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* biology/diamond: Update to 0.9.11jrm2018-02-043-10/+14
* biology/molden: chase another intransparent upstream distfile upgrade.jmd2018-02-042-4/+4
* - Fix installing scripts and support binarieswen2018-02-044-8/+39
* Update biology/py-pysam to 0.12.0.1tcberner2018-02-042-4/+4
* biology/htslib biology/bcftools biology/samtools: Update to 1.6pizzamig2018-02-0425-897/+171
* biology/iqtree: Add EXAMPLES option and fix mess with installation ofjrm2018-02-041-1/+13
* New port, biology/iqtree: Efficient phylogenomic softwarejrm2018-02-044-0/+43
* Mark as broken ports with no public distfilesbapt2018-02-046-1/+10
* Remove dead master sitesbapt2018-02-042-2/+3
* biology/molden: unbreak by chasing latest intransparent distfile update.jmd2018-02-042-4/+4
* devel/boost-*: update to 1.65.1jbeich2018-02-041-1/+1
* devel/boost-*: enable C++11 featuresjbeich2018-02-041-1/+1
* biology/ssaha: unbreak with gcc7jbeich2018-02-041-0/+9
* Remove USES=execinfo.mat2018-02-042-2/+2
* Update tbb to 2018 and bump dependent ports' revisionsmartymac2018-02-041-1/+1
* Update to 1.007002sunpoet2018-02-043-23/+5
* Add p5-Bio-FeatureIO 1.6.905sunpoet2018-02-045-0/+67
* Fix license information for portgs that use "the same license as Perl".mat2018-02-0410-10/+10
* - Update to 1.007002wen2018-02-043-15/+4
* Bump PORTREVISION for ports depending on the canonical version of GCCgerald2018-02-0415-15/+15
* Update to 3.3.20170530sunpoet2018-02-042-3/+5
* Remove expired ports:rene2018-02-045-87/+0
* Update GNUstep core libraries.theraven2018-02-041-1/+1
* - update to 1.70wen2018-02-042-4/+4
* biology/diamond: Update to version 0.9.10jrm2018-02-042-4/+4
* - Update to 1.53wen2018-02-042-4/+4
* Deprecate ports BROKEN for more than 6 monthsantoine2017-07-221-0/+2
* biology/seaview: Update version 4.6.1=>4.6.2bofh2017-07-222-4/+4
* Chase next distfile update. Upstream contacted whether we would be allowed to...jmd2017-07-142-4/+4
* biology/molden: Unbreak by chasing their latest opaque update to the distribu...jmd2017-07-122-7/+5
* Update math/gsl to 2.4tcberner2017-07-041-1/+1
* biology/diamond: Update to version 0.9.9jrm2017-07-042-4/+4
* Update devel/readline to 7.0 patch 3sunpoet2017-06-271-1/+1
* Begin deorbit burn of ia64. We have not attempted to build packages forlinimon2017-06-251-1/+1
* Mark BROKEN.mat2017-06-221-0/+2
* biology/diamond: Update to version 0.9.8jrm2017-06-162-4/+4
* - Update WWWamdmi32017-06-102-8/+7
* - Update to 0.11.2.2wen2017-06-102-4/+4
* Previous commit unbroke the port.linimon2017-06-031-2/+0
* biology/diamond: Update to version 0.9.4jrm2017-06-032-4/+4
* Remove outdated PERL_LEVEL checksunpoet2017-06-021-8/+2
* Remove outdated PERL_LEVEL checksunpoet2017-06-021-8/+2
* Update WWWsunpoet2017-05-301-1/+1
* biology/diamond: Update to version 0.9.3jrm2017-05-292-4/+4
* Mark some ports failing on armv6, for errors classified as "clang".linimon2017-05-271-0/+2
* Mark some ports failing on armv6, for errors classified as "???".linimon2017-05-272-3/+6
* biology/molden: Chase recent upstream change of molden distfile.jmd2017-05-242-4/+4
* - Update to 0.11.2.1joneum2017-05-242-5/+5
* biology/diamond: Update to version 0.9.1jrm2017-05-232-6/+6
* Revision bump of all ports with USE_GL after consolidation of mesa-libsrezny2017-05-233-3/+3
* It is possible that r441426 will fix the build problem on armv6. Givelinimon2017-05-221-1/+0
* Mark some ports failing on power64. In cases where the error messagelinimon2017-05-221-0/+2
* Mark BROKEN: checksum and size mismatchantoine2017-05-201-0/+2
* - Update to 5.15.0wen2017-05-183-3/+14
* Mark some ports failing on power64. In cases where the error messagelinimon2017-05-135-3/+6
* - Update to 0.11.1miwi2017-05-082-4/+4
* - Update to 1.5.1miwi2017-05-072-6/+4
* bx-python is a python library and associated set of scripts to allow for rapidmiwi2017-05-064-0/+47
* pysam is a lightweight wrapper of the htslib C-API and provides facilities tomiwi2017-05-065-0/+47
* - Update to 1.69wen2017-05-032-4/+4
* devel/boost-*: update to 1.64.0jbeich2017-05-021-1/+1
* Update math/gsl to 2.3tcberner2017-05-021-0/+1
* Provide error messages for some ports failing on aarch64, and, in alinimon2017-05-022-0/+5
* 2017-04-30 devel/stormlib-ghost++: Unfetchable for more than six months (goog...ler2017-04-305-79/+0
* biology/py-biom-format: Update to version 2.1.6jrm2017-04-292-4/+5
* - Fix shebangsmiwi2017-04-221-2/+3
* - Fix shebangsmiwi2017-04-221-3/+4
* - Fix shebangsamdmi32017-04-221-3/+7
* biology/diamond: Update to version 0.8.38jrm2017-04-212-6/+5
* biology/seaview: Update version 4.6=>4.6.1bofh2017-04-122-4/+5
* biology/diamond: Update to version 0.8.37jrm2017-04-022-5/+5
* Bump PORTREVISIONs for ports depending on the canonical version of GCC andgerald2017-04-0116-11/+16
* Update devel/tbb to 2017.5martymac2017-03-071-0/+1
* Mark the remaining ports depending on Google Code as DEPRECATED, with anmat2017-03-041-0/+2
* - Update to 1.42wen2017-03-012-4/+4
* Fix USE_GITHUB's GH_TAGNAME usage.mat2017-02-282-5/+5
* biology/plinkseq: unbreak with clang 4.0jbeich2017-02-272-0/+12
* biology/bowtie2: update to 2.3.0jbeich2017-02-274-6/+48
* Mark a few more ports that create large logfiles broken on armv6.linimon2017-02-26