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# ex:ts=8
# New ports collection makefile for: fasta3
# Date created: 29 January 2001
# Whom: Johann Visagie <johann@egenetics.com>
#
# $FreeBSD$
#
PORTNAME= fasta3
PORTVERSION= 34.t25.d8
CATEGORIES= biology
MASTER_SITES= ftp://ftp.virginia.edu/pub/fasta/ \
${MASTER_SITE_LOCAL}
MASTER_SITE_SUBDIR= sem
DISTNAME= fasta${PORTVERSION:S/.//g}
EXTRACT_SUFX= .shar.Z
MAINTAINER= fernan@iib.unsam.edu.ar
COMMENT= A collection of programs for searching DNA and protein databases
NO_CDROM= May not be sold or incorporated into a commercial product
WRKSRC= ${WRKDIR}/${PORTNAME}
SUB_FILES= pkg-message
MAKEFILE= Makefile.freebsd
XDIR= ${PREFIX}/bin
FASTA_HOST!= /usr/bin/uname -n
MAKE_ENV+= THR_LIBS=${PTHREAD_LIBS} XDIR=${XDIR} \
FASTA_HOST='"${FASTA_HOST}"'
FASTA3_DOCS= README COPYRIGHT FASTA_LIST fasta3x.me fasta3x.doc \
fasta20.doc fasta_func.doc readme.* fasta.defaults
DATA= *.mat
EXAMPLES= *.aa *.lc *.seq
MAN1= fasta3.1 fastf3.1 fasts3.1 map_db.1 prss3.1
MLINKS= fasta3.1 tfasta3.1 fasta3.1 fastx3.1 fasta3.1 tfastx3.1 \
fasta3.1 fasty3.1 fasta3.1 tfasty3.1 fasta3.1 ssearch3.1 \
fastf3.1 tfastf3.1 fasts3.1 tfasts3.1
do-extract:
@ ${RM} -rf ${WRKDIR}
@ ${MKDIR} ${WRKSRC}
@ for file in ${EXTRACT_ONLY}; do \
cd ${WRKSRC} && (${GZCAT} ${DISTDIR}/$${file} | ${SH} >/dev/null); \
done
post-install:
${INSTALL_DATA} ${WRKSRC}/fastlibs ${PREFIX}/etc/fastlibs.sample
@ ${MKDIR} ${DATADIR}
.for data in ${DATA}
${INSTALL_DATA} ${WRKSRC}/${data} ${DATADIR}
.endfor
@ ${MKDIR} ${EXAMPLESDIR}
.for ex in ${EXAMPLES}
${INSTALL_DATA} ${WRKSRC}/${ex} ${EXAMPLESDIR}
.endfor
.for manpage in ${MAN1}
@ ${INSTALL_MAN} ${WRKSRC}/${manpage} ${MAN1PREFIX}/man/man1/
.endfor
.if !defined(NOPORTDOCS)
@ ${MKDIR} ${DOCSDIR}
.for docfile in ${FASTA3_DOCS}
@ ${INSTALL_DATA} ${WRKSRC}/${docfile} ${DOCSDIR}
.endfor
.endif
@ ${CAT} ${PKGMESSAGE}
.include <bsd.port.mk>
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