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* Remove BROKEN_FreeBSD_9sunpoet2017-01-012-3/+0
* biology/diamond: Update to version 0.8.30jrm2016-12-312-4/+4
* biology/ncbi-blast+: Add MAKE_JOBS_UNSAFEjrm2016-12-231-0/+2
* - Update to 1.007001sunpoet2016-12-212-4/+4
* biology/bowtie2: Update to version 2.2.9jrm2016-12-212-14/+18
* biology/cd-hit: Update to bug-fix release 4.6.6jrm2016-12-212-5/+4
* biology/jellyfish: Update to version 2.2.6jrm2016-12-203-54/+56
* - Update *_DEPENDS: Bio::Coordinate family has been moved from biology/p5-Bio...sunpoet2016-12-191-2/+4
* - Add p5-Bio-Coordinate 1.007001sunpoet2016-12-195-0/+58
* - Update to 1.007000sunpoet2016-12-194-20/+29
* - Update to 1.007001sunpoet2016-12-196-383/+180
* - Update to 2.5.0wen2016-12-195-68/+190
* - Update to 2.40sunpoet2016-12-183-10/+22
* - Move biology/p5-bioperl-run to biology/p5-BioPerl-Runsunpoet2016-12-186-8/+10
* - Add LICENSE_FILEsunpoet2016-12-181-2/+5
* - Add LICENSEsunpoet2016-12-181-4/+8
* - Add LICENSEsunpoet2016-12-181-1/+7
* - Move biology/p5-bioperl to biology/p5-BioPerlsunpoet2016-12-187-9/+7
* biology/diamond: Update to version 0.8.29jrm2016-12-182-4/+4
* biology/protomol: Support build with C++11 (taken from dports)marino2016-12-185-0/+48
* biology/blat: Fix build on DF (taken from dports)marino2016-12-181-0/+14
* biology/lamarc: Fix build on DF (taken from dports)marino2016-12-181-0/+11
* biology/chemeq: fix build on GCC (taken from dports)marino2016-12-181-0/+11
* Remove libintl.so.9 compatibility link that was added in r374303 totijl2016-12-093-2/+3
* Remove libjpeg.so.11 compatibility link that was added in r374303 totijl2016-12-091-0/+1
* Bump PORTREVISIONS for ports depending on the canonical version of GCC andgerald2016-12-077-5/+7
* biology/molden: distfile was updated in xwin.cpi2016-12-042-4/+4
* Do not use post-stage. Use post-install instead.mat2016-12-021-1/+1
* biology/njplot: Add site in MASTER_SITES because package builders arejrm2016-11-281-2/+4
* biology/diamond: Update to version 0.8.28jrm2016-11-282-5/+6
* Fixup USE_GITHUB usage.mat2016-11-262-3/+3
* Replace USE_GCC=4.9+ by USE_GCC=yes, now that lang/gcc and the defaultgerald2016-11-261-1/+1
* devel/boost-*: update to 1.62.0jbeich2016-11-231-0/+1
* - Remove unnecessary USES=shebangfixsunpoet2016-11-211-4/+8
* Bump PORTREVISIONS for ports depending on the canonical version of GCC andgerald2016-11-205-2/+5
* biology/avida: Fix ncurses from ports supportmarino2016-11-191-1/+3
* biology/njplot: Revive and update to version 2.4jrm2016-11-165-0/+109
* Mark various leaf ports broken on aarch64, and, where appropriate, otherlinimon2016-11-114-2/+8
* Attempt to fix build on non-x86 archs.linimon2016-11-111-3/+5
* biology/seqtools: update 4.43.0 -> 4.44.1pi2016-11-113-4/+14
* biology/molden: add missing LICENSE_NAMEpi2016-11-101-1/+2
* biology/molden: fix distinfo, set LICENSEpi2016-11-102-7/+11
* The 64-bit arm arch is actually spelled 'aarch64', not 'arm64'.linimon2016-11-093-3/+3
* Mark as broken on arm64.linimon2016-11-081-0/+2
* Mark broken on all tier-2 archs.linimon2016-11-081-0/+3
* Mark broken on the rest of the tier-2 archs: invokes x86 asm.linimon2016-11-081-1/+4
* biology/diamond: Update to version 0.8.26jrm2016-11-062-4/+4
* Cleanup no longer needed CHMOD usage after r424898.mat2016-11-03