blob: 5d97534f4eb32cbff956c2233810e7e2a6834281 (
plain) (
blame)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
|
# New ports collection makefile for: emboss
# Date created: 31 July 2000
# Whom: Johann Visagie <johann@egenetics.com>
#
# $FreeBSD$
#
PORTNAME= emboss
PORTVERSION= 1.9.1
CATEGORIES= biology
MASTER_SITES= ftp://ftp.uk.embnet.org/pub/EMBOSS/ \
ftp://ftp.no.embnet.org/pub/EMBOSS/ \
ftp://ftp.es.embnet.org/pub/software/emboss/EMBOSS/ \
ftp://ftp.ebi.ac.uk/pub/software/unix/EMBOSS/
DISTFILES= ${PORTNAME:U}-${PORTVERSION}${EXTRACT_SUFX}
DIST_SUBDIR= ${PORTNAME}
EXTRACT_ONLY= ${PORTNAME:U}-${PORTVERSION}${EXTRACT_SUFX}
MAINTAINER= johann@egenetics.com
LIB_DEPENDS= gd.1:${PORTSDIR}/graphics/gd \
png.4:${PORTSDIR}/graphics/png
USE_GMAKE= yes
USE_LIBTOOL= yes
USE_XLIB= yes
USE_MOTIF= yes
PKGMESSAGE= ${WRKDIR}/pkg-message
.if exists(${WRKDIRPREFIX}${.CURDIR}/Makefile.inc)
.include "${WRKDIRPREFIX}${.CURDIR}/Makefile.inc"
.endif
CONFIGURE_ENV+= CPPFLAGS="-I${LOCALBASE}/include/gd" \
LIBS="-L${LOCALBASE}/lib -L${X11BASE}/lib"
SCRIPTS_ENV+= WRKDIRPREFIX="${WRKDIRPREFIX}" \
MKDIR="${MKDIR}" RM="${RM}"
WRKSRC= ${WRKDIR}/${PORTNAME:U}-${PORTVERSION}
EMBASSY_WRKDIR= ${WRKSRC}/EMBASSY
EMNU_VERSION= 1.0.3
MSE_VERSION= 0.0.4
TOPO_VERSION= 0.1
PHYLIP_VERSION= 3.573c
DOC_DIRS= doc/manuals doc/tutorials doc/programs/text doc/programs/html
.for app in EMNU MSE PHYLIP TOPO
SCRIPTS_ENV+= ${app}_VERSION="${${app}_VERSION}"
.if defined(WITH_${app})
APPLIST+= ${app}
${app}_WRKSRC= ${EMBASSY_WRKDIR}/${app}-${${app}_VERSION}
${app}_DISTFILE=${app}-${${app}_VERSION}${EXTRACT_SUFX}
DISTFILES+= ${${app}_DISTFILE}
PLIST_${app}= ""
.else
PLIST_${app}= "@comment "
.endif
PLIST_SUB+= PLIST_${app}=${PLIST_${app}}
.endfor
pre-fetch:
@ ${SETENV} ${SCRIPTS_ENV} ${SH} ${SCRIPTDIR}/configure.${PORTNAME}
post-extract:
.for app in ${APPLIST}
@ ${MKDIR} ${EMBASSY_WRKDIR}
@ cd ${EMBASSY_WRKDIR} && ${EXTRACT_CMD} ${EXTRACT_BEFORE_ARGS} \
${_DISTDIR}/${${app}_DISTFILE} ${EXTRACT_AFTER_ARGS}
@ if [ `id -u` = 0 ]; then \
${CHMOD} -R ug-s ${${app}_WRKSRC}; \
${CHOWN} -R 0:0 ${${app}_WRKSRC}; \
fi
.endfor
post-patch:
.for DIR in ${DOC_DIRS}
@ ${PERL} -pi.orig -e \
's#\$$\(prefix\)/share/\$$\(PACKAGE\)/doc#\$$\(datadir\)/doc/\$$\(PACKAGE\)#' \
${WRKSRC}/${DIR}/Makefile.in
.endfor
post-configure:
.for app in ${APPLIST}
@ (cd ${${app}_WRKSRC} && \
${SETENV} CC="${CC}" CXX="${CXX}" CFLAGS="${CFLAGS}" \
CXXFLAGS="${CXXFLAGS}" \
INSTALL="/usr/bin/install -c -o ${BINOWN} -g ${BINGRP}" \
INSTALL_DATA="${INSTALL_DATA}" \
INSTALL_PROGRAM="${INSTALL_PROGRAM}" \
INSTALL_SCRIPT="${INSTALL_SCRIPT}" \
${CONFIGURE_ENV} ./${CONFIGURE_SCRIPT} ${CONFIGURE_ARGS})
.endfor
post-build:
.for app in ${APPLIST}
@ (cd ${${app}_WRKSRC} && \
${SETENV} ${MAKE_ENV} ${GMAKE} ${MAKE_FLAGS} ${MAKEFILE} \
${MAKE_ARGS})
.endfor
post-install:
.for app in ${APPLIST}
@ (cd ${${app}_WRKSRC} && \
${SETENV} ${MAKE_ENV} ${GMAKE} ${MAKE_FLAGS} ${MAKEFILE} \
${MAKE_ARGS} ${INSTALL_TARGET})
.endfor
@ ${INSTALL_DATA} ${WRKSRC}/emboss/acd/emboss.default \
${PREFIX}/etc/emboss.default.sample
.if !defined(BATCH)
@ ${PERL} -pe 's#%%PREFIX%%#${PREFIX}#' \
pkg-message > ${PKGMESSAGE}
@ ${CAT} ${PKGMESSAGE}
.endif
post-clean:
@ ${RM} -f ${WRKDIRPREFIX}${.CURDIR}/Makefile.inc
.include <bsd.port.mk>
|
