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# New ports collection Makefile for: nab
# Date created: Sept. 10, 2000
# Whom: M. L. Dodson <bdodson@scms.utmb.edu>
#
# $FreeBSD$
#
PORTNAME= nab
PORTVERSION= 4.4
CATEGORIES= biology
MASTER_SITES= ftp://ftp.scripps.edu/pub/case/ \
http://www.scripps.edu/case/
MAINTAINER= bdodson@scms.utmb.edu
MAKE_ENV+= NABHOME=${WRKSRC} ARCH= PATH=${WRKSRC}/bin:${PATH}
USE_BISON= yes
MAN1= nab.1
MANCOMPRESSED= yes
BINARIES= matextract matmul teLeap tss_main \
matgen nab transform tss_next \
matmerge nab2c tss_init ucpp
LIBRARIES= cifparse.a libnab.a libsym.a
INCS= defreal.h nab.h nabcode.h nabtypes.h
post-extract:
@${CP} ${FILESDIR}/config.h ${WRKSRC}
pre-patch:
@${PERL} -pi -e 's,<malloc.h>,<stdlib.h>,' \
${WRKSRC}/cifparse/cifparse.c
post-patch:
@rm -f ${WRKSRC}/examples/program_7.nab.orig
pre-install:
@cd ${WRKSRC}/src && \
${SETENV} PREFIX=${PREFIX} ${MAKE} beforerealinstall
do-install:
@-mkdir -p ${PREFIX}/share/nab
@-mkdir -p ${PREFIX}/share/nab/bin
@-mkdir -p ${PREFIX}/share/nab/include
@-mkdir -p ${PREFIX}/share/nab/lib
.if !defined(NOPORTDOCS)
@cd ${WRKSRC} && (tar cf - examples test peptide suppose | \
(cd ${PREFIX}/share/nab; tar xf -))
@-mkdir -p ${PREFIX}/share/doc/nab
${INSTALL_MAN} ${WRKSRC}/doc/NAB.pdf ${PREFIX}/share/doc/nab
.endif
@cd ${WRKSRC} && (tar cf - dgdb reslib fd_data | \
(cd ${PREFIX}/share/nab; tar xf -))
@(cd ${PREFIX}/share; ${CHOWN} -R ${SHAREOWN}:${SHAREGRP} nab; \
${CHMOD} -R ugo+rX-w nab)
@-(cd ${PREFIX}/share/nab && ${LN} -sf ../NDB coords)
${INSTALL_PROGRAM} ${WRKSRC}/bin/* ${PREFIX}/bin
${INSTALL_DATA} ${WRKSRC}/include/* ${PREFIX}/include
${INSTALL_DATA} ${WRKSRC}/lib/* ${PREFIX}/lib
@-cd ${WRKSRC}/doc && ${GZIP_CMD} ${MAN1}
${INSTALL_MAN} ${WRKSRC}/doc/nab.1.gz ${PREFIX}/man/man1
.for f in ${BINARIES}
@cd ${PREFIX}/share/nab/bin && ${LN} -sf ../../../bin/${f} .
.endfor
.for f in ${LIBRARIES}
@cd ${PREFIX}/share/nab/lib && ${LN} -sf ../../../lib/${f} .
.endfor
.for f in ${INCS}
@cd ${PREFIX}/share/nab/include && ${LN} -sf ../../../include/${f} .
.endfor
post-install:
@${CAT} ${PKGMESSAGE}
.include <bsd.port.mk>
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