Version 3 of the FASTA packages contains many programs for searching DNA and
protein databases and one program (prss3) for evaluating statistical
significance from randomly shuffled sequences.  Several additional analysis
programs, including programs that produce local alignments, are available as
part of version 2 of the FASTA package, which is available as the port
biology/fasta.

FASTA is described in:  W. R. Pearson and D. J. Lipman (1988), "Improved
Tools for Biological Sequence Analysis", PNAS 85:2444-2448; W. R.  Pearson
(1996) "Effective protein sequence comparison" Meth. Enzymol.  266:227-258;
Pearson et. al.  (1997) Genomics 46:24-36;  Pearson, (1999) Meth. in
Molecular Biology 132:185-219.

The FASTA3 suite is distributed freely subject to the condition that it may
not be sold or incorporated into a commercial product.

Author: William R Pearson <wrp@virginia.edu>
WWW:    http://fasta.bioch.virginia.edu/

-- Johann Visagie <johann@egenetics.com>
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<div class='path'>path: <a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/log/?id=07a7f60f235a4f2584ea5f00ed68f74d13570dd6'>root</a>/<a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/log/www?id=07a7f60f235a4f2584ea5f00ed68f74d13570dd6'>www</a>/<a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/log/www/mod_log_sql2?id=07a7f60f235a4f2584ea5f00ed68f74d13570dd6'>mod_log_sql2</a></div><div class='content'><table class='list nowrap'><tr class='nohover'><th></th><th class='left'>Commit message (<a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/log/www/mod_log_sql2?id=07a7f60f235a4f2584ea5f00ed68f74d13570dd6&amp;showmsg=1'>Expand</a>)</th><th class='left'>Author</th><th class='left'>Age</th><th class='left'>Files</th><th class='left'>Lines</th></tr>
<tr><td class='commitgraph'>* </td><td><a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/commit/www/mod_log_sql2?id=bb1dbd525b77581fe2c3f1a8a08bcd09858c4e66'> - bump PORTREVISION from ports if USE_APACHE=13+ or 20+ is defined</a></td><td>ohauer</td><td><span title='2011-08-21 01:27:52 +0800'>2011-08-21</span></td><td>1</td><td><span class='deletions'>-1</span>/<span class='insertions'>+1</span></td></tr>
<tr><td class='commitgraph'>* </td><td><a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/commit/www/mod_log_sql2?id=056be463304d28e78c9e4bc4cec48069162eba85'>Bump PORTREVISION for ports linking to default libmysqlclient.</a></td><td>ale</td><td><span title='2011-03-19 21:15:34 +0800'>2011-03-19</span></td><td>1</td><td><span class='deletions'>-1</span>/<span class='insertions'>+1</span></td></tr>
<tr><td class='commitgraph'>* </td><td><a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/commit/www/mod_log_sql2?id=bf611f32e5955d5ef614b66c8452904d878d27ac'>- dbi.0 =&gt; dbi.1</a></td><td>clsung</td><td><span title='2011-03-07 23:59:27 +0800'>2011-03-07</span></td><td>1</td><td><span class='deletions'>-2</span>/<span class='insertions'>+2</span></td></tr>
<tr><td class='commitgraph'>* </td><td><a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/commit/www/mod_log_sql2?id=e3a582a05a86e8138d3e2b769b5d01369c6c7141'>- fix pkg-plist</a></td><td>ohauer</td><td><span title='2011-02-14 03:45:34 +0800'>2011-02-14</span></td><td>2</td><td><span class='deletions'>-4</span>/<span class='insertions'>+9</span></td></tr>
<tr><td class='commitgraph'>* </td><td><a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/commit/www/mod_log_sql2?id=1e9a846239a068eff4e4aa6c3a0032a061665e2d'>- 1/3:</a></td><td>pgollucci</td><td><span title='2010-05-28 05:19:17 +0800'>2010-05-28</span></td><td>1</td><td><span class='deletions'>-1</span>/<span class='insertions'>+1</span></td></tr>
<tr><td class='commitgraph'>* </td><td><a href='/~lantw44/cgit/cgit.cgi/freebsd-ports-graphics/commit/www/mod_log_sql2?id=ed479ecfa1bf3c8639f00ee2604be504c6171de1'>Mk/bsd.apache.mk can not sufficiently alter things before Mk/bsd.options.mk</a></td><td>pgollucci</td><td><span title='2010-05-26 04:17:37 +0800'>2010-05-26</span>