path: root/math/R/Makefile

# Created by: Maurice Castro <maurice@serc.rmit.edu.au>
# $FreeBSD$

PORTNAME?=  R
PORTVERSION=    3.0.2
PORTREVISION=   2
CATEGORIES= math lang
MASTER_SITES=   http://cran.r-project.org/%SUBDIR%/ \
        ftp://cran.r-project.org/pub/R/%SUBDIR%/ \
        http://cran.at.r-project.org/%SUBDIR%/ \
        http://cran.au.r-project.org/%SUBDIR%/ \
        http://cran.br.r-project.org/%SUBDIR%/ \
        http://cran.ch.r-project.org/%SUBDIR%/ \
        http://cran.es.r-project.org/%SUBDIR%/ \
        http://cran.dk.r-project.org/%SUBDIR%/ \
        http://cran.uk.r-project.org/%SUBDIR%/ \
        http://cran.us.r-project.org/%SUBDIR%/ \
        ftp://ftp.u-aizu.ac.jp/pub/lang/R/CRAN/%SUBDIR%/ \
        http://lib.stat.cmu.edu/R/CRAN/%SUBDIR%/ \
        http://cran.stat.ucla.edu/%SUBDIR%/ \
        http://probability.ca/cran/%SUBDIR%/
MASTER_SITE_SUBDIR= src/base/R-${PORTVERSION:C|\..*||}
DISTNAME=   R-${PORTVERSION}

PATCH_SITES=        ${MASTER_SITE_LOCAL}
PATCH_SITE_SUBDIR=  bf
PATCHFILES=     R-patched-20131112-r64207.diff.bz2

MAINTAINER= bf@FreeBSD.org
COMMENT?=   A language for statistical computing and graphics

LICENSE=    GPLv2

BUILD_DEPENDS=      ${LOCALBASE}/bin/gsed:${PORTSDIR}/textproc/gsed

CONFIGURE_ENV=      LIBR_LDFLAGS="${LDFLAGS}" OBJC="${CC}" \
            SED="${LOCALBASE}/bin/gsed" \
            ac_cv_have_decl_powl=yes ac_cv_have_decl_log1pl=yes

OPTIONS_DEFINE=     MISSING

MISSING_DESC=       use libmissing rather than libquadmath

.if defined(LIBRMATH_SLAVEPORT)
BUILD_WRKSRC=       ${WRKSRC}/src/nmath/standalone
CONFIGURE_ARGS=     --disable-nls --with-ICU=no --with-cairo=no \
            --with-jpeglib=no --with-libpng=no --with-libtiff=no \
            --with-readline=no --with-tcltk=no --with-x=no \
            --without-libintl-prefix
CONFIGURE_ENV+=     ac_cv_header_iconv_h=no
PLIST_SUB=      RMATH_SOVERSION="${RMATH_SOVERSION}"
USE_LDCONFIG=       yes
.else # LIBRMATH_SLAVEPORT
ALL_TARGET=     all
INSTALL_TARGET =    install
CONFIGURE_ARGS =    --enable-memory-profiling rdocdir=${DOCSDIR} \
            --with-system-bzlib --with-system-zlib
CONFIGURE_ENV+=     FCFLAGS="${FFLAGS}" \
            INSTALL_DATA="${INSTALL} ${COPY} ${_SHROWNGRP} -m 644" \
            R_LD_LIBRARY_PATH="${R_LD_LIBRARY_PATH}" TAR="${TAR}"
CPPFLAGS+=      -I${LOCALBASE}/include
LDFLAGS+=       -L${LOCALBASE}/lib

OPTIONS_DEFINE+=    ATLAS ICU PCRE_PORT THREADS

ATLAS_DESC=     Use ATLAS instead of BLAS/LAPACK
ICU_DESC=       Use ICU for collation in multibyte locales
PCRE_PORT_DESC =    Use devel/pcre instead of the bundled PCRE

OPTIONS_DEFAULT+=   ICU PCRE_PORT THREADS
.if !defined(LIBR_SLAVEPORT)
RUN_DEPENDS+=       ${LOCALBASE}/bin/gsed:${PORTSDIR}/textproc/gsed
USE_LDCONFIG=       ${PREFIX}/lib/R/lib
#now only used to build the R.1 manpage:
USES+=          perl5
USE_PERL5=      build

OPTIONS_DEFINE+=    GHOSTSCRIPT INFO_MANUALS JPEG LETTER_PAPER LIBR \
            PANGOCAIRO PDF_MANUALS PNG TCLTK TIFF X11

GHOSTSCRIPT_DESC=   [dev2]bitmap() graphics devices
INFO_MANUALS_DESC=  GNU info manuals
JPEG_DESC=      jpeg() graphics device
LETTER_PAPER_DESC=  US Letter paper
LIBR_DESC=      R shared library and a dynamically-linked R
PANGOCAIRO_DESC=    cairo and pango graphics support
PDF_MANUALS_DESC=   PDF manuals (requires TeX)
PNG_DESC=       png() graphics device
TCLTK_DESC=     tcltk package
X11_DESC=       X11() graphics device

OPTIONS_DEFAULT+=   GHOSTSCRIPT INFO_MANUALS JPEG LIBR PANGOCAIRO PNG \
            TCLTK TIFF X11

.endif # !LIBR_SLAVEPORT
PLIST_SUB=      R_SOVERSION="${R_SOVERSION}" \
            RBLAS_SOVERSION="${RBLAS_SOVERSION}" \
            RLAPACK_SOVERSION="${RLAPACK_SOVERSION}"
R_LD_LIBRARY_PATH=  ${_GCC_RUNTIME}:${LOCALBASE}/lib
USES+=          iconv
.endif # LIBRMATH_SLAVEPORT
GNU_CONFIGURE=      yes
MAKE_JOBS_UNSAFE=   yes
R_SOVERSION=        1
RBLAS_SOVERSION=    2
RLAPACK_SOVERSION=  4
RMATH_SOVERSION=    0
USES+=          fortran
USE_GCC=        yes

.include <bsd.port.options.mk>

.if ${ARCH} == "sparc64" || ${ARCH} == "powerpc64"
PICFLAG?=       -fPIC
.else
PICFLAG?=       -fpic
.endif
.for flag in LD CXXLD
CONFIGURE_ENV +=    SHLIB_${flag}FLAGS="${PICFLAG}"
.endfor

.if ${OSVERSION} > 1000052 && \
(${ARCH} == amd64 || ${ARCH} == i386 || ${ARCH} == ia64 || ${ARCH} == pc98 || ${ARCH} == sparc64)
.for _f in coshl erfcl erfl lgammal powl sinhl tanhl tgammal
CFLAGS+=    -fno-builtin-${_f}
LDFLAGS+=   -fno-builtin-${_f}
.endfor
.endif

.if ${PORT_OPTIONS:MMISSING}
.for _f in acos asin atan cos cosh exp log pow sin sinh tan tanh
CONFIGURE_ENV+=     ac_cv_have_decl_c${_f}=yes
.endfor
LIB_DEPENDS+=       libmissing.so:${PORTSDIR}/math/libmissing
LIBM=           -L${LOCALBASE}/lib -lmissing -lm
LIBMH=          "missing_math.h"
.if defined(LIBRMATH_SLAVEPORT)
CPPFLAGS+=      -I${LOCALBASE}/include
.endif
.else
LIBM=           -lquadmath -lm
LIBMH=          <quadmath.h>
.endif

.if !defined(LIBRMATH_SLAVEPORT)
.if ${PORT_OPTIONS:MATLAS}
LIB_DEPENDS+=       libatlas.so:${PORTSDIR}/math/atlas
BLAS?=          ${LIBM} -lf77blas
LAPACK?=        ${LIBM} -lalapack -lcblas
.else
BLAS?=          no
LAPACK?=        no
.endif
CONFIGURE_ARGS+=    --with-blas="${BLAS}" --with-lapack="${LAPACK}"
.if ${BLAS} == "no" || ${LAPACK} == "no"
PLIST_SUB+=     LAPACK=""
.else
PLIST_SUB+=     LAPACK="@comment "
.endif

.if ${PORT_OPTIONS:MICU}
LIB_DEPENDS+=       libicui18n.so:${PORTSDIR}/devel/icu
CONFIGURE_ARGS+=    --with-ICU
.else
CONFIGURE_ARGS+=    --without-ICU
.endif

.if ${PORT_OPTIONS:MNLS}
USES+=          gettext
PLIST_SUB+=     NLS=""
.else
CONFIGURE_ARGS+=    --disable-nls
PLIST_SUB+=     NLS="@comment "
.endif

.if ${PORT_OPTIONS:MPCRE_PORT}
LIB_DEPENDS+=       libpcre.so:${PORTSDIR}/devel/pcre
CONFIGURE_ARGS+=    --with-system-pcre
.else
CONFIGURE_ARGS+=    --without-system-pcre
.endif

.if ${PORT_OPTIONS:MTHREADS}
CONFIGURE_ARGS+=    --enable-threads=posix
.else
CONFIGURE_ARGS+=    --disable-threads
.endif

.if defined(LIBR_SLAVEPORT)

CONFIGURE_ARGS+=    --disable-BLAS-shlib --without-pic --without-x

.else # LIBR_SLAVEPORT

.if ${PORT_OPTIONS:MGHOSTSCRIPT}
USE_GHOSTSCRIPT_RUN=    yes
.endif

.if ${PORT_OPTIONS:MJPEG}
LIB_DEPENDS+=       libjpeg.so:${PORTSDIR}/graphics/jpeg
CONFIGURE_ARGS+=    --with-jpeglib
.else
CONFIGURE_ARGS+=    --without-jpeglib
.endif

.if ${PORT_OPTIONS:MLETTER_PAPER}
CONFIGURE_ENV +=    R_PAPERSIZE=letter
.endif

.if ${PORT_OPTIONS:MLIBR}
CONFIGURE_ARGS+=    --enable-R-shlib
PLIST_SUB+=     LIBR=""
.else
PLIST_SUB+=     LIBR="@comment "
.endif

.if ${PORT_OPTIONS:MPANGOCAIRO}
USES+=          pkgconfig
USE_GNOME+=     pango
PLIST_SUB+=     PANGOCAIRO=""
.else
CONFIGURE_ARGS+=    --without-cairo
PLIST_SUB+=     PANGOCAIRO="@comment "
.endif

.if ${PORT_OPTIONS:MPNG}
LIB_DEPENDS+=       libpng15.so:${PORTSDIR}/graphics/png
CONFIGURE_ARGS+=    --with-libpng
.else
CONFIGURE_ARGS+=    --without-libpng
.endif

.if ${PORT_OPTIONS:MTCLTK}
USES+=          tk:84+
CONFIGURE_ARGS+=    --with-tcltk \
            --with-tcl-config=${TCL_LIBDIR}/tclConfig.sh \
            --with-tk-config=${TK_LIBDIR}/tkConfig.sh
PLIST_SUB+=     TCLTK=""
.else
CONFIGURE_ARGS+=    --without-tcltk
PLIST_SUB+=     TCLTK="@comment "
.endif

.if ${PORT_OPTIONS:MTIFF}
LIB_DEPENDS+=       libtiff.so:${PORTSDIR}/graphics/tiff
CONFIGURE_ARGS+=    --with-libtiff
.else
CONFIGURE_ARGS+=    --without-libtiff
.endif

.if ${PORT_OPTIONS:MX11}
CONFIGURE_ARGS+=    --with-x
USE_XORG=       x11 xmu xt
PLIST_SUB+=     X11=""
.else
CONFIGURE_ARGS+=    --without-x
PLIST_SUB+=     X11="@comment "
.endif

.if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS}
ALL_TARGET+=    info
INFO=       R-FAQ R-admin R-data R-exts R-intro R-lang
.endif

.if ${PORT_OPTIONS:MPDF_MANUALS} && ${PORT_OPTIONS:MDOCS}
USE_TEX=        texlive dvipsk kpathsea pdftex
BUILD_DEPENDS +=    texi2dvi:${PORTSDIR}/print/texinfo
ALL_TARGET+=        pdf
CONFIGURE_ENV +=    INSTALL_INFO="${LOCALBASE}/bin/install-info" \
            MAKEINFO="${LOCALBASE}/bin/makeinfo"
INSTALL_TARGET+=    install-pdf
PLIST_SUB+=     PDF_MANUAL=""
.else
.for _b in KPSEWHICH MAKEINDEX PDFLATEX PDFTEX TEX TEXI2DVI
CONFIGURE_ENV+=     ac_cv_path_${_b}=""
.endfor
PLIST_SUB+=     PDF_MANUAL="@comment "
.endif
.endif # LIBR_SLAVEPORT
.endif # !LIBRMATH_SLAVEPORT

post-patch:
    @${REINPLACE_CMD} -e '\|LIBS=|s|-lrt ||' \
        -e '\|-lm[". ]|s|-lm|${LIBM}|' \
        ${WRKSRC}/configure
.if !${PORT_OPTIONS:MMISSING}
.if ${OSVERSION} < 1000016
    @${REINPLACE_CMD} -e 's/# define EXP expl/# define EXP(x) (long double)expq((__float128)(x))/' \
        ${WRKSRC}/src/nmath/pnchisq.c
.endif
.if ${OSVERSION} < 1000034
    @${REINPLACE_CMD} -Ee 's/(log)(1p)?l\(/(long double)\1\2q((__float128)/' \
        ${WRKSRC}/src/nmath/dnbeta.c \
        ${WRKSRC}/src/nmath/pnbeta.c
.endif
    @${REINPLACE_CMD} -Ee 's/powl\((.*)(long double)/(long double)powq((__float128)\1__float128/' \
        ${WRKSRC}/src/main/format.c
.else
.if ${OSVERSION} > 1000052 && \
(${ARCH} == amd64 || ${ARCH} == i386 || ${ARCH} == ia64 || ${ARCH} == pc98 || ${ARCH} == sparc64)
    @${REINPLACE_CMD} -e '\|^FLIBS="$$ac_cv_f77_libs"|s|"|&${LIBM} |' \
        ${WRKSRC}/configure
.endif
    @${REINPLACE_CMD} -e \
    '\|#[[:blank:]]*include[[:blank:]]*<complex.h>|{x;s|^.*$$|#include "missing_complex.h"|;H;x;}' \
        ${WRKSRC}/src/main/complex.c
.endif
    @${REINPLACE_CMD} -e \
    '\|#[[:blank:]]*include[[:blank:]]*<math.h>|{x;s|^.*$$|#include ${LIBMH}|;H;x;}' \
        ${WRKSRC}/src/nmath/nmath.h \
        ${WRKSRC}/src/include/Rmath.h0.in
    @${REINPLACE_CMD} -e 's|(libdir)/pkgconfig|(prefix)/libdata/pkgconfig|g' \
        ${WRKSRC}/src/nmath/standalone/Makefile.in \
        ${WRKSRC}/src/unix/Makefile.in
    @${REINPLACE_CMD} -e "s|-lpthread|${PTHREAD_LIBS}|g" \
        ${WRKSRC}/configure \
        ${WRKSRC}/src/scripts/javareconf.in
    @${REINPLACE_CMD} -e "s|/usr/local|${LOCALBASE}|g" \
        ${WRKSRC}/configure \
        ${WRKSRC}/src/library/profile/Rprofile.unix \
        ${WRKSRC}/src/scripts/javareconf.in
.if !defined(LIBRMATH_SLAVEPORT)
.if !${PORT_OPTIONS:MNLS}
    @(cd ${WRKSRC}/src/library/Recommended; \
    for tarfile in *.tgz *.tar.gz ; do \
    ${TAR} -czf temptgz --exclude='*/po/*' @$$tarfile ; \
    ${MV} temptgz $$tarfile ; \
    done)
    @${REINPLACE_CMD} -e '/ls -d $$(srcdir)\/inst/d' \
        ${WRKSRC}/src/library/translations/Makefile.in
.endif

.if !${PORT_OPTIONS:MMISSING}
pre-configure:
    @if [ ! -f ${_GCC_RUNTIME}/libquadmath.a ] ; then \
    ${PRINTF} "\n\n\n%s\n\n\n" "libquadmath is not available for your\
    compiler and architecture: please enable the MISSING option." ; \
    exit 1 ; fi
.endif

.if defined(LIBR_SLAVEPORT)
do-build:
.for d in include extra
    @(cd ${WRKSRC}/src/${d}; ${SETENV} ${MAKE_ENV} ${MAKE} ${_MAKE_JOBS} \
    ${MAKE_ARGS} R)
.endfor
    @(cd ${WRKSRC}/src/main; ${SETENV} ${MAKE_ENV} ${MAKE} ${_MAKE_JOBS} \
    ${MAKE_ARGS} Makefile Makedeps libR.a)

do-install:
    @${MKDIR} ${STAGEDIR}${PREFIX}/lib/R/lib
    @${INSTALL_LIB} ${WRKSRC}/src/main/libR.a ${STAGEDIR}${PREFIX}/lib/R/lib

.else # LIBR_SLAVEPORT

pre-configure-script:
    @${FIND} ${WRKSRC} \( -name '*.orig' -o -name '*.bak' \) -delete

check regression-test test: build
    @(cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} LANGUAGE=en \
    LC_COLLATE=C LC_TIME=C ${MAKE} ${_MAKE_JOBS} ${MAKE_ARGS} \
    check)

check-all: build
    @(cd ${WRKSRC}; ${SETENV} ${MAKE_ENV} LANGUAGE=en \
    LC_COLLATE=C LC_TIME=C ${MAKE} ${_MAKE_JOBS} ${MAKE_ARGS} \
    check-all)

post-install:
.for L in R Rblas Rlapack
    @(cd ${STAGEDIR}${PREFIX}/lib/R/lib; if [ -f lib${L}.so ] ; then \
    ${LN} -sf lib${L}.so lib${L}.so.${${L:U}_SOVERSION} ; fi)
.endfor
.if ${PORT_OPTIONS:MINFO_MANUALS} && ${PORT_OPTIONS:MDOCS}
    @(cd ${WRKSRC}/doc/manual; \
    for infofile in ${INFO}; do \
        ${INSTALL_DATA} $${infofile}.info* ${STAGEDIR}${PREFIX}/${INFO_PATH}/; \
    done)
.endif

.endif # LIBR_SLAVEPORT
.else # !LIBRMATH_SLAVEPORT
do-install:
    @${INSTALL_DATA} ${WRKSRC}/src/include/Rmath.h ${STAGEDIR}${PREFIX}/include
    @${INSTALL_DATA} ${BUILD_WRKSRC}/libRmath.a ${STAGEDIR}${PREFIX}/lib
    @${INSTALL_LIB} ${BUILD_WRKSRC}/libRmath.so \
    ${STAGEDIR}${PREFIX}/lib/libRmath.so.${RMATH_SOVERSION}
    @(cd ${STAGEDIR}${PREFIX}/lib; ${LN} -sf libRmath.so.${RMATH_SOVERSION} libRmath.so)

check regression-test test: build
    @(cd ${BUILD_WRKSRC}; ${SETENV} ${MAKE_ENV} LANGUAGE=en \
    LC_COLLATE=C LC_TIME=C ${MAKE} ${_MAKE_JOBS} ${MAKE_ARGS} test; \
    ${SETENV} LD_LIBRARY_PATH="${BUILD_WRKSRC}" ${BUILD_WRKSRC}/test)

.endif # !LIBRMATH_SLAVEPORT

.include <bsd.port.mk>