| Commit message (Collapse) | Author | Age | Files | Lines |
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Add a patch to unbreak compilation with mpich. [2]
PR: ports/92909 [1], ports/93176 [2]
Submitted by: Kay Lehmann <kay_lehmann@web.de> (maintainer)
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Full diff at <http://pompo.net/ports/cdf31-dist_060209_060216.diff>
(fixes into cdfcvt).
Reported by: pointyhat via Kris
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the author.
PR: 93372
Submitted by: Li-Lun Wang (Leland Wang) <llwang@infor.org> (maintainer)
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Noticed by: danfe
Approved by: garga (mentor)
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associated set of tools and libraries. MINC was created in 1993 by Peter
Neelin at the McConnell Brain Imaging Centre of the Montreal Neurological
Institute. Many others have contributed to the design and implementation
MINC over the years.
PR: ports/91918
Submitted by: Jason W. Bacon <bacon (at) smithers.neuro.mcw.edu>
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- our patches to support FreeBSD have been included;
- support of Intel C++ and Fortran compilers for Linux has been added.
Full diff available at
<http://pompo.net/ports/cdf31-dist_060130_060209.diff>.
Reported by: Ion-Mihai Tetcu on #bsdports
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Reported by: thierry
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after kris' mail
Approved by: garga (mentor)
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Approved by: garga (mentor)
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- Try to fix on sparc64.
Reported by: pointyhat via Kris
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Don't bump PORTREVISION, the only diff is in Release.notes.
Reported by: pointyhat via Kris
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PR: 92497
Submitted by: /me
Repocopied by: marcus
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Author fixed the problem with filename versioning by placing filenames
without version in their name in a subdirectory on the web server.
Changes to the software itself:
-DPIC -fPIC used only for amd64 and ia64, suggested by kris
Approved by: garga (mentor)
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Reported by: pointyhat via Kris
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multi-dimensional data sets. The basic component of CDF is a software
programming interface that is a device independent view of the CDF data
model. The application developer is insulated from the actual physical
file format for reasons of conceptual simplicity, device independence,
and future expandability. CDF files created on any given platform can
be transported to any other platform on to which CDF is ported and used
with any CDF tools or layered applications.
A comparison between CDF, netCDF, HDF and HDF5 is available at
<http://cdf.gsfc.nasa.gov/html/FAQ.html>.
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-DPIC -fPIC were added to CFLAGS in Makefile.FreeBSD_PORT to make it
compile on amd64.
Approved by: garga (mentor)
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AFNI (Advanced Functional Neuro Imaging) is a tool for analyzing
3 dimensional images, especially functional MRI images used in
brain mapping research.
WWW: http://afni.nimh.nih.gov/
PR: ports/90752
Submitted by: Jason Bacon <bacon@smithers.neuro.mcw.edu>
Reviewed by: garga (mentor)
Approved by: garga (mentor)
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Approved by: krion@
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Approved by: krion@
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anything from complex fluid flows involving chemical reactions, turbulence and
heat transfer, to solid dynamics, electromagnetics and the pricing of financial
options.
WWW: http://www.opencfd.co.uk/openfoam/index.html
PR: ports/91886
Submitted by: thierry
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Notified by: fenner, kris, and edwin
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Approved by: krion@
PR: ports/88711 (related)
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[2] Install shared libraries and some cmake files so ports depending on paraview
can build.
Not very tested, because it crashes my X Server (oops), though I suspect the
previous version would have as well if I'd pre-tested.
PR: [2] 91885
Submitted by: [2] Thierry
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- Fix install [1]
Reported by: krismail [1]
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- Shared lib version and PORTREVISION bumb for all affected ports.
While I'm here:
- Remove USE_MESA knob where it was (35 ports).
It marked as depricated for 2 years.
PR: ports/90247
Submitted by: Ermal Lu?i <eri--@albabsd.org>
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Submitted by: Stefan 'Steve' Tell <stefan.tell@crashmail.de>
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Subject: Ports with version numbers going backwards: graphics/kimdaba, science/gerris...
Looks like an issue with Tools/scripts/bumpportrevision, I'll check
it in a second.
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PR: ports/91270
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PR: ports/91169
Submitted by: Rong-En Fan <rafan@infor.org> (maintainer)
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PR: ports/90558
Submitted by: Ports Fury
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boundaries and so on.
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Approved by: Oliver Dunkl <odunkl@gmx.net> (MAINTAINER)
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Requested by: maintainer
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seems to be difficult to connect to at the moment and I haven't found
another mirror site.
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in bsd.autotools.mk essentially makes this a no-op given that all the
old variables set a USE_AUTOTOOLS_COMPAT variable, which is parsed in
exactly the same way as USE_AUTOTOOLS itself.
Moreover, USE_AUTOTOOLS has already been extensively tested by the GNOME
team -- all GNOME 2.12.x ports use it.
Preliminary documentation can be found at:
http://people.FreeBSD.org/~ade/autotools.txt
which is in the process of being SGMLized before introduction into the
Porters Handbook.
Light blue touch-paper. Run.
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been inactive more than 6 months. We hope to see him back sometime.
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Reported by: pointyhat via Kris.
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PR: ports/88350
Submitted by: KATO Tsuguru <tkato432@yahoo.com>
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compatible incremental compiler (i.e. runs IDL programs).
IDL is a registered trademark of Research Systems Inc.
(see: <http://www.rsinc.com/>)
Remark: slave port for Python module intentionnally not yet committed.
WWW: http://gnudatalanguage.sourceforge.net/
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Submitted by: kris, linimon, fenner
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Reported by: pointyhat via kris
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the libtiff vulnerability.
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Submitted by: fenner
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Submitted by: edwin
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- Remove uncommented Makefile code
PR: 87158
Submitted by: Oliver Dunkl <odunkl@gmx.net> (maintainer)
Approved by: novel (mentor)
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Submitted by: Martin Kroeker <martin@ruby.chemie.uni-freiburg.de>
edwin
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PR: ports/87078
Submitted by: Sangwoo Shim <borishim@gmail.com> (maintainer)
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Gerris is an Open Source Free Software library for the solution of partial
differential equations describing fluid flow. Gerris is supported by NIWA
(National Institute of Water and Atmospheric research) and by the
Marsden Fund of the Royal Society of New Zealand. The code is written
entirely in C and uses both the GLib Library and the GTS Library for
geometrical functions and object-oriented programming.
PR: 86297
Submitted by: Oliver Dunkl <odunkl (at) gmx.net>
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Update Maintainer email
PR: 86419
Submitted by: Sangwoo Shim <sangwoos@gmail.com>
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URLs automatically rewritten from /search?dist=Foo or /dist/Foo
to /dist/Foo/ (note trailing slash). After a 2002(!) reorganization,
this is the preferred way to refer to modules on search.cpan.org.
This pass brought to you by http://people.freebsd.org/~fenner/fix-search
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Thank you for your efforts in the past!
Noticed by: tobez
Approved by: portmgr (self)
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Since I"m there, pet portlint and respect NOPORTDOCS.
PR: 84746
Submitted by: Carlos A M dos Santos <casantos (at) urisan.tche.br>
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- Unconditionally install the examples
- Do not silence mkdir
[1]:
PR: ports/86100
Submitted by: TAOKA Fumiyoshi <fmysh@iijmio-mail.jp>
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PR: ports/85914
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp> (maintainer)
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Previously noticed by: pav
Hat: portmgr
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PR: ports/85897
Submitted by: maintainer
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Approved by: osa,ahze
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-O2 and -fno-unit-at-a-time.
Submitted by: Roland Smith (maintainer)
Reported by: krion via pointyhat
Approved by: portmgr (krion)
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PR: ports/83872
Submitted by: maintainer
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Approved by: perky (mentor)
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PR: ports/78836
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp>
Approved by: maintainer timeout (4 months)
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Reported by: krismail
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Interfaces for Data Analysis).
PR: ports/83599
Submitted by: Vsevolod Stakhov <vsevolod@highsecure.ru>
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PR: ports/83276
Submitted by: Rong-En Fan <rafan@infor.org> (maintainer)
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PR: ports/82680
Submitted by: maintainer
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PR: 82224
Submitted by: Raphael Langerhorst <raphael-langerhorst@gmx.at>
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with the need to visualize large data sets in mind.
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remove broken for 6
PR: 81964
Submitted by: KATO Tsuguru <tkato432@yahoo.com>
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Reported by: Kris via pointyhat
Submitted by: maintainer
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PR: ports/81939
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp> (maintainer)
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- don't use version number in installation directories
PR: ports/81798
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp>
(maintainer)
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Approved by: portmgr (marcus)
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Reported by: krismail
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PR: ports/81473
Submitted by: maintainer
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with lots of libraries etc. There are two knobs which are in development at
the moment so I disabled them with an IGNORE message. They need some work and
maybe some testing.
PR: ports/81136
Submitted by: Kay Lehmann <kay_lehmann@web.de>
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that gnome.help_display() can locate the help
- Invoke update-mime-database from the package installation and
deinstallation, since the .desktop file contains a MimeType key
- Fix the icon paths in gramps.keys
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PR: ports/81098
Submitted by: maintainer
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- Fix missing symbols/libraries at runtime
PRs: ports/74878 (TAOKA Fumiyoshi)
ports/80624 (Gregory Crosswhite)
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Lamprop takes in input file describing the lay-up and constituent materials
of a fiber-reinforced composite laminate, and calculates some mechanical
and other properties. The submitter is the original author of the software,
and will maintain the port.
PR: 81066
Submitted by: Roland Smith <rsmith (at) xs4all.nl>
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PR: 80873
Submitted by: me
Approved by: maintainer
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PR: ports/80682
Submitted by: maintainer.
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PR: ports/80645
Submitted by: Stefan 'Steve' Tell <stell@zeus.crashmail.de> (maintainer)
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Obtained from: thierry
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after 5.4-RELEASE.
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Ports Collection documentation and use 'ARCH' rather than 'MACHINE_ARCH'.
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fine without explicit version in there, while specifying it can
occasionally confuse (cf. ports/78527). Packages depend on specific
versions of Xaw3d and X libraries anyway and ports will get the right
version number through imake.
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since it now appears in the correct order.
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Clue provided by: marcus (extra patch)
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pdf files are updated without changing the version number.
Recently psi3 3.2.2 has been released, and users manual,
programmers manual and installation doc pdfs are updated accordingly.
This is tempral fix and we must update to 3.2.2 soon.
Submitted by: kris via pointyhat
Approved by: portmgr (marcus)
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Forgotten by: maho
Approved by: portmgr (self)
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Approved by: portmgr (kris)
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Approved by: portmgr (marcus)
Submitted by: kris
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fix the build on 5.x.
Reported by: mich, lofi
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PR: ports/79007
Submitted by: Shin'ya Murakami (maintainer)
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exploring
Mandelbrot sets. Features of mxp include:
- zoom and un-zoom
- dynamic resizing of drawing window
- setup save/load
- asynchronous image generation (buttons always work)
- GIF output
- animation
- nine color schemes
- color rotation
- color change options
- detailed statistics
WWW: http://www.ibiblio.org/pub/Linux/apps/math/fractals/
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PR: ports/78924
Submitted by: Shin'ya Murakami <murakami@ahs.scitec.kobe-u.ac.jp> (maintainer)
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is added when we're using gcc 2.95.4, but not using gcc 3.4. Since its
required, add it explicitly.
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versions of HDF:
"Szip is an implementation of the extended-Rice lossless compression
algorithm.
WWW: http://hdf.ncsa.uiuc.edu/doc_resource/SZIP/"
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. Convert to using the autoconf build infrastructure that is part of
the distribution rather than rolling our own build infrastructure.
. Take maintainership. [1]
Approved by: mi [1] (previous maintainer)
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the plist since /usr/local/bin isn't in pkg_add's PATH. Bump the PORTREVISION.
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PR: ports/76941
Submitted by: Sangwoo Shim <ssw@neo.redjade.org> (maintainer)
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PR: ports/78184
Submitted by: maintainer
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PR: ports/78315
Submitted by: Ports Fury
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PR: ports/78177
Submitted by: "Jose M."
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PR: ports/76856
Submitted by: Shin'ya Murakami <murakami (at) ahs.scitec.kobe-u.ac.jp>
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science/cdcl-gtk -> delete
science/ruby-dcl -> update to 1.5 and use gtk by default
science/ruby-dcl-gtk -> delete
science/ruby-gphys -> update to 0.3.5 and fix dependency
science/gave -> update to 1.1.3 and fix dependency
PR: ports/76853
Submitted by: maintainer
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According to Hiroki Sato:
"In teTeX 3.0, pdfetex is used for a DVI output, so the texinfo.tex
always detects the PDF output feature. Although there are several means
to fix this problem, I think disabling such detection should be simple
and enough."
Reported by: kris via pointyhat
Obtained from: hrs
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PR: ports/77731
Submitted by: Bjorn Konig <bkoenig@cs.tu-berlin.de> (maintainer)
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PR: ports/77695
Submitted by: Sam Lawrance <boris at brooknet.com.au>
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McStas is an ongoing project to create a general tool for simulating neutron
scattering instruments. The project is conducted at Risoe National Laboratory
in cooperation with the ILL.
McStas is based on a compiler that reads a high-level specification language
defining the instrument to be simulated and produces C code that performs the
Monte Carlo Simulation.
WWW: http://neutron.risoe.dk/
PR: ports/66031
Submitted by: Joerg Pulz <Joerg.Pulz@frm2.tum.de>
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PR: ports/77586
Submitted by: Rong-En Fan <rafan@infor.org> (maintainer)
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PR: ports/77523
Submitted by: Quincey Koziol <koziol@ncsa.uiuc.edu> (maintainer)
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Requested by: old maintainer
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PR: ports/77376
Submitted by: Stefan 'Steve' Tell <stell@zeus.crashmail.de> (maintainer)
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Repocopy by: marcus
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Submitted by: kris via pointyhat
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PR: ports/77070
Submitted by: Brad Huntting <huntting@glarp.com> (maintainer)
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Submitted by: Martin Kroeker <martin@ruby.chemie.uni-freiburg.de>
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PR: ports/77139
Submitted by: Ports Fury
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- Add 'java' category
PR: 77040 [1]
Submitted by: maintainer [1]
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Submitted by: kris via pointyhat
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invalidating the packing list on pointyhat. Someone with more Perl
module fu could probably do this a lot easier.
Packing list problem reported by: kris
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Submitted by: Christopher Illies <christopher.illies@web.de>,
MartinKroeker <martin@ruby.chemie.uni-freiburg.de>
(original author) and maho
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PR: ports/75342
Submitted by: maintainer.
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- Fix plist nit
PR: ports/76824 [1]
Submitted by: Johan van Selst <johans@stack.nl>
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Submitted by: linimon
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Submitted by: Christopher Illies <christopher.illies@web.de>
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- Shared libraries moved from ${PREFIX}/lib/${PORTNAME} to ${PREFIX}/lib
PR: ports/76717
Submitted by: Bjorn Konig <bkoenig@cs.tu-berlin.de> (maintainer)
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PR: 71221
Submitted by: Leland Wang
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Reported by: kris
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DeViSoRGrid application is part of that software family and is primarily used
for the following tasks, so far in 2D only:
* Geometry generation
* Manual coarse mesh generation
* Grid visualisation at all levels
All of this can be done in a very confortable manner using a simple point and
click interface like in common vector-based image processing software. Both the
reliable FEAT file format and the new FEAST format with integrated parallelism
are supported.
WWW: http://www.featflow.de/
PR: 75973
Submitted by: Pedro F. Giffuni <giffunip@asme.org>
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Submitted by: kris via pointyhat
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Submitted by: kris via pointyhat
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The Unidata units library, udunits, supports conversion of unit
specifications between formatted and binary forms, arithmetic
manipulation of unit specifications, and conversion of values
between compatible scales of measurement.
WWW: http://www.unidata.ucar.edu/packages/udunits/
Obtained from: Gentoo (partially)
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PR: ports/75954
Submitted by: Ports Fury
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Reported by: pointyhat
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PR: ports/75631
Submitted by: Ports Fury
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Configuration.
PR: 75529
Submitted by: Pedro F. Giffuni
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evolution simulation. I'm a main developer of this framework and I will also
keep the FreeBSD port up-to-date, as I'm using FreeBSD as my primary platform.
See http://www.g-system.at for details.
PR: ports/75466
Submitted by: Raphael Langerhorst <raphael-langerhorst@gmx.at>
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PR: 70816
Submitted by: David Syphers.
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deskutils/drivel is the only port that has pkg-plist change, so bump the
PORTREVISION. The rest else should be no function change, but just remove the
patches to allow gnomehack takes care of it. Keep in mind, I only touch those
ports that already have gnomehack.
Reviewed by: pav and marcus
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Requested by: Stephen Montgomery-Smith <stephen@math.missouri.edu>
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- fix pkg-plist, bump PORTREVISION
Poked by pointyhat via Kris.
PR: ports/75248
Submitted by: maintainer
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PR: ports/74973
Submitted by: maintainer
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PR: ports/73981
Submitted by: Rong-En Fan <rafan(at)infor.org>
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- Install tools
- Make python interface to a slave port
- Respect to CXX and CFLAGS in python/Makefile
- Pass a maintainership to the submitter
PR: ports/73981
Submitted by: Rong-En Fan <rafan(at)infor.org>
Approved by: former maintainer
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- Define USE_LIBTOOL_VER;
- Bump PORTREVISION.
PR: ports/74828
Submitted by: maintainer.
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create models directly in C++ language with the use of predefined simulation
tools from the library. SIMLIB allows object-oriented description of models
based on simulation abstractions. Current version allows a description of
continuous, discrete, combined, 2D/3D vector, and fuzzy models.
Requested by: Roman Divacky
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Reported by: Kris via pointyhat.
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Approved by: bland, kwm, marcus and pav
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PR: 74013
Submitted by: Jie Gao <gaoj at cpsc.ucalgary.ca>
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- Use INSTALLS_OMF knob
PR: ports/74168
Submitted by: Stefan 'Steve' Tell <stell@zeus.crashmail.de> (maintainer)
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simulation environment with strong GUI support and an embeddable simulation
kernel. Its primary application area is the simulation of communication
networks and because of its generic and flexible architecture, it has been
successfully used in other areas like the simulation of IT systems, queueing
networks, hardware architectures and business processes as well.
PR: ports/73920
Submitted by: Bjoern Koenig <bkoenig@cs.tu-berlin.de>
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finite elements.
Suggested by: Pedro F. Giffuni.
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PR: ports/73674
Submitted by: new maintainer
Approved by: old maintainer
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big upgrade.
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PR: ports/73493
Submitted by: Andreas Fehlner <fehlner@gmx.de> (maintainer)
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.ifndef WITH_FLOAT
CONFIGURE_ARGS+= --disable-float
Submitted by: Stephen Montgomery-Smith <stephen at math.missouri.edu>
Reported by: kris via pointyhat and Bruno Afonso <brunomiguel at dequim.ist.utl.pt>
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Reported by: pointyhat via kris
Forgotten by: pav
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PR: ports/72834
Submitted by: Andreas Fehlner <fehlner@gmx.de> (maintainer)
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GROMACS is a versatile package to perform molecular dynamics,
i.e. simulate the Newtonian equations of motion for systems
with hundreds to millions of particles, and also the World's
fastest Molecular Dynamics under GPL.
PR: 71211
Submitted by: Stephen Montgomery-Smith <stephen@math.missouri.edu>
Reviewed by: Bruno Afonso <brunomiguel@dequim.ist.utl.pt>
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PR: ports/71275
Submitted by: Shin'ya Murakami <murakami at ahs dot scitec dot kobe-u dot ac dot jp> (maintainer)
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Approved by: portmgr
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Approved by: portmgr (self)
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Approved by: portmgr (self)
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Reported by: mi
Approved by: portmgr (krion)
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PR: ports/68467
Submitted by: Shin'ya Murakami
Approved by: maintainer
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PR: ports/71052
Submitted by: Stephen Montgomery-Smith (maintainer)
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PR: ports/71302
Submitted by: Ports Fury
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(2.2.2 supports gcc-3.4.x)
Submitted by: pointyhat
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Submitted by: pointyhat
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Scientific tools for Python
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PR: 70422
Submitted by: Andreas Fehlner <fehlner@gmx.de>
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analyzing large biomolecular systems using 3-D graphics and built-in scripting.
PR: ports/70509
Submitted by: Stephen Montgomery-Smith <stephen@math.missouri.edu>
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PR: ports/70547
Submitted by: Ports Fury
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Noticed by: portlint
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Passed by: portlint
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from FreeBSD 5-current's /usr/include/c++/3.3/
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