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# New ports collection makefile for: p5-bioperl-devel
# Date created: 13 August 2001
# Whom: Johann Visagie <wjv@FreeBSD.org>
#
# $FreeBSD$
#
PORTNAME= bioperl
PORTVERSION= 0.9.0
CATEGORIES= biology perl5
MASTER_SITES= ftp://bioperl.org/pub/DIST/ \
http://bioperl.org/Core/Latest/
PKGNAMEPREFIX= p5-
PKGNAMESUFFIX= -devel
DISTFILES= ${DISTNAME}${EXTRACT_SUFX}
MAINTAINER= wjv@FreeBSD.org
# These are all run-time dependencies, but listing them in ${BUILD_DEPENDS}
# prevents a flood of build-time warnings.
BUILD_DEPENDS= ${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/${PERL_ARCH}/Ace.pm:${PORTSDIR}/biology/p5-AcePerl \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/${PERL_ARCH}/XML/Parser.pm:${PORTSDIR}/textproc/p5-XML-Parser \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/File/Temp.pm:${PORTSDIR}/devel/p5-File-Temp \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/HTTP/Request/Common.pm:${PORTSDIR}/www/p5-libwww \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/IO/Scalar.pm:${PORTSDIR}/devel/p5-IO-stringy \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/IO/String.pm:${PORTSDIR}/devel/p5-IO-String \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/LWP/UserAgent.pm:${PORTSDIR}/www/p5-libwww \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/XML/Node.pm:${PORTSDIR}/textproc/p5-XML-Node \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/XML/Parser/PerlSAX.pm:${PORTSDIR}/textproc/p5-libxml \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/XML/Twig.pm:${PORTSDIR}/textproc/p5-XML-Twig \
${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/XML/Writer.pm:${PORTSDIR}/textproc/p5-XML-Writer
RUN_DEPENDS= ${BUILD_DEPENDS}
PERL_CONFIGURE= YES
NO_LATEST_LINK= "Unstable development version."
.if defined(WITH_CORBA)
WITH_CORBA_CLIENT= YES
WITH_CORBA_SERVER= YES
.endif
EXT_VERSION= 0.6
CORBA_CLIENT_VERSION= 0.2
CORBA_SERVER_VERSION= 0.2
GUI_VERSION= 0.7
DISTFILES+= bioperl-ext-${EXT_VERSION}${EXTRACT_SUFX}
EXT_WRKSRC= ${WRKDIR}/bioperl-ext-06/Bio/Ext/Align
.if defined(WITH_CORBA_CLIENT)
BUILD_DEPENDS+= ${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/${PERL_ARCH}/CORBA/ORBit.pm:${PORTSDIR}/devel/p5-ORBit
RUN_DEPENDS+= ${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/${PERL_ARCH}/CORBA/ORBit.pm:${PORTSDIR}/devel/p5-ORBit
.endif
.if defined(WITH_CORBA_SERVER)
BUILD_DEPENDS+= ${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/${PERL_ARCH}/CORBA/ORBit.pm:${PORTSDIR}/devel/p5-ORBit
RUN_DEPENDS+= ${LOCALBASE}/lib/perl5/site_perl/${PERL_VER}/${PERL_ARCH}/CORBA/ORBit.pm:${PORTSDIR}/devel/p5-ORBit
.endif
.if defined(WITH_GUI)
RUN_DEPENDS+= ptksh:${PORTSDIR}/x11-toolkits/p5-Tk
.endif
.for ext in CORBA_CLIENT CORBA_SERVER GUI
.if defined(WITH_${ext})
EXTLIST+= ${ext}
DISTFILES+= bioperl-${ext:L:S/_/-/}-${${ext}_VERSION}${EXTRACT_SUFX}
${ext}_WRKSRC= ${WRKDIR}/bioperl-${ext:L:S/_/-/}
PLIST_${ext}= ""
.else
PLIST_${ext}= "@comment "
.endif
PLIST_SUB+= PLIST_${ext}=${PLIST_${ext}}
.endfor
.include <bsd.port.pre.mk>
# Include the (extremely) long list of manpages from a separate file:
.include "${FILESDIR}/Makefile.man"
MANPREFIX= ${PREFIX}/lib/perl5/${PERL_VERSION}
pre-fetch:
.if !defined(BATCH) && (!defined(WITH_CORBA_CLIENT) || \
!defined(WITH_CORBA_SERVER) || !defined(WITH_GUI))
@ ${CAT} ${FILESDIR}/ext.msg
.endif
post-configure:
@ cd ${EXT_WRKSRC} && \
${SETENV} ${CONFIGURE_ENV} \
${PERL5} ./${CONFIGURE_SCRIPT} ${CONFIGURE_ARGS}
.for ext in ${EXTLIST}
@ cd ${${ext}_WRKSRC} && \
${PERL5} ./${CONFIGURE_SCRIPT} ${CONFIGURE_ARGS}
.endfor
post-build:
@ cd ${EXT_WRKSRC} && \
${MAKE} ${MAKE_FLAGS} ${MAKEFILE} ${MAKE_ARGS} ${ALL_TARGET}
.for ext in ${EXTLIST}
@ cd ${${ext}_WRKSRC} && ${SETENV} ${MAKE_ENV} \
${MAKE} ${MAKE_FLAGS} ${MAKEFILE} ${MAKE_ARGS} ${ALL_TARGET}
.endfor
post-install:
@ cd ${EXT_WRKSRC} && \
${SETENV} ${MAKE_ENV} ${MAKE} ${MAKE_FLAGS} \
${MAKEFILE} ${MAKE_ARGS} ${INSTALL_TARGET}
.for ext in ${EXTLIST}
@ cd ${${ext}_WRKSRC} && \
${SETENV} ${MAKE_ENV} ${MAKE} ${MAKE_FLAGS} \
${MAKEFILE} ${MAKE_ARGS} ${INSTALL_TARGET}
.endfor
.include <bsd.port.post.mk>
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