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* biology/taxonkit: New port: Practical and efficient NCBI taxonomy toolkitYuri Victorovich2021-05-271-0/+1
* biology/unikmer: New port: Toolkit for nucleic acid k-mer analysis, set opera...Yuri Victorovich2021-05-271-0/+1
* New port: biology/seqan3: C++ header-only library for biological sequence ana...Yuri Victorovich2021-05-121-0/+1
* Hook biology/ucsc-userapps to the buildAntoine Brodin2021-04-261-0/+1
* biology/ncbi-entrez-direct: Access to the NCBI's interconnected databasesJason W. Bacon2021-04-251-0/+1
* New port: biology/py-resdk: Resolwe SDK to interact with Resolwe server and R...Yuri Victorovich2021-04-201-0/+1
* biology/snpeff: Genetic variant annotation and effect prediction toolboxJason W. Bacon2021-04-191-0/+1
* biology/bbmap: BBMap short read aligner, and other bioinformatic toolsJason W. Bacon2021-04-191-0/+1
* biology/readseq: Read and reformat biosequences, Java command-line versionJason W. Bacon2021-04-181-0/+1
* New port: biology/seqkit: Cross-platform and ultrafast toolkit for FASTA/Q fi...Yuri Victorovich2021-04-171-0/+1
* biology/py-crossmap: Lift over genomics coordinates between assembliesJason W. Bacon2021-04-131-0/+1
* biology/py-bigwig: Python access to bigWig files using libBigWigJason W. Bacon2021-04-131-0/+1
* New port: biology/ncbi-vdb: NCBI's virtualized back-end for accessing Sequenc...Yuri Victorovich2021-04-121-0/+1
* Remove expired ports:Rene Ladan2021-04-081-3/+0
* One more small cleanup, forgotten yesterday.Mathieu Arnold2021-04-071-1/+0
* Remove # $FreeBSD$ from Makefiles.Mathieu Arnold2021-04-061-2/+0
* biology/vcf2hap: Generate .hap file from VCF for haplohseqJason W. Bacon2021-03-241-0/+1
* biology/ad2vcf: Add allelic depth info from a SAM stream to a VCF fileJason W. Bacon2021-03-231-0/+1
* biology/vcf-split: Split a multi-sample VCF into single-sample VCFsJason W. Bacon2021-03-211-0/+1
* biology/biolibc: Low-level high-performance bioinformatics libraryJason W. Bacon2021-03-211-0/+1
* biology/generand: Generate random genomic data in FAST[AQ], SAM, or VCF formatJason W. Bacon2021-03-161-0/+1
* Move: biology/py-fastTSNE -> math/py-openTSNEYuri Victorovich2021-03-141-1/+0
* New port: biology/rampler: Standalone module for sampling genomic sequencesYuri Victorovich2021-01-191-0/+1
* New port: biology/edlib: Fast C++ library for sequence alignment using edit d...Yuri Victorovich2021-01-191-0/+1
* New port: biology/spoa: C++ implementation of the partial order alignment (PO...Yuri Victorovich2021-01-191-0/+1
* New port: biology/biosoup: Collection of C++ header-only data structures for ...Yuri Victorovich2021-01-191-0/+1
* New port: biology/bioparser: C++ header only parsing library for several form...Yuri Victorovich2021-01-191-0/+1
* Hook haplohseq to the buildAntoine Brodin2021-01-151-0/+1
* biology/pooler: Optimise DNA sequencing primer-set combinationsJason W. Bacon2020-11-161-0/+1
* biology/py-biom-format: Restore in preparation for an update to v2.1.8Joseph Mingrone2020-09-251-0/+1
* Remove expired ports:Rene Ladan2020-09-191-2/+0
* Remove expired ports:Rene Ladan2020-08-271-1/+0
* Remove deprecated ports:Rene Ladan2020-08-151-1/+0
* Add rubygem-bio-shell 1.0.0Sunpoet Po-Chuan Hsieh2020-07-241-0/+1
* Add rubygem-bio-old-biofetch-emulator 1.0.0Sunpoet Po-Chuan Hsieh2020-07-241-0/+1
* Add rubygem-bio-executables 1.0.0Sunpoet Po-Chuan Hsieh2020-07-24