist nit
PR: ports/76824 [1]
Submitted by: Johan van Selst <johans@stack.nl>
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Submitted by: linimon
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Submitted by: Christopher Illies <christopher.illies@web.de>
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- Shared libraries moved from ${PREFIX}/lib/${PORTNAME} to ${PREFIX}/lib
PR: ports/76717
Submitted by: Bjorn Konig <bkoenig@cs.tu-berlin.de> (maintainer)
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PR: 71221
Submitted by: Leland Wang
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Reported by: kris
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DeViSoRGrid application is part of that software family and is primarily used
for the following tasks, so far in 2D only:
* Geometry generation
* Manual coarse mesh generation
* Grid visualisation at all levels
All of this can be done in a very confortable manner using a simple point and
click interface like in common vector-based image processing software. Both the
reliable FEAT file format and the new FEAST format with integrated parallelism
are supported.
WWW: http://www.featflow.de/
PR: 75973
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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Submitted by: kris via pointyhat
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Submitted by: kris via pointyhat
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The Unidata units library, udunits, supports conversion of unit
specifications between formatted and binary forms, arithmetic
manipulation of unit specifications, and conversion of values
between compatible scales of measurement.
WWW: http://www.unidata.ucar.edu/packages/udunits/
Obtained from: Gentoo (partially)
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PR: ports/75954
Submitted by: Ports Fury
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Reported by: pointyhat
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PR: ports/75631
Submitted by: Ports Fury
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Configuration.
PR: 75529
Submitted by: Pedro F. Giffuni
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evolution simulation. I'm a main developer of this framework and I will also
keep the FreeBSD port up-to-date, as I'm using FreeBSD as my primary platform.
See http://www.g-system.at for details.
PR: ports/75466
Submitted by: Raphael Langerhorst <raphael-langerhorst@gmx.at>
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