--------------------------------------------------------------------------- HMMER reads three optional environment variables: HMMERDB - directory location of HMM databases (e.g. PFAM) BLASTDB - directory location of FASTA-formatted sequence databases BLASTMAT - directory location of PAM scoring matrices The BLASTDB and BLASTMAT variables are shared with versions of BLAST such as NCBI BLAST 2.0 (contained in the biology/ncbi-toolkit port). If these variables are set, you do not have to specify the full path to your databases on the command line when using HMMER. Please see the documentation for more information. --------------------------------------------------------------------------- sitory'/>
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* SIZEify (maintainer timeout)trevor2004-03-311-0/+1
* Per distfile survey, chase new mastersite. Informed maintainer.linimon2003-10-291-1/+1
* update to sysutils/socket: NetBSD IPv6 patches importededwin2003-09-295-14/+756
* De-pkg-comment.wosch2003-03-052-1/+1
* ports/sysutils/socket install ignores ${DESTDIR}wosch2002-06-241-0/+13
* Massive style enforcement - use ^I instead of spaces for variables identation.sobomax2001-01-171-2/+2
* The descr is not a place to just cram the entire README. Instead, take thebillf2000-11-023-137/+7
* Corrrect whitespace introduced during PORTNAME conversion and portlintmharo2000-04-221-1/+1
* Update with the new PORTNAME/PORTVERSION variablecpiazza2000-04-101-2/+2
* Update master site.wosch1999-09-191-1/+1
* $Id$ -> $FreeBSD$peter1999-08-311-1/+1
* #4/4 enforcing Caps, no periodhoek1999-06-271-1/+1
* These manpages removed by Tim Vanderhoek.hoek1998-08-20