# Created by: Eric van Gyzen # $FreeBSD$ PORTNAME= mcmc-jags PORTVERSION= 4.2.0 PORTREVISION= 3 CATEGORIES= math MASTER_SITES= SF/mcmc-jags/JAGS/${S}.x/Source/:1 \ SF/mcmc-jags/Examples/${S}.x/:2 \ SF/mcmc-jags/Manuals/2.x/:3 \ SF/mcmc-jags/Manuals/${S}.x/:4 DISTFILES= JAGS-${PORTVERSION}${EXTRACT_SUFX}:1 DIST_SUBDIR= ${PORTNAME} EXTRACT_ONLY= ${DISTFILES:M*[12]:C|:.*||} MAINTAINER= ports@FreeBSD.org COMMENT= Just Another Gibbs Sampler LICENSE= GPLv2 GNU_CONFIGURE= yes USES= bison compiler:features fortran gmake libtool localbase pathfix USE_GCC= yes USE_LDCONFIG= yes INSTALL_TARGET= install-strip WRKSRC= ${WRKDIR}/JAGS-${PORTVERSION} OPTIONS_SINGLE= BLAS OPTIONS_SINGLE_BLAS= ATLAS OPENBLAS NETLIB OPTIONS_DEFAULT+= OPENBLAS ATLAS_USES= blaslapack:atlas ATLAS_VARS= MANUAL_PACKAGE_BUILD=\ "Choose a BLAS option other than ATLAS for package building." NETLIB_USES= blaslapack:netlib OPENBLAS_USES= blaslapack:openblas DOCS_DISTFILES= jags_developer_manual.pdf:3 jags_installation_manual.pdf:4 \ jags_user_manual.pdf:4 DOCS_PORTDOCS= ${DISTFILES:M*[34]:C|:.*||} EXAMPLES_DISTFILES= classic-bugs.tar.gz:2 EXAMPLES_PORTEXAMPLES= * CONFIGURE_ARGS+= --with-blas="-L${LOCALBASE}/lib ${BLASLIB}" \ --with-lapack="${LAPACKLIB}" OPTIONS_SUB= YES PLIST_SUB= MODULEVERSION=${S} S= ${PORTVERSION:C|\..*||} OPTIONS_DEFINE= DOCS EXAMPLES post-patch: @${REINPLACE_CMD} \ -e '/@WINDOWS_FALSE@bin_SCRIPTS =/s/jags/mcmc-&/' \ -e '/CLEANFILES =/s/jags/mcmc-&/' \ -e '/@WINDOWS_FALSE@jags:/s/jags/mcmc-&/' \ -e '/@WINDOWS_FALSE@.*rm -f jags/s/jags/mcmc-&/' \ -e '/@WINDOWS_FALSE@.*mv jags.tmp jags/s/jags/mcmc-&/2' \ ${WRKSRC}/src/terminal/Makefile.in post-patch-EXAMPLES-on: @${SED} -i '' -e '\|JAGS ?=|{s|jags|mcmc-&|;s|/usr/local|${PREFIX}|;}' \ ${WRKDIR}/classic-bugs/vol[12]/Makefile post-install-DOCS-on: @${MKDIR} ${STAGEDIR}${DOCSDIR} @cd ${_DISTDIR}; ${INSTALL_DATA} ${PORTDOCS} ${STAGEDIR}${DOCSDIR} post-install-EXAMPLES-on: @${MKDIR} ${STAGEDIR}${EXAMPLESDIR} @cd ${WRKDIR}/classic-bugs; ${COPYTREE_SHARE} \* ${STAGEDIR}${EXAMPLESDIR} .if defined(MAINTAINER_MODE) BUILD_DEPENDS+= ${LOCALBASE}/lib/R/library/coda/R/coda.rdb:math/R-cran-coda check test: install .for i in 1 2 @cd ${WRKDIR}/classic-bugs/vol${i}; ${SETENV} ${MAKE_ENV} \ ${MAKE_CMD} ${MAKE_ARGS} check .endfor @${FIND} ${WRKDIR}/classic-bugs -type f -name check.log | ${SORT} | \ ${XARGS} -tI @ ${CAT} @ .endif .include st-1.2.2 FreeBSD GNOME current development ports (https://github.com/freebsd/freebsd-ports-gnome)
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