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-ports-gnome/commit/biology?h=gnome-3.28&id=88ff08998f6dc422fea4f55ec716df5bdda4362f'>- Update to 2.3.2sem2004-11-265-69/+38 * Minor cleanup.linimon2004-11-231-2/+2 * - Update biology/biojava to 1.30vs2004-11-223-613/+255 * With portmgr hat on, reset inactive maintainer. These ports are now uplinimon2004-11-208-8/+8 * With portmgr hat on, reset inactive maintainer.linimon2004-11-201-1/+1 * - Distfiles change every few days, so drop md5 checking on thempav2004-11-182-4/+5 * Add blast, a powerful software package for gene and protein identification,pav2004-11-126-0/+324 * Bump PORTREVISIONS for all ports that depend on atk or pango to ease in themarcus2004-11-084-4/+4 * - Fix build on amd64 (crude hack to pass -fPIC to c++ compiles)pav2004-11-071-0/+11 * Update to 3.14kevlo2004-11-063-5/+4 * Correct a typo: s/linux-opera/linux-openmotif/g.mezz2004-11-021-1/+1 * - Update to 2004.06.16pav2004-11-024-167/+276 * Chase the linux-openmotif shared library version and mark biology/spdbv asmezz2004-11-021-1/+4 * Now installs on FreeBSD 5.x.kris2004-10-291-7/+1 * - Update to 1.30pav2004-10-283-128/+209 * Avoid the use of != statements in ports Makefilemaho2004-10-241-1/+5 * - Update to 3.62pav2004-10-123-6/+16 * BROKEN on 5.x: Does not compilekris2004-09-291-1/+7 * Upgrade to latest revision to make fetchable again.thierry2004-09-252-3/+3 * Update config.h and unbreak.thierry2004-09-241-2/+2 * The build should be fixed now, so remove BROKEN mark.danfe2004-09-231-7/+1 * BROKEN on 5.x: Does not compilekris2004-09-191-1/+7 * BROKEN on 5.x: Does not installkris2004-09-191-0/+4 * BROKEN on 5.x: Does not installkris2004-09-191-0/+4 * Unbreak the build on 5.X and -CURRENT.danfe2004-09-181-0/+44 * BROKEN on 5.x: Does not compilekris2004-09-181-1/+7 * - add missing MAN1 and MAN3leeym2004-09-042-357/+537 * - Unbreak by upgrading to 4.2;thierry2004-08-204-444/+387 * biology/lsysexp is not brokenedwin2004-08-181-3/+5 * This is now buildable on 5.x, remove BROKEN.kris2004-08-171-7/+1 * After devel/p5-File-Temp has gained an IGNORE for PERL_LEVEL > 500800, allmat2004-08-121-1/+3 * - Update to 5.2pav2004-07-312-3/+13 * Use X_IMAKE_PORT instead of dist-specific imake dependencies. While here,anholt2004-07-241-6/+3 * Update to version 2.7.2.1.1krion2004-07-105-42/+35 * Apply a big libtool patch to allow porters to use the libtool installed bymarcus2004-07-101-1/+1 * Fix distsitevs2004-07-061-2/+1 * BROKEN: Checksum mismatchkris2004-07-031-0/+2 * Update to 4.6vs2004-07-027-51/+58 * BROKEN: Does not buildkris2004-07-021-0/+2 * Update to fix fetch. Rework PORTVERSION to be more like biology/fasta3linimon2004-07-014-9/+11 * Chase mastersite and fix checksum to unbreak. (Changes are inclusion of alinimon2004-07-012-8/+4 * Update to 1.7.6.1.linimon2004-06-304-11/+43 * Drop maintainershiplioux2004-06-241-1/+1 * Fix MASTER_SITES:vs2004-06-231-2/+2 * Add ariadne 1.3, programs to compare protein sequences andkrion2004-06-225-0/+60 * Set an expiry date of 2004-08-20 for these BROKEN/IGNORE/FORBIDDENkris2004-06-222-1/+5 * BROKEN: Checksum mismatchkris2004-06-201-0/+2 * Replace explicit imake dependency with USE_IMAKE=yesanholt2004-06-181-5/+1 * Update to 20040613 releaselioux2004-06-132-3/+3 * - Remove obsolete MASTER_SITESkrion2004-06-081-2/+1 * - Update MASTER_SITESpav2004-06-021-3/+3 * [PATCH] biology/mopac patchsite fixedwin2004-06-011-1/+1 * [PATCH] biology/mopac distsite fixedwin2004-06-011-1/+1 * [PATCH] biology/gff2ps distsite fixedwin2004-06-011-3/+3 * - Update WWWpav2004-05-301-1/+1 * - Fix MASTER_SITESkrion2004-05-231-4/+1 * - Remove long time unresponsive MASTER_SITEpav2004-05-221-1/+0 * - Update MASTER_SITES and WWW: linekrion2004-05-222-2/+2 * Add forgotten patches...thierry2004-05-214-2/+62 * BROKEN: Broken pkg-plistkris2004-05-211-0/+2 * unbreak, only minor changes in the distfiles (see PR)eik2004-05-182-8/+7 * Add a missing BUILD_DEPENDS.thierry2004-05-111-0/+1 * Upgrade to 2.0b7 and unbreak.thierry2004-05-117-113/+128 * Fix MASTER_SITESmarkus2004-05-091-1/+1 * Make portlint happy by replacing space to tabmaho2004-05-072-4/+4 * - update to 4.5.3petef2004-05-026-17/+235 * - Honor CFLAGSkrion2004-04-161-1/+1 * BROKEN: Checksum mismatchkris2004-04-121-0/+2 * Mark this port BROKEN with gtk+-2.4.marcus2004-04-111-0/+2 * Tidy up whitespace.trevor2004-04-112-6/+6 * Trim whitespace.trevor2004-04-112-66/+66 * Add openbabel dependency (bento log forwarded by kris).trevor2004-04-091-0/+2 * Update to 1.7.8.trevor2004-04-083-16/+16 * After patching, remove the carriage-return characters from povchem.ctrevor2004-04-071-0/+2 * Chase home page.trevor2004-04-071-1/+1 * Fix build with gtk 2.4.adamw2004-04-051-1/+6 * Chase the glib20 update, and bump all affected ports' PORTREVISIONs.marcus2004-04-054-3/+4 * Remove category pkg/COMMENT files in favour of a COMMENT variable in thekris2004-04-022-1/+2 * SIZEify (maintainer timeout)trevor2004-03-3134-0/+38 * Add SIZE data.knu2004-03-221-0/+1 * Do not hardcord PICFLAGmaho2004-03-201-7/+1 * Backout previous change of PICFLAG, sincemaho2004-03-191-0/+6 * -fPIC is appropreate on all architectures.maho2004-03-191-6/+0 * Add size data, approved by maintainers.trevor2004-03-191-0/+1 * 1) Silent version up without changing the version numbermaho2004-03-183-6/+6 * Add size data.trevor2004-03-181-0/+1 * SIZEify.trevor2004-03-182-0/+2 * 1) update to 0.9.3maho2004-03-175-11/+44 * Whoa there, boy, that's a mighty big commit y'all have there...ade2004-03-141-1/+1 * - Update to version 2003.09.21krion2004-03-124-15/+9 * Insert "-l" into PATCH_ARGS, to cause the "patch" command to ignoretrevor2004-03-091-0/+1 * Add MD5 of 2004-01-06 version of povchem.c. Its contents aretrevor2004-03-091-1/+1 * Unmark as broken for 4.x; instead, mark as ignore for perl < 5.6.linimon2004-03-081-2/+2 * BROKEN on amd64 and ia64: Does not compile (missing -fPIC)kris2004-03-071-1/+7 * Maintainer reports being unable to look after this port any longer.linimon2004-03-071-1/+1 * - Update to version 0.4krion2004-02-282-3/+3 * - Fix MASTER_SITESkrion2004-02-281-1/+1 * Update to 20040226 releaselioux2004-02-273-3/+10 * BROKEN on alpha: Does not compilekris2004-02-231-1/+7 * BROKEN on alpha 5.x: does not compilekris2004-02-231-1/+7 * BROKEN: Checksum mismatchkris2004-02-221-0/+2 * BROKEN on 4.x: Configure failskris2004-02-221-1/+7 * BROKEN: Does not fetchkris2004-02-221-0/+2 * BROKEN: Checksum mismatchkris2004-02-221-0/+2 * Upgrade to 1.23.des2004-02-106-1001/+1125 * USE_SIZEifylioux2004-02-082-0/+2 * Correct whitespace in COMMENTkris2004-02-071-1/+1 * Use PLIST_FILES (bento-tested, marcus-reviewed).trevor2004-02-0610-5/+5 * Use PLIST_FILES.trevor2004-02-062-1/+1 * Bump PORTREVISION on all ports that depend on gettext to aid with upgrading.marcus2004-02-0417-5/+17 * - Fix build on AMD64krion2004-02-022-2/+41 * - Update to 3.6.bpav2004-02-012-4/+3 * - Update to version 2003.11.25krion2004-01-292-2/+2 * Add SIZE.trevor2004-01-289-0/+11 * Yet another C++ fix.naddy2004-01-261-1/+9 * Use the CPIO macro defined in bsd.port.mk.trevor2004-01-221-1/+1 * Major update from 0.7.2 to 1.4 by new maintainer. This is almost a completelinimon2004-01-216-405/+1689 * silent updates of archives:maho2003-12-283-4/+8 * - Fix MASTER_SITESkrion2003-12-201-1/+1 * Mark as broken on 5.x due to the usual gcc terminating-character hassles.linimon2003-12-191-1/+7 * - Update to last snapshotpav2003-12-072-9/+6 * - Update checksum again, seems author removes .ps version of documentationpav2003-11-224-467/+31 * Define USE_PERL5_BUILD, not erroneous USE_PERL.trevor2003-11-202-2/+2 * Define USE_PERL to make Perl available for (mostly deprecated)trevor2003-11-202-0/+2 * - Unbreak on 5.xpav2003-11-203-7/+54 * - Update to new version 2003.11.17krion2003-11-176-66/+17 * unPERLify by using REINPLACE_CMD and SED where appropriate.marcus2003-11-162-3/+1 * Switch to wxgtk2.fjoe2003-11-141-1/+2 * Use the FIND and XARGS macros introduced in bsd.port.mk 1.391.trevor2003-11-133-3/+3 * Remove my e-mail address from comment blocks of portstrevor2003-11-131-1/+1 * wxgtk-devel -> wxgtkfjoe2003-11-101-1/+2 * - Switch to wxgtk2fjoe2003-11-101-7/+9 * LIB_DEPENDS on libglut for libglut rather than soon-to-disappear Mesa3.anholt2003-11-081-1/+1 * Update to 2.0.7.adamw2003-11-083-4/+7 * Mark BROKEN: distfile has changed.anholt2003-11-071-0/+2 * ${MASTER_SITES} are slow. This patch adds a mirror site to helpjeh2003-11-061-1/+2 * Make this port use wxgtk 2.4.2.fjoe2003-11-053-7/+19 * Chase wxgtk library name (and version) change.fjoe2003-11-051-1/+1 * Pet portlint.linimon2003-11-041-1/+1 * Date: Tue, 04 Nov 2003 00:42:55 +0900edwin2003-11-041-1/+1 * Mark BROKEN (see bento logs). These ports are scheduled for removalkris2003-11-031-1/+1 * ports with possibly unreachable MAINTAINERsedwin2003-11-022-2/+2 * Chased new mastersite per distfile survey. Notified maintainer.linimon2003-10-261-1/+1 * utilize SITE_PERLijliao2003-10-244-387/+385 * Respect CC and CFLAGSkris2003-10-231-5/+11 * Cosmetic fix: use %%DOCSDIR%% macro.osa2003-10-2231-1259/+1259 * - Update to 0.5.2krion2003-10-213-297/+298 * Don't remove share/java/classes system directory.kris2003-10-191-1/+0 * Fixes the checksum problem, but doesn't fix the port; adds a BROKENlinimon2003-10-162-2/+3 * Update to 0.5.3.knu2003-10-153-2/+4 * update biology/nab: 4.5.1 -> 4.5.2daichi2003-10-145-20/+38 * BROKEN: Broken pkg-plistkris2003-10-131-0/+2 * BROKEN: Does not fetchkris2003-10-131-0/+2 * Port update (maintainer): biology/wiseedwin2003-09-242-2/+2 * Make portlint(1) happy by changing strip to ${STRIP_CMD}osa2003-09-242-2/+2 * Update port: biology/gperiodic to 2.0.6edwin2003-09-083-4/+5 * new port:biology/lsysexpedwin2003-09-035-0/+71 * Silent changes to the port distfile which *not* have significantmaho2003-09-021-2/+2 * - Add an end-of-string to each line of the inputkrion2003-08-281-7/+7 * Update to 0.5.2.knu2003-08-233-2/+13 * Fix build on python2.3perky2003-08-201-1/+6 * o Main modificationnork2003-08-192-9/+7 * As announced on May 6, remove the broken p5-bioperl-devel port.kris2003-08-088-686/+0 * BROKEN: Checksum mismatchkris2003-08-071-0/+2 * Fix python version detection routines to cope with python 2.3'sperky2003-08-021-1/+1 * Somehow pkg-plist is removed...maho2003-08-011-0/+128 * a) Update to 1.7.3maho2003-08-013-84/+18 * Add USE_XLIB=yes to compilemaho2003-07-311-0/+1 * Update to 0.5.1.knu2003-07-292-2/+2 * A new port garlic, free molecular viewer and editor, free molecularmaho2003-07-286-0/+399 * - Update to version 2.0.5krion2003-07-285-41/+25 * Some clean-up.maho2003-07-261-17/+14 * Duplicated the `pre-extract:' and `post-build:'maho2003-07-261-9/+0 * a) Some corrupts with Makefile and pkg-plist.maho2003-07-252-12/+26 * a) Forgot to update distinfo 52498maho2003-07-255-33/+69 * Update to 0.90maho2003-07-244-309/+328 * enhancement, build and install the opengl viewer, moldenogl.maho2003-07-194-74/+64 * honor CFLAGS and FFLAGSmaho2003-07-192-3/+4 * Maintainer update of biology/tinker port to version 4.0.maho2003-07-195-20/+42 * Add semi-colons(;) after declare statements that go in the povray scene fileleeym2003-07-14