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# vim: tabstop=8 softtabstop=0 noexpandtab
# Ports collection Makefile for: jags
# Date created: 21 April 2004
# Whom: Eric van Gyzen <vangyzen@stat.duke.edu>
#
# $FreeBSD$
#
PORTNAME= mcmc-jags
PORTVERSION= 2.2.0
CATEGORIES= math
MASTER_SITES= SF:1,2,3
MASTER_SITE_SUBDIR= ${PORTNAME}/JAGS/2.x/Source/:1 \
${PORTNAME}/Examples/2.x/:2 \
${PORTNAME}/Manuals/2.x/:3
DISTFILES= ${DISTNAME:S/mcmc-//:U}${EXTRACT_SUFX}:1
.if !defined(NOPORTDOCS)
DISTFILES+= classic-bugs.tar.gz:2 jags_developer_manual.pdf:3 \
jags_installation_manual.pdf:3 jags_user_manual.pdf:3
EXTRACT_ONLY= ${DISTNAME:S/mcmc-//:U}${EXTRACT_SUFX}
.endif
MAINTAINER= bf@FreeBSD.org
COMMENT= Just Another Gibbs Sampler
OPTIONS= ATLAS "use ATLAS libraries instead of BLAS and LAPACK" off
DIST_SUBDIR= ${PORTNAME}
WRKSRC= ${WRKDIR}/${PKGNAME:S/mcmc-//:U}
GNU_CONFIGURE= yes
CPPFLAGS+= -I${LOCALBASE}/include
LDFLAGS+= -L${LOCALBASE}/lib
CONFIGURE_ENV= LDFLAGS="${LDFLAGS}"
USE_FORTRAN= yes
USE_LDCONFIG= yes
USE_BISON= build
PLIST_SUB= PORTVERSION=${PORTVERSION}
MAN1= jags.1
.include <bsd.port.options.mk>
.if defined(WITH_ATLAS)
LIB_DEPENDS+= atlas.2:${PORTSDIR}/math/atlas
CONFIGURE_ARGS= --with-lapack=-lalapack --with-blas=-lf77blas
.else
LIB_DEPENDS+= blas.2:${PORTSDIR}/math/blas
LIB_DEPENDS+= lapack.4:${PORTSDIR}/math/lapack
CONFIGURE_ARGS= --with-lapack=-llapack --with-blas=-lblas
.endif
post-patch:
@${REINPLACE_CMD} -e 's|[(]libdir[)]/pkgconfig|(prefix)/libdata/pkgconfig|g' \
${WRKSRC}/etc/Makefile.in
@${REINPLACE_CMD} \
-e '/@WINDOWS_FALSE@bin_SCRIPTS =/s/jags/mcmc-&/' \
-e '/CLEANFILES =/s/jags/mcmc-&/' \
-e '/@WINDOWS_FALSE@jags:/s/jags/mcmc-&/' \
-e '/@WINDOWS_FALSE@.*rm -f jags/s/jags/mcmc-&/' \
-e '/@WINDOWS_FALSE@.*mv jags.tmp jags/s/jags/mcmc-&/2' \
${WRKSRC}/src/terminal/Makefile.in
post-install:
.if !defined(NOPORTDOCS)
@${MKDIR} ${DOCSDIR}
.for _M in developer installation user
@${INSTALL_DATA} ${DISTDIR}/${DIST_SUBDIR}/jags_${_M}_manual.pdf \
${DOCSDIR}
.endfor
.endif
.if !defined(NOPORTEXAMPLES)
@${MKDIR} ${EXAMPLESDIR}
@( cd ${EXAMPLESDIR}; \
${PAX} -rzf ${DISTDIR}/${DIST_SUBDIR}/classic-bugs.tar.gz \
-s ':^classic-bugs/*::' )
@${SED} -i '' \
-e '\|JAGS ?=|{s|jags|mcmc-&|;s|/usr/local|${PREFIX}|;}' \
${EXAMPLESDIR}/vol[12]/Makefile
@${ECHO_MSG} ""
@${CAT} ${PKGMESSAGE}
@${ECHO_MSG} ""
.endif
.if defined(MAINTAINER_MODE)
RUN_DEPENDS+= ${LOCALBASE}/lib/R/library/coda/R/coda.rdb:${PORTSDIR}/math/R-cran-coda
testclean: install
.for _i in 1 2
@( cd ${EXAMPLESDIR}/vol${_i} && ${SETENV} ${MAKE_ENV} ${MAKE} \
${_MAKE_JOBS} ${MAKE_ARGS} clean)
.endfor
regression-test test check: testclean
.for _i in 1 2
@( cd ${EXAMPLESDIR}/vol${_i} && ${SETENV} ${MAKE_ENV} ${MAKE} \
${_MAKE_JOBS} ${MAKE_ARGS} check)
.endfor
.endif
.include <bsd.port.mk>
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